RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM104 (Homo sapiens)

Ensembl gene IDs: ENSG00000109066

Ensembl transcript IDs: ENST00000335464.10, ENST00000417024.6, ENST00000578764.5, ENST00000582330.2, ENST00000582773.5, ENST00000584171.1, ENST00000584246.1

Found 718 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCAGGCGGCTGTGTCCCTGTAGAAGGGATGCTCCATCCAGCCTaGTACTCCGGAGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: LAGGCVPVEGMLHPA*YSGARAHSEGPRSS
Trigger: AGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCTCCGGAGTAGCAGGCTGGATGGAGCATCCCTTCTACAGGGACACAGCCGCCTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp GCACTTCTTGTTCTTGTCATGGGGCCAGCCAGGCCCTCTCTGAGGTaGCACCTACCGCCTCCCAGGCCTGGTGGGAGGGTGGGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: ALLVLVMGPARPSLR*HLPPPRPGGRVGPA
Trigger: GGCAGGGCCCACCCTCCCACCAGGCCTGGGAGGCGGTAGGTGCCACCTCAGAGAGGGCCTGGCTGGCCCCATGACAAGAACAAGAAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp CCTGTTGCCGAGGCTGCTCCCTGCCCCGTAGTGAGGACAGCTGTGTaGCTAGGGGCCCGTCATGGTGCCACTGCCCACCTCCACCACCCA +
Preference number: 1 (lower is better)
Translates to: PVAEAAPCPVVRTAV*LGARHGATAHLHHP
Trigger: TGGGTGGTGGAGGTGGGCAGTGGCACCATGACGGGCCCCTAGCCACACAGCTGTCCTCACTACGGGGCAGGGAGCAGCCTCGGCAACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 90 bp ACGGCAGTGGTGAGGGTCCCCACTTGGCATCAGCGATGTGGTCACTaGTGGCCAGTTCCCTCCAGGGCAGGGAACACGGCCACCGACTCC +
Preference number: 1 (lower is better)
Translates to: TAVVRVPTWHQRCGH*WPVPSRAGNTATDS
Trigger: GGAGTCGGTGGCCGTGTTCCCTGCCCTGGAGGGAACTGGCCAGCAGTGACCACATCGCTGATGCCAAGTGGGGACCCTCACCACTGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp GAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCAAGTGCGTGCATaGCTGAGTGGGAGGTGGCTGGGGACCTGGCCTCCTTCCATGGGA +
Preference number: 1 (lower is better)
Translates to: ESPVFPRRPAQQVRA*LSGRWLGTWPPSMG
Trigger: TCCCATGGAAGGAGGCCAGGTCCCCAGCCACCTCCCACTCAGCCATGCACGCACTTGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 90 bp CGTAGTGAGGACAGCTGTGTGGCTAGGGGCCCGTCATGGTGCCACTaGCCACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGC +
Preference number: 1 (lower is better)
Translates to: RSEDSCVARGPSWCH*PPPPPSSASQSITC
Trigger: GCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGTGGGCAGTGGCACCATGACGGGCCCCTAGCCACACAGCTGTCCTCACTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 90 bp ATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCAAGTGCGTaGATGGCTGAGTGGGAGGTGGCTGGGGACCTGGCCTCCTTCCAT +
Preference number: 1 (lower is better)
Translates to: IRVTCVSQEASPASA*MAEWEVAGDLASFH
Trigger: ATGGAAGGAGGCCAGGTCCCCAGCCACCTCCCACTCAGCCATGCACGCACTTGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp TGTGTTTCCCAGGAGGCCAGCCCAGCAAGTGCGTGCATGGCTGAGTaGGAGGTGGCTGGGGACCTGGCCTCCTTCCATGGGAATGGAAGT +
Preference number: 1 (lower is better)
Translates to: CVSQEASPASACMAE*EVAGDLASFHGNGS
Trigger: ACTTCCATTCCCATGGAAGGAGGCCAGGTCCCCAGCCACCTCCCACTCAGCCATGCACGCACTTGCTGGGCTGGCCTCCTGGGAAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR TCA 90 bp CCTAAGGGAGCCGCTTTTAGTGTTGGAGTGGGAGCACGGGCAGCCTaGCCATTGTCAGGGTGGGAACCTCAGAGCCCTCCCACTGCCATG +
Preference number: 1 (lower is better)
Translates to: PKGAAFSVGVGARAA*PLSGWEPQSPPTAM
Trigger: CATGGCAGTGGGAGGGCTCTGAGGTTCCCACCCTGACAATGGTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp AGCACCCACGCTCAGCCCCTAAGGGAGCCGCTTTTAGTGTTGGAGTaGGAGCACGGGCAGCCTGACCATTGTCAGGGTGGGAACCTCAGA +
Preference number: 1 (lower is better)
Translates to: STHAQPLREPLLVLE*EHGQPDHCQGGNLR
Trigger: TCTGAGGTTCCCACCCTGACAATGGTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGGGGCTGAGCGTGGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR TCA 90 bp CCTTGCTCTTGGCCTGACCACTGCAGGCCCCTGCTCTACCCAACCTaGGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGG +
Preference number: 1 (lower is better)
Translates to: PCSWPDHCRPLLYPT*EASWEEVAMIDGEG
Trigger: CCCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAGAGCAGGGGCCTGCAGTGGTCAGGCCAAGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR TCA 90 bp AGCAGGAGGACACTGAGGAGCAAAGCAGCTAGACAACGGCAGTGGTaGGGGTCCCCACTTGGCATCAGCGATGTGGTCACTGCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: SRRTLRSKAARQRQW*GSPLGISDVVTAGQ
Trigger: CTGGCCAGCAGTGACCACATCGCTGATGCCAAGTGGGGACCCTCACCACTGCCGTTGTCTAGCTGCTTTGCTCCTCAGTGTCCTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 90 bp GCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCATaGCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCT +
Preference number: 1 (lower is better)
Translates to: AGPAAWSQCRKYPMP*LAHNDPQRRLPLQS
Trigger: AGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 90 bp TGGGCCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTaGGATTCGCCTCTGAAGAGGCAGCAGCTGCTAGTGGAGGTTTCT +
Preference number: 1 (lower is better)
Translates to: WALPSQADLARILPA*DSPLKRQQLLVEVS
Trigger: AGAAACCTCCACTAGCAGCTGCTGCCTCTTCAGAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp GCTGGCCAGTTCCCTCCAGGGCAGGGAACACGGCCACCGACTCCATaGCTGGGCGGTTCCAGACTGTCACATAAATCAACCTGGGCTTTA +
Preference number: 1 (lower is better)
Translates to: AGQFPPGQGTRPPTP*LGGSRLSHKSTWAL
Trigger: TAAAGCCCAGGTTGATTTATGTGACAGTCTGGAACCGCCCAGCCATGGAGTCGGTGGCCGTGTTCCCTGCCCTGGAGGGAACTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp TTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTaGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAG +
Preference number: 1 (lower is better)
Translates to: LAPGGRDPKLSPAFQ*PLTMGHPCLGICPQ
Trigger: CTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 90 bp AAGCTCTCTCCAGCTTTCCAGTGGCCCTTAACCATGGGTCACCCTTaGTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAG +
Preference number: 1 (lower is better)
Translates to: KLSPAFQWPLTMGHP*LGICPQTGRFHFPQ
Trigger: CTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGAGAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTTAAGCTTTCCTCCACAACGACACCT +
Preference number: 1 (lower is better)
Translates to: LACTGGIWGHAGGRC*VEAVEFKLSSTTTP
Trigger: AGGTGTCGTTGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 90 bp GCCTACTTTGCCAAGTTGATGATGGCTGCAGTGAAACGTGCCGGATaGACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGG +
Preference number: 1 (lower is better)
Translates to: AYFAKLMMAAVKRAG*TWRASITWGSLAVG
Trigger: CCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCCATCATCAACTTGGCAAAGTAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 90 bp TTACCCCACTTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTaGCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGT +
Preference number: 1 (lower is better)
Translates to: LPHFTNEGGQVTEAR*LKWQARLPGPNAES
Trigger: ACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAAGTGGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 90 bp CGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTaGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTGGCCCTTAAC +
Preference number: 1 (lower is better)
Translates to: RRLPLQSAINTIGPR*KGSQALSSFPVALN
Trigger: GTTAAGGGCCACTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATaGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGC +
Preference number: 1 (lower is better)
Translates to: FTNEGGQVTEARCLK*QARLPGPNAESTQC
Trigger: GCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR TCA 90 bp CATTGGCCGTCAGCGGCAGAAGCCTGGCATCGATGGAGAGGAAGGTaGCCTCATCTGACTTACAGCAGGAGGACACTGAGGAGCAAAGCA +
Preference number: 1 (lower is better)
Translates to: HWPSAAEAWHRWRGR*PHLTYSRRTLRSKA
Trigger: TGCTTTGCTCCTCAGTGTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCTTCTGCCGCTGACGGCCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp TTTGCCAAGTTGATGATGGCTGCAGTGAAACGTGCCGGATGCACGTaGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTC +
Preference number: 1 (lower is better)
Translates to: FAKLMMAAVKRAGCT*RASITWGSLAVGVL
Trigger: GAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCCATCATCAACTTGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTaGGGCCATGCAGGTGGCAGATGTTGGGTAGAGGCTGTTGAGTTT +
Preference number: 1 (lower is better)
Translates to: KKVYSHLDLACTGGI*GHAGGRCWVEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp GGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTaGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGA +
Preference number: 1 (lower is better)
Translates to: GRCGRGVIPVMSLRT*EQPRVTQAEGPGGR
Trigger: TCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATaGAGAAGGGGCATTTGTTTTTCCCGTGGATGGAAAGTGACACGT +
Preference number: 1 (lower is better)
Translates to: LPNLRGLLGGSRNDR*RRGICFSRGWKVTR
Trigger: ACGTGTCACTTTCCATCCACGGGAAAAACAAATGCCCCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 90 bp ATGGAGAAGGGGCATTTGTTTTTCCCGTGGATGGAAAGTGACACGTaGGGACAAGCTATGAGAAACACTGAGGTGCGACGGCACAGAGAA +
Preference number: 1 (lower is better)
Translates to: MEKGHLFFPWMESDT*GQAMRNTEVRRHRE
Trigger: TTCTCTGTGCCGTCGCACCTCAGTGTTTCTCATAGCTTGTCCCCACGTGTCACTTTCCATCCACGGGAAAAACAAATGCCCCTTCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAGCTGCCCGGGGGAGTaGGGACAGGTGCAGACTGGG +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSSCPGE*GQVQTG
Trigger: CCCAGTCTGCACCTGTCCTCACTCCCCCGGGCAGCT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGCCAGGCAGAAGGACCTaGTGGGAGAGCTGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: PEFPANPTPDPETTLGPGPGRRT*WESCPG
Trigger: CCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGG...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCACAGCCAGGCCCTCTCTaGGGTGGCACCTACCGCCTC +
Preference number: 2 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPQPGPL*GGTYRL
Trigger: GAGGCGGTAGGTGCCACCTCAGAGAGGGCCTGGCTG...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAGGGGCCCGTCATGGTaGCACTGCCCACCTCCACCA +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSRGPSW*HCPPPP
Trigger: TGGTGGAGGTGGGCAGTGGCACCATGACGGGCCCCT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR CCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGAGGCCCTCTCTGAGGTaGCACCTACCGCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PEFPANPTPDPETTLGPGRPSLR*HLPPPR
Trigger: CCTGGGAGGCGGTAGGTGCCACCTCAGAGAGGGCCT...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGGCACTGCCAGCCACTaGCCCTCTGCAGTGGCTTTC +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSGTASH*PSAVAF
Trigger: GAAAGCCACTGCAGAGGGGCAGTGGCTGGCAGTGCC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR TCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGGGACCCCCAGGTCCTaGAGCAGTAGAAGGCACGTT +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSGTPRS*SSRRHV
Trigger: AACGTGCCTTCTACTGCTTCAGGACCTGGGGGTCCC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAGGGCTGGGGCCCCTATaGCTCCTGTCACTAGACCTG +
Preference number: 2 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPGLGPL*LLSLDL
Trigger: CAGGTCTAGTGACAGGAGGCATAGGGGCCCCAGCCC...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCACCACTGCAGGCCCCTaGTCTACCCAACCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSTTAGP*STQPER
Trigger: CCTCTCAGGTTGGGTAGAGCAGGGGCCTGCAGTGGT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATTCGCCTCGGCAGAAGGACCTGGTaGGAGAGCTGCCCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: PCRHRQTWLGYFQPGIRLGRRTW*ESCPGE
Trigger: CTCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCC...GAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATACCGCCTCCCAGGCCTaGTGGGAGGGTGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHTASQA*WEGGPC
Trigger: GCAGGGCCCACCCTCCCACCAGGCCTGGGAGGCGGT...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCGATGTGGTCACTGCTaGCCAGTTCCCTCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSRCGHC*PVPSRA
Trigger: TGCCCTGGAGGGAACTGGCCAGCAGTGACCACATCG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGAGACAACGGCAGTGGTaGGGGTCCCCACTTGGCATC +
Preference number: 2 (lower is better)
Translates to: LACTGGIWGHAGGRCWVERQRQW*GSPLGI
Trigger: GATGCCAAGTGGGGACCCTCACCACTGCCGTTGTCT...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCTCCTTGCTCTTGGCCTaGCCACTGCAGGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: TWRASITWGSLAVGVLCPSLLLA*PLQAPA
Trigger: AGCAGGGGCCTGCAGTGGTCAGGCCAAGAGCAAGGA...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGTGGCAGTGCCAGCACTaGATCTCCCATTGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEWQCQH*ISHCAG
Trigger: CCCTGCACAATGGGAGATGCAGTGCTGGCACTGCCA...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGCAGCGATGTGGTCACTaGTGGCCAGTTCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVQRCGH*WPVPSR
Trigger: CCTGGAGGGAACTGGCCAGCAGTGACCACATCGCTG...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCCAGCGATGTGGTCACTaGTGGCCAGTTCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: TWRASITWGSLAVGVLCPQRCGH*WPVPSR
Trigger: CCTGGAGGGAACTGGCCAGCAGTGACCACATCGCTG...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CAA 90 bp ACACTGAGCACCCACGCTCAGCCCCTAAGGGAGCCGCTTTTAGTGTaGGAGTGGGAGCACGGGCAGCCTGACCATTGTCAGGGTGGGAAC +
Preference number: 2 (lower is better)
Translates to: TLSTHAQPLREPLLV*EWEHGQPDHCQGGN
Trigger: GTTCCCACCCTGACAATGGTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGGGGCTGAGCGTGGGTGCTCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGGGTGGAAGGTGGGTaGGGAGAACAACCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: RCLKWQARLPGPNAESTQWVEGG*GEQPQL
Trigger: CAGCTGGGGTTGTTCTCCCCACCCACCTTCCACCCA...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp TTAGAACTTGGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGTGGGTGGAAGGTGGGTaGGGAGAACAACCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: LELGSSHASPRQKDLVGEWVEGG*GEQPQL
Trigger: CAGCTGGGGTTGTTCTCCCCACCCACCTTCCACCCA...CTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGCGTGTTGGAAGATGTaGGAGAGGTGTGATTCCAGT +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSACWKM*ERCDSS
Trigger: ACTGGAATCACACCTCTCCCACATCTTCCAACACGC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSAGGRC*VEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACAAGCTGCCCGGGGGAGTaGGGACAGGTGCAGACTGGG +
Preference number: 2 (lower is better)
Translates to: MRNTEVRRHRESGLRPITSCPGE*GQVQTG
Trigger: CCCAGTCTGCACCTGTCCTCACTCCCCCGGGCAGCT...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATAGCCACAGTCCCACCTaGCCCATGAAGACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHSHSPT*PMKTWE
Trigger: CTCCCAGGTCTTCATGGGGCAGGTGGGACTGTGGCT...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGGCTGCAGTGAAACGTaGCGGATGCACGTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHGCSET*RMHVES
Trigger: GCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCC...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGTGCCCCATGAAGACCTaGGAGCAACTAAATCTGGGC +
Preference number: 2 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWCPMKT*EQLNLG
Trigger: GCCCAGATTTAGTTGCTCCCAGGTCTTCATGGGGCA...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CAA 90 bp CAAGCTCTCTCCAGCTTTCCAGTGGCCCTTAACCATGGGTCACCCTaGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: QALSSFPVALNHGSP*LGNLPPDRTLPLPP
Trigger: TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGAGAGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR TCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTGCTCTAGCCTCAGGTaGGGAACAGCCAGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQCSSLR*GTARSC
Trigger: GCAGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCA...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR GCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACATGCTCCATCCAGCCTaGTACTCCGGAGCTCGCGCC +
Preference number: 2 (lower is better)
Translates to: SLASMERKVTSSDLQQEDMLHPA*YSGARA
Trigger: GGCGCGAGCTCCGGAGTAGCAGGCTGGATGGAGCAT...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACATGAGTCTTAGAACTTaGGAGCAGCCACGCGTCACC +
Preference number: 2 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYMSLRT*EQPRVT
Trigger: GGTGACGCGTGGCTGCTCCCAAGTTCTAAGACTCAT...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCAGGATACTTCCAGCCTaGGATTCGCCTCTGAAGAGG +
Preference number: 2 (lower is better)
Translates to: TWRASITWGSLAVGVLCPRILPA*DSPLKR
Trigger: CCTCTTCAGAGGCGAATCCCAGGCTGGAAGTATCCT...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCAGGTGCCAGGTGGGGATaGCTTCCCTCTAGTAGGACC +
Preference number: 2 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPGARWG*LPSSRT
Trigger: GGTCCTACTAGAGGGAAGCCATCCCCACCTGGCACC...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGACCCTGAGACCACCTTaGGCCCCGGGAGACCCTACA +
Preference number: 2 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRTLRPP*APGDPT
Trigger: TGTAGGGTCTCCCGGGGCCCAAGGTGGTCTCAGGGT...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGGGCTCAGGTGGGTCTaGTGCTTCTGTGGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: IYKLAAAALASGEEQPGAGLRWV*CFCGEG
Trigger: TCCCTCCCCACAGAAGCACCAGACCCACCTGAGCCC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CAA 90 bp ATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATaGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: MTLSGGYPSSLQSTP*APGGRDPKLSPAFQ
Trigger: CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR GCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCTGGCAGTGCCAGCACTaGATCTCCCATTGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAWQCQH*ISHCAG
Trigger: CCCTGCACAATGGGAGATGCAGTGCTGGCACTGCCA...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCGCGTGTTGGAAGATGTaGGAGAGGTGTGATTCCAGT +
Preference number: 2 (lower is better)
Translates to: TWRASITWGSLAVGVLCPACWKM*ERCDSS
Trigger: ACTGGAATCACACCTCTCCCACATCTTCCAACACGC...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGGGGTGAAGCGTGTTaGAAGATGTGGGAGAGGTGT +
Preference number: 2 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKGGEAC*KMWERC
Trigger: ACACCTCTCCCACATCTTCCAACACGCTTCACCCCC...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CAGCAGACGGTCCCTTTCAGAGACAAGCTCCAGACTTTAGGCCCAGCTGGCAGGGGGGGTGAAGCGTGTTaGAAGATGTGGGAGAGGTGT +
Preference number: 2 (lower is better)
Translates to: QQTVPFRDKLQTLGPAGRGGEAC*KMWERC
Trigger: ACACCTCTCCCACATCTTCCAACACGCTTCACCCCC...CCTGCCAGCTGGGCCTAAAGTCTGGAGCTTGTCTCTGAAAGGGACCGTCTGCTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGCCCGTGGATGGAAAGTaGCACGTGGGGACAAGCTAT +
Preference number: 2 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQPVDGK*HVGTSY
Trigger: ATAGCTTGTCCCCACGTGTCACTTTCCATCCACGGG...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTCCACCACCCAGCAGTaGTTCCCAGTCTATCACCTG +
Preference number: 2 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQSTTQQ*FPVYHL
Trigger: CAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGA...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR CCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCACGTCACAGGCAGACCTaGCTAGGATACTTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPRHRQT*LGYFQP
Trigger: AGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACG...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp GAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCAAGGTGGCTGGGGACCTaGCCTCCTTCCATGGGAATG +
Preference number: 2 (lower is better)
Translates to: ENAEFIRVTCVSQEASPARWLGT*PPSMGM
Trigger: CATTCCCATGGAAGGAGGCCAGGTCCCCAGCCACCT...TGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACCCAAGGGATATAGCGTaGACACTGAGCACCCACGCT +
Preference number: 2 (lower is better)
Translates to: SLASMERKVTSSDLQQEDPRDIA*TLSTHA
Trigger: AGCGTGGGTGCTCAGTGTTCACGCTATATCCCTTGG...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCTGCCCCATGAAGACCTaGGAGCAACTAAATCTGGGC +
Preference number: 2 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCCPMKT*EQLNLG
Trigger: GCCCAGATTTAGTTGCTCCCAGGTCTTCATGGGGCA...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGAAGGTGACCTCATCTaGCTTACAGCAGGAGGACAC +
Preference number: 2 (lower is better)
Translates to: IYKLAAAALASGEEQPGAEGDLI*LTAGGH
Trigger: GTGTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACATTCTTGTTCTTGTCATaGGGCCAGCCAGGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: MRNTEVRRHRESGLRPITFLFLS*GQPGPL
Trigger: GAGAGGGCCTGGCTGGCCCCATGACAAGAACAAGAA...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR GCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGGGCTGGGGCCCCTATaGCTCCTGTCACTAGACCTG +
Preference number: 2 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEGLGPL*LLSLDL
Trigger: CAGGTCTAGTGACAGGAGGCATAGGGGCCCCAGCCC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCTTCTTGTTCTTGTCATaGGGCCAGCCAGGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: HVENAEFIRVTCVSQEASFLFLS*GQPGPL
Trigger: GAGAGGGCCTGGCTGGCCCCATGACAAGAACAAGAA...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: IYKLAAAALASGEEQPGAAGGRC*VEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CAA 90 bp TCTGCAAAATGGAAACCACAAGCTGAGCTTGCCTACTTTGCCAAGTaGATGATGGCTGCAGTGAAACGTGCCGGATGCACGTGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: SAKWKPQAELAYFAK*MMAAVKRAGCTWRA
Trigger: GGCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCCATCATCAACTTGGCAAAGTAGGCAAGCTCAGCTTGTGGTTTCCATTTTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCAGGATACTTCCAGCCTaGGATTCGCCTCTGAAGAGG +
Preference number: 2 (lower is better)
Translates to: HVENAEFIRVTCVSQEASRILPA*DSPLKR
Trigger: CCTCTTCAGAGGCGAATCCCAGGCTGGAAGTATCCT...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGAGTCGCAATGATAGATaGAGAAGGGGCATTTGTTTT +
