RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMED8 (Homo sapiens)

Ensembl gene IDs: ENSG00000100580

Ensembl transcript IDs: ENST00000216468.8

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCGTCTCCTCCTCCGCCTGGGGGCCCAGCAGCTGGTGCTCTGGTaGCCACTGGCTGCAGCACTACCTGCACTCTGTGGCACTCCTGAG +
Preference number: 1 (lower is better)
Translates to: LRLLLRLGAQQLVLW*PLAAALPALCGTPE
Trigger: CTCAGGAGTGCCACAGAGTGCAGGTAGTGCTGCAGCCAGTGGTCACCAGAGCACCAGCTGCTGGGCCCCCAGGCGGAGGAGGAGACGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp CAGAGAATGGGAATGCTCTGGCAGTCCCCAACATCCTATCCCACTTaGGGCTTTGCTCCGAGGGGAAGAGCAGGTGCAGGATATATTGCC +
Preference number: 1 (lower is better)
Translates to: QRMGMLWQSPTSYPT*GFAPRGRAGAGYIA
Trigger: GGCAATATATCCTGCACCTGCTCTTCCCCTCGGAGCAAAGCCCCAAGTGGGATAGGATGTTGGGGACTGCCAGAGCATTCCCATTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp GGCTTTGCTCCGAGGGGAAGAGCAGGTGCAGGATATATTGCCCTTTaGTGTGATGTAGATGCTACTAGGGACCCACTGGGAAGAGTCCCG +
Preference number: 1 (lower is better)
Translates to: GFAPRGRAGAGYIAL*CDVDATRDPLGRVP
Trigger: CGGGACTCTTCCCAGTGGGTCCCTAGTAGCATCTACATCACATCAAAGGGCAATATATCCTGCACCTGCTCTTCCCCTCGGAGCAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp GTGCCTTCAAGAGGGAATTTGCTGGAGTCTGAAGCAAGAAGGGTATaGGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAG +
Preference number: 1 (lower is better)
Translates to: VPSRGNLLESEARRV*VRDYRTGALHHHLQ
Trigger: CTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp GGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGCTGGAGTCTaGAGCAAGAAGGGTATGAGTCAGGGACTACAGAACAGGGGCACT +
Preference number: 1 (lower is better)
Translates to: GLCPIGAFKREFAGV*SKKGMSQGLQNRGT
Trigger: AGTGCCCCTGTTCTGTAGTCCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp GGGGTGTCTACCATCAGGAATAGTAATAGCCCTCCAAAGGCAGTGTaGTCTCCCAGCTATGCAGAGACCAAGAATAACCAGCAGGCAGGA +
Preference number: 1 (lower is better)
Translates to: GVSTIRNSNSPPKAV*SPSYAETKNNQQAG
Trigger: TCCTGCCTGCTGGTTATTCTTGGTCTCTGCATAGCTGGGAGACCACACTGCCTTTGGAGGGCTATTACTATTCCTGATGGTAGACACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp CCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGCTaGAGTCTGAAGCAAGAAGGGTATGAGTCAGGGACTACAGAACAG +
Preference number: 1 (lower is better)
Translates to: PFRLVPHRCLQEGIC*SLKQEGYESGTTEQ
Trigger: CTGTTCTGTAGTCCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 90 bp CTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTaGTGGAGTCTGAAGCAAGAAGGGTATGAGTCAGGGACTACAGAA +
Preference number: 1 (lower is better)
Translates to: LPFRLVPHRCLQEGI*WSLKQEGYESGTTE
Trigger: TTCTGTAGTCCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp TCAACTTCAATGATGCAAGAGCGGTCACTCAGCTATCCAATGGGATaGCACACAGCAAATCAGCTCTTCACTGCCTCAACAGACAGTCAC +
Preference number: 1 (lower is better)
Translates to: STSMMQERSLSYPMG*HTANQLFTASTDSH
Trigger: GTGACTGTCTGTTGAGGCAGTGAAGAGCTGATTTGCTGTGTGTCATCCCATTGGATAGCTGAGTGACCGCTCTTGCATCATTGAAGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp GAGACAAAGGACTCTGAAATCCTGGAATCACGGGATATCTCTGATTaGTTAGGGAATTCCTCTGCACTCAATCTCCAGCAAATGGGCAGA +
Preference number: 1 (lower is better)
Translates to: ETKDSEILESRDISD*LGNSSALNLQQMGR
Trigger: TCTGCCCATTTGCTGGAGATTGAGTGCAGAGGAATTCCCTAACCAATCAGAGATATCCCGTGATTCCAGGATTTCAGAGTCCTTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 90 bp ATCTCAAAGGAACCTGAAAAACTAGTCCATGATGGGAAGACAGGGTaGCTCATATTATGGTCAGATTACAGGGTGCCTCATATTACCCTC +
