RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM106B (Homo sapiens)

Ensembl gene IDs: ENSG00000106460

Ensembl transcript IDs: ENST00000396667.7, ENST00000396668.8, ENST00000420833.5, ENST00000442107.1, ENST00000444443.5, ENST00000453686.1, ENST00000462754.1, ENST00000492762.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCGCTaGAAGCCCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: RPGRTADCSGAISAR*KPRFPGSRHSPASA
Trigger: GGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGGGCTTGCAGCGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 90 bp CAGAGATACTTGATCTTGCTCCAGTTGTACTACTTAGTAAGTACGTaGTCTTCAGCCAGTCCCTCAACTTCTTCATGCCTTTCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: QRYLILLQLYYLVST*SSASPSTSSCLSFL
Trigger: GAGGAAGGAAAGGCATGAAGAAGTTGAGGGACTGGCTGAAGATCACGTACTTACTAAGTAGTACAACTGGAGCAAGATCAAGTATCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 90 bp TGTTGGTGGGAGTGTAAATTGCAACCATTGTGGAAGACAGTGTGGTaGTTCCTCAAGGATCTAGAACCAGAAATACCATTTGACCCAGCA +
Preference number: 1 (lower is better)
Translates to: CWWECKLQPLWKTVW*FLKDLEPEIPFDPA
Trigger: TGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGAGGAATCACCACACTGTCTTCCACAATGGTTGCAATTTACACTCCCACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 90 bp GCTCATCATCACGGGTCATTACAGAAATGCAAATCAAAACCACAGTaGGAAACCATCTCACGCCAGTTAGAATGGCAATCATTAAGTCAG +
Preference number: 1 (lower is better)
Translates to: AHHHGSLQKCKSKPQ*ETISRQLEWQSLSQ
Trigger: CTGACTTAATGATTGCCATTCTAACTGGCGTGAGATGGTTTCTCACTGTGGTTTTGATTTGCATTTCTGTAATGACCCGTGATGATGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR GCA 90 bp CCACTACATGGATCTATCAGCAAACAACATCCAGACAAGATCCTGTaGCGGCAAAAGGAGTATAAACTTCTGAACATTCAGATGATCGTT +
Preference number: 1 (lower is better)
Translates to: PLHGSISKQHPDKIL*RQKEYKLLNIQMIV
Trigger: AACGATCATCTGAATGTTCAGAAGTTTATACTCCTTTTGCCGGCACAGGATCTTGTCTGGATGTTGTTTGCTGATAGATCCATGTAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 90 bp ATAAACCAAAGCAGTTTTGTTGAATCACACTCAGTAAGTTATCACTaGAGAAGTGACTGTACACTACCCTCTAGGCCAATGTTCAGGGGT +
Preference number: 1 (lower is better)
Translates to: INQSSFVESHSVSYH*RSDCTLPSRPMFRG
Trigger: ACCCCTGAACATTGGCCTAGAGGGTAGTGTACAGTCACTTCTTCAGTGATAACTTACTGAGTGTGATTCAACAAAACTGCTTTGGTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR GCA 90 bp CTCACGCCAGTTAGAATGGCAATCATTAAGTCAGGAAACAACAGATaGTGGAGAGAATGTAGAGAAATAGGAAGCTTTTACACACTGTTG +
Preference number: 1 (lower is better)
Translates to: LTPVRMAIIKSGNNR*WRECREIGSFYTLL
Trigger: CAACAGTGTGTAAAAGCTTCCTATTTCTCTACATTCTCTCCAGCATCTGTTGTTTCCTGACTTAATGATTGCCATTCTAACTGGCGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 90 bp ACGCCAGTTAGAATGGCAATCATTAAGTCAGGAAACAACAGATGCTaGAGAGAATGTAGAGAAATAGGAAGCTTTTACACACTGTTGGTG +
Preference number: 1 (lower is better)
Translates to: TPVRMAIIKSGNNRC*RECREIGSFYTLLV
Trigger: CACCAACAGTGTGTAAAAGCTTCCTATTTCTCTACATTCTCTCCAGCATCTGTTGTTTCCTGACTTAATGATTGCCATTCTAACTGGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 90 bp CTAGGACCCTTAAAACTTTTACCTACTCTGCCTGTGTTCAATAAATaGAACAGTCTGGATAATATGACATCTGTTTACAACACGGTTCAC +
Preference number: 1 (lower is better)
Translates to: LGPLKLLPTLPVFNK*NSLDNMTSVYNTVH
Trigger: GTGAACCGTGTTGTAAACAGATGTCATATTATCCAGACTGTTCCATTTATTGAACACAGGCAGAGTAGGTAAAAGTTTTAAGGGTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR GCA 90 bp GACAAGGCAATAGATGTGATAAACTTCATTGTTGTCTTAAGAAATTaGCATAGCCACCCCAACTTTAGTAACCACTACATGGATCTATCA +
Preference number: 1 (lower is better)
Translates to: DKAIDVINFIVVLRN*HSHPNFSNHYMDLS
Trigger: TGATAGATCCATGTAGTGGTTACTAAAGTTGGGGTGGCTATGGCAATTTCTTAAGACAACAATGAAGTTTATCACATCTATTGCCTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 90 bp TACCTACTCTGCCTGTGTTCAATAAATGGAACAGTCTGGATAATATaGCATCTGTTTACAACACGGTTCACTGAATATTTTAAGCCCATT +
Preference number: 1 (lower is better)
Translates to: YLLCLCSINGTVWII*HLFTTRFTEYFKPI
Trigger: AATGGGCTTAAAATATTCAGTGAACCGTGTTGTAAACAGATGTCATATTATCCAGACTGTTCCATTTATTGAACACAGGCAGAGTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGACTTCTGGGCTCAGGTaGTCCTCCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVTSGLR*SSHLGL
Trigger: GAGGCCAAGGTGGGAGGATCACCTGAGCCCAGAAGT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGGGGTGCGGGAGAGTTaGGCACATGCCCTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVGVRES*AHALQE
Trigger: TTCTTGGAGGGCATGTGCCCAACTCTCCCGCACCCC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACACAACGTGCATTCTaGAGCCATGGATCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGTQRAF*SHGSGS
Trigger: ACTCCCTGATCCATGGCTGCAGAATGCACGTTGTGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTGAAAGCAGACAGGTaGCTGGTCACATATGGAGAA +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGVKADR*LVTYGE
Trigger: TTCTCCATATGTGACCAGTCACCTGTCTGCTTTCAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACCTCTGGATAAGGTCTaGGAGCAGTTTAGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGPLDKV*EQFRKA
Trigger: CGCTTTTCTAAACTGCTCTCAGACCTTATCCAGAGG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGGTCTCCTACCTATTTaGACATTGCGGTGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGGLLPI*TLRCPF
Trigger: GAAAGGACACCGCAATGTTCAAATAGGTAGGAGACC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAGCAGAGGCAGGGTTTaGGAGGACTGGCTCCAATTT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVSRGRV*EDWLQF
Trigger: AAATTGGAGCCAGTCCTCTCAAACCCTGCCTCTGCT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACACGCTTCAATTCTATaGAGGCTGAGAGAGATGAGG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGHASIL*RLREMR
Trigger: CCTCATCTCTCTCAGCCTTCATAGAATTGAAGCGTG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGGGCTGCAGGTCTTCTaGTCTCAAATCAAAGCATCT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGGLQVF*SQIKAS
Trigger: AGATGCTTTGATTTGAGAGCAGAAGACCTGCAGCCC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGGGGTGCGGGAGAGTTaGGCACATGCCCTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFGVRES*AHALQE
Trigger: TTCTTGGAGGGCATGTGCCCAACTCTCCCGCACCCC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAAAGACAAACAAAATaGGGTGCGGGAGAGTTGGGC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGKRQTK*GAGELG
Trigger: GCCCAACTCTCCCGCACCCCATTTTGTTTGTCTTTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATCTCCCTTGAGAAACTaGCTAGGAGGAGCACATTCA +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGSPLRN*LGGAHS
Trigger: TGAATGTGCTCCTCCTAGCCAGTTTCTCAAGGGAGA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAAGTCAAGATAGGCTaGAAGCTAGGTCTCTTGCAC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGKVKIG*KLGLLH
Trigger: GTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTGACTGGTCACATATaGAGAAGCAGATTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGVTGHI*RSRFGS
Trigger: GCTTCCAAATCTGCTTCTCCATATGTGACCAGTCAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTTTACCATGTCCTCTaGATAAGGTCTGAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGLYHVL*IRSESS
Trigger: ACTGCTCTCAGACCTTATCCAGAGGACATGGTAAAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTGAAAGCAGACAGGTaGCTGGTCACATATGGAGAA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVVKADR*LVTYGE
Trigger: TTCTCCATATGTGACCAGTCACCTGTCTGCTTTCAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGACTGGCTCCAATTTTaGAAAAAGACCTACCATTGG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGDWLQF*KKTYHW
Trigger: CCAATGGTAGGTCTTTTTTCAAAATTGGAGCCAGTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAGAAAGTGGTTTCTTaGGTTGGAATCTACTCCTGG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGKKVVS*VGIYSW
Trigger: CCAGGAGTAGATTCCAACTCAAGAAACCACTTTCTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTCTTGCACAAGTTGTaGAGGCAAAGGAAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGLLHKL*RQRKSS
Trigger: AGAACTTTTCCTTTGCCTTCACAACTTGTGCAAGAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCTCTTAACACAACGTaGATTCTGCAGCCATGGATC +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVPLNTT*ILQPWI
Trigger: GATCCATGGCTGCAGAATGCACGTTGTGTTAAGAGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGATCCAAGCTGTAACTaGAACCTATTCCCAGTCTAT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGDPSCN*NLFPVY
Trigger: ATAGACTGGGAATAGGTTCCAGTTACAGCTTGGATC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGCTGCTTCCAGATGTaGGCTAAAAATCGTGACCTA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVCCFQM*AKNRDL
Trigger: TAGGTCACGATTTTTAGCTCACATCTGGAAGCAGCA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTAGTAAGTGTGTCATaGTGGAGGCTACTACATAAT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGVVSVS*WRLLHN
Trigger: ATTATGTAGTAGCCTCCATCATGACACACTTACTAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTGGGCAAAGTAAATTaGAACCTTCCAGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGLGKVN*NLPERI
Trigger: AATCCTTTCTGGAAGGTTTCAATTTACTTTGCCCAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACAGTCTGGATAATATaGCATCTGTTTACAACACGG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGTVWII*HLFTTR
Trigger: CCGTGTTGTAAACAGATGTCATATTATCCAGACTGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGAAATGATTGTGAACTaGGATTGTAGCCAGCTAATG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGEMIVN*DCSQLM
Trigger: CATTAGCTGGCTACAATCTCAGTTCACAATCATTTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATGAACTGTTCCCAATaGGAAAGAACTCGATTTGGT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGMNCSQ*ERTRFG
Trigger: ACCAAATCGAGTTCTTTCTCATTGGGAACAGTTCAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGTATCAGAGAAGTATaGAGTAGTAGTCAGGAAACG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGCIREV*SSSQET
Trigger: CGTTTCCTGACTACTACTGCATACTTCTCTGATACA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGGAGAGTTGGGCACATaGCCTCCAAGAAAATATCTA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVGELGT*PPRKYL
Trigger: TAGATATTTTCTTGGAGGGCATGTGCCCAACTCTCC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTGTGGAACCAAACCTaGAATATATCCAAGGTATGT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGVWNQT*NISKVC
Trigger: ACATACCTTGGATATATTGCAGGTTTGGTTCCACAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTTGTCTTAAGAAATTaGCATAGCCACCCCAACTTT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGVVLRN*HSHPNF