Preference number: 2 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQSRNDR*RRGICF
Trigger: AAAACAAATGCCCCTTCTCCATCTATCATTGCGACT...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACAAGAGGGAACGTAATTaGAGAAGGGTAGTTCCAGAT +
Preference number: 2 (lower is better)
Translates to: SLASMERKVTSSDLQQEDKRERN*RRVVPD
Trigger: ATCTGGAACTACCCTTCTCCAATTACGTTCCCTCTT...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR TCA 90 bp GGCAGATGTTGGGTAGAGGCTGTTGAGTTTAAGCTTTCCTCCACAACGACACCTATGGAAACCACAAGCTaGGCTTGCCTACTTTGCCAA +
Preference number: 2 (lower is better)
Translates to: GRCWVEAVEFKLSSTTTPMETTS*ACLLCQ
Trigger: TTGGCAAAGTAGGCAAGCTCAGCTTGTGGTTTCCAT...AGGTGTCGTTGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCAACATCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp CAGGAGGCCAGCCCAGCAAGTGCGTGCATGGCTGAGTaGGAGGTGGCTGGGGACCTGGCCTCCTTCCATGGG +
Preference number: 3 (lower is better)
Translates to: QEASPASACMAE*EVAGDLASFHG
Trigger: CCCATGGAAGGAGGCCAGGTCCCCAGCCACCTCCCACTCAGCCATGCACGCACTTGCTGGGCTGGCCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp GGCTGTGTCCCTGTAGAAGGGATGCTCCATCCAGCCTaGTACTCCGGAGCTCGCGCCCACAGCGAGGGCCCT +
Preference number: 3 (lower is better)
Translates to: GCVPVEGMLHPA*YSGARAHSEGP
Trigger: AGGGCCCTCGCTGTGGGCGCGAGCTCCGGAGTAGCAGGCTGGATGGAGCATCCCTTCTACAGGGACACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp ACCTGTGTTTCCCAGGAGGCCAGCCCAGCAAGTGCGTaGATGGCTGAGTGGGAGGTGGCTGGGGACCTGGCC +
Preference number: 3 (lower is better)
Translates to: TCVSQEASPASA*MAEWEVAGDLA
Trigger: GGCCAGGTCCCCAGCCACCTCCCACTCAGCCATGCACGCACTTGCTGGGCTGGCCTCCTGGGAAACACAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GTGTTTCCCAGGAGGCCAGCCCAGCAAGTGCGTGCATaGCTGAGTGGGAGGTGGCTGGGGACCTGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: VFPRRPAQQVRA*LSGRWLGTWPP
Trigger: AGGAGGCCAGGTCCCCAGCCACCTCCCACTCAGCCATGCACGCACTTGCTGGGCTGGCCTCCTGGGAAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp TACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTaGGGCCATGCAGGTGGCAGATGTTGGGTAGAGGCT +
Preference number: 3 (lower is better)
Translates to: YSHLDLACTGGI*GHAGGRCWVEA
Trigger: AGCCTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATaGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGT +
Preference number: 3 (lower is better)
Translates to: EGGQVTEARCLK*QARLPGPNAES
Trigger: ACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 72 bp GTCTTCCTTGCTCTTGGCCTGACCACTGCAGGCCCCTaGTCTACCCAACCTGAGAGGCCTCCTGGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: VFLALGLTTAGP*STQPERPPGRK
Trigger: CTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAGAGCAGGGGCCTGCAGTGGTCAGGCCAAGAGCAAGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp TGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTaGCCCCAGACAGGACGCTTCCACTTCCCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: WPLTMGHPCLGI*PQTGRFHFPQA
Trigger: GGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 72 bp GCTCAGCCCCTAAGGGAGCCGCTTTTAGTGTTGGAGTaGGAGCACGGGCAGCCTGACCATTGTCAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: AQPLREPLLVLE*EHGQPDHCQGG
Trigger: CCCACCCTGACAATGGTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGGGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp AAACGTGCCGGATGCACGTGGAGAGCCAGCATCACCTaGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: KRAGCTWRASIT*GSLAVGVLCPW
Trigger: CCAGGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTaGTCCCAATGCAGAAAGTACCCAATGCCATGCCTG +
Preference number: 3 (lower is better)
Translates to: GGSLPQMAGPAA*SQCRKYPMPCL
Trigger: CAGGCATGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR-3UTR CAA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGCCATCCAACCCCACATaGCCCAAGGGATATAGCGTG +
Preference number: 3 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVPSNPT*PKGYSV
Trigger: CACGCTATATCCCTTGGGCAATGTGGGGTTGGATGG...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp GAGGCAAAGAAAGTTTACTCCCACCTTGACCTGGCCTaGACCGGGGGCATCTGGGGCCATGCAGGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: EAKKVYSHLDLA*TGGIWGHAGGR
Trigger: TCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTTTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp TCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTaGCTGGTCCCAATGCAGAAAGTACCCAATGCCATG +
Preference number: 3 (lower is better)
Translates to: SRRLAASNGRPG*LVPMQKVPNAM
Trigger: CATGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 72 bp CCAGCTTTCCAGTGGCCCTTAACCATGGGTCACCCTTaGTTGGGAATCTGCCCCCAGACAGGACGCTTCCAC +
Preference number: 3 (lower is better)
Translates to: PAFQWPLTMGHP*LGICPQTGRFH
Trigger: GTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAAAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 72 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTaGCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAAT +
Preference number: 3 (lower is better)
Translates to: FTNEGGQVTEAR*LKWQARLPGPN
Trigger: ATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 72 bp CCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTaGGATTCGCCTCTGAAGAGGCAGCAGCTGCTAGTG +
Preference number: 3 (lower is better)
Translates to: PSQADLARILPA*DSPLKRQQLLV
Trigger: CACTAGCAGCTGCTGCCTCTTCAGAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTaGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: AEVTPPVCNQHH*PQVEGIPSSLQ
Trigger: CTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR GCA 72 bp GCCAAGTTGATGATGGCTGCAGTGAAACGTGCCGGATaGACGTGGAGAGCCAGCATCACCTGGGGCTCTCTT +
Preference number: 3 (lower is better)
Translates to: AKLMMAAVKRAG*TWRASITWGSL
Trigger: AAGAGAGCCCCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCCATCATCAACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTaGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTG +
Preference number: 3 (lower is better)
Translates to: PLQSAINTIGPR*KGSQALSSFPV
Trigger: CACTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR TCA 72 bp ACACTGAGGAGCAAAGCAGCTAGACAACGGCAGTGGTaGGGGTCCCCACTTGGCATCAGCGATGTGGTCACT +
Preference number: 3 (lower is better)
Translates to: TLRSKAARQRQW*GSPLGISDVVT
Trigger: AGTGACCACATCGCTGATGCCAAGTGGGGACCCTCACCACTGCCGTTGTCTAGCTGCTTTGCTCCTCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp CTACTTTGCCAAGTTGATGATGGCTGCAGTGAAACGTaGCGGATGCACGTGGAGAGCCAGCATCACCTGGGG +
Preference number: 3 (lower is better)
Translates to: LLCQVDDGCSET*RMHVESQHHLG
Trigger: CCCCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCCATCATCAACTTGGCAAAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR GCA 72 bp GCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCATaGCTGGCACATAATGACCCTCAGCGGAGGTTACCC +
Preference number: 3 (lower is better)
Translates to: AAWSQCRKYPMP*LAHNDPQRRLP
Trigger: GGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CCA 72 bp TTGATGATGGCTGCAGTGAAACGTGCCGGATGCACGTaGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: LMMAAVKRAGCT*RASITWGSLAV
Trigger: AACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCCATCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp ACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTTAAGCTTTCCTCCACA +
Preference number: 3 (lower is better)
Translates to: TGGIWGHAGGRC*VEAVEFKLSST
Trigger: TGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTaGCCCTTAACCATGGGTCACCCTTGCTTGGGAATC +
Preference number: 3 (lower is better)
Translates to: GGRDPKLSPAFQ*PLTMGHPCLGI
Trigger: GATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR TCA 72 bp TCCCGTGGATGGAAAGTGACACGTGGGGACAAGCTATaGGAAACACTGAGGTGCGACGGCACAGAGAAAGCG +
Preference number: 3 (lower is better)
Translates to: SRGWKVTRGDKL*ETLRCDGTEKA
Trigger: CGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCATAGCTTGTCCCCACGTGTCACTTTCCATCCACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTaGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCT +
Preference number: 3 (lower is better)
Translates to: GRGVIPVMSLRT*EQPRVTQAEGP
Trigger: AGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp GGGCATTTGTTTTTCCCGTGGATGGAAAGTGACACGTaGGGACAAGCTATGAGAAACACTGAGGTGCGACGG +
Preference number: 3 (lower is better)
Translates to: GHLFFPWMESDT*GQAMRNTEVRR
Trigger: CCGTCGCACCTCAGTGTTTCTCATAGCTTGTCCCCACGTGTCACTTTCCATCCACGGGAAAAACAAATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CCA 72 bp CTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATaGAGAAGGGGCATTTGTTTTTCCCGTGGATGGAAA +
Preference number: 3 (lower is better)
Translates to: LRGLLGGSRNDR*RRGICFSRGWK
Trigger: TTTCCATCCACGGGAAAAACAAATGCCCCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR-3UTR CAA 90 bp GGCAGATGTTGGGTAGAGGCTGTTGAGTTTAAGCTTTCCTCCACAACGACACCTGCAGTAGAAGGCACGTaGAAAATGCAGAGTTCATTC +
Preference number: 3 (lower is better)
Translates to: GRCWVEAVEFKLSSTTTPAVEGT*KMQSSF
Trigger: GAATGAACTCTGCATTTTCAACGTGCCTTCTACTGC...AGGTGTCGTTGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCAACATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR TCA 72 bp ACTAAGCTCAGCACTTTAATCCCCACAACTGGCCAGTaGCATAGCTGTTACCCCACTTTACAAATGAGGGAG +
Preference number: 3 (lower is better)
Translates to: TKLSTLIPTTGQ*HSCYPTLQMRE
Trigger: CTCCCTCATTTGTAAAGTGGGGTAACAGCTATGTCACTGGCCAGTTGTGGGGATTAAAGTGCTGAGCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGCTGCCCGGGGGAGGCAGAAGGACCTGGTaGGAGAGCTGCCCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSHASPRQKDLVGELPGGGRRTW*ESCPGE
Trigger: CTCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCC...TCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTGGCAGAAGGACCTGGTaGGAGAGCTGCCCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPGRRTW*ESCPGE
Trigger: CTCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCC...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCCAGCAGGACGAGGCTaGCAAGCCACCCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSPAGRG*QATRQW
Trigger: CCACTGCCGGGTGGCTTGTCAGCCTCGTCCTGCTGG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGCCCTCCCCTTGTCCGTaGCCGATGCGGATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PEFPANPTPDPETTLGPGPSPCP*PMRIRA
Trigger: GGCCCTGATCCGCATCGGGCACGGACAAGGGGAGGG...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGCACCTTGACCTGGCCTaGACCGGGGGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PEFPANPTPDPETTLGPGHLDLA*TGGIWG
Trigger: GCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTG...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGACCGCCTCCCAGGCCTaGTGGGAGGGTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVTASQA*WEGGPC
Trigger: GCAGGGCCCACCCTCCCACCAGGCCTGGGAGGCGGT...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGCTGCCAGGGCAGAGGTaGCGCAGCCCGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWLPGQR*RSPWAP
Trigger: GGGAGCCCACGGGCTGCGCCACCTCTGCCCTGGCAG...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGCCAGCAGGACGAGGCTaGCAAGCCACCCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEPAGRG*QATRQW
Trigger: CCACTGCCGGGTGGCTTGTCAGCCTCGTCCTGCTGG...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCCAGGAAGGCGGGGATaGCGTACTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSPGRRG*RTGCRC
Trigger: GCACCGGCATCCAGTACGTCATCCCCGCCTTCCTGG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCACCCTCCCCTTGTCCGTaGCCGATGCGGATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPPSPCP*PMRIRA
Trigger: GGCCCTGATCCGCATCGGGCACGGACAAGGGGAGGG...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGTCAGCCAGGGGCGGGTaGCCCTCCCCTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLSARGG*PSPCPC
Trigger: GCACGGACAAGGGGAGGGGCACCCGCCCCTGGCTGA...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTCTCAGGTGGGTCTGGTaGTTCTGTGGGGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPLRWVW*FCGEGG
Trigger: GCCTCCCTCCCCACAGAAGCACCAGACCCACCTGAG...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCGTCATGGTGCCACTaGCCACCTCCACCACCCAGC +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVPSWCH*PPPPPS
Trigger: GCTGGGTGGTGGAGGTGGGCAGTGGCACCATGACGG...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCTGGCCTTTGCCTGTTaGCGAGGCTGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVLAFAC*RGCSLP
Trigger: GGGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAG...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTGTCACGGAGGCTCGCTaGCTCAAATGGCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGVTEAR*LKWQAR
Trigger: CCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGAC...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGCTGCCCGGGGGAAGGGACTCCAGGTCGTaGGTGCAGAAGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SSHASPRQKDLVGELPGGRDSRS*VQKATS
Trigger: GCTGGTGGCCTTCTGCACCCACGACCTGGAGTCCCT...TCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGTGTCCCTGCGGCAGTaGTACACCAGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSVSLRQ*YTRKAG
Trigger: CCCCGCCTTCCTGGTGTACCACTGCCGCAGGGACAC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACACCGCCTCCCAGGCCTaGTGGGAGGGTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYTASQA*WEGGPC
Trigger: GCAGGGCCCACCCTCCCACCAGGCCTGGGAGGCGGT...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCTGCACCGGGGGCATCTaGGGCCATGCAGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVCTGGI*GHAGGR
Trigger: TCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCA...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGCAGCCAGGCCCTCTCTaGGGTGGCACCTACCGCCTC +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVQPGPL*GGTYRL
Trigger: GAGGCGGTAGGTGCCACCTCAGAGAGGGCCTGGCTG...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCGGAGCACGGGCAGCCTaGCCATTGTCAGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVGARAA*PLSGWE
Trigger: TTCCCACCCTGACAATGGTCAGGCTGCCCGTGCTCC...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGTCCTTGCTCTTGGCCTaGCCACTGCAGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PEFPANPTPDPETTLGPGSLLLA*PLQAPA
Trigger: AGCAGGGGCCTGCAGTGGTCAGGCCAAGAGCAAGGA...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCAGAGGTTCCTTAGGTaGAAGGACGGCGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCQRFLR*KDGGCR
Trigger: GCGGCAGCCGCCGTCCTTGCACCTAAGGAACCTCTG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCTTGGGCATGGTGAGTaGGCCCGTGCCCACGATGAG +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCLGHGE*ARAHDE
Trigger: CTCATCGTGGGCACGGGCGCACTCACCATGCCCAAG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGCTGCCCGGGGGACTCTTCCAGTGGAGCTaGGCGTTGGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SSHASPRQKDLVGELPGGLFQWS*ALAAAM
Trigger: CATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAG...TCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGCGCTGCAGGTCACCTaGATGAGGGAGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSALQVT*MREKGT
Trigger: CGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCATGCTCCATCCAGCCTaGTACTCCGGAGCTCGCGCC +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVMLHPA*YSGARA
Trigger: GGCGCGAGCTCCGGAGTAGCAGGCTGGATGGAGCAT...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAGCCACTGCCCCTCTaGAGTGGCTTTCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVQPLPL*SGFPGA
Trigger: CGCTCCTGGAAAGCCACTGCAGAGGGGCAGTGGCTG...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTTCTGCACAGACAGGATaGGCCGCTTCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPSAQTG*AASLPA
Trigger: AGCGGGCAGAGAAGCGGCCCATCCTGTCTGTGCAGA...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTGTGCCGCCCTCGCGGTaGAAGAGTGTCTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPVPPSR*KSVFQL
Trigger: CAACTGGAAGACACTCTTCCACCGCGAGGGCGGCAC...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTAGGGACTCCAGGTCGTaGGTGCAGAAGGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGRDSRS*VQKATS
Trigger: GCTGGTGGCCTTCTGCACCCACGACCTGGAGTCCCT...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCAACGACACCTGCTCCTaGGCCAGGCTGGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVNDTCS*ARLGWH
Trigger: ATGCCAGCCCAGCCTGGCCCAGGAGCAGGTGTCGTT...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAACGACACCTGCTCCTaGGCCAGGCTGGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSNDTCS*ARLGWH
Trigger: ATGCCAGCCCAGCCTGGCCCAGGAGCAGGTGTCGTT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTACTCCCACCTTGACCTaGCCTGCACCGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGTPTLT*PAPGAS
Trigger: AGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGT...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGGCTCTGGGGCTCAGGTaGGTCTGGTGCTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PEFPANPTPDPETTLGPGALGLR*VWCFCG
Trigger: CCCACAGAAGCACCAGACCCACCTGAGCCCCAGAGC...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTACAGCCAGGAGCTGCTaGCATGAGGCTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGTARSC*HEALGL
Trigger: GAGCCCCAGAGCCTCATGCCAGCAGCTCCTGGCTGT...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCACAGCCAGGAGCTGCTaGCATGAGGCTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSTARSC*HEALGL
Trigger: GAGCCCCAGAGCCTCATGCCAGCAGCTCCTGGCTGT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCACTGCCCCTCTGCAGTaGCTTTCCAGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSTAPLQ*LSRSGA
Trigger: TGCCCCGCTCCTGGAAAGCCACTGCAGAGGGGCAGT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTTGCTCTAGCCTCAGGTaGGGAACAGCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGCSSLR*GTARSC
Trigger: GCAGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCA...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCTCTTCCAGTGGAGCTaGGCGTTGGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSLFQWS*ALAAAM
Trigger: CATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTAGATCGCCAAGTAGATaGGGTAGGCGTCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPRSPSR*GRRPLG
Trigger: GCCGAGTGGACGCCTACCGCATCTACTTGGCGATCT...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTATCAGCCAGGGGCGGGTaGCCCTCCCCTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVSARGG*PSPCPC
Trigger: GCACGGACAAGGGGAGGGGCACCCGCCCCTGGCTGA...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCACTCCAGGTCGTGGGTaGAGAAGGCCACCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCTPGRG*RRPPAQ
Trigger: CTGTGCTGGTGGCCTTCTGCACCCACGACCTGGAGT...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGGGGCTGGGGCCCCTATaGCTCCTGTCACTAGACCTG +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEGLGPL*LLSLDL
Trigger: CAGGTCTAGTGACAGGAGGCATAGGGGCCCCAGCCC...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCCACTGCCATGTCACTaGCAAGCCGCTGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSPLPCH*QAAEVP
Trigger: TGGCACCTCAGCGGCTTGGCAGTGACATGGCAGTGG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCCACTGCCATGTCACTaGCAAGCCGCTGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCPLPCH*QAAEVP
Trigger: TGGCACCTCAGCGGCTTGGCAGTGACATGGCAGTGG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCACCACTGCAGGCCCCTaGTCTACCCAACCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVTTAGP*STQPER
Trigger: CCTCTCAGGTTGGGTAGAGCAGGGGCCTGCAGTGGT...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCAGCGATGTGGTCACTaGTGGCCAGTTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCQRCGH*WPVPSR
Trigger: CCTGGAGGGAACTGGCCAGCAGTGACCACATCGCTG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTGGCTGCAGTGAAACGTaGCGGATGCACGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGGCSET*RMHVES
Trigger: GCTCTCCACGTGCATCCGGCACGTTTCACTGCAGCC...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGGTGGGCCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATCTCCACAACGACACCTaGTCCTGGGCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWALPSQADLARILPAWDLHNDT*SWARLG
Trigger: GCCCAGCCTGGCCCAGGAGCAGGTGTCGTTGTGGAG...ATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGGCCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGCTGGCCTTTGCCTGTTaGCGAGGCTGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWLAFAC*RGCSLP
Trigger: GGGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAG...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGTCACGGAGGCTCGCTaGCTCAAATGGCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVVTEAR*LKWQAR
Trigger: CCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGAC...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAGTGGAGCTGCGCGTTaGCTGCAGCCATGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSSGAAR*LQPWPL
Trigger: TAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTAGTGGAGCTGCGCGTTaGCTGCAGCCATGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGSGAAR*LQPWPL
Trigger: TAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACT...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTTGGGTGGAAGGTGGGTaGGGAGAACAACCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGWVEGG*GEQPQL
Trigger: CAGCTGGGGTTGTTCTCCCCACCCACCTTCCACCCA...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAGGCAGAAGGACCTaGTGGGAGAGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYPGRRT*WESCPG
Trigger: CCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGG...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAGCAAGTGCGTGCATaGCTGAGTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVQQVRA*LSGRWL