Preference number: 1 (lower is better)
Translates to: ISKEPEKLVHDGKTG*LILWSDYRVPHITL
Trigger: GAGGGTAATATGAGGCACCCTGTAATCTGACCATAATATGAGGCACCCTGTCTTCCCATCATGGACTAGTTTTTCAGGTTCCTTTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp GAGAACAGGGTGAGGATCAAAGCAAACGGTTTTCATTTCATTGTTTaGGTCTATAAATTTGGACTGGGAGGGGCTGAGGAAATGACTGTC +
Preference number: 1 (lower is better)
Translates to: ENRVRIKANGFHFIV*VYKFGLGGAEEMTV
Trigger: GACAGTCATTTCCTCAGCCCCTCCCAGTCCAAATTTATAGACCCAAACAATGAAATGAAAACCGTTTGCTTTGATCCTCACCCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp GAAGAGTCCCGTTCCTTGAGTTATGCTACTGTAGGGATAGACCCTTaGTGTGAGGAATCTAACAATGAGTCAAAGGAAACATCACAAAGA +
Preference number: 1 (lower is better)
Translates to: EESRSLSYATVGIDP*CEESNNESKETSQR
Trigger: TCTTTGTGATGTTTCCTTTGACTCATTGTTAGATTCCTCACACCAAGGGTCTATCCCTACAGTAGCATAACTCAAGGAACGGGACTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp CTAAAAAGAAAAATTCATCATCTGTTCTCTCTGAAGCCTGCTACCTaGAGGCTTCATCTACATGACTTAAGCCAAGCCTCCCTTACTTTA +
Preference number: 1 (lower is better)
Translates to: LKRKIHHLFSLKPAT*RLHLHDLSQASLTL
Trigger: TAAAGTAAGGGAGGCTTGGCTTAAGTCATGTAGATGAAGCCTCCAGGTAGCAGGCTTCAGAGAGAACAGATGATGAATTTTTCTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp CAGACTTTAGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTaGGCAGGACTCATAAACATAAACTCATATTCCCTACAGATTAAG +
Preference number: 1 (lower is better)
Translates to: QTLESGFQLILSKRD*AGLININSYSLQIK
Trigger: CTTAATCTGTAGGGAATATGAGTTTATGTTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCTAAAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp ACCCTGAGTGATGAAGAGAGTTCAGGAAGAGAGCCCCTTAAACTCTaGATTAAGGGCTCTTTGGTAATATCATATACTATAATATTTCAA +
Preference number: 1 (lower is better)
Translates to: TLSDEESSGREPLKL*IKGSLVISYTIIFQ
Trigger: TTGAAATATTATAGTATATGATATTACCAAAGAGCCCTTAATTCAGAGTTTAAGGGGCTCTCTTCCTGAACTCTCTTCATCACTCAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 90 bp TTAAATCTTTACGAAGAAAACATGATCATCTTTCAGTCAACTGACTaGTCTGAGTACATGGCACCAAAGAAAGCCCTTCAGAAAATAGAA +
Preference number: 1 (lower is better)
Translates to: LNLYEENMIIFQSTD*SEYMAPKKALQKIE
Trigger: TTCTATTTTCTGAAGGGCTTTCTTTGGTGCCATGTACTCAGATCAGTCAGTTGACTGAAAGATGATCATGTTTTCTTCGTAAAGATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 90 bp ATGGGTTACAGGATTGCTTTCTCTAGACTTGGCTTCTCTTTAACATaGCTAAATGGAAATAATTTAGCTTGGTTAAATGAAAGCTACTTC +
Preference number: 1 (lower is better)
Translates to: MGYRIAFSRLGFSLT*LNGNNLAWLNESYF
Trigger: GAAGTAGCTTTCATTTAACCAAGCTAAATTATTTCCATTTAGCCATGTTAAAGAGAAGCCAAGTCTAGAGAAAGCAATCCTGTAACCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGCAGCTGGTGCTCTGGTaGCCACTGGCTGCAGCACTA +
Preference number: 2 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQQLVLW*PLAAAL
Trigger: TAGTGCTGCAGCCAGTGGTCACCAGAGCACCAGCTG...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGGGGGAAAAAGCTACGTaGGCCAACAGTCAGGCATGC +
Preference number: 2 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQGEKAT*ANSQAC
Trigger: GCATGCCTGACTGTTGGCCCACGTAGCTTTTTCCCC...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCCAGCAAATACAGCCTaGCCCTGTCCCAGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFPANTA*PCPSSP