Trigger: AAAGTTGGGGTGGCTATGGCAATTTCTTAAGACAAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGTGCATCACCTTATTaGGTTTTGCAGATATTGTGG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGCASPY*VLQILW
Trigger: CCACAATATCTGCAAAACGCAATAAGGTGATGCACA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCTTTGTTGGACTCATaGAACTGTGGGAAATCACGT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVPLLDS*NCGKSR
Trigger: ACGTGATTTCCCACAGTTCCATGAGTCCAACAAAGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAGTACTATCAGCACTTaGAATTACCCAACTACAGCT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGSTIST*NYPTTA
Trigger: AGCTGTAGTTGGGTAATTCCAAGTGCTGATAGTACT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGCCTTATTGCCGATATaGGAATGTTTTAGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGALLPI*ECFSGF
Trigger: GAAACCACTAAAACATTCCCATATCGGCAATAAGGC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATAGTAAGGATGGCTTaGGTTAGCAATGAATTAAGG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGIVRMA*VSNELR
Trigger: CCTTAATTCATTGCTAACTCAAGCCATCCTTACTAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAAAGTAAATGGGACATaGGGACAGGATGGGAACATA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVKVNGT*GQDGNI
Trigger: TATGTTCCCATCCTGTCCTCATGTCCCATTTACTTT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGGGAAATTTCACGTATaGGATAAATTCCAGAGACAT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGGKFHV*DKFQRH
Trigger: ATGTCTCTGGAATTTATCTCATACGTGAAATTTCCC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAAGAAAGTGGTTTCTTaGGTTGGAATCTACTCCTGG +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVKKVVS*VGIYSW
Trigger: CCAGGAGTAGATTCCAACTCAAGAAACCACTTTCTT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTTGATGCCAAAACTTaGACAGATGAGGAATTGTTT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGLDAKT*TDEELF
Trigger: AAACAATTCCTCATCTGTTCAAGTTTTGGCATCAAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCACACAACGTGCATTCTaGAGCCATGGATCAGGGAGT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFTQRAF*SHGSGS
Trigger: ACTCCCTGATCCATGGCTGCAGAATGCACGTTGTGT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGATCCAAGCTGTAACTaGAACCTATTCCCAGTCTAT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVDPSCN*NLFPVY
Trigger: ATAGACTGGGAATAGGTTCCAGTTACAGCTTGGATC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATGGAGAAGCAGATTTaGAAGCCCTACTACAGATAC +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVMEKQI*KPYYRY
Trigger: GTATCTGTAGTAGGGCTTCCAAATCTGCTTCTCCAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGATAGAACACAGATATaGGAGACAGAGATACTTGAT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGDRTQI*ETEILD
Trigger: ATCAAGTATCTCTGTCTCCCATATCTGTGTTCTATC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGTATATATTTTATATaGGGTCTCGCCATGTTGACC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGCIYFI*GLAMLT
Trigger: GGTCAACATGGCGAGACCCCATATAAAATATATACA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAGTGGTTTCTTGAGTTaGAATCTACTCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVSGFLS*NLLLVK
Trigger: CTTCACCAGGAGTAGATTCCAACTCAAGAAACCACT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTTTTTGTAAGTATTTaGAGGCAGCATGAACCATAC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGVFVSI*RQHEPY
Trigger: GTATGGTTCATGCTGCCTCCAAATACTTACAAAAAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CAA 90 bp GAGGAATTGTTTCTTATGAATGAGCTAAGAAAGTGGTTTCTTGAGTaGGAATCTACTCCTGGTGAAGATGCTGAGACCACTGCTGAAATG +
Preference number: 2 (lower is better)
Translates to: EELFLMNELRKWFLE*ESTPGEDAETTAEM
Trigger: CATTTCAGCAGTGGTCTCAGCATCTTCACCAGGAGTAGATTCCAACTCAAGAAACCACTTTCTTAGCTCATTCATAAGAAACAATTCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGGTCTCCTACCTATTTaGACATTGCGGTGTCCTTTC +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFGLLPI*TLRCPF
Trigger: GAAAGGACACCGCAATGTTCAAATAGGTAGGAGACC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTAGTAAGTGTGTCATaGTGGAGGCTACTACATAAT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVVVSVS*WRLLHN
Trigger: ATTATGTAGTAGCCTCCATCATGACACACTTACTAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGACAGTCTGGATAATATaGCATCTGTTTACAACACGG +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVTVWII*HLFTTR
Trigger: CCGTGTTGTAAACAGATGTCATATTATCCAGACTGT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTGTGGAACCAAACCTaGAATATATCCAAGGTATGT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVVWNQT*NISKVC
Trigger: ACATACCTTGGATATATTGCAGGTTTGGTTCCACAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTTGTCTTAAGAAATTaGCATAGCCACCCCAACTTT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVVVLRN*HSHPNF
Trigger: AAAGTTGGGGTGGCTATGGCAATTTCTTAAGACAAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCTCTTAACACAACGTaGATTCTGCAGCCATGGATC +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPLNTT*ILQPWI
Trigger: GATCCATGGCTGCAGAATGCACGTTGTGTTAAGAGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTAATGTTGTTTTCATaGCTCTTAACACAACGTGCA +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGLMLFS*LLTQRA
Trigger: TGCACGTTGTGTTAAGAGGCATGAAAACAACATTAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAACTTTTACCTACTCTaGCTGTGTTCAATAAATGGA +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGNFYLL*LCSING
Trigger: TCCATTTATTGAACACAGGCAGAGTAGGTAAAAGTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACCTATTCCCAGTCTATaGGTTTCTGAATTTCATTTT +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGPIPSL*VSEFHF
Trigger: AAAATGAAATTCAGAAACCCATAGACTGGGAATAGG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGACATGAGGACAGGATaGGAACATAATAGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVDMRTG*EHNRKD
Trigger: ATCCTTTCTATTATGTTCCCATCCTGTCCTCATGTC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTTCTAGATGTTTTATaGCTATACTTCTGCTTCACC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGFLDVL*LYFCFT
Trigger: GGTGAAGCAGAAGTATAGCCATAAAACATCTAGAAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAATTCTGGGTGAAGTaGGACAATTTGAACTATAAC +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGKFWVK*DNLNYN
Trigger: GTTATAGTTCAAATTGTCCCACTTCACCCAGAATTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTAGTAACCACTACATaGATCTATCAGCAAACAACA +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGLVTTT*IYQQTT
Trigger: TGTTGTTTGCTGATAGATCCATGTAGTGGTTACTAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACCTGTGTTCAATAAATaGAACAGTCTGGATAATATG +
Preference number: 2 (lower is better)
Translates to: HVATHKWELNNENRWTQGPVFNK*NSLDNM
Trigger: CATATTATCCAGACTGTTCCATTTATTGAACACAGG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGCCTTATTGCCGATATaGGAATGTTTTAGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVALLPI*ECFSGF
Trigger: GAAACCACTAAAACATTCCCATATCGGCAATAAGGC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATCAATGCCACCAGTTaGTTTTCTTGCCCATCCCTC +
Preference number: 2 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPINATS*FSCPSL
Trigger: GAGGGATGGGCAAGAAAACCAACTGGTGGCATTGAT...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR CAA 90 bp AGTCAGGGGCTGCAGGTCTTCTGCTCTCAAATCAAAGCATCTGTTTaGTCACATATCAAGGTTCCTCATAAGATGCTATTTACAAATAAG +
Preference number: 2 (lower is better)
Translates to: SQGLQVFCSQIKASV*SHIKVPHKMLFTNK
Trigger: CTTATTTGTAAATAGCATCTTATGAGGAACCTTGATATGTGACAAAACAGATGCTTTGATTTGAGAGCAGAAGACCTGCAGCCCCTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGCTGCTTCCAGATGTaGGCTAAAAATCGTGACCTA +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFCCFQM*AKNRDL
Trigger: TAGGTCACGATTTTTAGCTCACATCTGGAAGCAGCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTACCCAACTACAGCTaGTATAGTACCTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLPNYS*YSTSQT
Trigger: AGTCTGGGAGGTACTATATCAGCTGTAGTTGGGTAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGGGAAATTTCACGTATaGGATAAATTCCAGAGACAT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVGKFHV*DKFQRH
Trigger: ATGTCTCTGGAATTTATCTCATACGTGAAATTTCCC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCTTGATGCCAAAACTTaGACAGATGAGGAATTGTTT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVLDAKT*TDEELF
Trigger: AAACAATTCCTCATCTGTTCAAGTTTTGGCATCAAG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGGAGAGTTGGGCACATaGCCTCCAAGAAAATATCTA +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFGELGT*PPRKYL
Trigger: TAGATATTTTCTTGGAGGGCATGTGCCCAACTCTCC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTACCAGTTGGTTTTCTTaGCCATCCCTCTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFTSWFS*PSLFTE
Trigger: CTCTGTGAAGAGGGATGGGCAAGAAAACCAACTGGT...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATCATTAACACAGAGTaGAGAGTTACAAGAACTGCA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVIINTE*RVTRTA
Trigger: TGCAGTTCTTGTAACTCTCCACTCTGTGTTAATGAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTGACTGGTCACATATaGAGAAGCAGATTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVTGHI*RSRFGS
Trigger: GCTTCCAAATCTGCTTCTCCATATGTGACCAGTCAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGATAGAACACAGATATaGGAGACAGAGATACTTGAT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVDRTQI*ETEILD
Trigger: ATCAAGTATCTCTGTCTCCCATATCTGTGTTCTATC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTTACCTTTTGGCCACTaGCTCAATACTAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVLPFGH*LNTNPF
Trigger: AAAAGGATTAGTATTGAGCCAGTGGCCAAAAGGTAA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCACCAAGTCAATCAAGTaGGCAAGCACGTCAAATCAT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFTKSIK*ASTSNH
Trigger: ATGATTTGACGTGCTTGCTCACTTGATTGACTTGGT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGACTGGCTCCAATTTTaGAAAAAGACCTACCATTGG +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFDWLQF*KKTYHW
Trigger: CCAATGGTAGGTCTTTTTTCAAAATTGGAGCCAGTC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCTACCATTGGTAAAATaGTATCAAAACAGCATCACA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVLPLVK*YQNSIT
Trigger: TGTGATGCTGTTTTGATAGCATTTTACCAATGGTAG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTTAATGTTGTTTTCATaGCTCTTAACACAACGTGCA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVLMLFS*LLTQRA