Trigger: CAGCCACCTCCCACTCAGCCATGCACGCACTTGCTG...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGGGGCTCTCTTGCTGTTaGGGTTCTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEGLSCC*GSLPLA
Trigger: GGCCAGGGGCAGAGAACCCCAACAGCAAGAGAGCCC...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGTGAGGACAGCTGTGTaGCTAGGGGCCCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSVRTAV*LGARHG
Trigger: ACCATGACGGGCCCCTAGCCACACAGCTGTCCTCAC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTACCATTGGCCCCAGGTaGAAGGGATCCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPTIGPR*KGSQAL
Trigger: GAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGT...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGGCTCGCTGCCTCAAATaGCAGGCCCGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWARCLK*QARLPG
Trigger: ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGCAGCCAGGCCCTCTCTaGGGTGGCACCTACCGCCTC +
Preference number: 4 (lower is better)
Translates to: AEVTPPVCNQHHWPQVEGQPGPL*GGTYRL
Trigger: GAGGCGGTAGGTGCCACCTCAGAGAGGGCCTGGCTG...CCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGGGAGCACGGGCAGCCTaGCCATTGTCAGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWGARAA*PLSGWE
Trigger: TTCCCACCCTGACAATGGTCAGGCTGCCCGTGCTCC...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGCTGCCCGGGGGACGTGGGGACAAGCTATaGGAAACACTGAGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SSHASPRQKDLVGELPGGRGDKL*ETLRCD
Trigger: GTCGCACCTCAGTGTTTCTCATAGCTTGTCCCCACG...TCCCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGTCCTTGCTCTTGGCCTaGCCACTGCAGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWSLLLA*PLQAPA
Trigger: AGCAGGGGCCTGCAGTGGTCAGGCCAAGAGCAAGGA...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCTGCCGCAGCTCCTaGAGCACAGCCAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPGCRSS*STASSQ
Trigger: TTGGGAGCTGGCTGTGCTGCAGGAGCTGCGGCAGCC...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582773.5
CDS-3UTR GCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEELRVG*SHGLYH
Trigger: GTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTC...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGGATGGGCCGCTTCTCTaGCCGCTCGTAGTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWDGPLL*PLVVVP
Trigger: CGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATC...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCACACCGCAGGAGTCATTaGCAGTGGCGCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPHRRSH*QWRCRS
Trigger: TGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTG...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGGGCTGGGGCCCCTATaGCTCCTGTCACTAGACCTG +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVGLGPL*LLSLDL
Trigger: CAGGTCTAGTGACAGGAGGCATAGGGGCCCCAGCCC...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGGTGAAACGTGCCGGATaGACGTGGAGAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PEFPANPTPDPETTLGPGVKRAG*TWRASI
Trigger: GATGCTGGCTCTCCACGTGCATCCGGCACGTTTCAC...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTCACCTTGACCTGGCCTaGACCGGGGGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSHLDLA*TGGIWG
Trigger: GCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTG...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCCGTCATGGTGCCACTaGCCACCTCCACCACCCAGC +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTPSWCH*PPPPPS
Trigger: GCTGGGTGGTGGAGGTGGGCAGTGGCACCATGACGG...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATTCGCCTCGCCGAGGCTGCTCCCTaGCCCGTAGTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: PCRHRQTWLGYFQPGIRLAEAAP*PVVRTA
Trigger: AGCTGTCCTCACTACGGGGCAGGGAGCAGCCTCGGC...GAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGGCACTGCCAGCCACTaGCCCTCTGCAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVGTASH*PSAVAF
Trigger: GAAAGCCACTGCAGAGGGGCAGTGGCTGGCAGTGCC...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACGTCACGGAGGCTCGCTaGCTCAAATGGCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYVTEAR*LKWQAR
Trigger: CCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGAC...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGACCAGCCTTGTGAGGTaGCGCTTGGAGGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWTSLVR*RLEETG
Trigger: CCCCGTCTCCTCCAAGCGCCACCTCACAAGGCTGGT...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCCACCCAGAAGGTGTaGCGGAAAGGGGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLPTQKV*RKGDLC
Trigger: GCACAGGTCCCCTTTCCGCCACACCTTCTGGGTGGG...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGTGGGTGGAAGGTGGGTaGGGAGAACAACCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEWVEGG*GEQPQL
Trigger: CAGCTGGGGTTGTTCTCCCCACCCACCTTCCACCCA...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGCCAGGCAGAAGGACCTaGTGGGAGAGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AEVTPPVCNQHHWPQVEGPGRRT*WESCPG
Trigger: CCCCGGGCAGCTCTCCCACCAGGTCCTTCTGCCTGG...CCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGCCTCCCAGGCCTGGTaGGAGGGTGGGCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWASQAW*EGGPCR
Trigger: ACGGCAGGGCCCACCCTCCCACCAGGCCTGGGAGGC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACAGGCCCTCTCTGAGGTaGCACCTACCGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYRPSLR*HLPPPR
Trigger: CCTGGGAGGCGGTAGGTGCCACCTCAGAGAGGGCCT...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAAGGTGGCTGGGGACCTaGCCTCCTTCCATGGGAATG +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPRWLGT*PPSMGM
Trigger: CATTCCCATGGAAGGAGGCCAGGTCCCCAGCCACCT...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGACCCTGAGACCACCTTaGGCCCCGGGAGACCCTACA +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLTLRPP*APGDPT
Trigger: TGTAGGGTCTCCCGGGGCCCAAGGTGGTCTCAGGGT...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATAGGTGGCGCAGCCCGTaGGCTCCCCGAGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHRWRSP*APRVPC
Trigger: GCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCT...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCACTGCCAGGGCAGAGGTaGCGCAGCCCGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSALPGQR*RSPWAP
Trigger: GGGAGCCCACGGGCTGCGCCACCTCTGCCCTGGCAG...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGCACCGACTCCATGGCTaGGCGGTTCCAGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEHRLHG*AVPDCH
Trigger: GTGACAGTCTGGAACCGCCCAGCCATGGAGTCGGTG...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCGGCCACCGACTCCATaGCTGGGCGGTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYRPPTP*LGGSRL
Trigger: CAGTCTGGAACCGCCCAGCCATGGAGTCGGTGGCCG...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGCGTGCCGGATGCACGTaGAGAGCCAGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVRAGCT*RASITW
Trigger: CCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACG...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGCGTGCCGGATGCACGTaGAGAGCCAGCATCACCTGG +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWRAGCT*RASITW
Trigger: CCAGGTGATGCTGGCTCTCCACGTGCATCCGGCACG...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGAACGACACCTGCTCCTaGGCCAGGCTGGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVNDTCS*ARLGWH
Trigger: ATGCCAGCCCAGCCTGGCCCAGGAGCAGGTGTCGTT...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACTGCACCGGGGGCATCTaGGGCCATGCAGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYCTGGI*GHAGGR
Trigger: TCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCA...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCATGCACCGGGGGCATCTaGGGCCATGCAGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPCTGGI*GHAGGR
Trigger: TCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCA...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGACTCCCACCTTGACCTaGCCTGCACCGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLTPTLT*PAPGAS
Trigger: AGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGT...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGGCTCTGGGGCTCAGGTaGGTCTGGTGCTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLALGLR*VWCFCG
Trigger: CCCACAGAAGCACCAGACCCACCTGAGCCCCAGAGC...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGACAGCCAGGAGCTGCTaGCATGAGGCTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWTARSC*HEALGL
Trigger: GAGCCCCAGAGCCTCATGCCAGCAGCTCCTGGCTGT...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGGTGGGCCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATACTGCCCCTCTGCAGTaGCTTTCCAGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GWALPSQADLARILPAWDTAPLQ*LSRSGA
Trigger: TGCCCCGCTCCTGGAAAGCCACTGCAGAGGGGCAGT...ATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGGCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCACCATTGGCCCCAGGTaGAAGGGATCCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSTIGPR*KGSQAL
Trigger: GAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGCTCGCTGCCTCAAATaGCAGGCCCGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPARCLK*QARLPG
Trigger: ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGTAGTTGTCCCGGATaGGAACATCGCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVRSCPG*EHRCLR
Trigger: CCTCAGACAGCGATGTTCTCATCCGGGACAACTACG...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCCCGTGGATGGAAAGTaGCACGTGGGGACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCPVDGK*HVGTSY
Trigger: ATAGCTTGTCCCCACGTGTCACTTTCCATCCACGGG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGAGACAACGGCAGTGGTaGGGGTCCCCACTTGGCATC +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVRQRQW*GSPLGI
Trigger: GATGCCAAGTGGGGACCCTCACCACTGCCGTTGTCT...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACAGTTTACTCCCACCTTaGCCTGGCCTGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYSLLPP*PGLHRG
Trigger: CCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACT...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCCAGAGGTTCCTTAGGTaGAAGGACGGCGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPQRFLR*KDGGCR
Trigger: GCGGCAGCCGCCGTCCTTGCACCTAAGGAACCTCTG...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCCTTGGGCATGGTGAGTaGGCCCGTGCCCACGATGAG +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPLGHGE*ARAHDE
Trigger: CTCATCGTGGGCACGGGCGCACTCACCATGCCCAAG...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACGCGCTGCAGGTCACCTaGATGAGGGAGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYALQVT*MREKGT
Trigger: CGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGC...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCGCGCTGCAGGTCACCTaGATGAGGGAGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPALQVT*MREKGT
Trigger: CGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGC...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGCACCGCAGGAGTCATTaGCAGTGGCGCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWHRRSH*QWRCRS
Trigger: TGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTG...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCATGCTCCATCCAGCCTaGTACTCCGGAGCTCGCGCC +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPMLHPA*YSGARA
Trigger: GGCGCGAGCTCCGGAGTAGCAGGCTGGATGGAGCAT...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGCACCTTGACCTGGCCTaGACCGGGGGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKHLDLA*TGGIWG
Trigger: GCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTG...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCCACCTTGACCTGGCCTaGACCGGGGGCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLHLDLA*TGGIWG
Trigger: GCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTG...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCTCCACCACCCAGCAGTaGTTCCCAGTCTATCACCTG +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSSTTQQ*FPVYHL
Trigger: CAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGA...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTAAGGGGCCCGTCATGGTaGCACTGCCCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVRGPSW*HCPPPP
Trigger: TGGTGGAGGTGGGCAGTGGCACCATGACGGGCCCCT...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TTAGAACTTGGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGGCCTGTTGCCGAGGCTaGTCCCTGCCCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LELGSSHASPRQKDLVGEACCRG*SLPRSE
Trigger: CTCACTACGGGGCAGGGAGCAGCCTCGGCAACAGGC...CTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp TTAGAACTTGGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGCTGGCCTTTGCCTGTTaGCGAGGCTGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LELGSSHASPRQKDLVGELAFAC*RGCSLP
Trigger: GGGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAG...CTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTCTGGCCTTTGCCTGTTaGCGAGGCTGCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSLAFAC*RGCSLP
Trigger: GGGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAG...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCACTGCCAGCCACTaGCCCTCTGCAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPGTASH*PSAVAF
Trigger: GAAAGCCACTGCAGAGGGGCAGTGGCTGGCAGTGCC...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAAATGGCAGGCCCGGCTaGCTGGTCCCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPNGRPG*LVPMQK
Trigger: TTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATT...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSRWLQP*PLSQRW
Trigger: CCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGTCCATCCTCTTCCAGTaGAGCTGCGCGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVESILFQ*SCALAA
Trigger: TGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGA...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCGCTGTCTGAGGCTGTaGAGGAGTCGTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCRCLRL*RSRHLP
Trigger: AGGAAGATGACGACTCCTCCACAGCCTCAGACAGCG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAACAGCCAAAGGCCAGCTaGGTGTCCCTGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQQPKAS*VSLRQW
Trigger: CCACTGCCGCAGGGACACCCAGCTGGCCTTTGGCTG...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCACCCACCCAGAAGGTGTaGCGGAAAGGGGACCTGTGC +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPPTQKV*RKGDLC
Trigger: GCACAGGTCCCCTTTCCGCCACACCTTCTGGGTGGG...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCGGGGGTGAAGCGTGTTaGAAGATGTGGGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSGGEAC*KMWERC
Trigger: ACACCTCTCCCACATCTTCCAACACGCTTCACCCCC...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACGCCTCCCAGGCCTGGTaGGAGGGTGGGCCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SLASMERKVTSSDLQQEDASQAW*EGGPCR
Trigger: ACGGCAGGGCCCACCCTCCCACCAGGCCTGGGAGGC...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTTTCTTGTTCTTGTCATaGGGCCAGCCAGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGFLFLS*GQPGPL
Trigger: GAGAGGGCCTGGCTGGCCCCATGACAAGAACAAGAA...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGTGGGCCAGGCTGGGCTaGCATCCTCTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLWARLG*HPLLLF
Trigger: GAAGAGCAGAAGAGGATGCCAGCCCAGCCTGGCCCA...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCTGGGGCCATGCAGGTaGCAGATGTTGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLLGPCR*QMLGRG
Trigger: GCCTCTACCCAACATCTGCCACCTGCATGGCCCCAG...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTGGTCTGGTGCTTCTGTaGGGAGGGAGGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGGLVLL*GGRQRK
Trigger: CTTTCTTTGCCTCCCTCCCCACAGAAGCACCAGACC...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCGGTCTGGTGCTTCTGTaGGGAGGGAGGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCGLVLL*GGRQRK
Trigger: CTTTCTTTGCCTCCCTCCCCACAGAAGCACCAGACC...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCGCTCTGGGGCTCAGGTaGGTCTGGTGCTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTALGLR*VWCFCG
Trigger: CCCACAGAAGCACCAGACCCACCTGAGCCCCAGAGC...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTAGCTAGGGGCCCGTCATaGTGCCACTGCCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVARGPS*CHCPPP
Trigger: TGGAGGTGGGCAGTGGCACCATGACGGGCCCCTAGC...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCATGGGTCACCCTTGCTTaGGAATCTGCCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPWVTLA*ESAPRQ
Trigger: CTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCA...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCCAGCAGGACGAGGCTaGCAAGCCACCCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAPAGRG*QATRQW
Trigger: CCACTGCCGGGTGGCTTGTCAGCCTCGTCCTGCTGG...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGGAGAGTGCTGGCACATaGAGGAGTAGACGCACACCC +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLESAGT*RSRRTP
Trigger: GGGTGTGCGTCTACTCCTTCATGTGCCAGCACTCTC...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGGGGTGTACATGTCCATaGGGCTGTCGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: AEVTPPVCNQHHWPQVEGGCTCP*GCRRGS
Trigger: GCTTCCGCGGCGACAGCCTCATGGACATGTACACCC...CCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGACCTGTGCTTGTTGCTaGCCCCACAGCCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVTCACC*PHSQRP
Trigger: TGGCCTTTGGCTGTGGGGTCAGCAACAAGCACAGGT...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGAGCTGCCCGGGGGAGTaGGGACAGGTGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQSCPGE*GQVQTG
Trigger: CCCAGTCTGCACCTGTCCTCACTCCCCCGGGCAGCT...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGAGCTGCCCGGGGGAGTaGGGACAGGTGCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWSCPGE*GQVQTG
Trigger: CCCAGTCTGCACCTGTCCTCACTCCCCCGGGCAGCT...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp TTAGAACTTGGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGCTTGGGCATGGTGAGTaGGCCCGTGCCCACGATGAG +
Preference number: 4 (lower is better)
Translates to: LELGSSHASPRQKDLVGELGHGE*ARAHDE
Trigger: CTCATCGTGGGCACGGGCGCACTCACCATGCCCAAG...CTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAACCCGGCAGTGGCGAATaGCTTGGGCATGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQPGSGE*LGHGEC
Trigger: GCACTCACCATGCCCAAGGCATTCGCCACTGCCGGG...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCACCGCAGGAGTCATTaGCAGTGGCGCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTHRRSH*QWRCRS
Trigger: TGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTG...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCCCACCCACGGGTACGTaGCGCCCTCGCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCPPTGT*RPRGGR
Trigger: TCTTCCACCGCGAGGGCGGCACGTACCCGTGGGTGG...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAACTCAGGTGGGTCTGGTaGTTCTGTGGGGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQLRWVW*FCGEGG
Trigger: GCCTCCCTCCCCACAGAAGCACCAGACCCACCTGAG...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTAGGGGCCCGTCATGGTaGCACTGCCCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQARGPSW*HCPPPP
Trigger: TGGTGGAGGTGGGCAGTGGCACCATGACGGGCCCCT...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGCCGAGGCTGCTCCCTaGCCCGTAGTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKAEAAP*PVVRTA
Trigger: AGCTGTCCTCACTACGGGGCAGGGAGCAGCCTCGGC...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGCAGCCACTGCCCCTCTaGAGTGGCTTTCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRQPLPL*SGFPGA
Trigger: CGCTCCTGGAAAGCCACTGCAGAGGGGCAGTGGCTG...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGACCATGGGTCACCCTTaGTTGGGAATCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWTMGHP*LGICPQ
Trigger: CTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGT...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGAATGGCAGGCCCGGCTaGCTGGTCCCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLNGRPG*LVPMQK
Trigger: TTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATT...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCAAAGTGAGGAAGGGCTaGCAGCAGAGGTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVKVRKG*QQRFLR
Trigger: CCTAAGGAACCTCTGCTGCCAGCCCTTCCTCACTTT...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCAGTGGAGCTGCGCGTTaGCTGCAGCCATGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTSGAAR*LQPWPL
Trigger: TAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACT...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCAGCCAAAGGCCAGCTaGGTGTCCCTGCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAQPKAS*VSLRQW
Trigger: CCACTGCCGCAGGGACACCCAGCTGGCCTTTGGCTG...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGGTGGGCCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATCTCCTTCCATGGGAATaGAAGTGGGGGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GWALPSQADLARILPAWDLLPWE*KWGPHP
Trigger: TGGATGGGGCCCCCACTTCCATTCCCATGGAAGGAG...ATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGGCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCAGGTGGCTGGGGACCTaGCCTCCTTCCATGGGAATG +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPRWLGT*PPSMGM
Trigger: CATTCCCATGGAAGGAGGCCAGGTCCCCAGCCACCT...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCCAGCAAGTGCGTGCATaGCTGAGTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPQQVRA*LSGRWL
Trigger: CAGCCACCTCCCACTCAGCCATGCACGCACTTGCTG...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACCCTGAGACCACCTTaGGCCCCGGGAGACCCTACA +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRTLRPP*APGDPT
Trigger: TGTAGGGTCTCCCGGGGCCCAAGGTGGTCTCAGGGT...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGAGGTGGCGCAGCCCGTaGGCTCCCCGAGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRRWRSP*APRVPC