Trigger: AGGACTGCTGGGACAGGGGCAGGCTGTATTTGCTGG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGCACTACACCACCACCTaGAGAAGCCAAGAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQHYTTT*RSQEGE
Trigger: TTCCCCTTCTTGGCTTCTGCAGGTGGTGGTGTAGTG...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCACCAGCTGGCAGCCTaGTTCAGCCAGCAAATACAG +
Preference number: 2 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFHQLAA*FSQQIQ
Trigger: CTGTATTTGCTGGCTGAAGCAGGCTGCCAGCTGGTG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGACTCTGTGGCACTCCTaGGCCTCAGGGGTGACACAG +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLTLWHS*ASGVTQ
Trigger: CTGTGTCACCCCTGAGGCTCAGGAGTGCCACAGAGT...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGTGCCTCCAGAGTAGCTaGGATTACAGATGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLCLQSS*DYRCPP
Trigger: TGGCGGGCATCTGTAATCCCAGCTACTCTGGAGGCA...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGGGCATCATCCATCTCTaGAGGGCCATACTCCTCGCA +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILGIIHL*RAILLA
Trigger: TGCGAGGAGTATGGCCCTTCAGAGATGGATGATGCC...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGCCAGGACTTCAAAAGTaGCCAGACCCTAAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLPGLQK*PDPKRH
Trigger: GTGCCTCTTAGGGTCTGGTCACTTTTGAAGTCCTGG...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAACTGGTGACCACTGGCTaGAGCACTACCTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKLVTTG*STTCTL
Trigger: CAGAGTGCAGGTAGTGCTGCAGCCAGTGGTCACCAG...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCCACTCTCTCCACTTTaGCTGCCAGTGCCCATAGTA +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWPLSPL*LPVPIV
Trigger: TACTATGGGCACTGGCAGTCAAAGTGGAGAGAGTGG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATATGCTCTGGTGACCACTaGCTGCAGCACTACCTGCAC +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQICSGDH*LQHYLH
Trigger: GTGCAGGTAGTGCTGCAGCCAGTGGTCACCAGAGCA...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGGAAGCAAGAAGGGTATaGGTCAGGGACTACAGAACA +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLEARRV*VRDYRT
Trigger: TGTTCTGTAGTCCCTGACTCATACCCTTCTTGCTTC...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAATGGCACCTCAACAACTaGAGAGAGTGGGTGCCACTA +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKWHLNN*REWVPL
Trigger: TAGTGGCACCCACTCTCTTCAGTTGTTGAGGTGCCA...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGGTGGGTGCCACTAAATaGACTGGCAATAAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILVGATK*TGNKGC
Trigger: ACAGCCCTTATTGCCAGTGCATTTAGTGGCACCCAC...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCACCGTTCCTTGAGTTATaGTACTGTAGGGATAGACCC +
Preference number: 2 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSPFLEL*YCRDRP
Trigger: GGGTCTATCCCTACAGTAGCATAACTCAAGGAACGG...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCTCAGAGAATGGGAATaGTCTGGCAGTCCCCAACAT +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWLREWE*SGSPQH
Trigger: ATGTTGGGGACTGCCAGAGCATTCCCATTCTCTGAG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAGCAGTGGTGACAGGCTaGATAGAGCTTTCTCCAACC +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKAVVTG*IELSPT
Trigger: GGTTGGAGAAAGCTCTATCCAGCCTGTCACCACTGC...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAAAGAGGGGGCTTCAGTaGCTCAGAACAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKKRGLQ*LRTDGK