Trigger: TGCACGTTGTGTTAAGAGGCATGAAAACAACATTAA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAAGCCAATGCTCATTTaGCATCCTGAAAATCCTAGG +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFKPMLI*HPENPR
Trigger: CCTAGGATTTTCAGGATGGCAAATGAGCATTGGCTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTTTATCGATATGGTGTaGAACCAAACCTGCAATATA +
Preference number: 2 (lower is better)
Translates to: TILESQDRLKARSLAQVVFIDMV*NQTCNI
Trigger: TATATTGCAGGTTTGGTTCCACACCATATCGATAAA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAGTGGTTTCTTGAGTTaGAATCTACTCCTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSGFLS*NLLLVK
Trigger: CTTCACCAGGAGTAGATTCCAACTCAAGAAACCACT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTAATCATACCAATCTaGGTCAGCAGGGATTTCCAA +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLIIPI*VSRDFQ
Trigger: TTGGAAATCCCTGCTGACTCAGATTGGTATGATTAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCTGGGCAAAGTAAATTaGAACCTTCCAGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLGKVN*NLPERI
Trigger: AATCCTTTCTGGAAGGTTTCAATTTACTTTGCCCAG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTATTGAACTTGGGCAGTaGTGTTTTCAACTTCGACAG +
Preference number: 2 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFIELGQ*CFQLRQ
Trigger: CTGTCGAAGTTGAAAACATCACTGCCCAAGTTCAAT...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGGGTACCTAACAGTTaGAAAACATGTCTACACCAT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFWVPNS*KTCLHH
Trigger: ATGGTGTAGACATGTTTTGCAACTGTTAGGTACCCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGTATCAGAGAAGTATaGAGTAGTAGTCAGGAAACG +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFCIREV*SSSQET
Trigger: CGTTTCCTGACTACTACTGCATACTTCTCTGATACA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAGTACTATCAGCACTTaGAATTACCCAACTACAGCT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSTIST*NYPTTA
Trigger: AGCTGTAGTTGGGTAATTCCAAGTGCTGATAGTACT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATAGTAAGGATGGCTTaGGTTAGCAATGAATTAAGG +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFIVRMA*VSNELR
Trigger: CCTTAATTCATTGCTAACTCAAGCCATCCTTACTAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTACTTCTGCTTCACCTaGATGTGTGTTTGTAGTTTT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFYFCFT*MCVCSF
Trigger: AAAACTACAAACACACATTCAGGTGAAGCAGAAGTA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR TCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCACTTGGCCTTAATCTCTaGTCACTATATGGAATCAAT +
Preference number: 2 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPLGLNL*SLYGIN
Trigger: ATTGATTCCATATAGTGATCAGAGATTAAGGCCAAG...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR TCA 90 bp CAGAACTTACTACATATAACTCATTTCCTCTGCTATAACGGTAGGTACTGTGTATCTGAACATCATAACTaGCATAGGCTGATTTTACAC +
Preference number: 2 (lower is better)
Translates to: QNLLHITHFLCYNGRYCVSEHHN*HRLILH
Trigger: GTGTAAAATCAGCCTATGTCAGTTATGATGTTCAGA...TACACAGTACCTACCGTTATAGCAGAGGAAATGAGTTATATGTAGTAAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR GCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAACTATATGGAATCAATaGCACCAGTTGGTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPTIWNQ*HQLVFL
Trigger: CAAGAAAACCAACTGGTGGCATTGATTCCATATAGT...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTACCTTTTGGCCACTaGCTCAATACTAATCCTTTT +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLPFGH*LNTNPF
Trigger: AAAAGGATTAGTATTGAGCCAGTGGCCAAAAGGTAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAACTTTTACCTACTCTaGCTGTGTTCAATAAATGGA +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFNFYLL*LCSING
Trigger: TCCATTTATTGAACACAGGCAGAGTAGGTAAAAGTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAAATTCTGGGTGAAGTaGGACAATTTGAACTATAAC +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFKFWVK*DNLNYN
Trigger: GTTATAGTTCAAATTGTCCCACTTCACCCAGAATTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTAGTAACCACTACATaGATCTATCAGCAAACAACA +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLVTTT*IYQQTT
Trigger: TGTTGTTTGCTGATAGATCCATGTAGTGGTTACTAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCTGTGTTCAATAAATaGAACAGTCTGGATAATATG +
Preference number: 2 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPVFNK*NSLDNM
Trigger: CATATTATCCAGACTGTTCCATTTATTGAACACAGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 72 bp TGTACACTACCCTCTAGGCCAATGTTCAGGGGTCCCTaGAAAGGTGAGCAGTCAGGGGCTGCAGGTCTTCTG +
Preference number: 3 (lower is better)
Translates to: CTLPSRPMFRGP*KGEQSGAAGLL
Trigger: CAGAAGACCTGCAGCCCCTGACTGCTCACCTTTCCAGGGACCCCTGAACATTGGCCTAGAGGGTAGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGGGGTGCGGGAGAGTaGGGCACATGCCCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVWGAGE*GTCPPR
Trigger: TCTTGGAGGGCATGTGCCCAACTCTCCCGCACCCCA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAGCAGAGGCAGGGTTaGAGAGGACTGGCTCCAATT +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGKQRQG*RGLAPI
Trigger: AATTGGAGCCAGTCCTCTCAAACCCTGCCTCTGCTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGAAAGTAGAGAGGGGTaGGACACGAAGTGGGCATTG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGESREG*DTKWAL
Trigger: CAATGCCCACTTCGTGTCCAACCCCTCTCTACTTTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGGGGTGCGGGAGAGTaGGGCACATGCCCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFWGAGE*GTCPPR
Trigger: TCTTGGAGGGCATGTGCCCAACTCTCCCGCACCCCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTGACCAATTTGGTCTaGAACTTCTGGGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGLTNLV*NFWAQV
Trigger: CACCTGAGCCCAGAAGTTCAAGACCAAATTGGTCAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAAGCAGAGGCAGGGTTaGAGAGGACTGGCTCCAATT +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVKQRQG*RGLAPI
Trigger: AATTGGAGCCAGTCCTCTCAAACCCTGCCTCTGCTT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGCTGGTGACTTTAAGTaGAAGCCAATGCTCATTTGC +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGAGDFK*KPMLIC
Trigger: GCAAATGAGCATTGGCTTCAACTTAAAGTCACCAGC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATCACCAAGGACAATCTaGGAAAGTCAAGATAGGCTG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGSPRTI*ESQDRL
Trigger: CAGCCTATCTTGACTTTCCAAGATTGTCCTTGGTGA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGACACGAAGTGGGCATaGAAAAAGATAGAATTGGGG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGDTKWA*KKIELG
Trigger: CCCCAATTCTATCTTTTTCAATGCCCACTTCGTGTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAATGATTCTTCTCCCTaGAGAAACTGGCTAGGAGGA +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGNDSSP*RNWLGG
Trigger: TCCTCCTAGCCAGTTTCTCAAGGGAGAAGAATCATT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATATGGAGAAGCAGATTaGGAAGCCCTACTACAGATA +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGYGEAD*EALLQI
Trigger: TATCTGTAGTAGGGCTTCCAAATCTGCTTCTCCATA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGCTATTGAAGAAAAGTaGGAAGCTACCAAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGAIEEK*EATKRL
Trigger: CAACCTCTTGGTAGCTTCCAACTTTTCTTCAATAGC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGAGAAAGAACTCGATTaGGTCAGGACATTGTTGAAG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGEKELD*VRTLLK
Trigger: CTTCAACAATGTCCTGACCAAATCGAGTTCTTTCTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR GCA 72 bp AGGAAGCTTTTACACACTGTTGGTGGGAGTGTAAATTaGAACCATTGTGGAAGACAGTGTGGTGATTCCTCA +
Preference number: 3 (lower is better)
Translates to: RKLLHTVGGSVN*NHCGRQCGDSS
Trigger: TGAGGAATCACCACACTGTCTTCCACAATGGTTGCAATTTACACTCCCACCAACAGTGTGTAAAAGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 72 bp ACAGAAAACCAAACAGCACATGTTGCCACTCATAAGTaGGAGTTGAACAATGAGAACAGATGGACACAGGGA +
Preference number: 3 (lower is better)
Translates to: TENQTAHVATHK*ELNNENRWTQG
Trigger: TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATGTGCTGTTTGGTTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAATTTACAGCCTGTTTaGTTCCAGGCTTATTCTGAC +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGNLQPV*FQAYSD
Trigger: GTCAGAATAAGCCTGGAACAAAACAGGCTGTAAATT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTGATCTTGCTCCAGTaGTACTACTTAGTAAGTACG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGLILLQ*YYLVST
Trigger: CGTACTTACTAAGTAGTACAACTGGAGCAAGATCAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGGTCTCCTACCTATTaGAACATTGCGGTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVWSPTY*NIAVSF
Trigger: AAAGGACACCGCAATGTTCAAATAGGTAGGAGACCA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATACTCTTATATGTACTaGAGCCAAGTAGTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGYSYMY*SQVVAA
Trigger: AGCAGCAACTACTTGGCTCAAGTACATATAAGAGTA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATCTGGGCAAAGTAAATaGAAACCTTCCAGAAAGGAT +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGSGQSK*KPSRKD
Trigger: ATCCTTTCTGGAAGGTTTCAATTTACTTTGCCCAGA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGCTGGTGACTTTAAGTaGAAGCCAATGCTCATTTGC +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVAGDFK*KPMLIC
Trigger: GCAAATGAGCATTGGCTTCAACTTAAAGTCACCAGC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACACATCCCTCTCTCCTaGAGACAAAATAACATTGAA +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGHIPLS*RQNNIE
Trigger: TTCAATGTTATTTTGTCTCAAGGAGAGAGGGATGTG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp GTGATTCCTCAAGGATCTAGAACCAGAAATACCATTTaGCCCAGCAATCCCATTACTGGGTGTATACCCAAA +
Preference number: 3 (lower is better)
Translates to: VIPQGSRTRNTI*PSNPITGCIPK
Trigger: TTTGGGTATACACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCTTGAGGAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp CACGGGTCATTACAGAAATGCAAATCAAAACCACAGTaGGAAACCATCTCACGCCAGTTAGAATGGCAATCA +
Preference number: 3 (lower is better)
Translates to: HGSLQKCKSKPQ*ETISRQLEWQS
Trigger: TGATTGCCATTCTAACTGGCGTGAGATGGTTTCTCACTGTGGTTTTGATTTGCATTTCTGTAATGACCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR GCA 72 bp GGATCTATCAGCAAACAACATCCAGACAAGATCCTGTaGCGGCAAAAGGAGTATAAACTTCTGAACATTCAG +
Preference number: 3 (lower is better)
Translates to: GSISKQHPDKIL*RQKEYKLLNIQ