Trigger: GCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCT...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCCGATGTGGTCACTGCTaGCCAGTTCCCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPRCGHC*PVPSRA
Trigger: TGCCCTGGAGGGAACTGGCCAGCAGTGACCACATCG...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGTGAGGGTCCCCACTTaGCATCAGCGATGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FTPTLTWPAPGASGAMQVVRVPT*HQRCGH
Trigger: GTGACCACATCGCTGATGCCAAGTGGGGACCCTCAC...CACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGTCAGCGGCAGAAGCCTaGCATCGATGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWSAAEA*HRWRGR
Trigger: CCTTCCTCTCCATCGATGCCAGGCTTCTGCCGCTGA...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTGGGCTCAGGTGGGTCTaGTGCTTCTGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSGLRWV*CFCGEG
Trigger: TCCCTCCCCACAGAAGCACCAGACCCACCTGAGCCC...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAGCAGACGGTCCCTTTCAGAGACAAGCTCCAGACTTTAGGCCCAGCTGGCAGGGCTAGGGGCCCGTCATaGTGCCACTGCCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: QQTVPFRDKLQTLGPAGRARGPS*CHCPPP
Trigger: TGGAGGTGGGCAGTGGCACCATGACGGGCCCCTAGC...CCTGCCAGCTGGGCCTAAAGTCTGGAGCTTGTCTCTGAAAGGGACCGTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTGCTAGGGGCCCGTCATaGTGCCACTGCCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAARGPS*CHCPPP
Trigger: TGGAGGTGGGCAGTGGCACCATGACGGGCCCCTAGC...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTAACTGCCCCTCTGCAGTaGCTTTCCAGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVTAPLQ*LSRSGA
Trigger: TGCCCCGCTCCTGGAAAGCCACTGCAGAGGGGCAGT...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCGCAGGCCCGGCTGCCTaGTCCCAATGCAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTAGPAA*SQCRKY
Trigger: GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGC...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCGCTCGCTGCCTCAAATaGCAGGCCCGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLARCLK*QARLPG
Trigger: ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTAGGAACACCAGCCTTGTaGGGTGGCGCTTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVGTPAL*GGAWRR
Trigger: TCTCCTCCAAGCGCCACCTCACAAGGCTGGTGTTCC...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCCGCGTAGGCCCCTGTaGTGCCCACCAGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFPRRPL*CPPGTP
Trigger: TGGAGTCCCTGGTGGGCATCACAGGGGCCTACGCGG...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGCCGCGTAGGCCCCTGTaGTGCCCACCAGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRPRRPL*CPPGTP
Trigger: TGGAGTCCCTGGTGGGCATCACAGGGGCCTACGCGG...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAACCTGTGCTTGTTGCTaGCCCCACAGCCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPTCACC*PHSQRP
Trigger: TGGCCTTTGGCTGTGGGGTCAGCAACAAGCACAGGT...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATAGTTTACTCCCACCTTaGCCTGGCCTGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHSLLPP*PGLHRG
Trigger: CCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACT...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTTGCTCTAGCCTCAGGTaGGGAACAGCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSCSSLR*GTARSC
Trigger: GCAGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCA...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCCCCGGCAGTGGCGAATaGCTTGGGCATGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLPGSGE*LGHGEC
Trigger: GCACTCACCATGCCCAAGGCATTCGCCACTGCCGGG...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGCCCGGCAGTGGCGAATaGCTTGGGCATGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKPGSGE*LGHGEC
Trigger: GCACTCACCATGCCCAAGGCATTCGCCACTGCCGGG...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRELRVG*SHGLYH
Trigger: GTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTC...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTAGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVELRVG*SHGLYH
Trigger: GTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTC...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCACGGAAAGGGGACCTGTaGTTGTTGCTGACCCCACAG +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPRKGDL*LLLTPQ
Trigger: CTGTGGGGTCAGCAACAAGCACAGGTCCCCTTTCCG...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTAGCCACAGTCCCACCTaGCCCATGAAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSSHSPT*PMKTWE
Trigger: CTCCCAGGTCTTCATGGGGCAGGTGGGACTGTGGCT...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACTGGCAGTGCCAGCACTaGATCTCCCATTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYWQCQH*ISHCAG
Trigger: CCCTGCACAATGGGAGATGCAGTGCTGGCACTGCCA...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGTCTTGGCCTGACCACTaGAGGCCCCTGCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRSWPDH*RPLLYP
Trigger: TGGGTAGAGCAGGGGCCTGCAGTGGTCAGGCCAAGA...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGTCTTGGCCTGACCACTaGAGGCCCCTGCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: AEVTPPVCNQHHWPQVEGSWPDH*RPLLYP
Trigger: TGGGTAGAGCAGGGGCCTGCAGTGGTCAGGCCAAGA...CCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGCTCCACAACGACACCTaGTCCTGGGCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWLHNDT*SWARLG
Trigger: GCCCAGCCTGGCCCAGGAGCAGGTGTCGTTGTGGAG...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCTCCACAACGACACCTaGTCCTGGGCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQALHNDT*SWARLG
Trigger: GCCCAGCCTGGCCCAGGAGCAGGTGTCGTTGTGGAG...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCAGGTGGGTCTGGTaGTTCTGTGGGGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQALRWVW*FCGEGG
Trigger: GCCTCCCTCCCCACAGAAGCACCAGACCCACCTGAG...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATAGGGGCCCGTCATGGTaGCACTGCCCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDRGPSW*HCPPPP
Trigger: TGGTGGAGGTGGGCAGTGGCACCATGACGGGCCCCT...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGCCGAGGCTGCTCCCTaGCCCGTAGTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWAEAAP*PVVRTA
Trigger: AGCTGTCCTCACTACGGGGCAGGGAGCAGCCTCGGC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGCCGAGGCTGCTCCCTaGCCCGTAGTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTAEAAP*PVVRTA
Trigger: AGCTGTCCTCACTACGGGGCAGGGAGCAGCCTCGGC...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATGCCTGTTGCCGAGGCTaGTCCCTGCCCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDACCRG*SLPRSE
Trigger: CTCACTACGGGGCAGGGAGCAGCCTCGGCAACAGGC...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGGCCTGTTGCCGAGGCTaGTCCCTGCCCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQACCRG*SLPRSE
Trigger: CTCACTACGGGGCAGGGAGCAGCCTCGGCAACAGGC...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGCACTGCCAGCCACTaGCCCTCTGCAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKGTASH*PSAVAF
Trigger: GAAAGCCACTGCAGAGGGGCAGTGGCTGGCAGTGCC...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGGTGGCAGATGTTGGGTAGAGGTTACCCCTCCAGTCTaGAATCAACACCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: LACTGGIWGHAGGRCWVEVTPPV*NQHHWP
Trigger: GGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAAC...CTCTACCCAACATCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCAGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGTCACGGAGGCTCGCTaGCTCAAATGGCAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAVTEAR*LKWQAR
Trigger: CCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGAC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCTGCAAGGACGGCGGCTaGCGCAGCTGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFCKDGG*RSCSTA
Trigger: GGCTGTGCTGCAGCTGCGGCAGCCGCCGTCCTTGCA...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582330.2
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCGCTGTCTGAGGCTGTaGAGGAGTCGTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLRCLRL*RSRHLP
Trigger: AGGAAGATGACGACTCCTCCACAGCCTCAGACAGCG...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGTCTGCACAGACAGGATaGGCCGCTTCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRSAQTG*AASLPA
Trigger: AGCGGGCAGAGAAGCGGCCCATCCTGTCTGTGCAGA...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGCGGCAGCAGCATAGATaGCGAGGTCTCCATACAGGT +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWRQQHR*RGLHTG
Trigger: ACCTGTATGGAGACCTCGCCATCTATGCTGCTGCCG...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATGTGTCCCTGCGGCAGTaGTACACCAGGAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDVSLRQ*YTRKAG
Trigger: CCCCGCCTTCCTGGTGTACCACTGCCGCAGGGACAC...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCATGCCCCATGAAGACCTaGGAGCAACTAAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPCPMKT*EQLNLG
Trigger: GCCCAGATTTAGTTGCTCCCAGGTCTTCATGGGGCA...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCGCGTGTTGGAAGATGTaGGAGAGGTGTGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCACWKM*ERCDSS
Trigger: ACTGGAATCACACCTCTCCCACATCTTCCAACACGC...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCAGGCCCTCTCTGAGGTaGCACCTACCGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCRPSLR*HLPPPR
Trigger: CCTGGGAGGCGGTAGGTGCCACCTCAGAGAGGGCCT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAGGTGCCAGGTGGGGATaGCTTCCCTCTAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQGARWG*LPSSRT
Trigger: GGTCCTACTAGAGGGAAGCCATCCCCACCTGGCACC...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCACTCCTTCCATGGGAATaGAAGTGGGGGCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPLLPWE*KWGPHP
Trigger: TGGATGGGGCCCCCACTTCCATTCCCATGGAAGGAG...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCTGTTTTTCCCGTGGATaGAAAGTGACACGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSCFSRG*KVTRGD
Trigger: GTCCCCACGTGTCACTTTCCATCCACGGGAAAAACA...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGGGTCTTCCTTGCTCTTaGCCTGACCACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRGLPCS*PDHCRP
Trigger: GGGCCTGCAGTGGTCAGGCCAAGAGCAAGGAAGACC...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTCACCGACTCCATGGCTaGGCGGTTCCAGACTGTCAC +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSHRLHG*AVPDCH
Trigger: GTGACAGTCTGGAACCGCCCAGCCATGGAGTCGGTG...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGCGGCCACCGACTCCATaGCTGGGCGGTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWRPPTP*LGGSRL
Trigger: CAGTCTGGAACCGCCCAGCCATGGAGTCGGTGGCCG...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGTGAGGGTCCCCACTTaGCATCAGCGATGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPVRVPT*HQRCGH
Trigger: GTGACCACATCGCTGATGCCAAGTGGGGACCCTCAC...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACGGCCCCAAGCCCCATTaGCCGTCAGCGGCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLASMERKVTSSDLQQEDGPKPH*PSAAEA
Trigger: GGCTTCTGCCGCTGACGGCCAATGGGGCTTGGGGCC...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAGGGCTCTCTTGCTGTTaGGGTTCTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPGLSCC*GSLPLA
Trigger: GGCCAGGGGCAGAGAACCCCAACAGCAAGAGAGCCC...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGAGGRC*VEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGC...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACATGCACCGGGGGCATCTaGGGCCATGCAGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTCTGGI*GHAGGR
Trigger: TCTGCCACCTGCATGGCCCCAGATGCCCCCGGTGCA...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGACTCCCACCTTGACCTaGCCTGCACCGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKTPTLT*PAPGAS
Trigger: AGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGT...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAACAGCCAGGAGCTGCTaGCATGAGGCTCTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPTARSC*HEALGL
Trigger: GAGCCCCAGAGCCTCATGCCAGCAGCTCCTGGCTGT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAGTGAGGACAGCTGTGTaGCTAGGGGCCCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQVRTAV*LGARHG
Trigger: ACCATGACGGGCCCCTAGCCACACAGCTGTCCTCAC...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTACTGCCCCTCTGCAGTaGCTTTCCAGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQATAPLQ*LSRSGA
Trigger: TGCCCCGCTCCTGGAAAGCCACTGCAGAGGGGCAGT...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CAA 72 bp ACCCACGCTCAGCCCCTAAGGGAGCCGCTTTTAGTGTaGGAGTGGGAGCACGGGCAGCCTGACCATTGTCAG +
Preference number: 4 (lower is better)
Translates to: THAQPLREPLLV*EWEHGQPDHCQ
Trigger: CTGACAATGGTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGGGGCTGAGCGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSENIAV*GCGGVV
Trigger: GACGACTCCTCCACAGCCTCAGACAGCGATGTTCTC...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCACGTAGTTGTCCCGGATaGGAACATCGCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPRSCPG*EHRCLR
Trigger: CCTCAGACAGCGATGTTCTCATCCGGGACAACTACG...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGTTTCCACCCGGTCTGTaGTTTCAAACGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWFPPGL*FQTGWE
Trigger: CTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAA...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGGGACGTCAAAGAAGGTaGACGGTCCGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRGRQRR*TVRGGE
Trigger: CTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCC...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCAGGGTGTACATGTCCATaGGGCTGTCGCCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPGCTCP*GCRRGS
Trigger: GCTTCCGCGGCGACAGCCTCATGGACATGTACACCC...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGCAGGCGGCACCAGGGTaGTGGTGGGAAACACGACGC +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRQAAPG*WWETRR
Trigger: GCGTCGTGTTTCCCACCATCACCCTGGTGCCGCCTG...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCATGGAAACCACAAGCTaGGCTTGCCTACTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSMETTS*ACLLCQ
Trigger: TTGGCAAAGTAGGCAAGCTCAGCTTGTGGTTTCCAT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCAGTTTACTCCCACCTTaGCCTGGCCTGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCSLLPP*PGLHRG
Trigger: CCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGGCTGCCGCAGCTCCTaGAGCACAGCCAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAGCRSS*STASSQ
Trigger: TTGGGAGCTGGCTGTGCTGCAGGAGCTGCGGCAGCC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582773.5
CDS-3UTR GCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACACAGAGGTTCCTTAGGTaGAAGGACGGCGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTQRFLR*KDGGCR
Trigger: GCGGCAGCCGCCGTCCTTGCACCTAAGGAACCTCTG...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAGCAGACGGTCCCTTTCAGAGACAAGCTCCAGACTTTAGGCCCAGCTGGCAGGCTCTTCCAGTGGAGCTaGGCGTTGGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: QQTVPFRDKLQTLGPAGRLFQWS*ALAAAM
Trigger: CATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAG...CCTGCCAGCTGGGCCTAAAGTCTGGAGCTTGTCTCTGAAAGGGACCGTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGGATGGGCCGCTTCTCTaGCCGCTCGTAGTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQDGPLL*PLVVVP
Trigger: CGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATC...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCAGCCACAGTCCCACCTaGCCCATGAAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLSHSPT*PMKTWE
Trigger: CTCCCAGGTCTTCATGGGGCAGGTGGGACTGTGGCT...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGTGGCAGTGCCAGCACTaGATCTCCCATTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRWQCQH*ISHCAG
Trigger: CCCTGCACAATGGGAGATGCAGTGCTGGCACTGCCA...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCAGCCCAGCAAGTGCGTaGATGGCTGAGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLSPASA*MAEWEV
Trigger: CACCTCCCACTCAGCCATGCACGCACTTGCTGGGCT...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAACCACTGCAGGCCCCTaGTCTACCCAACCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPTTAGP*STQPER
Trigger: CCTCTCAGGTTGGGTAGAGCAGGGGCCTGCAGTGGT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTCTCCACAACGACACCTaGTCCTGGGCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGALHNDT*SWARLG
Trigger: GCCCAGCCTGGCCCAGGAGCAGGTGTCGTTGTGGAG...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCACCGTCATGGTGCCACTaGCCACCTCCACCACCCAGC +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPPSWCH*PPPPPS
Trigger: GCTGGGTGGTGGAGGTGGGCAGTGGCACCATGACGG...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCGCCTGTTGCCGAGGCTaGTCCCTGCCCCGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFACCRG*SLPRSE
Trigger: CTCACTACGGGGCAGGGAGCAGCCTCGGCAACAGGC...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCACAGCCACTGCCCCTCTaGAGTGGCTTTCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAQPLPL*SGFPGA
Trigger: CGCTCCTGGAAAGCCACTGCAGAGGGGCAGTGGCTG...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGGGCACTGCCAGCCACTaGCCCTCTGCAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQGTASH*PSAVAF
Trigger: GAAAGCCACTGCAGAGGGGCAGTGGCTGGCAGTGCC...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTACCATGGGTCACCCTTaGTTGGGAATCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSTMGHP*LGICPQ
Trigger: CTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGT...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGGTTACCCCTCCAGTCTaGAATCAACACCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLVTPPV*NQHHWP
Trigger: GGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAAC...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGAATGGCAGGCCCGGCTaGCTGGTCCCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRNGRPG*LVPMQK
Trigger: TTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATT...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGAAAGTGAGGAAGGGCTaGCAGCAGAGGTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: NEGGQVTEARCLKWQARLKVRKG*QQRFLR
Trigger: CCTAAGGAACCTCTGCTGCCAGCCCTTCCTCACTTT...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCCAAGCCACCCGGCAGTaGCGAATGCCTTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCQATRQ*RMPWAW
Trigger: CCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTG...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTTCCATCCTCTTCCAGTaGAGCTGCGCGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSSILFQ*SCALAA
Trigger: TGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGA...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCATCTGCACAGACAGGATaGGCCGCTTCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPSAQTG*AASLPA
Trigger: AGCGGGCAGAGAAGCGGCCCATCCTGTCTGTGCAGA...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTAGGAGTCATTGCCAGTaGCGCTGCAGGTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSRSHCQ*RCRSPA
Trigger: TGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCT...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTAGGTACTTGGTCTTCTaGACGTCAAAGAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: GRGGAARGLPEFPANPTPRYLVF*TSKKVN
Trigger: GTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCT...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATCGATGTGGTCACTGCTaGCCAGTTCCCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHRCGHC*PVPSRA
Trigger: TGCCCTGGAGGGAACTGGCCAGCAGTGACCACATCG...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTAGAGCCAGCATCACCTaGGGCTCTCTTGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSRASIT*GSLAVG
Trigger: CCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCT...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGTGGGCCAGGCTGGGCTaGCATCCTCTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKWARLG*HPLLLF
Trigger: GAAGAGCAGAAGAGGATGCCAGCCCAGCCTGGCCCA...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCATGGGCCAGGCTGGGCTaGCATCCTCTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPWARLG*HPLLLF
Trigger: GAAGAGCAGAAGAGGATGCCAGCCCAGCCTGGCCCA...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAAACGACACCTGCTCCTaGGCCAGGCTGGGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTNDTCS*ARLGWH
Trigger: ATGCCAGCCCAGCCTGGCCCAGGAGCAGGTGTCGTT...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCACTGGGGCCATGCAGGTaGCAGATGTTGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPLGPCR*QMLGRG
Trigger: GCCTCTACCCAACATCTGCCACCTGCATGGCCCCAG...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCGGGCTCAGGTGGGTCTaGTGCTTCTGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCGLRWV*CFCGEG
Trigger: TCCCTCCCCACAGAAGCACCAGACCCACCTGAGCCC...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCGCTAGGGGCCCGTCATaGTGCCACTGCCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFARGPS*CHCPPP
Trigger: TGGAGGTGGGCAGTGGCACCATGACGGGCCCCTAGC...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGGTGGGCCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATTCTCCAGCTTTCCAGTaGCCCTTAACCATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GWALPSQADLARILPAWDSPAFQ*PLTMGH
Trigger: GTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGA...ATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGGCCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGCTCGCTGCCTCAAATaGCAGGCCCGGCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAARCLK*QARLPG
Trigger: ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CAA 72 bp AAGCAGCTAGACAACGGCAGTGGTGAGGGTCCCCACTaGGCATCAGCGATGTGGTCACTGCTGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KQLDNGSGEGPH*ASAMWSLLASS
Trigger: GGAACTGGCCAGCAGTGACCACATCGCTGATGCCAAGTGGGGACCCTCACCACTGCCGTTGTCTAGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATTCGCCTCCATCTTCCTCCTCCTTaGGGTTCTCCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PCRHRQTWLGYFQPGIRLHLPPP*GSPSSS