Trigger: CTTCCCATCTGTTCTGAGCCACTGAAGCCCCCTCTT...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTAACTCCTGGCCTAAGGTaGTCTGCCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLTPGLR*SAHLGL
Trigger: GAGGCCAAGGTGGGCAGACCACCTTAGGCCAGGAGT...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGAAACAGCAGAGATCATaGCCTGAGGGAAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLKQQRS*PEGRGK
Trigger: TTTTCCCCTTCCCTCAGGCCATGATCTCTGCTGTTT...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGAGAGGGCAGCAATCTaGATGATAAACCTGTGCCAA +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWERAAI*MINLCQ
Trigger: TTGGCACAGGTTTATCATTCAGATTGCTGCCCTCTC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGTTCCTTTTAGGCTTGTaGCCCATAGGTGCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWFLLGL*PIGAFK
Trigger: CTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAA...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAACCTTCATGGGCAATGTaGTTTTCCCTCTTCTGGCAC +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKPSWAM*FSLFWH
Trigger: GTGCCAGAAGAGGGAAAAGCACATTGCCCATGAAGG...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCACTGTCACCAGGGAAATaGAAGCTTTGGTCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSLSPGK*KLWSGK
Trigger: TTTACCTGACCAAAGCTTGCATTTCCCTGGTGACAG...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATGGCCTAAGGTGGTCTaGCCACCTTGGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLWPKVV*PPWPPK
Trigger: TTTGGGAGGCCAAGGTGGGCAGACCACCTTAGGCCA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAACCTCCAAAGGCAGTGTaGTCTCCCAGCTATGCAGAG +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKPPKAV*SPSYAE
Trigger: CTCTGCATAGCTGGGAGACCACACTGCCTTTGGAGG...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAATTTCATGGGGAGTGCTaGACTGTACCCCAAACATGG +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKFHGEC*TVPQTW
Trigger: CCATGTTTGGGGTACAGTCCAGCACTCCCCATGAAA...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCACGGGATATCTCTGATTaGTTAGGGAATTCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSRDISD*LGNSSA
Trigger: TGCAGAGGAATTCCCTAACCAATCAGAGATATCCCG...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGAGAATGGGAATGCTCTaGCAGTCCCCAACATCCTAT +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILRMGML*QSPTSY
Trigger: ATAGGATGTTGGGGACTGCCAGAGCATTCCCATTCT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGCAAAGCTGTCTCTTGTaGGGGAAACTGCATTCTGTA +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLQSCLL*GKLHSV
Trigger: TACAGAATGCAGTTTCCCCCACAAGAGACAGCTTTG...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 90 bp GATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATaGATTTATGGCTTTGCCTGGACCTTCTGTCTCCCTCAAATGTAT +
Preference number: 2 (lower is better)
Translates to: DVLPFQAKPVYTLHV*IYGFAWTFCLPQMY
Trigger: ATACATTTGAGGGAGACAGAAGGTCCAGGCAAAGCCATAAATCAATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGAATTTGCTGGAGTCTaGAGCAAGAAGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWEFAGV*SKKGMS
Trigger: ACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGCCTGAGCCTCAGGGGTaGCACAGTAGGAAATGCTGT +
Preference number: 2 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWPEPQG*HSRKCC
Trigger: ACAGCATTTCCTACTGTGTCACCCCTGAGGCTCAGG...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGGAGACAAAGGACTCTaGAATCCTGGAATCACGGGA +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIGDKGL*NPGITG