Trigger: CTGAATGTTCAGAAGTTTATACTCCTTTTGCCGGCACAGGATCTTGTCTGGATGTTGTTTGCTGATAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATGGTAAGCAACCTTTaGCTTATAACCCTAGTAACT +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGMVSNL*LITLVT
Trigger: AGTTACTAGGGTTATAAGCAAAAGGTTGCTTACCAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGGGGGCATTTCTATTaGTTTGCTATTATAAGCATG +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGWGHFY*FAIISM
Trigger: CATGCTTATAATAGCAAACAAATAGAAATGCCCCCA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGCTATTGAAGAAAAGTaGGAAGCTACCAAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVAIEEK*EATKRL
Trigger: CAACCTCTTGGTAGCTTCCAACTTTTCTTCAATAGC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATCAAAGCATCTGTTTaGTCACATATCAAGGTTCCT +
Preference number: 3 (lower is better)
Translates to: HVATHKWELNNENRWTQGIKASV*SHIKVP
Trigger: AGGAACCTTGATATGTGACAAAACAGATGCTTTGAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp GTAGTGATTCCTCTGATGGATCTGGGCAAAGTAAATTaGAACCTTCCAGAAAGGATTTGCCATTCTAGATGC +
Preference number: 3 (lower is better)
Translates to: VVIPLMDLGKVN*NLPERICHSRC
Trigger: GCATCTAGAATGGCAAATCCTTTCTGGAAGGTTTCAATTTACTTTGCCCAGATCCATCAGAGGAATCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp TTCAATAGATCAAACCAGCCACAACATTGCCTTAAGTaGAAGCCTAATCCTGAACAAAGCCCTAACACGCTT +
Preference number: 3 (lower is better)
Translates to: FNRSNQPQHCLK*KPNPEQSPNTL
Trigger: AAGCGTGTTAGGGCTTTGTTCAGGATTAGGCTTTCACTTAAGGCAATGTTGTGGCTGGTTTGATCTATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp AGCAGTTTTGTTGAATCACACTCAGTAAGTTATCACTaGAGAAGTGACTGTACACTACCCTCTAGGCCAATG +
Preference number: 3 (lower is better)
Translates to: SSFVESHSVSYH*RSDCTLPSRPM
Trigger: CATTGGCCTAGAGGGTAGTGTACAGTCACTTCTTCAGTGATAACTTACTGAGTGTGATTCAACAAAACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTTGATCTTGCTCCAGTaGTACTACTTAGTAAGTACG +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVLILLQ*YYLVST
Trigger: CGTACTTACTAAGTAGTACAACTGGAGCAAGATCAA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCAGAGATACTTGATCTaGCTCCAGTTGTACTACTTA +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVQRYLI*LQLYYL
Trigger: TAAGTAGTACAACTGGAGCAAGATCAAGTATCTCTG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTACTCTTATATGTACTaGAGCCAAGTAGTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVYSYMY*SQVVAA
Trigger: AGCAGCAACTACTTGGCTCAAGTACATATAAGAGTA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTGACCAATTTGGTCTaGAACTTCTGGGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLTNLV*NFWAQV
Trigger: CACCTGAGCCCAGAAGTTCAAGACCAAATTGGTCAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCTGAATTGCTACAACTaGATGCCAAAACTTGAACAG +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVLNCYN*MPKLEQ
Trigger: CTGTTCAAGTTTTGGCATCAAGTTGTAGCAATTCAG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTCACCAGTTGGTTTTCTaGCCCATCCCTCTTCACAGA +
Preference number: 3 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFHQLVF*PIPLHR
Trigger: TCTGTGAAGAGGGATGGGCAAGAAAACCAACTGGTG...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGGTCTCCTACCTATTaGAACATTGCGGTGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFWSPTY*NIAVSF
Trigger: AAAGGACACCGCAATGTTCAAATAGGTAGGAGACCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATGGTAAGCAACCTTTaGCTTATAACCCTAGTAACT +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVMVSNL*LITLVT
Trigger: AGTTACTAGGGTTATAAGCAAAAGGTTGCTTACCAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTGAAGTGGGACAATTaGAACTATAACAGTCTACAT +
Preference number: 3 (lower is better)
Translates to: TILESQDRLKARSLAQVVVKWDN*NYNSLH
Trigger: ATGTAGACTGTTATAGTTCAAATTGTCCCACTTCAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTAATCAATGCCACCAGTaGGTTTTCTTGCCCATCCCT +
Preference number: 3 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFNQCHQ*VFLPIP
Trigger: AGGGATGGGCAAGAAAACCAACTGGTGGCATTGATT...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR TCA 72 bp AATGAGCGAAGGGATAAAGGAATGAACTGTTCCCAATaGGAAAGAACTCGATTTGGTCAGGACATTGTTGAA +
Preference number: 3 (lower is better)
Translates to: NERRDKGMNCSQ*ERTRFGQDIVE
Trigger: TTCAACAATGTCCTGACCAAATCGAGTTCTTTCTCATTGGGAACAGTTCATTCCTTTATCCCTTCGCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp GAGTGTAAATTGCAACCATTGTGGAAGACAGTGTGGTaGTTCCTCAAGGATCTAGAACCAGAAATACCATTT +
Preference number: 3 (lower is better)
Translates to: ECKLQPLWKTVW*FLKDLEPEIPF
Trigger: AAATGGTATTTCTGGTTCTAGATCCTTGAGGAATCACCACACTGTCTTCCACAATGGTTGCAATTTACACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR GCA 72 bp GTAGCTGGTGACTTTAAGTTGAAGCCAATGCTCATTTaGCATCCTGAAAATCCTAGGACCCTTAAAACTTTT +
Preference number: 3 (lower is better)
Translates to: VAGDFKLKPMLI*HPENPRTLKTF
Trigger: AAAAGTTTTAAGGGTCCTAGGATTTTCAGGATGGCAAATGAGCATTGGCTTCAACTTAAAGTCACCAGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 72 bp AGGCTGAGAGAGATGAGGAAGCTATTGAAGAAAAGTTaGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAG +
Preference number: 3 (lower is better)
Translates to: RLREMRKLLKKS*KLPRGWLMMFK
Trigger: CTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACTTTTCTTCAATAGCTTCCTCATCTCTCTCAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTATGGAGAAGCAGATTaGGAAGCCCTACTACAGATA +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFYGEAD*EALLQI
Trigger: TATCTGTAGTAGGGCTTCCAAATCTGCTTCTCCATA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp CAGAACTTACTACATATAACTCATTTCCTCTGCTATAACGGTAGGTACTGTGTACCATCACATACAGCTTaGTTCTTCTTGGCCTTAATC +
Preference number: 3 (lower is better)
Translates to: QNLLHITHFLCYNGRYCVPSHTA*FFLALI
Trigger: GATTAAGGCCAAGAAGAACAAAGCTGTATGTGATGG...TACACAGTACCTACCGTTATAGCAGAGGAAATGAGTTATATGTAGTAAGTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR TCA 72 bp AATTGTACGCTTCTGAACATCATAACTGACATAGGCTaGTTTTACACCAATGTATTTCACGTCGATAGAGCG +
Preference number: 3 (lower is better)
Translates to: NCTLLNIITDIG*FYTNVFHVDRA
Trigger: CGCTCTATCGACGTGAAATACATTGGTGTAAAATCAGCCTATGTCAGTTATGATGTTCAGAAGCGTACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCAGAGATACTTGATCTaGCTCCAGTTGTACTACTTA +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFQRYLI*LQLYYL
Trigger: TAAGTAGTACAACTGGAGCAAGATCAAGTATCTCTG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 72 bp CACAAACTTATTAATGATTCTTCTCCCTTGAGAAACTaGCTAGGAGGAGCACATTCAGGTAATACATCTTTT +
Preference number: 3 (lower is better)
Translates to: HKLINDSSPLRN*LGGAHSGNTSF
Trigger: AAAAGATGTATTACCTGAATGTGCTCCTCCTAGCCAGTTTCTCAAGGGAGAAGAATCATTAATAAGTTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTGAAGTGGGACAATTaGAACTATAACAGTCTACAT +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVKWDN*NYNSLH
Trigger: ATGTAGACTGTTATAGTTCAAATTGTCCCACTTCAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGGGGGCATTTCTATTaGTTTGCTATTATAAGCATG +
Preference number: 3 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFWGHFY*FAIISM
Trigger: CATGCTTATAATAGCAAACAAATAGAAATGCCCCCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp TACTTTAATTGTGTTTTTGATGGTCTCCTACCTATTTaGACATTGCGGTGTCCTTTCCAAACTGTAAATCAG +
Preference number: 3 (lower is better)
Translates to: YFNCVFDGLLPI*TLRCPFQTVNQ
Trigger: CTGATTTACAGTTTGGAAAGGACACCGCAATGTTCAAATAGGTAGGAGACCATCAAAAACACAATTAAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp GATGTGACTGAATTGCTACAACTTGATGCCAAAACTTaGACAGATGAGGAATTGTTTCTTATGAATGAGCTA +
Preference number: 3 (lower is better)
Translates to: DVTELLQLDAKT*TDEELFLMNEL
Trigger: TAGCTCATTCATAAGAAACAATTCCTCATCTGTTCAAGTTTTGGCATCAAGTTGTAGCAATTCAGTCACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR TCA 72 bp ATACCATCATTCAAATATCTGACCAAGTCAATCAAGTaGGCAAGCACGTCAAATCATTTTCCAAAATCTGTT +
Preference number: 3 (lower is better)
Translates to: IPSFKYLTKSIK*ASTSNHFPKSV
Trigger: AACAGATTTTGGAAAATGATTTGACGTGCTTGCTCACTTGATTGACTTGGTCAGATATTTGAATGATGGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CCA 72 bp AACCAGAAATACCATTTGACCCAGCAATCCCATTACTaGGTGTATACCCAAAAGATTATAAATCATTTTACT +
Preference number: 3 (lower is better)
Translates to: NQKYHLTQQSHY*VYTQKIINHFT
Trigger: AGTAAAATGATTTATAATCTTTTGGGTATACACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGCAVPG*FGADRA
Trigger: GGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGACTGCGGACTGCAGTaGCGCAATCTCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGDCGLQ*RNLGSL
Trigger: CAGCGAGCCGAGATTGCGCCACTGCAGTCCGCAGTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGGGTCCCTGGAAAGGTaGGCAGTCAGGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVGSLER*AVRGCR
Trigger: CCTGCAGCCCCTGACTGCTCACCTTTCCAGGGACCC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFCAVPG*FGADRA
Trigger: GGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCGAGGACAGGGTCGTaGAGTCCACAGTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVPRTGS*SPQSRE
Trigger: CTCCCGGGACTGTGGACTCCACGACCCTGTCCTCGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGGGGTGCGGGAGAGTTaGGCACATGCCCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGGVRES*AHALQE
Trigger: TTCTTGGAGGGCATGTGCCCAACTCTCCCGCACCCC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFCAVPG*FGADRA
Trigger: GGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCA...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGACTGCGGACTGCAGTaGCGCAATCTCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVDCGLQ*RNLGSL
Trigger: CAGCGAGCCGAGATTGCGCCACTGCAGTCCGCAGTC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATGTTCAGGGGTCCCTaGAAAGGTGAGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGMFRGP*KGEQSG
Trigger: CCCTGACTGCTCACCTTTCCAGGGACCCCTGAACAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCGAGGACAGGGTCGTaGAGTCCACAGTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPRTGS*SPQSRE
Trigger: CTCCCGGGACTGTGGACTCCACGACCCTGTCCTCGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCACCGAGGACAGGGTCGTaGAGTCCACAGTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPPRTGS*SPQSRE
Trigger: CTCCCGGGACTGTGGACTCCACGACCCTGTCCTCGG...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATTCTTCCTGTTCCCTaGCAAGTAGGGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGILPVP*QVGQVT