Trigger: GGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATG...GAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAACGTAGTTGTCCCGGATaGGAACATCGCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQRSCPG*EHRCLR
Trigger: CCTCAGACAGCGATGTTCTCATCCGGGACAACTACG...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCTTTCCACCCGGTCTGTaGTTTCAAACGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPFPPGL*FQTGWE
Trigger: CTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAA...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGGGCCAGCACAATCATaGCGGCGAAAGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHGPAQS*RRKRSI
Trigger: GATGGATCGCTTTCGCCGTCATGATTGTGCTGGCCC...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCGGGACCCCCAGGTCCTaGAGCAGTAGAAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCGTPRS*SSRRHV
Trigger: AACGTGCCTTCTACTGCTTCAGGACCTGGGGGTCCC...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATGGGACCCCCAGGTCCTaGAGCAGTAGAAGGCACGTT +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDGTPRS*SSRRHV
Trigger: AACGTGCCTTCTACTGCTTCAGGACCTGGGGGTCCC...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTAGTTTACTCCCACCTTaGCCTGGCCTGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGASLLPP*PGLHRG
Trigger: CCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACT...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATTGCTCTAGCCTCAGGTaGGGAACAGCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDCSSLR*GTARSC
Trigger: GCAGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCA...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCATGCTCTAGCCTCAGGTaGGGAACAGCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPCSSLR*GTARSC
Trigger: GCAGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCA...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAACTCCTGACCTCAGGTaGTCTGCCCGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTTPDLR*SARFSL
Trigger: GAGGCTGAAGCGGGCAGATCACCTGAGGTCAGGAGT...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR TCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTTGCTCTTCCCATCACTaGCCCCGGGGGCCCATCGAT +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGACSSHH*PRGPID
Trigger: ATCGATGGGCCCCCGGGGTCAGTGATGGGAAGAGCA...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417024.6
ENST00000582773.5
CDS-3UTR TCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCATGCTCTTCCCATCACTaGCCCCGGGGGCCCATCGAT +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPCSSHH*PRGPID
Trigger: ATCGATGGGCCCCCGGGGTCAGTGATGGGAAGAGCA...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417024.6
ENST00000582773.5
CDS-3UTR GCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQELRVG*SHGLYH
Trigger: GTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTC...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGATGGGCCGCTTCTCTaGCCGCTCGTAGTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGADGPLL*PLVVVP
Trigger: CGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACACACCGCAGGAGTCATTaGCAGTGGCGCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTHRRSH*QWRCRS
Trigger: TGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTG...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAAGATCGCCAAGTAGATaGGGTAGGCGTCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPRSPSR*GRRPLG
Trigger: GCCGAGTGGACGCCTACCGCATCTACTTGGCGATCT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGAGATCGCCAAGTAGATaGGGTAGGCGTCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKRSPSR*GRRPLG
Trigger: GCCGAGTGGACGCCTACCGCATCTACTTGGCGATCT...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATCGGAAAGGGGACCTGTaGTTGTTGCTGACCCCACAG +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHRKGDL*LLLTPQ
Trigger: CTGTGGGGTCAGCAACAAGCACAGGTCCCCTTTCCG...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTACCATGGGTCACCCTTaGTTGGGAATCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQATMGHP*LGICPQ
Trigger: CTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGT...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCGTTACCCCTCCAGTCTaGAATCAACACCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPVTPPV*NQHHWP
Trigger: GGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAAC...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACGCTGCCTGGTCCCAATaGAGAAAGTACCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYAAWSQ*RKYPMP
Trigger: TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGC...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCGGCGGCTGCCGCAGCTaGAGCACAGCCAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASGGCRS*STASSQ
Trigger: TTGGGAGCTGGCTGTGCTGCAGCTGCGGCAGCCGCC...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582330.2
CDS-3UTR CCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAAGTGGAGCTGCGCGTTaGCTGCAGCCATGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTSGAAR*LQPWPL
Trigger: TAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACT...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGTCCATCCTCTTCCAGTaGAGCTGCGCGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKSILFQ*SCALAA
Trigger: TGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGA...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTGGGGGTAATGAGGGATaGCAGAGAGTGCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSGGNEG*QRVLAH
Trigger: ATGTGCCAGCACTCTCTGCCATCCCTCATTACCCCC...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCGTGCCGCCCTCGCGGTaGAAGAGTGTCTTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSVPPSR*KSVFQL
Trigger: CAACTGGAAGACACTCTTCCACCGCGAGGGCGGCAC...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTCGTCACAGGCAGACCTaGCTAGGATACTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSRHRQT*LGYFQP
Trigger: AGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACG...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCTGGGCCAGGCTGGGCTaGCATCCTCTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAWARLG*HPLLLF
Trigger: GAAGAGCAGAAGAGGATGCCAGCCCAGCCTGGCCCA...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACACTGGGGCCATGCAGGTaGCAGATGTTGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTLGPCR*QMLGRG
Trigger: GCCTCTACCCAACATCTGCCACCTGCATGGCCCCAG...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCTGGGGCCATGCAGGTaGCAGATGTTGGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDLGPCR*QMLGRG
Trigger: GCCTCTACCCAACATCTGCCACCTGCATGGCCCCAG...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAGGTCTGGTGCTTCTGTaGGGAGGGAGGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQGLVLL*GGRQRK
Trigger: CTTTCTTTGCCTCCCTCCCCACAGAAGCACCAGACC...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGTGAGGACAGCTGTGTaGCTAGGGGCCCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAVRTAV*LGARHG
Trigger: ACCATGACGGGCCCCTAGCCACACAGCTGTCCTCAC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGTGAGGACAGCTGTGTaGCTAGGGGCCCGTCATGGT +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWVRTAV*LGARHG
Trigger: ACCATGACGGGCCCCTAGCCACACAGCTGTCCTCAC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTTGGGTCACCCTTGCTTaGGAATCTGCCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAWVTLA*ESAPRQ
Trigger: CTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCA...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGACCATTGGCCCCAGGTaGAAGGGATCCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKTIGPR*KGSQAL
Trigger: GAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGT...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCTGCAATCAACACCATTaGCCCCAGGTGGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTCNQHH*PQVEGI
Trigger: GATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCA...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGCAGGCCCGGCTGCCTaGTCCCAATGCAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAAGPAA*SQCRKY
Trigger: GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGGCAGGCCCGGCTGCCTaGTCCCAATGCAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQAGPAA*SQCRKY
Trigger: GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGC...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCATGGTCACGAAGCTCATaGAGCCCAGGAACACCAGCA +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPWSRSS*SPGTPA
Trigger: TGCTGGTGTTCCTGGGCTTCATGAGCTTCGTGACCA...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCAGGACGTCAAAGAAGGTaGACGGTCCGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPGRQRR*TVRGGE
Trigger: CTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCC...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGGACGTCAAAGAAGGTaGACGGTCCGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAGRQRR*TVRGGE
Trigger: CTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGGGCCAGCACAATCATaGCGGCGAAAGCGATCCATC +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWGPAQS*RRKRSI
Trigger: GATGGATCGCTTTCGCCGTCATGATTGTGCTGGCCC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGGAAGGCGGGGATaGCGTACTGGATGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASPGRRG*RTGCRC
Trigger: GCACCGGCATCCAGTACGTCATCCCCGCCTTCCTGG...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCACCAAGGGATATAGCGTaGACACTGAGCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPPRDIA*TLSTHA
Trigger: AGCGTGGGTGCTCAGTGTTCACGCTATATCCCTTGG...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CAGCAGACGGTCCCTTTCAGAGACAAGCTCCAGACTTTAGGCCCAGCTGGCAGGCCAAGGGATATAGCGTaGACACTGAGCACCCACGCT +
Preference number: 4 (lower is better)
Translates to: QQTVPFRDKLQTLGPAGRPRDIA*TLSTHA
Trigger: AGCGTGGGTGCTCAGTGTTCACGCTATATCCCTTGG...CCTGCCAGCTGGGCCTAAAGTCTGGAGCTTGTCTCTGAAAGGGACCGTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCACTCTTCCAGTGGAGCTaGGCGTTGGCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPLFQWS*ALAAAM
Trigger: CATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAG...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCAGCGCTGCAGGTCACCTaGATGAGGGAGAAGGGCACG +
Preference number: 4 (lower is better)
Translates to: ENAEFIRVTCVSQEASPAALQVT*MREKGT
Trigger: CGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGC...TGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGAGATCGCCAAGTAGATaGGGTAGGCGTCCACTCGGC +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWRSPSR*GRRPLG
Trigger: GCCGAGTGGACGCCTACCGCATCTACTTGGCGATCT...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ARCLKWQARLPGPNAESTREVRI*RYLVFW
Trigger: CCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCT...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAACTCCAGGTCGTGGGTaGAGAAGGCCACCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPTPGRG*RRPPAQ
Trigger: CTGTGCTGGTGGCCTTCTGCACCCACGACCTGGAGT...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAAGCCCAGCAAGTGCGTaGATGGCTGAGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPSPASA*MAEWEV
Trigger: CACCTCCCACTCAGCCATGCACGCACTTGCTGGGCT...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTCAGCGATGTGGTCACTaGTGGCCAGTTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAQRCGH*WPVPSR
Trigger: CCTGGAGGGAACTGGCCAGCAGTGACCACATCGCTG...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCACTCAGGTGGGTCTGGTaGTTCTGTGGGGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ENAEFIRVTCVSQEASPALRWVW*FCGEGG
Trigger: GCCTCCCTCCCCACAGAAGCACCAGACCCACCTGAG...TGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGTCCACCACCCAGCAGTaGTTCCCAGTCTATCACCTG +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKSTTQQ*FPVYHL
Trigger: CAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGA...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACACAGCCACTGCCCCTCTaGAGTGGCTTTCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: MRNTEVRRHRESGLRPITQPLPL*SGFPGA
Trigger: CGCTCCTGGAAAGCCACTGCAGAGGGGCAGTGGCTG...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAACCATGGGTCACCCTTaGTTGGGAATCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTTMGHP*LGICPQ
Trigger: CTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGT...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAAATGGCAGGCCCGGCTaGCTGGTCCCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTNGRPG*LVPMQK
Trigger: TTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATT...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCACGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPRWLQP*PLSQRW
Trigger: CCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACG...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCCGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLRWLQP*PLSQRW
Trigger: CCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACG...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCACGGCAGCAGCATAGATaGCGAGGTCTCCATACAGGT +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPRQQHR*RGLHTG
Trigger: ACCTGTATGGAGACCTCGCCATCTATGCTGCTGCCG...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCAGGAGTCATTGCCAGTaGCGCTGCAGGTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQARSHCQ*RCRSPA
Trigger: TGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCT...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCAGGAGTCATTGCCAGTaGCGCTGCAGGTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSRSHCQ*RCRSPA
Trigger: TGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCT...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGAGGAGTCATTGCCAGTaGCGCTGCAGGTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQRSHCQ*RCRSPA
Trigger: TGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCT...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACAACCAGCCTTGTGAGGTaGCGCTTGGAGGAGACGGGG +
Preference number: 4 (lower is better)
Translates to: MRNTEVRRHRESGLRPITTSLVR*RLEETG
Trigger: CCCCGTCTCCTCCAAGCGCCACCTCACAAGGCTGGT...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTTGCCCCATGAAGACCTaGGAGCAACTAAATCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSCPMKT*EQLNLG
Trigger: GCCCAGATTTAGTTGCTCCCAGGTCTTCATGGGGCA...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAATGGAAAGTGACACGTaGGGACAAGCTATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPMESDT*GQAMRN
Trigger: GTTTCTCATAGCTTGTCCCCACGTGTCACTTTCCAT...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATTCGCCTCTGTTTTTCCCGTGGATaGAAAGTGACACGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PCRHRQTWLGYFQPGIRLCFSRG*KVTRGD
Trigger: GTCCCCACGTGTCACTTTCCATCCACGGGAAAAACA...GAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGGTCTTCCTTGCTCTTaGCCTGACCACTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAGLPCS*PDHCRP
Trigger: GGGCCTGCAGTGGTCAGGCCAAGAGCAAGGAAGACC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCTGGGTCACCCTTGCTTaGGAATCTGCCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSWVTLA*ESAPRQ
Trigger: CTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCA...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGACCATTGGCCCCAGGTaGAAGGGATCCCAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQTIGPR*KGSQAL
Trigger: GAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGT...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGACCCAATGCCATGCCTaGCACATAATGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AEVTPPVCNQHHWPQVEGTQCHA*HIMTLS
Trigger: GCTGAGGGTCATTATGTGCCAGGCATGGCATTGGGT...CCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGGCAGGCCCGGCTGCCTaGTCCCAATGCAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRAGPAA*SQCRKY
Trigger: GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGC...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CAA 72 bp TCCAGCTTTCCAGTGGCCCTTAACCATGGGTCACCCTaGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SSFPVALNHGSP*LGNLPPDRTLP
Trigger: TGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAAAGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
3UTR CAA 72 bp AGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATaGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGGYPSSLQSTP*APGGRDPKLSP
Trigger: TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACATGGTCACGAAGCTCATaGAGCCCAGGAACACCAGCA +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTWSRSS*SPGTPA
Trigger: TGCTGGTGTTCCTGGGCTTCATGAGCTTCGTGACCA...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCATCTTCCTCCTCCTTaGGGTTCTCCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAHLPPP*GSPSSS
Trigger: GGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATG...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPENIAV*GCGGVV
Trigger: GACGACTCCTCCACAGCCTCAGACAGCGATGTTCTC...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFENIAV*GCGGVV
Trigger: GACGACTCCTCCACAGCCTCAGACAGCGATGTTCTC...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTTTCCACCCGGTCTGTaGTTTCAAACGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLFPPGL*FQTGWE
Trigger: CTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAA...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCGTCCGAGGAGGAGAGTaGAGATCGCCAAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAVRGGE*RSPSRC
Trigger: GCATCTACTTGGCGATCTTCACTCTCCTCCTCGGAC...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGTCCGAGGAGGAGAGTaGAGATCGCCAAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAVRGGE*RSPSRC
Trigger: GCATCTACTTGGCGATCTTCACTCTCCTCCTCGGAC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGTCCGAGGAGGAGAGTaGAGATCGCCAAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTVRGGE*RSPSRC
Trigger: GCATCTACTTGGCGATCTTCACTCTCCTCCTCGGAC...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCAACAGAGAAAGCGGGCTaGGGCCAATTACACCACGCA +
Preference number: 4 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPTEKAG*GQLHHA
Trigger: TGCGTGGTGTAATTGGCCTCAGCCCGCTTTCTCTGT...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAAGCTATGAGAAACACTaGGGTGCGACGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPSYEKH*GATAQR
Trigger: TCTCTGTGCCGTCGCACCTCAGTGTTTCTCATAGCT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCAGCTATGAGAAACACTaGGGTGCGACGGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLSYEKH*GATAQR
Trigger: TCTCTGTGCCGTCGCACCTCAGTGTTTCTCATAGCT...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCGTGGGGACAAGCTATaGGAAACACTGAGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDRGDKL*ETLRCD
Trigger: GTCGCACCTCAGTGTTTCTCATAGCTTGTCCCCACG...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCATGGAAACCACAAGCTaGGCTTGCCTACTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: TWRASITWGSLAVGVLCPMETTS*ACLLCQ
Trigger: TTGGCAAAGTAGGCAAGCTCAGCTTGTGGTTTCCAT...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCGATGGGCCGCTTCTCTaGCCGCTCGTAGTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASDGPLL*PLVVVP
Trigger: CGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATC...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCTCCACCACCCAGCAGTaGTTCCCAGTCTATCACCTG +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSSTTQQ*FPVYHL
Trigger: CAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGA...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAAAGTACCCAATGCCATaGCTGGCACATAATGACCCT +
Preference number: 4 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPKYPMP*LAHNDP
Trigger: AGGGTCATTATGTGCCAGGCATGGCATTGGGTACTT...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCACGCTGTCTGAGGCTGTaGAGGAGTCGTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPRCLRL*RSRHLP
Trigger: AGGAAGATGACGACTCCTCCACAGCCTCAGACAGCG...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCGCTGTCTGAGGCTGTaGAGGAGTCGTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSRCLRL*RSRHLP
Trigger: AGGAAGATGACGACTCCTCCACAGCCTCAGACAGCG...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACATCTGCACAGACAGGATaGGCCGCTTCTCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: MRNTEVRRHRESGLRPITSAQTG*AASLPA
Trigger: AGCGGGCAGAGAAGCGGCCCATCCTGTCTGTGCAGA...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCACGGCAGCAGCATAGATaGCGAGGTCTCCATACAGGT +
Preference number: 4 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPRQQHR*RGLHTG
Trigger: ACCTGTATGGAGACCTCGCCATCTATGCTGCTGCCG...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCACGGCAGCAGCATAGATaGCGAGGTCTCCATACAGGT +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSARQQHR*RGLHTG
Trigger: ACCTGTATGGAGACCTCGCCATCTATGCTGCTGCCG...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACGGATCTGCAGGTACTTaGTCTTCTGGACGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYGSAGT*SSGRQR
Trigger: TCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCC...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTAGGATACTTCCAGCCTaGGATTCGCCTCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLQSAINTIGPRWKGSQARILPA*DSPLKR
Trigger: CCTCTTCAGAGGCGAATCCCAGGCTGGAAGTATCCT...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCACGTCACAGGCAGACCTaGCTAGGATACTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSARHRQT*LGYFQP
Trigger: AGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACG...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATTTCTTGTTCTTGTCATaGGGCCAGCCAGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDFLFLS*GQPGPL
Trigger: GAGAGGGCCTGGCTGGCCCCATGACAAGAACAAGAA...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGCTTTTAGTGTTGGAGTaGGAGCACGGGCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQLLVLE*EHGQPD