Trigger: TCCCGTGATTCCAGGATTTCAGAGTCCTTTGTCTCC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTAGCTATCCAATGGGATaGCACACAGCAAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCISYPMG*HTANQL
Trigger: GAGCTGATTTGCTGTGTGTCATCCCATTGGATAGCT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCATTGCTGTGTATGGCCTaGCTGTTTCAATTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSLLCMA*LFQFER
Trigger: TCTCTCAAATTGAAACAGTCAGGCCATACACAGCAA...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGTCAATCTCCAGCAAATaGGCAGATTCCCTCACAACT +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILSISSK*ADSLTT
Trigger: AGTTGTGAGGGAATCTGCCCATTTGCTGGAGATTGA...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGAGGACTCTGAAATCCTaGAATCACGGGATATCTCTG +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILRTLKS*NHGISL
Trigger: CAGAGATATCCCGTGATTCCAGGATTTCAGAGTCCT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGAAGCCGTCACAGGACTaGCCTACAGAAATAAAACAT +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILKPSQD*PTEIKH
Trigger: ATGTTTTATTTCTGTAGGTCAGTCCTGTGACGGCTT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTACATCACAAAGAAGGTaGCACCTCAGAGGAGACAAA +
Preference number: 2 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCITSQRR*HLRGDK
Trigger: TTTGTCTCCTCTGAGGTGTCACCTTCTTTGTGATGT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCTTTTCTGGAGAGTCTaGCACCTTTTAAGGCCTAAA +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWLFWRV*HLLRPK
Trigger: TTTAGGCCTTAAAAGGTGTCAGACTCTCCAGAAAAG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGTTAATATCAGAGTCCTaGGGACATGTCATCAAGCAA +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLLISES*GHVIKQ
Trigger: TTGCTTGATGACATGTCCTCAGGACTCTGATATTAA...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGGTTACTATTTGTTTGTaGTCTAGAGAACAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLVTICL*SREQGE
Trigger: CTCACCCTGTTCTCTAGAGCACAAACAAATAGTAAC...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGAAACATGGAGTAAGGTaGCATCATCCATCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILKHGVR*HHPSLK
Trigger: CTTCAGAGATGGATGATGCCACCTTACTCCATGTTT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAACACTCAGCTATCCAATaGGATGACACACAGCAAATC +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKHSAIQ*DDTQQI
Trigger: GATTTGCTGTGTGTCATCCCATTGGATAGCTGAGTG...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAACATGTATTGATTTATaGCTTTGCCTGGACCTTCTG +
Preference number: 2 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSTCIDL*LCLDLL
Trigger: CAGAAGGTCCAGGCAAAGCCATAAATCAATACATGT...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGGATCTTAGGTTACATTaGTCATCACTTGAGATTGCA +
Preference number: 2 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLDLRLH*SSLEIA
Trigger: TGCAATCTCAAGTGATGATCAATGTAACCTAAGATC...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAATCACGGGATATCTCTaGTTGGTTAGGGAATTCCTC +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIITGYL*LVREFL
Trigger: GAGGAATTCCCTAACCAATCAGAGATATCCCGTGAT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGGATATATTGCCCTTTaGTGTGATGTAGATGCTACT +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWGYIAL*CDVDAT
Trigger: AGTAGCATCTACATCACATCAAAGGGCAATATATCC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAATCCCTTAGGCTTCCCTaGTGCAACAGAACTAGGATT +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKSLRLP*CNRTRI