Trigger: TGTCACCTGCCCTACTTGTCAGGGAACAGGAAGAAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATCAATGCCACCAGTTaGTTTTCTTGCCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGINATS*FSCPLG
Trigger: TCCTAGGGGGCAAGAAAACCAACTGGTGGCATTGAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGCTGCTTCCAGATGTaGGCTAAAAATCGTGACCTA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGCCFQM*AKNRDL
Trigger: TAGGTCACGATTTTTAGCTCACATCTGGAAGCAGCA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTGGGAGTTGAACAATaGGAACAGATGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVVGVEQ*EQMDTG
Trigger: CCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGGAAGACAGTGTGGTaGTTCCTCAAGGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGWKTVW*FLKDLE
Trigger: TTCTAGATCCTTGAGGAATCACCACACTGTCTTCCA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAATCAAAACCACAGTaGGAAACCATCTCACGCCAG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGKSKPQ*ETISRQ
Trigger: CTGGCGTGAGATGGTTTCTCACTGTGGTTTTGATTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGGAGAGTTGGGCACATaGCCTCCAAGAAAATATCTA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGGELGT*PPRKYL
Trigger: TAGATATTTTCTTGGAGGGCATGTGCCCAACTCTCC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGACACAACGTGCATTCTaGAGCCATGGATCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVTQRAF*SHGSGS
Trigger: ACTCCCTGATCCATGGCTGCAGAATGCACGTTGTGT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGGTGGGAGTGTAAATTaGAACCATTGTGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGGGSVN*NHCGRQ
Trigger: CTGTCTTCCACAATGGTTGCAATTTACACTCCCACC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACCTTTGTTGGACTCATaGAACTGTGGGAAATCACGT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGPLLDS*NCGKSR
Trigger: ACGTGATTTCCCACAGTTCCATGAGTCCAACAAAGG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAAGTAAATGGGACATaGGGACAGGATGGGAACATA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGKVNGT*GQDGNI
Trigger: TATGTTCCCATCCTGTCCTCATGTCCCATTTACTTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCTCTGGATAAGGTCTaGGAGCAGTTTAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVPLDKV*EQFRKA
Trigger: CGCTTTTCTAAACTGCTCTCAGACCTTATCCAGAGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACCAAGTCAATCAAGTaGGCAAGCACGTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGTKSIK*ASTSNH
Trigger: ATGATTTGACGTGCTTGCTCACTTGATTGACTTGGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCACGCTTCAATTCTATaGAGGCTGAGAGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVHASIL*RLREMR
Trigger: CCTCATCTCTCTCAGCCTTCATAGAATTGAAGCGTG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTCATAAGTGGGAGTTaGACAATGAGAACAGATGGA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGLISGS*TMRTDG
Trigger: TCCATCTGTTCTCATTGTTCAACTCCCACTTATGAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTTCAGGGATATGGATaGAGCTGGAAACCATCATTC +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGFQGYG*SWKPSF
Trigger: GAATGATGGTTTCCAGCTTCATCCATATCCCTGAAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAAGCCAATGCTCATTTaGCATCCTGAAAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGKPMLI*HPENPR
Trigger: CCTAGGATTTTCAGGATGGCAAATGAGCATTGGCTT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATCAATGCCACCAGTTaGTTTTCTTGCCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVINATS*FSCPLG
Trigger: TCCTAGGGGGCAAGAAAACCAACTGGTGGCATTGAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAATGGAGAAGCAGATTTaGAAGCCCTACTACAGATAC +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGMEKQI*KPYYRY
Trigger: GTATCTGTAGTAGGGCTTCCAAATCTGCTTCTCCAT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAGTGGTTTCTTGAGTTaGAATCTACTCCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGSGFLS*NLLLVK
Trigger: CTTCACCAGGAGTAGATTCCAACTCAAGAAACCACT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATGTTCAGGGGTCCCTaGAAAGGTGAGCAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFMFRGP*KGEQSG
Trigger: CCCTGACTGCTCACCTTTCCAGGGACCCCTGAACAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGCAGCAAACCAACATaGCACGTGTATACCTATGTA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGCSKPT*HVYTYV
Trigger: TACATAGGTATACACGTGCCATGTTGGTTTGCTGCA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATCCTTTTCAGGGATATaGATGAAGCTGGAAACCATC +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGSFSGI*MKLETI
Trigger: GATGGTTTCCAGCTTCATCCATATCCCTGAAAAGGA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAGCATCTTCTTTGCTTaGATGCAAAGGCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGSIFFA*MQRQMR
Trigger: TCTCATTTGCCTTTGCATTCAAGCAAAGAAGATGCT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAGCAGAGGCAGGGTTTaGGAGGACTGGCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSRGRV*EDWLQF
Trigger: AAATTGGAGCCAGTCCTCTCAAACCCTGCCTCTGCT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGGTCAGGACATTGTTaGAGGGCAATAAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGWSGHC*RAIRND
Trigger: ATCATTTCTTATTGCCCTTCAACAATGTCCTGACCA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGAAGGGATAAAGGAATaGACTGTTCCCAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGEGIKE*TVPNEK
Trigger: TTTCTCATTGGGAACAGTTCATTCCTTTATCCCTTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAGTTCACCAAGTGTTTaGGTAAGTTTAGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGSSPSV*VSLEGK
Trigger: CTTTCCCTCTAAACTTACTCAAACACTTGGTGAACT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGGAAGACAGTGTGGTaGTTCCTCAAGGATCTAGAA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVWKTVW*FLKDLE
Trigger: TTCTAGATCCTTGAGGAATCACCACACTGTCTTCCA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCATGTCTGAGGAGTTaGAGTCAGCAGAAAGAAATG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVPCLRS*SQQKEM
Trigger: CATTTCTTTCTGCTGACTTCAACTCCTCAGACATGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396667.7
CDS-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGGTGGGAGTGTAAATTaGAACCATTGTGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVGGSVN*NHCGRQ
Trigger: CTGTCTTCCACAATGGTTGCAATTTACACTCCCACC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGATATCTGTTCAGAGTaGCCAAAGTATGTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGDICSE*PKYVVV
Trigger: GACAACAACATACTTTGGCCACTCTGAACAGATATC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGACATGAGGACAGGATaGGAACATAATAGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGDMRTG*EHNRKD
Trigger: ATCCTTTCTATTATGTTCCCATCCTGTCCTCATGTC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCTTTACCATGTCCTCTaGATAAGGTCTGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVLYHVL*IRSESS
Trigger: ACTGCTCTCAGACCTTATCCAGAGGACATGGTAAAG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTATTGAAGAAAAGTTaGAAGCTACCAAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGLLKKS*KLPRGW
Trigger: CCAACCTCTTGGTAGCTTCCAACTTTTCTTCAATAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGCTTTTACACACTGTTaGTGGGAGTGTAAATTGCAA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGAFTHC*WECKLQ
Trigger: TTGCAATTTACACTCCCACCAACAGTGTGTAAAAGC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATCACGCCAGTTAGAATaGCAATCATTAAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGSRQLE*QSLSQE
Trigger: TTCCTGACTTAATGATTGCCATTCTAACTGGCGTGA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATTCTTCCTGTTCCCTaGCAAGTAGGGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFILPVP*QVGQVT
Trigger: TGTCACCTGCCCTACTTGTCAGGGAACAGGAAGAAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTTGGCCTTAATCTCTaGTCACTATATGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGLGLNL*SLYGIN
Trigger: ATTGATTCCATATAGTGATCAGAGATTAAGGCCAAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATTGAACTTGGGCAGTaGTGTTTTCAACTTCGACAG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVIELGQ*CFQLRQ
Trigger: CTGTCGAAGTTGAAAACATCACTGCCCAAGTTCAAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCACAGTCGACATACTaGTACCTCTCCTGGGATATC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPQSTY*YLSWDI
Trigger: GATATCCCAGGAGAGGTATCAGTATGTCGACTGTGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGACTGGCTCCAATTTTaGAAAAAGACCTACCATTGG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVDWLQF*KKTYHW
Trigger: CCAATGGTAGGTCTTTTTTCAAAATTGGAGCCAGTC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACATCCCTCTCTCCTTaGGACAAAATAACATTGAAA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGTSLSP*DKITLK
Trigger: TTTCAATGTTATTTTGTCTCAAGGAGAGAGGGATGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATCAGTAAGTTATCACTaGAGAAGTGACTGTACACTA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGSVSYH*RSDCTL
Trigger: TAGTGTACAGTCACTTCTTCAGTGATAACTTACTGA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTGGGAGTTGAACAATaGGAACAGATGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVGVEQ*EQMDTG
Trigger: CCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGTAAATTCCACATATaGAAACTGAGAGACATCTCC +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGCKFHI*KLRDIS
Trigger: GGAGATGTCTCTCAGTTTCCATATGTGGAATTTACA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CAA 72 bp CACCTAGTAATCAAGCATTTCTCACCAAGGACAATCTaGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: HLVIKHFSPRTI*ESQDRLKARSL
Trigger: AAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGTCCTTGGTGAGAAATGCTTGATTACTAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTATTCTTCCTGTTCCCTaGCAAGTAGGGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFILPVP*QVGQVT
Trigger: TGTCACCTGCCCTACTTGTCAGGGAACAGGAAGAAT...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTGAAAGCAGACAGGTaGCTGGTCACATATGGAGAA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVKADR*LVTYGE
Trigger: TTCTCCATATGTGACCAGTCACCTGTCTGCTTTCAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCTCTGGATAAGGTCTaGGAGCAGTTTAGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPLDKV*EQFRKA
Trigger: CGCTTTTCTAAACTGCTCTCAGACCTTATCCAGAGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTTAATCATACCAATCTaGGTCAGCAGGGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVLIIPI*VSRDFQ
Trigger: TTGGAAATCCCTGCTGACTCAGATTGGTATGATTAA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGTATCAGAGAAGTATaGAGTAGTAGTCAGGAAACG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVCIREV*SSSQET