Trigger: GTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAG...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTTGGCATCAGCGATGTaGTCACTGCTGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQLASAM*SLLASS
Trigger: GGAACTGGCCAGCAGTGACCACATCGCTGATGCCAA...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGAGAGCCAGCATCACCTaGGGCTCTCTTGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRRASIT*GSLAVG
Trigger: CCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCT...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCGGTCTGGTGCTTCTGTaGGGAGGGAGGCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAGLVLL*GGRQRK
Trigger: CTTTCTTTGCCTCCCTCCCCACAGAAGCACCAGACC...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGTCTCCAGCTTTCCAGTaGCCCTTAACCATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKSPAFQ*PLTMGH
Trigger: GTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGA...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAACCCAATGCCATGCCTaGCACATAATGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPTQCHA*HIMTLS
Trigger: GCTGAGGGTCATTATGTGCCAGGCATGGCATTGGGT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACCGTAGTTGTCCCGGATaGGAACATCGCTGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLASMERKVTSSDLQQEDRSCPG*EHRCLR
Trigger: CCTCAGACAGCGATGTTCTCATCCGGGACAACTACG...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCATACAGGTAAACGATaGTGCAGAAATAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: GGQVTEARCLKWQARLPGHTGKR*CRNRTS
Trigger: ACTTGTTCTATTTCTGCATCATCGTTTACCTGTATG...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCATACAGGTAAACGATaGTGCAGAAATAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSHTGKR*CRNRTS
Trigger: ACTTGTTCTATTTCTGCATCATCGTTTACCTGTATG...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACAGGACGTCAAAGAAGGTaGACGGTCCGAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: MRNTEVRRHRESGLRPITGRQRR*TVRGGE
Trigger: CTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCC...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCACAGAGAAAGCGGGCTaGGGCCAATTACACCACGCA +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFTEKAG*GQLHHA
Trigger: TGCGTGGTGTAATTGGCCTCAGCCCGCTTTCTCTGT...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCACCCGTGGATGGAAAGTaGCACGTGGGGACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPPVDGK*HVGTSY
Trigger: ATAGCTTGTCCCCACGTGTCACTTTCCATCCACGGG...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCAGACAACGGCAGTGGTaGGGGTCCCCACTTGGCATC +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASRQRQW*GSPLGI
Trigger: GATGCCAAGTGGGGACCCTCACCACTGCCGTTGTCT...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCGAAGGTGACCTCATCTaGCTTACAGCAGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCEGDLI*LTAGGH
Trigger: GTGTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTC...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGAAGGTGACCTCATCTaGCTTACAGCAGGAGGACAC +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAEGDLI*LTAGGH
Trigger: GTGTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAATTGTATTTGGTGTCTaGTTCCACACCGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQIVFGV*FHTAGV
Trigger: GACTCCTGCGGTGTGGAAGCAGACACCAAATACAAT...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHREVRI*RYLVFW
Trigger: CCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCT...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPREVRI*RYLVFW
Trigger: CCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGCCACCCACGGGTACGTaGCGCCCTCGCGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEPPTGT*RPRGGR
Trigger: TCTTCCACCGCGAGGGCGGCACGTACCCGTGGGTGG...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCTCTAGTAGGACCACCTaGACTGTAGGAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFSSRTT*TVGGPE
Trigger: CTCAGGGCCTCCTACAGTGCAGGTGGTCCTACTAGA...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACTCCACCACCCAGCAGTaGTTCCCAGTCTATCACCTG +
Preference number: 4 (lower is better)
Translates to: SLASMERKVTSSDLQQEDSTTQQ*FPVYHL
Trigger: CAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGA...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGAAGTACCCAATGCCATaGCTGGCACATAATGACCCT +
Preference number: 4 (lower is better)
Translates to: AEVTPPVCNQHHWPQVEGKYPMP*LAHNDP
Trigger: AGGGTCATTATGTGCCAGGCATGGCATTGGGTACTT...CCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGGCTGCCTGGTCCCAATaGAGAAAGTACCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQAAWSQ*RKYPMP
Trigger: TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGC...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCAAAGTGAGGAAGGGCTaGCAGCAGAGGTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCKVRKG*QQRFLR
Trigger: CCTAAGGAACCTCTGCTGCCAGCCCTTCCTCACTTT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGCGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRRWLQP*PLSQRW
Trigger: CCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACG...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCATGAGTCTTAGAACTTaGGAGCAGCCACGCGTCACC +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSMSLRT*EQPRVT
Trigger: GGTGACGCGTGGCTGCTCCCAAGTTCTAAGACTCAT...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGATGAGTCTTAGAACTTaGGAGCAGCCACGCGTCACC +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQMSLRT*EQPRVT
Trigger: GGTGACGCGTGGCTGCTCCCAAGTTCTAAGACTCAT...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGGGGGGTGAAGCGTGTTaGAAGATGTGGGAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRGGEAC*KMWERC
Trigger: ACACCTCTCCCACATCTTCCAACACGCTTCACCCCC...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCAGGATACTTCCAGCCTaGGATTCGCCTCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCRILPA*DSPLKR
Trigger: CCTCTTCAGAGGCGAATCCCAGGCTGGAAGTATCCT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCGGTGCCAGGTGGGGATaGCTTCCCTCTAGTAGGACC +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASGARWG*LPSSRT
Trigger: GGTCCTACTAGAGGGAAGCCATCCCCACCTGGCACC...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACCTTTTAGTGTTGGAGTaGGAGCACGGGCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLASMERKVTSSDLQQEDLLVLE*EHGQPD
Trigger: GTCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAG...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAAGTCGCAATGATAGATaGAGAAGGGGCATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPSRNDR*RRGICF
Trigger: AAAACAAATGCCCCTTCTCCATCTATCATTGCGACT...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCTTGGCATCAGCGATGTaGTCACTGCTGGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFLASAM*SLLASS
Trigger: GGAACTGGCCAGCAGTGACCACATCGCTGATGCCAA...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGGCCCCAAGCCCCATTaGCCGTCAGCGGCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEGPKPH*PSAAEA
Trigger: GGCTTCTGCCGCTGACGGCCAATGGGGCTTGGGGCC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLAGGRC*VEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGC...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCTGCAATCAACACCATTaGCCCCAGGTGGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQACNQHH*PQVEGI
Trigger: GATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCA...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATACCCAATGCCATGCCTaGCACATAATGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDTQCHA*HIMTLS
Trigger: GCTGAGGGTCATTATGTGCCAGGCATGGCATTGGGT...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCACATCTTCCTCCTCCTTaGGGTTCTCCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPHLPPP*GSPSSS
Trigger: GGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATG...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCATTTCCACCCGGTCTGTaGTTTCAAACGGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPFPPGL*FQTGWE
Trigger: CTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAA...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCGAGAGTGCTGGCACATaGAGGAGTAGACGCACACCC +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASESAGT*RSRRTP
Trigger: GGGTGTGCGTCTACTCCTTCATGTGCCAGCACTCTC...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGCAGGCGGCACCAGGGTaGTGGTGGGAAACACGACGC +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEQAAPG*WWETRR
Trigger: GCGTCGTGTTTCCCACCATCACCCTGGTGCCGCCTG...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCATCTAGTAGGACCACCTaGACTGTAGGAGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ENAEFIRVTCVSQEASPASSRTT*TVGGPE
Trigger: CTCAGGGCCTCCTACAGTGCAGGTGGTCCTACTAGA...TGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGTTGATGATGGCTaGAGTGAAACGTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSQVDDG*SETCRM
Trigger: CATCCGGCACGTTTCACTGCAGCCATCATCAACTTG...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTGTTACCCCTCCAGTCTaGAATCAACACCATTGGCCC +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAVTPPV*NQHHWP
Trigger: GGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAAC...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTGCCTGGTCCCAATaGAGAAAGTACCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPAAWSQ*RKYPMP
Trigger: TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGC...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAAAAGTGAGGAAGGGCTaGCAGCAGAGGTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPKVRKG*QQRFLR
Trigger: CCTAAGGAACCTCTGCTGCCAGCCCTTCCTCACTTT...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAGGATCTGCAGGTACTTaGTCTTCTGGACGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPGSAGT*SSGRQR
Trigger: TCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCC...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGCGTGTTGGAAGATGTaGGAGAGGTGTGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAACWKM*ERCDSS
Trigger: ACTGGAATCACACCTCTCCCACATCTTCCAACACGC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTTCTATCTGGGGACTCTaGTACCAGTTAGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSSIWGL*YQLALL
Trigger: AAGAAGTGCTAACTGGTACCAGAGTCCCCAGATAGA...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCCTCGCAGCTCTATCTaGGGACTCTGGTACCAGTTA +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFPRSSI*GLWYQL
Trigger: TAACTGGTACCAGAGTCCCCAGATAGAGCTGCGAGG...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCTCAGCGGCAGAAGCCTaGCATCGATGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASSAAEA*HRWRGR
Trigger: CCTTCCTCTCCATCGATGCCAGGCTTCTGCCGCTGA...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWAGGRC*VEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGCCTGGCATCGATGGAGAGGAAGGTGACCTCATCTGACTTACAGCAGGAGGACTCTCCAGCTTTCCAGTaGCCCTTAACCATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLASMERKVTSSDLQQEDSPAFQ*PLTMGH
Trigger: GTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGA...GTCCTCCTGCTGTAAGTCAGATGAGGTCACCTTCCTCTCCATCGATGCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCTCTCCAGCTTTCCAGTaGCCCTTAACCATGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFSPAFQ*PLTMGH
Trigger: GTGACCCATGGTTAAGGGCCACTGGAAAGCTGGAGA...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCTGCAATCAACACCATTaGCCCCAGGTGGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFCNQHH*PQVEGI
Trigger: GATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCA...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAACCCAATGCCATGCCTaGCACATAATGACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPTQCHA*HIMTLS
Trigger: GCTGAGGGTCATTATGTGCCAGGCATGGCATTGGGT...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGCTATCACAAAGGTGGTaGTCACGAAGCATGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWLSQRW*SRSMLA
Trigger: GGCCAACATGCTTCGTGACCACCACCTTTGTGATAG...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR CCA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCACCTCTATCACAAAGGTaGTGGTCACGAAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPPLSQR*WSRSML
Trigger: CAACATGCTTCGTGACCACCACCTTTGTGATAGAGG...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR GCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCATTGTATTTGGTGTCTaGTTCCACACCGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAIVFGV*FHTAGV
Trigger: GACTCCTGCGGTGTGGAAGCAGACACCAAATACAAT...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAREVRI*RYLVFW
Trigger: CCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCT...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTCAAGTTGATGATGGCTaGAGTGAAACGTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAQVDDG*SETCRM
Trigger: CATCCGGCACGTTTCACTGCAGCCATCATCAACTTG...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGAAGTACCCAATGCCATaGCTGGCACATAATGACCCT +
Preference number: 4 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWKYPMP*LAHNDP
Trigger: AGGGTCATTATGTGCCAGGCATGGCATTGGGTACTT...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCAGGTACTTGGTCTTCTaGACGTCAAAGAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLRYLVF*TSKKVN
Trigger: GTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCT...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp CAGCGGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGAGGTACTTGGTCTTCTaGACGTCAAAGAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QRRLPLQSAINTIGPRWKRYLVF*TSKKVN
Trigger: GTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCT...CTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCCGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGATCTGCAGGTACTTaGTCTTCTGGACGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTGSAGT*SSGRQR
Trigger: TCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCC...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCGGATCTGCAGGTACTTaGTCTTCTGGACGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSGSAGT*SSGRQR
Trigger: TCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCC...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATTCTATCTGGGGACTCTaGTACCAGTTAGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHSIWGL*YQLALL
Trigger: AAGAAGTGCTAACTGGTACCAGAGTCCCCAGATAGA...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCACCTCGCAGCTCTATCTaGGGACTCTGGTACCAGTTA +
Preference number: 4 (lower is better)
Translates to: ENAEFIRVTCVSQEASPAPRSSI*GLWYQL
Trigger: TAACTGGTACCAGAGTCCCCAGATAGAGCTGCGAGG...TGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAAAGAGGGAACGTAATTaGAGAAGGGTAGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RCLKWQARLPGPNAESTQKRERN*RRVVPD
Trigger: ATCTGGAACTACCCTTCTCCAATTACGTTCCCTCTT...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGTTTGGAGCCTCGGGTaGCAGGATGATTTAATTAGC +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAVWSLG*QDDLIS
Trigger: GCTAATTAAATCATCCTGCCACCCGAGGCTCCAAAC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGGGCTCAGGTGGGTCTaGTGCTTCTGTGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEGLRWV*CFCGEG
Trigger: TCCCTCCCCACAGAAGCACCAGACCCACCTGAGCCC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACATGCAATCAACACCATTaGCCCCAGGTGGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: MRNTEVRRHRESGLRPITCNQHH*PQVEGI
Trigger: GATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCA...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
3UTR CAA 72 bp TGGAAACCACAAGCTGAGCTTGCCTACTTTGCCAAGTaGATGATGGCTGCAGTGAAACGTGCCGGATGCACG +
Preference number: 4 (lower is better)
Translates to: WKPQAELAYFAK*MMAAVKRAGCT
Trigger: CGTGCATCCGGCACGTTTCACTGCAGCCATCATCAACTTGGCAAAGTAGGCAAGCTCAGCTTGTGGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCATCTTCCTCCTCCTTaGGGTTCTCCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASHLPPP*GSPSSS
Trigger: GGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATG...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGGAACACCAGCCTTGTaGGGTGGCGCTTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEGTPAL*GGAWRR
Trigger: TCTCCTCCAAGCGCCACCTCACAAGGCTGGTGTTCC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTATTGTATTTGGTGTCTaGTTCCACACCGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: IYKLAAAALASGEEQPGAIVFGV*FHTAGV
Trigger: GACTCCTGCGGTGTGGAAGCAGACACCAAATACAAT...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCAAGTACCCAATGCCATaGCTGGCACATAATGACCCT +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFKYPMP*LAHNDP
Trigger: AGGGTCATTATGTGCCAGGCATGGCATTGGGTACTT...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR GCA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCGCTGCCTGGTCCCAATaGAGAAAGTACCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: HVENAEFIRVTCVSQEASAAWSQ*RKYPMP
Trigger: TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGC...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAAGGTACTTGGTCTTCTaGACGTCAAAGAAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSARYLVF*TSKKVN
Trigger: GTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCT...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCATGGAAAGTGACACGTaGGGACAAGCTATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCMESDT*GQAMRN
Trigger: GTTTCTCATAGCTTGTCCCCACGTGTCACTTTCCAT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGGTTTGGAGCCTCGGGTaGCAGGATGATTTAATTAGC +
Preference number: 4 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRVWSLG*QDDLIS
Trigger: GCTAATTAAATCATCCTGCCACCCGAGGCTCCAAAC...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGTGAAACGTGCCGGATaGACGTGGAGAGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEVKRAG*TWRASI
Trigger: GATGCTGGCTCTCCACGTGCATCCGGCACGTTTCAC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGTCCATCCTCTTCCAGTaGAGCTGCGCGTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWESILFQ*SCALAA
Trigger: TGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGA...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATAAGAGGGAACGTAATTaGAGAAGGGTAGTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDKRERN*RRVVPD
Trigger: ATCTGGAACTACCCTTCTCCAATTACGTTCCCTCTT...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGTGGGTCACCCTTGCTTaGGAATCTGCCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEWVTLA*ESAPRQ
Trigger: CTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCA...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGCATGGCGATTTTGTTTaGCTTGACCACTCTGACAAA +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQHGDFV*LDHSDK
Trigger: TTTGTCAGAGTGGTCAAGCCAAACAAAATCGCCATG...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR CCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGGGGGTAATGAGGGATaGCAGAGAGTGCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEGGNEG*QRVLAH
Trigger: ATGTGCCAGCACTCTCTGCCATCCCTCATTACCCCC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CCA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCAGTCGCAATGATAGATaGAGAAGGGGCATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FTNEGGQVTEARCLKWQASRNDR*RRGICF
Trigger: AAAACAAATGCCCCTTCTCCATCTATCATTGCGACT...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR TCA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGCATACAGGTAAACGATaGTGCAGAAATAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQHTGKR*CRNRTS
Trigger: ACTTGTTCTATTTCTGCATCATCGTTTACCTGTATG...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR TCA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCATACAGGTAAACGATaGTGCAGAAATAGAACAAGT +
Preference number: 4 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFHTGKR*CRNRTS
Trigger: ACTTGTTCTATTTCTGCATCATCGTTTACCTGTATG...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGCAGGTGGCAGATGTTaGGTAGAGGCTGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEAGGRC*VEAVEF
Trigger: AAACTCAACAGCCTCTACCCAACATCTGCCACCTGC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR GCA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGATTGTATTTGGTGTCTaGTTCCACACCGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEIVFGV*FHTAGV
Trigger: GACTCCTGCGGTGTGGAAGCAGACACCAAATACAAT...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS TCA 90 bp CCAGGTCGTGGGTGCAGAAGGCCACCAGCACAGGCGGCACCAGGGTaGTGGTGGGAAACACGACGCGGTCCACCACCCACGGGTACGTGC +
Preference number: 5 (lower is better)
Translates to: PGRGCRRPPAQAAPG*WWETRRGPPPTGTC
Trigger: GCACGTACCCGTGGGTGGTGGACCGCGTCGTGTTTCCCACCATCACCCTGGTGCCGCCTGTGCTGGTGGCCTTCTGCACCCACGACCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAGACCCTGAGACCACCTaGGGCCCCGGGAGACCCTAC +
Preference number: 5 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPDPETT*GPGRPY
Trigger: GTAGGGTCTCCCGGGGCCCAAGGTGGTCTCAGGGTC...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAGCAGTGGCGAATGCCTaGGGCATGGTGAGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPAVANA*GMVSAP
Trigger: GGGCGCACTCACCATGCCCAAGGCATTCGCCACTGC...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCGGGTGCCCCTCCCCTaGTCCGTGCCCGATGCGGAT +
Preference number: 5 (lower is better)
Translates to: ARCLKWQARLPGPNAESTRVPLP*SVPDAD
Trigger: ATCCGCATCGGGCACGGACAAGGGGAGGGGCACCCG...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACGGGTGCCCCTCCCCTaGTCCGTGCCCGATGCGGAT +
Preference number: 5 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVRVPLP*SVPDAD
Trigger: ATCCGCATCGGGCACGGACAAGGGGAGGGGCACCCG...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTAAAGGGGACCTGTGCTaGTTGCTGACCCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: GRGGAARGLPEFPANPTPKGDLC*LLTPQP