Trigger: AATCCTAGTTCTGTTGCATCAGGGAAGCCTAAGGGA...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTACTTGTGCCCCATAGGTaGCTTCAAGAGGGAATTTGC +
Preference number: 2 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLLVPHR*LQEGIC
Trigger: GCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAG...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAGTTAGGGAATTCCTCTaGACTCAATCTCCAGCAAAT +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKVREFL*TQSPAN
Trigger: ATTTGCTGGAGATTGAGTGCAGAGGAATTCCCTAAC...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGATGGGAAGACAGGGTaGCTCATATTATGGTCAGAT +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIDGKTG*LILWSD
Trigger: ATCTGACCATAATATGAGGCACCCTGTCTTCCCATC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAGGGTGCCTCATATTATaGTCAGATTACAGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKGCLIL*SDYRVP
Trigger: AGGCACCCTGTAATCTGACCATAATATGAGGCACCC...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAGAAACTTTGGAAACCTaGTTGGGTTTCACTGCATTT +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKETLET*LGFTAF
Trigger: AAATGCAGTGAAACCCAATCAGGTTTCCAAAGTTTC...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAAGATGGGAAGCCTTCTaGGAAACAGATGGAAACTGT +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKRWEAF*ETDGNC
Trigger: ACAGTTTCCATCTGTTTCTCAGAAGGCTTCCCATCT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTAACCCTGACAGTTGGTaGAAAACCAGTATGAATGAA +
Preference number: 2 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCINPDSW*KTSMNE
Trigger: TTCATTCATACTGGTTTTTCACCAACTGTCAGGGTT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATCTTTGATCTACCTCTaGCCTGGAAACCCCCATCTT +
Preference number: 2 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLSLIYL*PGNPHL
Trigger: AAGATGGGGGTTTCCAGGTCAGAGGTAGATCAAAGA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAATATGCCCCTCCCTTATaGTCCACTAAAACAAGTCTC +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKYAPPL*STKTSL
Trigger: GAGACTTGTTTTAGTGGAGCATAAGGGAGGGGCATA...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGCTTCTGAGAAACAGATaGAAACTGTTTCAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: LLGCGFSVITCASVSSILLLRNR*KLFQRQ
Trigger: TTGCCTTTGAAACAGTTTCCATCTGTTTCTCAGAAG...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAAACAAGTGTTATCCTTaGGAGCTTGCTGTGTATGGC +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKNKCYP*ELAVYG
Trigger: GCCATACACAGCAAGCTCCCAAGGATAACACTTGTT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGATGGGCTCTGAACCTTaGCAAAATAAACCTCTAAAT +
Preference number: 2 (lower is better)
Translates to: LDCVCEACLFVNELHYHWMGSEP*QNKPLN
Trigger: ATTTAGAGGTTTATTTTGCCAAGGTTCAGAGCCCAT...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCATTACCCTCTTCCCTTTaGAATTTAAATACAACTGAC +
Preference number: 2 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSLPSSL*NLNTTD
Trigger: GTCAGTTGTATTTAAATTCCAAAGGGAAGAGGGTAA...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAAAAAACCAGTATGAATaGAATGTAACCATGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIKNQYE*NVTMPR
Trigger: CCTGGGCATGGTTACATTTCATTCATACTGGTTTTT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAATTACACATTCAACCCTaGGTGATGAAGAGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKLHIQP*VMKRVQ