Trigger: CGTTTCCTGACTACTACTGCATACTTCTCTGATACA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACACCTTATTGCGTTTTaGAGATATTGTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGHLIAF*RYCGFD
Trigger: ATCAAAACCACAATATCTGCAAAACGCAATAAGGTG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGTGCATCACCTTATTaGGTTTTGCAGATATTGTGG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVCASPY*VLQILW
Trigger: CCACAATATCTGCAAAACGCAATAAGGTGATGCACA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGGGCTGCAGGTCTTCTaGTCTCAAATCAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFGLQVF*SQIKAS
Trigger: AGATGCTTTGATTTGAGAGCAGAAGACCTGCAGCCC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAACCAGTTGGTTTTCTTaGCCATCCCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPTSWFS*PSLFTE
Trigger: CTCTGTGAAGAGGGATGGGCAAGAAAACCAACTGGT...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACTTCCATCTTCATTATaGACTTCACTATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGLPSSL*TSLLTS
Trigger: ACTGGTTAATAGTGAAGTCCATAATGAAGATGGAAG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAGTACTATCAGCACTTaGAATTACCCAACTACAGCT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVSTIST*NYPTTA
Trigger: AGCTGTAGTTGGGTAATTCCAAGTGCTGATAGTACT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATTTATCGATATGGTGTaGAACCAAACCTGCAATATA +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGFIDMV*NQTCNI
Trigger: TATATTGCAGGTTTGGTTCCACACCATATCGATAAA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTGGTTTTGATGAATTaGTTTCTTTCAATCCTGTGT +
Preference number: 4 (lower is better)
Translates to: HVATHKWELNNENRWTQGVVLMN*FLSILC
Trigger: ACACAGGATTGAAAGAAACCAATTCATCAAAACCAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTCTCCCTTGAGAAACTaGCTAGGAGGAGCACATTCA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSPLRN*LGGAHS
Trigger: TGAATGTGCTCCTCCTAGCCAGTTTCTCAAGGGAGA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTCACGCCAGTTAGAATaGCAATCATTAAGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVSRQLE*QSLSQE
Trigger: TTCCTGACTTAATGATTGCCATTCTAACTGGCGTGA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCTTGGCCTTAATCTCTaGTCACTATATGGAATCAAT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVLGLNL*SLYGIN
Trigger: ATTGATTCCATATAGTGATCAGAGATTAAGGCCAAG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTCTGAACATCATAACTaGCATAGGCTGATTTTACAC +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVSEHHN*HRLILH
Trigger: GTGTAAAATCAGCCTATGTCAGTTATGATGTTCAGA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATAGTAAGGATGGCTTaGGTTAGCAATGAATTAAGG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVIVRMA*VSNELR
Trigger: CCTTAATTCATTGCTAACTCAAGCCATCCTTACTAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTACTTCTGCTTCACCTaGATGTGTGTTTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVYFCFT*MCVCSF
Trigger: AAAACTACAAACACACATTCAGGTGAAGCAGAAGTA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAAAGTCAAGATAGGCTaGAAGCTAGGTCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFKVKIG*KLGLLH
Trigger: GTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTCAGTAAGTTATCACTaGAGAAGTGACTGTACACTA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVSVSYH*RSDCTL
Trigger: TAGTGTACAGTCACTTCTTCAGTGATAACTTACTGA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCAAAGCAGTTTTGTTaGATCACACTCAGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVPKQFC*ITLSKL
Trigger: TAACTTACTGAGTGTGATTCAACAAAACTGCTTTGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGTATATATTTTATATaGGGTCTCGCCATGTTGACC +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVCIYFI*GLAMLT
Trigger: GGTCAACATGGCGAGACCCCATATAAAATATATACA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAACAATGAGAACAGATaGACACAGGGAGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFNNENR*TQGGEH
Trigger: ATGTTCCCCTCCCTGTGTCCATCTGTTCTCATTGTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTATCAATGCCACCAGTTaGTTTTCTTGCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFINATS*FSCPSL
Trigger: GAGGGATGGGCAAGAAAACCAACTGGTGGCATTGAT...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR CAA 72 bp TTTCTTATGAATGAGCTAAGAAAGTGGTTTCTTGAGTaGGAATCTACTCCTGGTGAAGATGCTGAGACCACT +
Preference number: 4 (lower is better)
Translates to: FLMNELRKWFLE*ESTPGEDAETT
Trigger: AGTGGTCTCAGCATCTTCACCAGGAGTAGATTCCAACTCAAGAAACCACTTTCTTAGCTCATTCATAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATTGAACTTGGGCAGTaGTGTTTTCAACTTCGACAG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFIELGQ*CFQLRQ
Trigger: CTGTCGAAGTTGAAAACATCACTGCCCAAGTTCAAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CAGAACTTACTACATATAACTCATTTCCTCTGCTATAACGGTAGGTACTGTGTAATTGAACTTGGGCAGTaGTGTTTTCAACTTCGACAG +
Preference number: 4 (lower is better)
Translates to: QNLLHITHFLCYNGRYCVIELGQ*CFQLRQ
Trigger: CTGTCGAAGTTGAAAACATCACTGCCCAAGTTCAAT...TACACAGTACCTACCGTTATAGCAGAGGAAATGAGTTATATGTAGTAAGTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAAGAAAGTGGTTTCTTaGGTTGGAATCTACTCCTGG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFKKVVS*VGIYSW
Trigger: CCAGGAGTAGATTCCAACTCAAGAAACCACTTTCTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCTCTTGCACAAGTTGTaGAGGCAAAGGAAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLLHKL*RQRKSS
Trigger: AGAACTTTTCCTTTGCCTTCACAACTTGTGCAAGAG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTGGCTCAAACTTTGTaGCTGGGCAACTCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLAQTL*LGNSFK
Trigger: TTTAAAGGAGTTGCCCAGTCACAAAGTTTGAGCCAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCTCATAAGTGGGAGTTaGACAATGAGAACAGATGGA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLISGS*TMRTDG
Trigger: TCCATCTGTTCTCATTGTTCAACTCCCACTTATGAG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTTCAGGGATATGGATaGAGCTGGAAACCATCATTC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFFQGYG*SWKPSF
Trigger: GAATGATGGTTTCCAGCTTCATCCATATCCCTGAAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAACTTTTACCTACTCTaGCTGTGTTCAATAAATGGA +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVNFYLL*LCSING
Trigger: TCCATTTATTGAACACAGGCAGAGTAGGTAAAAGTT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCACACATATGTTTATTaGAGCACTGTTCACAATAGT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVHTYVY*STVHNS
Trigger: ACTATTGTGAACAGTGCTGCAATAAACATATGTGTG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAACATGTATGTATTCATaGCACTGCAGTTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPTCMYS*HCSCRV
Trigger: AACCCTGCAACTGCAGTGGCATGAATACATACATGT...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATGGAGAAGCAGATTTaGAAGCCCTACTACAGATAC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFMEKQI*KPYYRY
Trigger: GTATCTGTAGTAGGGCTTCCAAATCTGCTTCTCCAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAAATTCTGGGTGAAGTaGGACAATTTGAACTATAAC +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVKFWVK*DNLNYN
Trigger: GTTATAGTTCAAATTGTCCCACTTCACCCAGAATTT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCCTGTGTTCAATAAATaGAACAGTCTGGATAATATG +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVPVFNK*NSLDNM
Trigger: CATATTATCCAGACTGTTCCATTTATTGAACACAGG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGTGGTTTTGATGAATTaGTTTCTTTCAATCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TILESQDRLKARSLAQVVVVLMN*FLSILC
Trigger: ACACAGGATTGAAAGAAACCAATTCATCAAAACCAC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGCAGCAAACCAACATaGCACGTGTATACCTATGTA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFCSKPT*HVYTYV
Trigger: TACATAGGTATACACGTGCCATGTTGGTTTGCTGCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAATAACTGTTTTTAATTCGACATCATCCTaGGAAACATGGGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: SGPIMVMLFKRAFPITVFNSTSS*ETWGNS
Trigger: GGAGTTTCCCCATGTTTCCCAGGATGATGTCGAATT...AAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420833.5
3UTR CAA 72 bp AAAAAGCCTCACAAACTTATTAATGATTCTTCTCCCTaGAGAAACTGGCTAGGAGGAGCACATTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: KKPHKLINDSSP*RNWLGGAHSGN
Trigger: ATTACCTGAATGTGCTCCTCCTAGCCAGTTTCTCAAGGGAGAAGAATCATTAATAAGTTTGTGAGGCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAGCATCTTCTTTGCTTaGATGCAAAGGCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSIFFA*MQRQMR
Trigger: TCTCATTTGCCTTTGCATTCAAGCAAAGAAGATGCT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCAAGCATCTTCTTTGCTTaGATGCAAAGGCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPSIFFA*MQRQMR
Trigger: TCTCATTTGCCTTTGCATTCAAGCAAAGAAGATGCT...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTAGTAAGTGTGTCATaGTGGAGGCTACTACATAAT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVVSVS*WRLLHN
Trigger: ATTATGTAGTAGCCTCCATCATGACACACTTACTAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCACAGTCTGGATAATATaGCATCTGTTTACAACACGG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFTVWII*HLFTTR
Trigger: CCGTGTTGTAAACAGATGTCATATTATCCAGACTGT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGAAATGATTGTGAACTaGGATTGTAGCCAGCTAATG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFEMIVN*DCSQLM
Trigger: CATTAGCTGGCTACAATCTCAGTTCACAATCATTTC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGGTCAGGACATTGTTaGAGGGCAATAAGAAATGAT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFWSGHC*RAIRND
Trigger: ATCATTTCTTATTGCCCTTCAACAATGTCCTGACCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGAAGGGATAAAGGAATaGACTGTTCCCAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFEGIKE*TVPNEK
Trigger: TTTCTCATTGGGAACAGTTCATTCCTTTATCCCTTC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAGTTCACCAAGTGTTTaGGTAAGTTTAGAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSSPSV*VSLEGK
Trigger: CTTTCCCTCTAAACTTACTCAAACACTTGGTGAACT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTGTGGAACCAAACCTaGAATATATCCAAGGTATGT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVWNQT*NISKVC
Trigger: ACATACCTTGGATATATTGCAGGTTTGGTTCCACAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTTGTCTTAAGAAATTaGCATAGCCACCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVVLRN*HSHPNF