Trigger: TGGCTGTGGGGTCAGCAACAAGCACAGGTCCCCTTT...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCAAGTTTACTCCCACCTaGACCTGGCCTGCACCGGGG +
Preference number: 5 (lower is better)
Translates to: RTGHGGSLPQMAGPAAWSKFTPT*TWPAPG
Trigger: CCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTT...GGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS TCA 90 bp AGCCCACCCAGAAGGTGTGGCGGAAAGGGGACCTGTGCTTGTTGCTaGCCCCACAGCCAAAGGCCAGCTGGGTGTCCCTGCGGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: SPPRRCGGKGTCACC*PHSQRPAGCPCGSG
Trigger: ACCACTGCCGCAGGGACACCCAGCTGGCCTTTGGCTGTGGGGTCAGCAACAAGCACAGGTCCCCTTTCCGCCACACCTTCTGGGTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCATGGGTCACCCTTGCTaGGGAATCTGCCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVMGHPC*GICPQT
Trigger: TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCAT...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CCA 90 bp AACACGACGCGGTCCACCACCCACGGGTACGTGCCGCCCTCGCGGTaGAAGAGTGTCTTCCAGTTGTTGCGCAGGGTCACGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: NTTRSTTHGYVPPSR*KSVFQLLRRVTAMM
Trigger: CATCATTGCCGTGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTACCCGTGGGTGGTGGACCGCGTCGTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAACAGTGGAGCTGCGCGTaGGCTGCAGCCATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RCLKWQARLPGPNAESTQQWSCA*AAAMAS
Trigger: AGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTG...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAACACCGCAGGAGTCATaGCCAGTGGCGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPTPQES*PVALQV
Trigger: GACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGT...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTTGGCCCCAAGCCCCATaGGCCGTCAGCGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAWPQAP*AVSGRS
Trigger: GCTTCTGCCGCTGACGGCCAATGGGGCTTGGGGCCA...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCCTGCAATCAACACCATaGGCCCCAGGTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCLQSTP*APGGRD
Trigger: ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAG...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS GCA 90 bp GAACACCAGCAGGACGAGGCTGACAAGCCACCCGGCAGTGGCGAATaGCTTGGGCATGGTGAGTGCGCCCGTGCCCACGATGAGGTTAAA +
Preference number: 5 (lower is better)
Translates to: EHQQDEADKPPGSGE*LGHGECARAHDEVK
Trigger: TTTAACCTCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCGTCCTGCTGGTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS GCA 90 bp GCGCAGGGGCCCCCAGCACCGGTCAGTGTCATTGTATTTGGTGTCTaGTTCCACACCGCAGGAGTCATTGCCAGTGGCGCTGCAGGTCAC +
Preference number: 5 (lower is better)
Translates to: AQGPPAPVSVIVFGV*FHTAGVIASGAAGH
Trigger: GTGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGTGGAAGCAGACACCAAATACAATGACACTGACCGGTGCTGGGGGCCCCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCGTGATTTCAAACGGGTaGGGAGATCCACGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GHGGSLPQMAGPAAWSQCVISNG*GDPRLC
Trigger: GCAGAGACGTGGATCTCCCAACCCGTTTGAAATCAC...GCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTACACCGCAGGAGTCATaGCCAGTGGCGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSTPQES*PVALQV
Trigger: GACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGT...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGCAGAGGTGGCGCAGCCCGTGGGCTCCCCGAGTTCCCTGCAAATCCCACCCCTCACCGGTCAGTGTCATaGTATTTGGTGTCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GRGGAARGLPEFPANPTPHRSVS*YLVSAS
Trigger: GGAAGCAGACACCAAATACAATGACACTGACCGGTG...AGGGGTGGGATTTGCAGGGAACTCGGGGAGCCCACGGGCTGCGCCACCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCCGAGTTCCCTGCAAATCCCACCCCTGACCCTGAGACCACCTTGGGCCCCGGGATTTGCGTCCAAGATTaGGTTTGGAGCCTCGGGTGG +
Preference number: 5 (lower is better)
Translates to: PEFPANPTPDPETTLGPGICVQD*VWSLGW
Trigger: CCACCCGAGGCTCCAAACCAAATCTTGGACGCAAAT...CCCGGGGCCCAAGGTGGTCTCAGGGTCAGGGGTGGGATTTGCAGGGAACTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTGGCCTTTGCCTGTaGCCGAGGCTGCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLSGLCL*PRLLPA
Trigger: GGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAGA...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAGGCCTGGAACCATGGGTCACCCTaGCTTGGGAATCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PCLGICPQTGRFHFPQAWNHGSP*LGNLPP
Trigger: TGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTT...CCAGGCCTGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS GCA 90 bp GCTGACAAGCCACCCGGCAGTGGCGAATGCCTTGGGCATGGTGAGTaGGCCCGTGCCCACGATGAGGTTAAACATGTACACCAGCCCAAC +
Preference number: 5 (lower is better)
Translates to: ADKPPGSGECLGHGE*ARAHDEVKHVHQPN
Trigger: GTTGGGCTGGTGTACATGTTTAACCTCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS-3UTR CAA 90 bp TTCCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGCAGTGGCGAATGCCTaGGGCATGGTGAGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: FQWPLTMGHPCLGICPQTAVANA*GMVSAP
Trigger: GGGCGCACTCACCATGCCCAAGGCATTCGCCACTGC...TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGCAGTGGCGAATGCCTaGGGCATGGTGAGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWAVANA*GMVSAP
Trigger: GGGCGCACTCACCATGCCCAAGGCATTCGCCACTGC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCAGTGGAGCTGCGCGTaGGCTGCAGCCATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDQWSCA*AAAMAS
Trigger: AGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTG...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp AGCTCGCGCCCACAGCGAGGGCCCTCGCAGCTCTATCTGGGGACTCTGGTACCAGTGATTTCAAACGGGTaGGGAGATCCACGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SSRPQRGPSQLYLGTLVPVISNG*GDPRLC
Trigger: GCAGAGACGTGGATCTCCCAACCCGTTTGAAATCAC...TGGTACCAGAGTCCCCAGATAGAGCTGCGAGGGCCCTCGCTGTGGGCGCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGGAACATGGAGGCCATTaGTCCCATTTCCACCCGGTC +
Preference number: 5 (lower is better)
Translates to: NEGGQVTEARCLKWQARLEHGGH*SHFHPV
Trigger: GACCGGGTGGAAATGGGACAAATGGCCTCCATGTTC...CAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CCCTGCCGTCACAGGCAGACCTGGCTAGGATACTTCCAGCCTGGGATTCGCCTCAAAGGGGACCTGTGCTaGTTGCTGACCCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: PCRHRQTWLGYFQPGIRLKGDLC*LLTPQP
Trigger: TGGCTGTGGGGTCAGCAACAAGCACAGGTCCCCTTT...GAGGCGAATCCCAGGCTGGAAGTATCCTAGCCAGGTCTGCCTGTGACGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAAAGTTTACTCCCACCTaGACCTGGCCTGCACCGGGG +
Preference number: 5 (lower is better)
Translates to: RCLKWQARLPGPNAESTQKFTPT*TWPAPG
Trigger: CCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTT...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCTCTGGCCTTTGCCTGTaGCCGAGGCTGCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: FTNEGGQVTEARCLKWQASGLCL*PRLLPA
Trigger: GGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAGA...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCATCTGGCCTTTGCCTGTaGCCGAGGCTGCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSASGLCL*PRLLPA
Trigger: GGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAGA...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GCCCCATCCAACCCCACATTGCCCAAGGGATATAGCGTGAACACTGAGCACCCAACACCGCAGGAGTCATaGCCAGTGGCGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: APSNPTLPKGYSVNTEHPTPQES*PVALQV
Trigger: GACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGT...TGGGTGCTCAGTGTTCACGCTATATCCCTTGGGCAATGTGGGGTTGGATGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCACACCGCAGGAGTCATaGCCAGTGGCGCTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: FTNEGGQVTEARCLKWQATPQES*PVALQV
Trigger: GACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGT...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTTCAGTGTCATTGTATTaGGTGTCTGCTTCCACACCG +
Preference number: 5 (lower is better)
Translates to: GGQVTEARCLKWQARLPGSVSLY*VSASTP
Trigger: CGGTGTGGAAGCAGACACCAAATACAATGACACTGA...ACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCTCAGTGTCATTGTATTaGGTGTCTGCTTCCACACCG +
Preference number: 5 (lower is better)
Translates to: EDRSRRLAASNGRPGCLVSVSLY*VSASTP
Trigger: CGGTGTGGAAGCAGACACCAAATACAATGACACTGA...GACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACGTGGAGAGCCAGCATCACCTGGGGCTCTCTTGCTGTTGGGGTTCTCTGCCCCTCACAGCGCGCGAAGTaGAGGGTGTACATGTCCATG +
Preference number: 5 (lower is better)
Translates to: TWRASITWGSLAVGVLCPSQRAK*RVYMSM
Trigger: CATGGACATGTACACCCTCAACTTCGCGCGCTGTGA...GGGGCAGAGAACCCCAACAGCAAGAGAGCCCCAGGTGATGCTGGCTCTCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCGGTGAGGGTCCCCACTaGGCATCAGCGATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLGEGPH*ASAMWS
Trigger: TGACCACATCGCTGATGCCAAGTGGGGACCCTCACC...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAATGGGTCACCCTTGCTaGGGAATCTGCCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: RCLKWQARLPGPNAESTQMGHPC*GICPQT
Trigger: TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCAT...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS TCA 90 bp CAGACAGGATGGGCCGCTTCTCTGCCCGCTCGTAGTTGTCCCGGATaGGAACATCGCTGTCTGAGGCTGTGGAGGAGTCGTCATCTTCCT +
Preference number: 5 (lower is better)
Translates to: QTGWAASLPARSCPG*EHRCLRLWRSRHLP
Trigger: AGGAAGATGACGACTCCTCCACAGCCTCAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATCCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS CCA 90 bp CAGCCTTGTGAGGTGGCGCTTGGAGGAGACGGGGGTAATGAGGGATaGCAGAGAGTGCTGGCACATGAAGGAGTAGACGCACACCCCAAA +
Preference number: 5 (lower is better)
Translates to: QPCEVALGGDGGNEG*QRVLAHEGVDAHPK
Trigger: TTTGGGGTGTGCGTCTACTCCTTCATGTGCCAGCACTCTCTGCCATCCCTCATTACCCCCGTCTCCTCCAAGCGCCACCTCACAAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CCA 90 bp GGTTCTCCATCCTCTTCCAGTGGAGCTGCGCGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGGTGGTCACGAAGCATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GSPSSSSGAARWLQP*PLSQRWWSRSMLAR
Trigger: CCTGGCCAACATGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGAGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR CAA 90 bp AGGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTAGAACATGGAGGCCATTaGTCCCATTTCCACCCGGTC +
Preference number: 5 (lower is better)
Translates to: RLAASNGRPGCLVPMQKVEHGGH*SHFHPV
Trigger: GACCGGGTGGAAATGGGACAAATGGCCTCCATGTTC...TACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGCTTGTGAGGTGGCGCTaGGAGGAGACGGGGGTAATG +
Preference number: 5 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWLVRWR*EETGVM
Trigger: CATTACCCCCGTCTCCTCCAAGCGCCACCTCACAAG...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGAAGAGTGTCTTCCAGTaGTTGCGCAGGGTCACGGCA +
Preference number: 5 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRKSVFQ*LRRVTA
Trigger: TGCCGTGACCCTGCGCAACAACTGGAAGACACTCTT...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACTCCTGCCATCAGAGCTaGGTCTCGCTGAGGATGATA +
Preference number: 5 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYSCHQS*VSLRMI
Trigger: TATCATCCTCAGCGAGACCAAGCTCTGATGGCAGGA...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTCCATCCAACCCCACATaGCCCAAGGGATATAGCGTG +
Preference number: 5 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSPSNPT*PKGYSV
Trigger: CACGCTATATCCCTTGGGCAATGTGGGGTTGGATGG...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCTGGCCCCAAGCCCCATaGGCCGTCAGCGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: HVENAEFIRVTCVSQEASWPQAP*AVSGRS
Trigger: GCTTCTGCCGCTGACGGCCAATGGGGCTTGGGGCCA...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGAAGTTTACTCCCACCTaGACCTGGCCTGCACCGGGG +
Preference number: 5 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWKFTPT*TWPAPG
Trigger: CCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTT...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATATGGGTCACCCTTGCTaGGGAATCTGCCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHMGHPC*GICPQT
Trigger: TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCAT...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCAGTGGCCCTTAACCATGGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGCTGCAATCAACACCATaGGCCCCAGGTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: PVALNHGSPLLGNLPPDRLQSTP*APGGRD
Trigger: ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAG...CCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTTAAGGGCCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS GCA 90 bp GACCCCGGGGGCCCATCGATCCATCTCATCAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGGACGTCAAAGAAGGTGAACGGTCCG +
Preference number: 5 (lower is better)
Translates to: DPGGPSIHLIREVRI*RYLVFWTSKKVNGP
Trigger: CGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGATCGATGGGCCCCCGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417024.6
ENST00000582773.5
CDS-3UTR CAA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTGAACATGGAGGCCATTaGTCCCATTTCCACCCGGTC +
Preference number: 5 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAEHGGH*SHFHPV
Trigger: GACCGGGTGGAAATGGGACAAATGGCCTCCATGTTC...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCACCGGTCAGTGTCATaGTATTTGGTGTCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYHRSVS*YLVSAS
Trigger: GGAAGCAGACACCAAATACAATGACACTGACCGGTG...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACAGGATCTGCAGGTACTaGGTCTTCTGGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSLPQMAGPAAWSQCRKYRICRY*VFWTSK
Trigger: CTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCT...GTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTCTTGTGAGGTGGCGCTaGGAGGAGACGGGGGTAATG +
Preference number: 5 (lower is better)
Translates to: IYKLAAAALASGEEQPGALVRWR*EETGVM
Trigger: CATTACCCCCGTCTCCTCCAAGCGCCACCTCACAAG...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAAGTGTCTTCCAGTTGTaGCGCAGGGTCACGGCAATG +
Preference number: 5 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPSVFQL*RRVTAM
Trigger: CATTGCCGTGACCCTGCGCAACAACTGGAAGACACT...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTAGTGTCTTCCAGTTGTaGCGCAGGGTCACGGCAATG +
Preference number: 5 (lower is better)
Translates to: PLQSAINTIGPRWKGSQASVFQL*RRVTAM
Trigger: CATTGCCGTGACCCTGCGCAACAACTGGAAGACACT...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CTACCCAACCTGAGAGGCCTCCTGGGAGGAAGTCGCAATGATAGATGGAGAAGGGGGGACCTGTGCTTGTaGCTGACCCCACAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: LPNLRGLLGGSRNDRWRRGDLCL*LTPQPK
Trigger: CTTTGGCTGTGGGGTCAGCAACAAGCACAGGTCCCC...CCTTCTCCATCTATCATTGCGACTTCCTCCCAGGAGGCCTCTCAGGTTGGGTAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCCATCCAACCCCACATaGCCCAAGGGATATAGCGTG +
Preference number: 5 (lower is better)
Translates to: PLQSAINTIGPRWKGSQAPSNPT*PKGYSV
Trigger: CACGCTATATCCCTTGGGCAATGTGGGGTTGGATGG...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCAGATGTTGGGTAGAGGCTGTTGAGTTTAAGCTTTCCTCCACAACGACACCTGACCCTGAGACCACCTaGGGCCCCGGGAGACCCTAC +
Preference number: 5 (lower is better)
Translates to: GRCWVEAVEFKLSSTTTPDPETT*GPGRPY
Trigger: GTAGGGTCTCCCGGGGCCCAAGGTGGTCTCAGGGTC...AGGTGTCGTTGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCAACATCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCGGTGAGGGTCCCCACTaGGCATCAGCGATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFGEGPH*ASAMWS
Trigger: TGACCACATCGCTGATGCCAAGTGGGGACCCTCACC...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAAAGTTTACTCCCACCTaGACCTGGCCTGCACCGGGG +
Preference number: 5 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPKFTPT*TWPAPG
Trigger: CCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTT...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAATGGGTCACCCTTGCTaGGGAATCTGCCCCCAGACA +
Preference number: 5 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAMGHPC*GICPQT
Trigger: TGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCCAT...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCCTGCAATCAACACCATaGGCCCCAGGTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: PSSLQSTPLAPGGRDPKLLQSTP*APGGRD
Trigger: ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAG...GAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS TCA 90 bp CTTCTCTGCCCGCTCGTAGTTGTCCCGGATGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTCATCTTCCTCCTCCTTGAGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LLCPLVVVPDENIAV*GCGGVVIFLLLEVL
Trigger: GAGAACCTCAAGGAGGAGGAAGATGACGACTCCTCCACAGCCTCAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGGGCAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS GCA 90 bp CTCCTTGAGGTTCTCCATCCTCTTCCAGTGGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCACAAAGGTGGTGGTCACGAAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LLEVLHPLPVELRVG*SHGLYHKGGGHEAH
Trigger: ATGAGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGAGAACCTCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS GCA 90 bp TCATCTTCCTCCTCCTTGAGGTTCTCCATCCTCTTCCAGTGGAGCTaGGCGTTGGCTGCAGCCATGGCCTCTATCACAAAGGTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SSSSSLRFSILFQWS*ALAAAMASITKVVV
Trigger: GACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS GCA 90 bp CTCCTTGAGGTTCTCCATCCTCTTCCAGTGGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCACAAAGGTGGTGGTCACGAAGCATGT +
Preference number: 5 (lower is better)
Translates to: LLEVLHPLPVELRVG*SHGLYHKGGGHEAC
Trigger: ACATGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGAGAACCTCAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR CAA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTCACCGGTCAGTGTCATaGTATTTGGTGTCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSHRSVS*YLVSAS
Trigger: GGAAGCAGACACCAAATACAATGACACTGACCGGTG...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAAAGGATCTGCAGGTACTaGGTCTTCTGGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: RCLKWQARLPGPNAESTQRICRY*VFWTSK
Trigger: CTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCT...TTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp TTAGAACTTGGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGAGGATCTGCAGGTACTaGGTCTTCTGGACGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LELGSSHASPRQKDLVGERICRY*VFWTSK
Trigger: CTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCT...CTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCAAGAGTGTCTTCCAGTaGTTGCGCAGGGTCACGGCA +
Preference number: 5 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCKSVFQ*LRRVTA
Trigger: TGCCGTGACCCTGCGCAACAACTGGAAGACACTCTT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCCCAGCAGGGGACCTGTGCTTGTaGCTGACCCCACAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ENAEFIRVTCVSQEASPAGDLCL*LTPQPK
Trigger: CTTTGGCTGTGGGGTCAGCAACAAGCACAGGTCCCC...TGCTGGGCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTTCCTGCCATCAGAGCTaGGTCTCGCTGAGGATGATA +
Preference number: 5 (lower is better)
Translates to: PLQSAINTIGPRWKGSQASCHQS*VSLRMI
Trigger: TATCATCCTCAGCGAGACCAAGCTCTGATGGCAGGA...AGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGGTCACCCTTGCTTGGGAATCTGCCCCCAGACAGGACGCTTCCACTTCCCCCAATGGAGAAGGGGCATTaGTTTTTCCCGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: GSPLLGNLPPDRTLPLPPMEKGH*FFPWME
Trigger: TTCCATCCACGGGAAAAACAAATGCCCCTTCTCCAT...TGGGGGAAGTGGAAGCGTCCTGTCTGGGGGCAGATTCCCAAGCAAGGGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GCTCGCTGCCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCGCCTACTTTGCCAAGTaGATGATGGCTGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: ARCLKWQARLPGPNAESTAYFAK*MMAAVK
Trigger: TTTCACTGCAGCCATCATCAACTTGGCAAAGTAGGC...GGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGGCAGCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCAGATGTTGGGTAGAGGCTGTTGAGTTTAAGCTTTCCTCCACAACGACACCTTCTGGCCTTTGCCTGTaGCCGAGGCTGCTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GRCWVEAVEFKLSSTTTPSGLCL*PRLLPA
Trigger: GGCAGGGAGCAGCCTCGGCAACAGGCAAAGGCCAGA...AGGTGTCGTTGTGGAGGAAAGCTTAAACTCAACAGCCTCTACCCAACATCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAAACCATGGGTCACCCTaGCTTGGGAATCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPNHGSP*LGNLPP
Trigger: TGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTT...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTAACCATGGGTCACCCTaGCTTGGGAATCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: IYKLAAAALASGEEQPGANHGSP*LGNLPP
Trigger: TGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTT...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS TCA 90 bp GTAGAGTTCCCCGGTCTCTGTAATTTCACCCGCCATTTCCAAAAGTaGGGAAGGGCTGGCAGCAGAGGTTCCTTAGGTGCAAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: VEFPGLCNFTRHFQK*GRAGSRGSLGARTA
Trigger: CGCCGTCCTTGCACCTAAGGAACCTCTGCTGCCAGCCCTTCCTCACTTTTGGAAATGGCGGGTGAAATTACAGAGACCGGGGAACTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS TCA 90 bp CTTCTCTGCCCGCTCGTAGTTGTCCCGGATGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTCATCTTCCTCCTCGTAGGAAGAGTA +
Preference number: 5 (lower is better)
Translates to: LLCPLVVVPDENIAV*GCGGVVIFLLVGRV
Trigger: TACTCTTCCTACGAGGAGGAAGATGACGACTCCTCCACAGCCTCAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGGGCAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578764.5
CDS-3UTR CAA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATGTGATTTCAAACGGGTaGGGAGATCCACGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDVISNG*GDPRLC
Trigger: GCAGAGACGTGGATCTCCCAACCCGTTTGAAATCAC...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCGAACATGGAGGCCATTaGTCCCATTTCCACCCGGTC +