Trigger: CTGAACTCTCTTCATCACTCAGGGTTGAATGTGTAA...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR GCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAACTCTTGTACTGACATaGCAGTTAGTAAGGAAAACA +
Preference number: 2 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKTLVLT*QLVRKT
Trigger: TGTTTTCCTTACTAACTGGCATGTCAGTACAAGAGT...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTAATGATTCAACTTCAATaGTGCAAGAGCGGTCACTCA +
Preference number: 2 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLMIQLQ*CKSGHS
Trigger: TGAGTGACCGCTCTTGCATCATTGAAGTTGAATCAT...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAATACCTTACATGTATTaGTTTATGGCTTTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIIPYMY*FMALPG
Trigger: TCCAGGCAAAGCCATAAATCAATACATGTAAGGTAT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGTAACCCATGTTGAATaGAACAGGTCTGCTAAAAAT +
Preference number: 2 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIVTHVE*NRSAKN
Trigger: ATTTTTAGCAGACCTGTTTCATTCAACATGGGTTAC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 90 bp GGCAGTTTTTCTTCCCACAAGATCTTAGGTTACATTGATCATCACTaGAGATTGCATGAATGTTCTTGCTGTAATGGCAAAAACATAGAC +
Preference number: 2 (lower is better)
Translates to: GSFSSHKILGYIDHH*RLHECSCCNGKNID
Trigger: GTCTATGTTTTTGCCATTACAGCAAGAACATTCATGCAATCTCAAGTGATGATCAATGTAACCTAAGATCTTGTGGGAAGAAAAACTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR TCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGGGTGAAAAACCAGTATaGATGAAATGTAACCATGCC +
Preference number: 2 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWGEKPV*MKCNHA
Trigger: GGCATGGTTACATTTCATTCATACTGGTTTTTCACC...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 90 bp TTTTCTTCCCACAAGATCTTAGGTTACATTGATCATCACTTGAGATaGCATGAATGTTCTTGCTGTAATGGCAAAAACATAGACTTAGGA +
Preference number: 2 (lower is better)
Translates to: FSSHKILGYIDHHLR*HECSCCNGKNIDLG
Trigger: TCCTAAGTCTATGTTTTTGCCATTACAGCAAGAACATTCATGCAATCTCAAGTGATGATCAATGTAACCTAAGATCTTGTGGGAAGAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp GGAATGCTCTGGCAGTCCCCAACATCCTATCCCACTTaGGGCTTTGCTCCGAGGGGAAGAGCAGGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: GMLWQSPTSYPT*GFAPRGRAGAG
Trigger: TCCTGCACCTGCTCTTCCCCTCGGAGCAAAGCCCCAAGTGGGATAGGATGTTGGGGACTGCCAGAGCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp TTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTaGTTCAGCCAGCAAATACAGCCTGCCCCTGTCCCA +
Preference number: 3 (lower is better)
Translates to: LPIPNKRHQLAA*FSQQIQPAPVP
Trigger: TGGGACAGGGGCAGGCTGTATTTGCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTaGCAGCCTGCTTCAGCCAGCAAATACAGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: FGSCLSQTRGTS*QPASASKYSLP
Trigger: GGGCAGGCTGTATTTGCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp GGGAGTGCTGGACTGTACCCCAAACATGGAGTAAGGTaGCATCATCCATCTCTGAAGGGCCATACTCCTCGC +
Preference number: 3 (lower is better)
Translates to: GSAGLYPKHGVR*HHPSLKGHTPR
Trigger: GCGAGGAGTATGGCCCTTCAGAGATGGATGATGCCACCTTACTCCATGTTTGGGGTACAGTCCAGCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGTCCACTCTCTCCACTTaGACTGCCAGTGCCCATAGT +
Preference number: 3 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQSTLST*TASAHS
Trigger: ACTATGGGCACTGGCAGTCAAAGTGGAGAGAGTGGA...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp ACCCGACTACCTCGGGCACATGTTCTAAGAACCTCCTaGGGCCCCATCATGGGCTCTGAACCTTGGCAAAAT +