Trigger: AAAGTTGGGGTGGCTATGGCAATTTCTTAAGACAAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGATATCTGTTCAGAGTaGCCAAAGTATGTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFDICSE*PKYVVV
Trigger: GACAACAACATACTTTGGCCACTCTGAACAGATATC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCTATTGAAGAAAAGTTaGAAGCTACCAAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLLKKS*KLPRGW
Trigger: CCAACCTCTTGGTAGCTTCCAACTTTTCTTCAATAG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGCCTTATTGCCGATATaGGAATGTTTTAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFALLPI*ECFSGF
Trigger: GAAACCACTAAAACATTCCCATATCGGCAATAAGGC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGCTTTTACACACTGTTaGTGGGAGTGTAAATTGCAA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFAFTHC*WECKLQ
Trigger: TTGCAATTTACACTCCCACCAACAGTGTGTAAAAGC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTCATGTTTTCAGATGTaGCTCCATCATAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSCFQM*LHHKHL
Trigger: AAGATGCTTATGATGGAGTCACATCTGAAAACATGA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR TCA 90 bp CAGAACTTACTACATATAACTCATTTCCTCTGCTATAACGGTAGGTACTGTGTATCATGTTTTCAGATGTaGCTCCATCATAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: QNLLHITHFLCYNGRYCVSCFQM*LHHKHL
Trigger: AAGATGCTTATGATGGAGTCACATCTGAAAACATGA...TACACAGTACCTACCGTTATAGCAGAGGAAATGAGTTATATGTAGTAAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR TCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCATCTGAACATCATAACTaGCATAGGCTGATTTTACAC +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPSEHHN*HRLILH
Trigger: GTGTAAAATCAGCCTATGTCAGTTATGATGTTCAGA...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR TCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCAAAGCAGTTTTGTTaGATCACACTCAGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPKQFC*ITLSKL
Trigger: TAACTTACTGAGTGTGATTCAACAAAACTGCTTTGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCACTATATGGAATCAATaGCACCAGTTGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFTIWNQ*HQLVFL
Trigger: CAAGAAAACCAACTGGTGGCATTGATTCCATATAGT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp CAGAACTTACTACATATAACTCATTTCCTCTGCTATAACGGTAGGTACTGTGTAACTATATGGAATCAATaGCACCAGTTGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QNLLHITHFLCYNGRYCVTIWNQ*HQLVFL
Trigger: CAAGAAAACCAACTGGTGGCATTGATTCCATATAGT...TACACAGTACCTACCGTTATAGCAGAGGAAATGAGTTATATGTAGTAAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCATGTAAATTCCACATATaGAAACTGAGAGACATCTCC +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPCKFHI*KLRDIS
Trigger: GGAGATGTCTCTCAGTTTCCATATGTGGAATTTACA...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATCATTAACACAGAGTaGAGAGTTACAAGAACTGCA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFIINTE*RVTRTA
Trigger: TGCAGTTCTTGTAACTCTCCACTCTGTGTTAATGAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGATAGAACACAGATATaGGAGACAGAGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFDRTQI*ETEILD
Trigger: ATCAAGTATCTCTGTCTCCCATATCTGTGTTCTATC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGTATATATTTTATATaGGGTCTCGCCATGTTGACC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFCIYFI*GLAMLT
Trigger: GGTCAACATGGCGAGACCCCATATAAAATATATACA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTTTTTGTAAGTATTTaGAGGCAGCATGAACCATAC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVFVSI*RQHEPY
Trigger: GTATGGTTCATGCTGCCTCCAAATACTTACAAAAAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTAATGTTGTTTTCATaGCTCTTAACACAACGTGCA +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLMLFS*LLTQRA
Trigger: TGCACGTTGTGTTAAGAGGCATGAAAACAACATTAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCACCTTATTGCGTTTTaGAGATATTGTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFHLIAF*RYCGFD
Trigger: ATCAAAACCACAATATCTGCAAAACGCAATAAGGTG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR GCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCACACATATGTTTATTaGAGCACTGTTCACAATAGT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFHTYVY*STVHNS
Trigger: ACTATTGTGAACAGTGCTGCAATAAACATATGTGTG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCACTTCCATCTTCATTATaGACTTCACTATTAACCAGT +
Preference number: 4 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPLPSSL*TSLLTS
Trigger: ACTGGTTAATAGTGAAGTCCATAATGAAGATGGAAG...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCCTATTCCCAGTCTATaGGTTTCTGAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFPIPSL*VSEFHF
Trigger: AAAATGAAATTCAGAAACCCATAGACTGGGAATAGG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CCA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTTTCTAGATGTTTTATaGCTATACTTCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFFLDVL*LYFCFT
Trigger: GGTGAAGCAGAAGTATAGCCATAAAACATCTAGAAA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CAA 72 bp CTTATTGCGTTTTGCAGATATTGTGGTTTTGATGAATaGGTTTCTTTCAATCCTGTGTCCAACAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: LIAFCRYCGFDE*VSFNPVSNKSM
Trigger: CATAGACTTGTTGGACACAGGATTGAAAGAAACCAATTCATCAAAACCACAATATCTGCAAAACGCAATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
3UTR CAA 72 bp AAAAGAGAGAATAAAACTAATTACTCTTATATGTACTaGAGCCAAGTAGTTGCTGCTTCCAGATGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: KRENKTNYSYMY*SQVVAASRCEL
Trigger: TAGCTCACATCTGGAAGCAGCAACTACTTGGCTCAAGTACATATAAGAGTAATTAGTTTTATTCTCTCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS GCA 90 bp TCCGGGGTCGCTCACCGGCACGCGGGGCGCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCCGAGGACAGGGTCGTGGAGTCCACA +
Preference number: 5 (lower is better)
Translates to: SGVAHRHAGRCAVPG*FGADRAEDRVVEST
Trigger: TGTGGACTCCACGACCCTGTCCTCGGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGGTGAGCGACCCCGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442107.1
ENST00000444443.5
ENST00000453686.1
CDS GCA 90 bp GAGACTTTCCCATGTCGGCACGCGGGGCGCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCCGAGGACAGGGTCGTGGAGTCCACA +
Preference number: 5 (lower is better)
Translates to: ETFPCRHAGRCAVPG*FGADRAEDRVVEST
Trigger: TGTGGACTCCACGACCCTGTCCTCGGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGACATGGGAAAGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396668.8
ENST00000420833.5
CDS GCA 90 bp GAATTAGGAAAAGATCGGCACGCGGGGCGCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCCGAGGACAGGGTCGTGGAGTCCACA +
Preference number: 5 (lower is better)
Translates to: ELGKDRHAGRCAVPG*FGADRAEDRVVEST
Trigger: TGTGGACTCCACGACCCTGTCCTCGGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGATCTTTTCCTAATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396667.7
CDS TCA 90 bp GCCACCAGTTGGTTTTCTTGCCCCCTAGGAATTCTTCCTGTTCCCTaGCAAGTAGGGCAGGTGACACTATCTCTTCCTGTAAATTCCACA +
Preference number: 5 (lower is better)
Translates to: ATSWFSCPLGILPVP*QVGQVTLSLPVNST
Trigger: TGTGGAATTTACAGGAAGAGATAGTGTCACCTGCCCTACTTGTCAGGGAACAGGAAGAATTCCTAGGGGGCAAGAAAACCAACTGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396667.7
ENST00000396668.8
ENST00000444443.5
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACACCAGTTGGTTTTCTaGCCCCCTAGGAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGHQLVF*PPRNSS
Trigger: GGAAGAATTCCTAGGGGGCAAGAAAACCAACTGGTG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGAAAGTAGAGAGGGGTaGGACACGAAGTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVESREG*DTKWAL
Trigger: CAATGCCCACTTCGTGTCCAACCCCTCTCTACTTTC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACCAAACAGCACATGTaGCCACTCATAAGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGTKQHM*PLISGS
Trigger: ACTCCCACTTATGAGTGGCAACATGTGCTGTTTGGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAATCAATGCCACCAGTaGGTTTTCTTGCCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVNQCHQ*VFLPPR
Trigger: CCTAGGGGGCAAGAAAACCAACTGGTGGCATTGATT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAAATGGCCTCCTCTTCTaGAATCATGTGACAATGCCA +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGNGLLF*NHVTMP
Trigger: TGGCATTGTCACATGATTCAAGAAGAGGAGGCCATT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACCATCACATACAGCTTaGTTCTTCTTGGCCTTAATC +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGPSHTA*FFLALI
Trigger: GATTAAGGCCAAGAAGAACAAAGCTGTATGTGATGG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGCCCCAACTGATAAGTaGTGTTTCTTCCACAGTCGA +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVAPTDK*CFFHSR
Trigger: TCGACTGTGGAAGAAACACAACTTATCAGTTGGGGC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACTCATAAGTGGGAGTaGAACAATGAGAACAGATGG +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGTHKWE*NNENRW
Trigger: CCATCTGTTCTCATTGTTCAACTCCCACTTATGAGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACCAATAATGGTTATGTaGTTTAAGCGTGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGPIMVM*FKRAFP
Trigger: TGGAAAGGCACGCTTAAACAACATAACCATTATTGG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGACAGAGATACTTGATCTaGCTCCAGTTGTACTACTTA +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGQRYLI*LQLYYL
Trigger: TAAGTAGTACAACTGGAGCAAGATCAAGTATCTCTG...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAAGCAGAGGCAGGGTTaGAGAGGACTGGCTCCAATT +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFKQRQG*RGLAPI
Trigger: AATTGGAGCCAGTCCTCTCAAACCCTGCCTCTGCTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTCACCAAGGACAATCTaGGAAAGTCAAGATAGGCTG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVSPRTI*ESQDRL
Trigger: CAGCCTATCTTGACTTTCCAAGATTGTCCTTGGTGA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGACACGAAGTGGGCATaGAAAAAGATAGAATTGGGG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVDTKWA*KKIELG
Trigger: CCCCAATTCTATCTTTTTCAATGCCCACTTCGTGTC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGAATGATTCTTCTCCCTaGAGAAACTGGCTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVNDSSP*RNWLGG
Trigger: TCCTCCTAGCCAGTTTCTCAAGGGAGAAGAATCATT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTGACAATGCCACTATaGAAATCACTAGTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGVTMPL*KSLVVK
Trigger: CTTTACCACTAGTGATTTCAATAGTGGCATTGTCAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCACCAGTTGGTTTTCTaGCCCCCTAGGAATTCTTCC +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFHQLVF*PPRNSS