Preference number: 5 (lower is better)
Translates to: QSTPLAPGGRDPKLSPAFEHGGH*SHFHPV
Trigger: GACCGGGTGGAAATGGGACAAATGGCCTCCATGTTC...GAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp TTAGAACTTGGGAGCAGCCACGCGTCACCCAGGCAGAAGGACCTGGTGGGAGAGTCAGTGTCATTGTATTaGGTGTCTGCTTCCACACCG +
Preference number: 5 (lower is better)
Translates to: LELGSSHASPRQKDLVGESVSLY*VSASTP
Trigger: CGGTGTGGAAGCAGACACCAAATACAATGACACTGA...CTCTCCCACCAGGTCCTTCTGCCTGGGTGACGCGTGGCTGCTCCCAAGTTCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATCACCGGTCAGTGTCATaGTATTTGGTGTCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHHRSVS*YLVSAS
Trigger: GGAAGCAGACACCAAATACAATGACACTGACCGGTG...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTTCACAGCGCGCGAAGTaGAGGGTGTACATGTCCATG +
Preference number: 5 (lower is better)
Translates to: IYKLAAAALASGEEQPGASQRAK*RVYMSM
Trigger: CATGGACATGTACACCCTCAACTTCGCGCGCTGTGA...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCATTTGCGTCCAAGATTaGGTTTGGAGCCTCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCICVQD*VWSLGW
Trigger: CCACCCGAGGCTCCAAACCAAATCTTGGACGCAAAT...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGTGATTTCAAACGGGTaGGGAGATCCACGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPVISNG*GDPRLC
Trigger: GCAGAGACGTGGATCTCCCAACCCGTTTGAAATCAC...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACCTCCACCACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTTTGACCCCCACTTTATaGAAGAACATGGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: TSTTQQCFPVYHLPSAPSLTPTL*KNMEAI
Trigger: AATGGCCTCCATGTTCTTCAATAAAGTGGGGGTCAA...AGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGTGGTGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp CACGTTGAAAATGCAGAGTTCATTCGAGTCACCTGTGTTTCCCAGGAGGCCAGCAACCATGGGTCACCCTaGCTTGGGAATCTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: HVENAEFIRVTCVSQEASNHGSP*LGNLPP
Trigger: TGGGGGCAGATTCCCAAGCAAGGGTGACCCATGGTT...GCTGGCCTCCTGGGAAACACAGGTGACTCGAATGAACTCTGCATTTTCAACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp ATGAGAAACACTGAGGTGCGACGGCACAGAGAAAGCGGGCTGAGGCCAATTACACTGCAATCAACACCATaGGCCCCAGGTGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: MRNTEVRRHRESGLRPITLQSTP*APGGRD
Trigger: ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAG...TGTAATTGGCCTCAGCCCGCTTTCTCTGTGCCGTCGCACCTCAGTGTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp CCTCAAATGGCAGGCCCGGCTGCCTGGTCCCAATGCAGAAAGTACCCAATGCCAGCGATTTTGTTTGGCTaGACCACTCTGACAAACACG +
Preference number: 5 (lower is better)
Translates to: PQMAGPAAWSQCRKYPMPAILFG*TTLTNT
Trigger: CGTGTTTGTCAGAGTGGTCAAGCCAAACAAAATCGC...TGGCATTGGGTACTTTCTGCATTGGGACCAGGCAGCCGGGCCTGCCATTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS-3UTR CAA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTCAGTGTCATTGTATTaGGTGTCTGCTTCCACACCG +
Preference number: 5 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQSVSLY*VSASTP
Trigger: CGGTGTGGAAGCAGACACCAAATACAATGACACTGA...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCTCGCTGAGGATGATATaGGCCGTGACGAAAATGAAG +
Preference number: 5 (lower is better)
Translates to: FTNEGGQVTEARCLKWQASLRMI*AVTKMK
Trigger: CTTCATTTTCGTCACGGCCAATATCATCCTCAGCGA...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCATCGCTGAGGATGATATaGGCCGTGACGAAAATGAAG +
Preference number: 5 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSASLRMI*AVTKMK
Trigger: CTTCATTTTCGTCACGGCCAATATCATCCTCAGCGA...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AAGAAAGTTTACTCCCACCTTGACCTGGCCTGCACCGGGGGCATCTGGGGCCATGCAGTAGAAGGCACGTaGAAAATGCAGAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: KKVYSHLDLACTGGIWGHAVEGT*KMQSSF
Trigger: GAATGAACTCTGCATTTTCAACGTGCCTTCTACTGC...ATGGCCCCAGATGCCCCCGGTGCAGGCCAGGTCAAGGTGGGAGTAAACTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCATGGAGAAGGGGCATTaGTTTTTCCCGTGGATGGAA +
Preference number: 5 (lower is better)
Translates to: RLPLQSAINTIGPRWKGSMEKGH*FFPWME
Trigger: TTCCATCCACGGGAAAAACAAATGCCCCTTCTCCAT...GGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCGCCTACTTTGCCAAGTaGATGATGGCTGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAAYFAK*MMAAVK
Trigger: TTTCACTGCAGCCATCATCAACTTGGCAAAGTAGGC...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp ATGCCATGCCTGGCACATAATGACCCTCAGCGGAGGTTACCCCTCCAGTCTGCAGCTTTATTGAGCATTTaGGGCTGGGCACTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: MPCLAHNDPQRRLPLQSAALLSI*GWALSS
Trigger: TGAGCTTAGTGCCCAGCCCAAAATGCTCAATAAAGC...TGCAGACTGGAGGGGTAACCTCCGCTGAGGGTCATTATGTGCCAGGCATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGCTTTATTGAGCATTTaGGGCTGGGCACTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWALLSI*GWALSS
Trigger: TGAGCTTAGTGCCCAGCCCAAAATGCTCAATAAAGC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GGAGGTTACCCCTCCAGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATAACAGCATGGCGATTTaGTTTGGCTTGACCACTCTG +
Preference number: 5 (lower is better)
Translates to: GGYPSSLQSTPLAPGGRDNSMAI*FGLTTL
Trigger: CAGAGTGGTCAAGCCAAACAAAATCGCCATGCTGTT...ATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACTGGAGGGGTAACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS GCA 90 bp ATCATGACGGCGAAAGCGATCCATCTCATCAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGGACGTCAAAGAAGGTGAACGGTCCG +
Preference number: 5 (lower is better)
Translates to: IMTAKAIHLIREVRI*RYLVFWTSKKVNGP
Trigger: CGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGATCGCTTTCGCCGTCATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp TCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTCCAGTTGACCCCCACTTTATaGAAGAACATGGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: STPLAPGGRDPKLSPAFQLTPTL*KNMEAI
Trigger: AATGGCCTCCATGTTCTTCAATAAAGTGGGGGTCAA...CTGGAAAGCTGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ACCCAGCAGTGCTTCCCAGTCTATCACCTGCCATCCGCCCCATCTATAAGCTGGGCAGTAGAAGGCACGTaGAAAATGCAGAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: TQQCFPVYHLPSAPSISWAVEGT*KMQSSF
Trigger: GAATGAACTCTGCATTTTCAACGTGCCTTCTACTGC...CCAGCTTATAGATGGGGCGGATGGCAGGTGATAGACTGGGAAGCACTGCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp GGCATGGGTCTGGGACAAATGATGGCAGTGCCAGCACTGCATCTCCCATTGTGCGTAGTTCCAGATGTTTaGAGTTTTCAGCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: GMGLGQMMAVPALHLPLCVVPDV*SFQPQW
Trigger: CCACTGTGGCTGAAAACTCAAAACATCTGGAACTAC...GCACAATGGGAGATGCAGTGCTGGCACTGCCATCATTTGTCCCAGACCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp TTTACAAATGAGGGAGGACAGGTCACGGAGGCTCGCTGCCTCAAATGGCAGGCCGTAGTTCCAGATGTTTaGAGTTTTCAGCCACAGTGG +
Preference number: 5 (lower is better)
Translates to: FTNEGGQVTEARCLKWQAVVPDV*SFQPQW
Trigger: CCACTGTGGCTGAAAACTCAAAACATCTGGAACTAC...GGCCTGCCATTTGAGGCAGCGAGCCTCCGTGACCTGTCCTCCCTCATTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS-3UTR CAA 90 bp AGTCTGCAATCAACACCATTGGCCCCAGGTGGAAGGGATCCCAAGCTCTCTCCAGCTTTATTGAGCATTTaGGGCTGGGCACTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: SLQSTPLAPGGRDPKLSPALLSI*GWALSS
Trigger: TGAGCTTAGTGCCCAGCCCAAAATGCTCAATAAAGC...TGGAGAGAGCTTGGGATCCCTTCCACCTGGGGCCAATGGTGTTGATTGCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CCA 90 bp ATCCATCTCATCAGAGAGGTCAGGATCTGCAGGTACTTGGTCTTCTaGACGTCAAAGAAGGTGAACGGTCCGAGGAGGAGAGTGAAGATC +
Preference number: 5 (lower is better)
Translates to: IHLIREVRICRYLVF*TSKKVNGPRRRVKI
Trigger: GATCTTCACTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp ATCTATAAGCTGGCAGCTGCTGCTCTAGCCTCAGGTGAGGAACAGCCAGGAGCTTTGACCCCCACTTTATaGAAGAACATGGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: IYKLAAAALASGEEQPGALTPTL*KNMEAI
Trigger: AATGGCCTCCATGTTCTTCAATAAAGTGGGGGTCAA...AGCTCCTGGCTGTTCCTCACCTGAGGCTAGAGCAGCAGCTGCCAGCTTATAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS-3UTR CAA 90 bp GTTGGAAGATGTGGGAGAGGTGTGATTCCAGTAATGAGTCTTAGAACTTGGGAGGCTTTATTGAGCATTTaGGGCTGGGCACTAAGCTCA +
Preference number: 5 (lower is better)
Translates to: VGRCGRGVIPVMSLRTWEALLSI*GWALSS
Trigger: TGAGCTTAGTGCCCAGCCCAAAATGCTCAATAAAGC...CTCCCAAGTTCTAAGACTCATTACTGGAATCACACCTCTCCCACATCTTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS TCA 72 bp GGGTGCAGAAGGCCACCAGCACAGGCGGCACCAGGGTaGTGGTGGGAAACACGACGCGGTCCACCACCCACG +
Preference number: 6 (lower is better)
Translates to: GCRRPPAQAAPG*WWETRRGPPPT
Trigger: CGTGGGTGGTGGACCGCGTCGTGTTTCCCACCATCACCCTGGTGCCGCCTGTGCTGGTGGCCTTCTGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS TCA 72 bp TGTCCCTGCGGCAGTGGTACACCAGGAAGGCGGGGATaGCGTACTGGATGCCGGTGCCCGCGTAGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: CPCGSGTPGRRG*RTGCRCPRRPL
Trigger: CAGGGGCCTACGCGGGCACCGGCATCCAGTACGTCATCCCCGCCTTCCTGGTGTACCACTGCCGCAGGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS GCA 72 bp CAGGACGAGGCTGACAAGCCACCCGGCAGTGGCGAATaGCTTGGGCATGGTGAGTGCGCCCGTGCCCACGAT +
Preference number: 6 (lower is better)
Translates to: QDEADKPPGSGE*LGHGECARAHD
Trigger: ATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS CCA 72 bp CGGTCCACCACCCACGGGTACGTGCCGCCCTCGCGGTaGAAGAGTGTCTTCCAGTTGTTGCGCAGGGTCACG +
Preference number: 6 (lower is better)
Translates to: RSTTHGYVPPSR*KSVFQLLRRVT
Trigger: CGTGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTACCCGTGGGTGGTGGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 72 bp ACGAGGCTGACAAGCCACCCGGCAGTGGCGAATGCCTaGGGCATGGTGAGTGCGCCCGTGCCCACGATGAGG +
Preference number: 6 (lower is better)
Translates to: TRLTSHPAVANA*GMVSAPVPTMR
Trigger: CCTCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS CCA 72 bp GCTCAGCCCCTAAGGGAGCCGCTTTTAGTGTTGGAGTaGGAGCACGGGCAGCCTGCTACTCCGGAGCTCGCG +
Preference number: 6 (lower is better)
Translates to: AQPLREPLLVLE*EHGQPATPELA
Trigger: CGCGAGCTCCGGAGTAGCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGGGGCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584171.1
CDS GCA 72 bp TGGGAAACACGACGCGGTCCACCACCCACGGGTACGTaGCGCCCTCGCGGTGGAAGAGTGTCTTCCAGTTGT +
Preference number: 6 (lower is better)
Translates to: WETRRGPPPTGT*RPRGGRVSSSC
Trigger: ACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTACCCGTGGGTGGTGGACCGCGTCGTGTTTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CCA 72 bp CCACAGCCAAAGGCCAGCTGGGTGTCCCTGCGGCAGTaGTACACCAGGAAGGCGGGGATGACGTACTGGATG +
Preference number: 6 (lower is better)
Translates to: PQPKASWVSLRQ*YTRKAGMTYWM
Trigger: CATCCAGTACGTCATCCCCGCCTTCCTGGTGTACCACTGCCGCAGGGACACCCAGCTGGCCTTTGGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 72 bp ACCCACGCTCAGCCCCTAAGGGAGCCGCTTTTAGTGTaGGAGTGGGAGCACGGGCAGCCTGCTACTCCGGAG +
Preference number: 6 (lower is better)
Translates to: THAQPLREPLLV*EWEHGQPATPE
Trigger: CTCCGGAGTAGCAGGCTGCCCGTGCTCCCACTCCAACACTAAAAGCGGCTCCCTTAGGGGCTGAGCGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584171.1
CDS CAA 90 bp ACCAGCAGGACGAGGCTGACAAGCCACCCGGCAGTGGCGAATGCCTaGGGCATGGTGAGTGCGCCCGTGCCCACGATGAGGTTAAACATG +
Preference number: 6 (lower is better)
Translates to: TSRTRLTSHPAVANA*GMVSAPVPTMRLNM
Trigger: CATGTTTAACCTCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCGTCCTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS TCA 72 bp AGAAGGTGTGGCGGAAAGGGGACCTGTGCTTGTTGCTaGCCCCACAGCCAAAGGCCAGCTGGGTGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: RRCGGKGTCACC*PHSQRPAGCPC
Trigger: GCAGGGACACCCAGCTGGCCTTTGGCTGTGGGGTCAGCAACAAGCACAGGTCCCCTTTCCGCCACACCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 90 bp CACGGGTACGTGCCGCCCTCGCGGTGGAAGAGTGTCTTCCAGTTGTaGCGCAGGGTCACGGCAATGATGGGGAAGTTGGTGCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: HGYVPPSRWKSVFQL*RRVTAMMGKLVLMV
Trigger: CACCATCAGCACCAACTTCCCCATCATTGCCGTGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTACCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 90 bp ACCCACGGGTACGTGCCGCCCTCGCGGTGGAAGAGTGTCTTCCAGTaGTTGCGCAGGGTCACGGCAATGATGGGGAAGTTGGTGCTGATG +
Preference number: 6 (lower is better)
Translates to: THGYVPPSRWKSVFQ*LRRVTAMMGKLVLM
Trigger: CATCAGCACCAACTTCCCCATCATTGCCGTGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTACCCGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS TCA 72 bp TGGGCCGCTTCTCTGCCCGCTCGTAGTTGTCCCGGATaGGAACATCGCTGTCTGAGGCTGTGGAGGAGTCGT +
Preference number: 6 (lower is better)
Translates to: WAASLPARSCPG*EHRCLRLWRSR
Trigger: ACGACTCCTCCACAGCCTCAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGGGCAGAGAAGCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS TCA 72 bp AGGAGTCATTGCCAGTGGCGCTGCAGGTCACCTGCATaGGGGAGAAGGGCACGGCAGCAGCATAGATGGCGA +
Preference number: 6 (lower is better)
Translates to: RSHCQWRCRSPA*GRRARQQHRWR
Trigger: TCGCCATCTATGCTGCTGCCGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS GCA 72 bp CCACCCGGCAGTGGCGAATGCCTTGGGCATGGTGAGTaGGCCCGTGCCCACGATGAGGTTAAACATGTACAC +
Preference number: 6 (lower is better)
Translates to: PPGSGECLGHGE*ARAHDEVKHVH
Trigger: GTGTACATGTTTAACCTCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS CCA 72 bp AAAGCCCAGAGCAGCACGAAGCCCACCCAGAAGGTGTaGCGGAAAGGGGACCTGTGCTTGTTGCTGACCCCA +
Preference number: 6 (lower is better)
Translates to: KAQSSTKPTQKV*RKGDLCLLLTP
Trigger: TGGGGTCAGCAACAAGCACAGGTCCCCTTTCCGCCACACCTTCTGGGTGGGCTTCGTGCTGCTCTGGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 72 bp ACTCGGCGCAGGGGCCCCCAGCACCGGTCAGTGTCATaGTATTTGGTGTCTGCTTCCACACCGCAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: TRRRGPQHRSVS*YLVSASTPQES
Trigger: TGACTCCTGCGGTGTGGAAGCAGACACCAAATACAATGACACTGACCGGTGCTGGGGGCCCCTGCGCCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CAA 72 bp GTGCCGCCCTCGCGGTGGAAGAGTGTCTTCCAGTTGTaGCGCAGGGTCACGGCAATGATGGGGAAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: VPPSRWKSVFQL*RRVTAMMGKLV
Trigger: CACCAACTTCCCCATCATTGCCGTGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CCA 72 bp GAGGTGGCGCTTGGAGGAGACGGGGGTAATGAGGGATaGCAGAGAGTGCTGGCACATGAAGGAGTAGACGCA +
Preference number: 6 (lower is better)
Translates to: EVALGGDGGNEG*QRVLAHEGVDA
Trigger: TGCGTCTACTCCTTCATGTGCCAGCACTCTCTGCCATCCCTCATTACCCCCGTCTCCTCCAAGCGCCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CCA 72 bp GCGCGTTGGCTGCAGCCATGGCCTCTATCACAAAGGTaGTGGTCACGAAGCATGTTGGCCAGGCTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: ARWLQPWPLSQR*WSRSMLARLVL
Trigger: CAAGACCAGCCTGGCCAACATGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS CAA 72 bp TACGTGCCGCCCTCGCGGTGGAAGAGTGTCTTCCAGTaGTTGCGCAGGGTCACGGCAATGATGGGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: YVPPSRWKSVFQ*LRRVTAMMGKL
Trigger: CAACTTCCCCATCATTGCCGTGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS TCA 72 bp GTCCGTGCCCGATGCGGATCAGGGCCAGCACAATCATaGCGGCGAAAGCGATCCATCTCATCAGAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: VRARCGSGPAQS*RRKRSISSERS
Trigger: TGACCTCTCTGATGAGATGGATCGCTTTCGCCGTCATGATTGTGCTGGCCCTGATCCGCATCGGGCACGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS GCA 72 bp GTTCTCCATCCTCTTCCAGTGGAGCTGCGCGTTGGCTaGAGCCATGGCCTCTATCACAAAGGTGGTGGTCAC +
Preference number: 6 (lower is better)
Translates to: VLHPLPVELRVG*SHGLYHKGGGH
Trigger: GTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS GCA 72 bp CCCCCAGCACCGGTCAGTGTCATTGTATTTGGTGTCTaGTTCCACACCGCAGGAGTCATTGCCAGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: PPAPVSVIVFGV*FHTAGVIASGA
Trigger: AGCGCCACTGGCAATGACTCCTGCGGTGTGGAAGCAGACACCAAATACAATGACACTGACCGGTGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CCA 72 bp TCCTCTTCCAGTGGAGCTGCGCGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGGTGGTCACGAAGCTCA +
Preference number: 6 (lower is better)
Translates to: SSSSGAARWLQP*PLSQRWWSRSS
Trigger: TGAGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335464.10
ENST00000582330.2
ENST00000582773.5
CDS CCA 72 bp TCCTCTTCCAGTGGAGCTGCGCGTTGGCTGCAGCCATaGCCTCTATCACAAAGGTGGTGGTCACGAAGCATG +
Preference number: 6 (lower is better)
Translates to: SSSSGAARWLQP*PLSQRWWSRSM
Trigger: CATGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417024.6
CDS TCA 72 bp CCGCTCGTAGTTGTCCCGGATGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTCATCTTCCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: PLVVVPDENIAV*GCGGVVIFLLL
Trigger: AAGGAGGAGGAAGATGACGACTCCTCCACAGCCTCAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS TCA 72 bp CCGCTCGTAGTTGTCCCGGATGAGAACATCGCTGTCTaGGGCTGTGGAGGAGTCGTCATCTTCCTCCTCGTA +
Preference number: 6 (lower is better)
Translates to: PLVVVPDENIAV*GCGGVVIFLLV
Trigger: TACGAGGAGGAAGATGACGACTCCTCCACAGCCTCAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578764.5
CDS GCA 72 bp TCCTCCTTGAGGTTCTCCATCCTCTTCCAGTGGAGCTaGGCGTTGGCTGCAGCCATGGCCTCTATCACAAAG +
Preference number: 6 (lower is better)
Translates to: SSLRFSILFQWS*ALAAAMASITK
Trigger: CTTTGTGATAGAGGCCATGGCTGCAGCCAACGCGCAGCTCCACTGGAAGAGGATGGAGAACCTCAAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CAA 72 bp TTGTATTTGGTGTCTGCTTCCACACCGCAGGAGTCATaGCCAGTGGCGCTGCAGGTCACCTGCATGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LYLVSASTPQES*PVALQVTCMRE
Trigger: CTCCCTCATGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGTGGAAGCAGACACCAAATACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS CAA 90 bp ACCTGCCTGTCCTGCCATCAGAGCTTGGTCTCGCTGAGGATGATATaGGCCGTGACGAAAATGAAGCAGGAGAAAGCCCAGAGCAGCACG +
Preference number: 6 (lower is better)
Translates to: TCLSCHQSLVSLRMI*AVTKMKQEKAQSST
Trigger: CGTGCTGCTCTGGGCTTTCTCCTGCTTCATTTTCGTCACGGCCAATATCATCCTCAGCGAGACCAAGCTCTGATGGCAGGACAGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 72 bp TGTCCCATTTCCACCCGGTCTGTGATTTCAAACGGGTaGGGAGATCCACGTCTCTGCACAGACAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: CPISTRSVISNG*GDPRLCTDRMG
Trigger: GCCCATCCTGTCTGTGCAGAGACGTGGATCTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAATGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS CAA 90 bp GGCCCATCGATCCATCTCATCAGAGAGGTCAGGATCTGCAGGTACTaGGTCTTCTGGACGTCAAAGAAGGTGAACGGTCCGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: GPSIHLIREVRICRY*VFWTSKKVNGPRRR
Trigger: TCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGATCGATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417024.6
ENST00000582773.5
CDS TCA 72 bp CCCGGTCTCTGTAATTTCACCCGCCATTTCCAAAAGTaGGGAAGGGCTGGCAGCAGAGGTTCCTTAGGTGCA +
Preference number: 6 (lower is better)
Translates to: PGLCNFTRHFQK*GRAGSRGSLGA
Trigger: TGCACCTAAGGAACCTCTGCTGCCAGCCCTTCCTCACTTTTGGAAATGGCGGGTGAAATTACAGAGACCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
ENST00000584246.1
CDS CAA 90 bp GCGAAAGCGATCCATCTCATCAGAGAGGTCAGGATCTGCAGGTACTaGGTCTTCTGGACGTCAAAGAAGGTGAACGGTCCGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: AKAIHLIREVRICRY*VFWTSKKVNGPRRR
Trigger: TCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGATCGCTTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS TCA 72 bp ACATGGAGGCCATTTGTCCCATTTCCACCCGGTCTGTaGTTTCAAACGGGTTGGGAGATCCACGTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: TWRPFVPFPPGL*FQTGWEIHVSA
Trigger: TGCAGAGACGTGGATCTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAATGGGACAAATGGCCTCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS GCA 72 bp GGCCCATCGATCCATCTCATCAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGGACGTCAAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: GPSIHLIREVRI*RYLVFWTSKKV
Trigger: CACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGATCGATGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417024.6
ENST00000582773.5
CDS CCA 72 bp ATCAGAGAGGTCAGGATCTGCAGGTACTTGGTCTTCTaGACGTCAAAGAAGGTGAACGGTCCGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: IREVRICRYLVF*TSKKVNGPRRR
Trigger: TCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CAA 72 bp TCCTGCCATCAGAGCTTGGTCTCGCTGAGGATGATATaGGCCGTGACGAAAATGAAGCAGGAGAAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: SCHQSLVSLRMI*AVTKMKQEKAQ
Trigger: CTGGGCTTTCTCCTGCTTCATTTTCGTCACGGCCAATATCATCCTCAGCGAGACCAAGCTCTGATGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS GCA 72 bp GCGAAAGCGATCCATCTCATCAGAGAGGTCAGGATCTaGAGGTACTTGGTCTTCTGGACGTCAAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: AKAIHLIREVRI*RYLVFWTSKKV
Trigger: CACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGATCGCTTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335464.10
ENST00000582330.2
CDS CAA 72 bp ATCCATCTCATCAGAGAGGTCAGGATCTGCAGGTACTaGGTCTTCTGGACGTCAAAGAAGGTGAACGGTCCG +
Preference number: 6 (lower is better)
Translates to: IHLIREVRICRY*VFWTSKKVNGP
Trigger: CGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGCAGATCCTGACCTCTCTGATGAGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000582330.2
ENST00000582773.5
CDS CAA 72 bp GTTGACCCCCACTTTATTGAAGAACATGGAGGCCATTaGTCCCATTTCCACCCGGTCTGTGATTTCAAACGG +
Preference number: 6 (lower is better)
Translates to: VDPHFIEEHGGH*SHFHPVCDFKR
Trigger: CCGTTTGAAATCACAGACCGGGTGGAAATGGGACAAATGGCCTCCATGTTCTTCAATAAAGTGGGGGTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5
CDS CAA 90 bp ATAGAACAAGTTGACCCCCACTTTATTGAAGAACATGGAGGCCATTaGTCCCATTTCCACCCGGTCTGTGATTTCAAACGGGTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: IEQVDPHFIEEHGGH*SHFHPVCDFKRVGR
Trigger: TCTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAATGGGACAAATGGCCTCCATGTTCTTCAATAAAGTGGGGGTCAACTTGTTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335464.10
ENST00000417024.6
ENST00000578764.5
ENST00000582330.2
ENST00000582773.5