Trigger: GGAAGAATTCCTAGGGGGCAAGAAAACCAACTGGTG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAATCAATGCCACCAGTaGGTTTTCTTGCCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFNQCHQ*VFLPPR
Trigger: CCTAGGGGGCAAGAAAACCAACTGGTGGCATTGATT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAACTATGTTATGCACTTaGATGGATATCAGAGTACAG +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGTMLCT*MDIRVQ
Trigger: CTGTACTCTGATATCCATCAAAGTGCATAACATAGT...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGTTGTCACAGTAACTaGCATCATGAGTACTATGTT +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGCCHSN*HHEYYV
Trigger: AACATAGTACTCATGATGCAAGTTACTGTGACAACA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGAGTGAAGTGGGACAATTaGAACTATAACAGTCTACAT +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGVKWDN*NYNSLH
Trigger: ATGTAGACTGTTATAGTTCAAATTGTCCCACTTCAC...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp CATGTTGCCACTCATAAGTGGGAGTTGAACAATGAGAACAGATGGACACAGGGATGTGGTTTTGATGAATaGGTTTCTTTCAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: HVATHKWELNNENRWTQGCGFDE*VSFNPV
Trigger: CACAGGATTGAAAGAAACCAATTCATCAAAACCACA...TCCCTGTGTCCATCTGTTCTCATTGTTCAACTCCCACTTATGAGTGGCAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGAGAAAGAACTCGATTaGGTCAGGACATTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVEKELD*VRTLLK
Trigger: CTTCAACAATGTCCTGACCAAATCGAGTTCTTTCTC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGACTCATAAGTGGGAGTaGAACAATGAGAACAGATGG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVTHKWE*NNENRW
Trigger: CCATCTGTTCTCATTGTTCAACTCCCACTTATGAGT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCACACCAGTTGGTTTTCTaGCCCATCCCTCTTCACAGA +
Preference number: 5 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPHQLVF*PIPLHR
Trigger: TCTGTGAAGAGGGATGGGCAAGAAAACCAACTGGTG...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGCCCCAACTGATAAGTaGTGTTTCTTCCACAGTCGA +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFAPTDK*CFFHSR
Trigger: TCGACTGTGGAAGAAACACAACTTATCAGTTGGGGC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGCACATCCCTCTCTCCTaGAGACAAAATAACATTGAA +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVHIPLS*RQNNIE
Trigger: TTCAATGTTATTTTGTCTCAAGGAGAGAGGGATGTG...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGGATTTGGTCAGGACATaGTTGAAGGGCAATAAGAAA +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVDLVRT*LKGNKK
Trigger: TTTCTTATTGCCCTTCAACAATGTCCTGACCAAATC...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGGGGGCATTTCTATTaGTTTGCTATTATAAGCATG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVWGHFY*FAIISM
Trigger: CATGCTTATAATAGCAAACAAATAGAAATGCCCCCA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGTGTGGTTTTGATGAATaGGTTTCTTTCAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVCGFDE*VSFNPV
Trigger: CACAGGATTGAAAGAAACCAATTCATCAAAACCACA...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAATGATTCTTCTCCCTaGAGAAACTGGCTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFNDSSP*RNWLGG
Trigger: TCCTCCTAGCCAGTTTCTCAAGGGAGAAGAATCATT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp ACAATCTTGGAAAGTCAAGATAGGCTGAAAGCTAGGTCTCTTGCACAAGTTGTGATCAAAGCATCTGTTTaGTCACATATCAAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: TILESQDRLKARSLAQVVIKASV*SHIKVP
Trigger: AGGAACCTTGATATGTGACAAAACAGATGCTTTGAT...CACAACTTGTGCAAGAGACCTAGCTTTCAGCCTATCTTGACTTTCCAAGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGGTGGGAGTGTAAATaGCAACCATTGTGGAAGACA +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFWWECK*QPLWKT
Trigger: TGTCTTCCACAATGGTTGCAATTTACACTCCCACCA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGCTATTGAAGAAAAGTaGGAAGCTACCAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFAIEEK*EATKRL
Trigger: CAACCTCTTGGTAGCTTCCAACTTTTCTTCAATAGC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp TGTTTCATATCAAGTGGACCAATAATGGTTATGTTGTTTAAGCGTGCCTTTCCACCAATAATGGTTATGTaGTTTAAGCGTGCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: CFISSGPIMVMLFKRAFPPIMVM*FKRAFP
Trigger: TGGAAAGGCACGCTTAAACAACATAACCATTATTGG...TGGAAAGGCACGCTTAAACAACATAACCATTATTGGTCCACTTGATATGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420833.5
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCCTGAATTGCTACAACTaGATGCCAAAACTTGAACAG +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFLNCYN*MPKLEQ
Trigger: CTGTTCAAGTTTTGGCATCAAGTTGTAGCAATTCAG...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTCTGGGCAAAGTAAATaGAAACCTTCCAGAAAGGAT +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFSGQSK*KPSRKD
Trigger: ATCCTTTCTGGAAGGTTTCAATTTACTTTGCCCAGA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCGTGACAATGCCACTATaGAAATCACTAGTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFVTMPL*KSLVVK
Trigger: CTTTACCACTAGTGATTTCAATAGTGGCATTGTCAC...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCAAATATTCCAGGCTCTaGGTTAAATCGCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFKYSRL*VKSLLN
Trigger: ATTCAGCAGCGATTTAACCAAGAGCCTGGAATATTT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396667.7
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCACTATGTTATGCACTTaGATGGATATCAGAGTACAG +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFTMLCT*MDIRVQ
Trigger: CTGTACTCTGATATCCATCAAAGTGCATAACATAGT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCTGTTGTCACAGTAACTaGCATCATGAGTACTATGTT +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFCCHSN*HHEYYV
Trigger: AACATAGTACTCATGATGCAAGTTACTGTGACAACA...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS-3UTR CAA 90 bp AGTTGGAAGCTACCAAGAGGTTGGTTAATGATGTTTAAGGAGATAAGTTGTTTCATGGTAAGCAACCTTTaGCTTATAACCCTAGTAACT +
Preference number: 5 (lower is better)
Translates to: SWKLPRGWLMMFKEISCFMVSNL*LITLVT
Trigger: AGTTACTAGGGTTATAAGCAAAAGGTTGCTTACCAT...GAAACAACTTATCTCCTTAAACATCATTAACCAACCTCTTGGTAGCTTCCAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396667.7
ENST00000396668.8
CDS GCA 72 bp GCTCACCGGCACGCGGGGCGCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCCGAGGACAGGGTCGTG +
Preference number: 6 (lower is better)
Translates to: AHRHAGRCAVPG*FGADRAEDRVV
Trigger: CACGACCCTGTCCTCGGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGGTGAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442107.1
ENST00000444443.5
ENST00000453686.1
CDS GCA 72 bp CCATGTCGGCACGCGGGGCGCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCCGAGGACAGGGTCGTG +
Preference number: 6 (lower is better)
Translates to: PCRHAGRCAVPG*FGADRAEDRVV
Trigger: CACGACCCTGTCCTCGGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGACATGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396668.8
ENST00000420833.5
CDS CCA 72 bp CGGCGCAGCCGCTCAGCCTCGCTCCGGAAGGGGACCTaGGGACTGCACGTCCGGGGTCGCTCACCGGCACGC +
Preference number: 6 (lower is better)
Translates to: RRSRSASLRKGT*GLHVRGRSPAR
Trigger: GCGTGCCGGTGAGCGACCCCGGACGTGCAGTCCCCAGGTCCCCTTCCGGAGCGAGGCTGAGCGGCTGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442107.1
ENST00000444443.5
ENST00000453686.1
CDS GCA 72 bp AAAGATCGGCACGCGGGGCGCTGCGCAGTCCCGGGCTaGTTCGGCGCGGACAGGGCCGAGGACAGGGTCGTG +
Preference number: 6 (lower is better)
Translates to: KDRHAGRCAVPG*FGADRAEDRVV
Trigger: CACGACCCTGTCCTCGGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGATCTTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396667.7
CDS GCA 72 bp GAGAAAGAGACTTTCCCATGTCGGCACGCGGGGCGCTaGGCAGTCCCGGGCTGCTTCGGCGCGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: EKETFPCRHAGR*AVPGCFGADRA
Trigger: GGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGACATGGGAAAGTCTCTTTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396668.8
ENST00000420833.5
CDS GCA 72 bp GCTGCTGAATTAGGAAAAGATCGGCACGCGGGGCGCTaGGCAGTCCCGGGCTGCTTCGGCGCGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: AAELGKDRHAGR*AVPGCFGADRA
Trigger: GGCCCTGTCCGCGCCGAAGCAGCCCGGGACTGCGCAGCGCCCCGCGTGCCGATCTTTTCCTAATTCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396667.7
CDS TCA 72 bp TGGTTTTCTTGCCCCCTAGGAATTCTTCCTGTTCCCTaGCAAGTAGGGCAGGTGACACTATCTCTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: WFSCPLGILPVP*QVGQVTLSLPV
Trigger: TACAGGAAGAGATAGTGTCACCTGCCCTACTTGTCAGGGAACAGGAAGAATTCCTAGGGGGCAAGAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396667.7
ENST00000396668.8
ENST00000444443.5
CDS TCA 72 bp AGTTCCCTGTATCCTTTCCATTTTCCTGAACTCTTGTaGCATCCAGATTCACTACTTAGCAGTCACGTAGTC +
Preference number: 6 (lower is better)
Translates to: SSLYPFHFPELL*HPDSLLSSHVV
Trigger: GACTACGTGACTGCTAAGTAGTGAATCTGGATGTCACAAGAGTTCAGGAAAATGGAAAGGATACAGGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492762.1
CDS CAA 90 bp GTGGCTGAAGTACATTTAAATATTCAGACTGCCCCAACTGATAAGTaGTGTTTCTTCCACAGTCGACATACTGATACCTCTCCTGGGATA +
Preference number: 6 (lower is better)
Translates to: VAEVHLNIQTAPTDK*CFFHSRHTDTSPGI
Trigger: TATCCCAGGAGAGGTATCAGTATGTCGACTGTGGAAGAAACACAACTTATCAGTTGGGGCAGTCTGAATATTTAAATGTACTTCAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396667.7
ENST00000396668.8
ENST00000462754.1
CDS CAA 72 bp TTACTGTTAATGACTATTTGTCAAGGGAGTAAGGAATaGGATGTGGGGCTCAGTTCCCTGTATCCTTTCCAT +
Preference number: 6 (lower is better)
Translates to: LLLMTICQGSKE*DVGLSSLYPFH
Trigger: ATGGAAAGGATACAGGGAACTGAGCCCCACATCCAATTCCTTACTCCCTTGACAAATAGTCATTAACAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492762.1
CDS CAA 90 bp ATATTCTTATTACTGTTAATGACTATTTGTCAAGGGAGTAAGGAATaGGATGTGGGGCTCAGTTCCCTGTATCCTTTCCATTTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: IFLLLLMTICQGSKE*DVGLSSLYPFHFPE
Trigger: TTCAGGAAAATGGAAAGGATACAGGGAACTGAGCCCCACATCCAATTCCTTACTCCCTTGACAAATAGTCATTAACAGTAATAAGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492762.1
CDS GCA 72 bp GTTGTCACAGTAACTTGCATCATGAGTACTATGTTATaGACTTTGATGGATATCAGAGTACAGAAATCATAC +
Preference number: 6 (lower is better)
Translates to: VVTVTCIMSTML*TLMDIRVQKSY
Trigger: GTATGATTTCTGTACTCTGATATCCATCAAAGTGCATAACATAGTACTCATGATGCAAGTTACTGTGACAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396667.7
ENST00000396668.8
ENST00000462754.1