Preference number: 3 (lower is better)
Translates to: TRLPRAHVLRTS*GPIMGSEPWQN
Trigger: ATTTTGCCAAGGTTCAGAGCCCATGATGGGGCCTCAGGAGGTTCTTAGAACATGTGCCCGAGGTAGTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp CCGAGGGGAAGAGCAGGTGCAGGATATATTGCCCTTTaGTGTGATGTAGATGCTACTAGGGACCCACTGGGA +
Preference number: 3 (lower is better)
Translates to: PRGRAGAGYIAL*CDVDATRDPLG
Trigger: TCCCAGTGGGTCCCTAGTAGCATCTACATCACATCAAAGGGCAATATATCCTGCACCTGCTCTTCCCCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp AGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTaGTGGAGTCTGAAGCAAGAAGGGTATGAGTCAGGG +
Preference number: 3 (lower is better)
Translates to: RLVPHRCLQEGI*WSLKQEGYESG
Trigger: CCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGATGAACCTTTGGCTCTaGCCTATCCCAAACAAGAGG +
Preference number: 3 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQMNLWL*PIPNKR
Trigger: CCTCTTGTTTGGGATAGGCAAGAGCCAAAGGTTCAT...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp AGAGGGAATTTGCTGGAGTCTGAAGCAAGAAGGGTATaGGTCAGGGACTACAGAACAGGGGCACTACACCAC +
Preference number: 3 (lower is better)
Translates to: RGNLLESEARRV*VRDYRTGALHH
Trigger: GTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp ATCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTaGCTTCAAGAGGGAATTTGCTGGAGTCTGAAGCAA +
Preference number: 3 (lower is better)
Translates to: IALLPFRLVPHR*LQEGICWSLKQ
Trigger: TTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp CTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGCTaGAGTCTGAAGCAAGAAGGGTATGAGTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: LVPHRCLQEGIC*SLKQEGYESGT
Trigger: AGTCCCTGACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp AACCAACTGCCAGTCAGGAACTCTTTGATCTACCTCTaGCCTGGAAACCCCCATCTTCAAGATGTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: NQLPVRNSLIYL*PGNPHLQDVLP
Trigger: AGGCAGGACATCTTGAAGATGGGGGTTTCCAGGTCAGAGGTAGATCAAAGAGTTCCTGACTGGCAGTTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp AATAATGGAGGTATGATGCTGCTCAGAGAATGGGAATaGTCTGGCAGTCCCCAACATCCTATCCCACTTGGG +
Preference number: 3 (lower is better)
Translates to: NNGGMMLLREWE*SGSPQHPIPLG
Trigger: CCCAAGTGGGATAGGATGTTGGGGACTGCCAGAGCATTCCCATTCTCTGAGCAGCATCATACCTCCATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp GTGACAGGCTGGATAGAGCTTTCTCCAACCAAAAGATaGGGCTCCTTCATGGGCAATGTGCTTTTCCCTCTT +
Preference number: 3 (lower is better)
Translates to: VTGWIELSPTKR*GSFMGNVLFPL
Trigger: AAGAGGGAAAAGCACATTGCCCATGAAGGAGCCCCATCTTTTGGTTGGAGAAAGCTCTATCCAGCCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp ACTGCCAGTCAGGAACTCTTTGATCTACCTCTGACCTaGAAACCCCCATCTTCAAGATGTCCTGCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: TASQELFDLPLT*KPPSSRCPAFP
Trigger: TGGAAAGGCAGGACATCTTGAAGATGGGGGTTTCCAGGTCAGAGGTAGATCAAAGAGTTCCTGACTGGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCATGCTTCCTTTTAGGCTaGTGCCCCATAGGTGCCTTC +
Preference number: 3 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSCFLLG*CPIGAF
Trigger: GAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCA...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp ATGATGCAAGAGCGGTCACTCAGCTATCCAATGGGATaGCACACAGCAAATCAGCTCTTCACTGCCTCAACA +
Preference number: 3 (lower is better)
Translates to: MMQERSLSYPMG*HTANQLFTAST
Trigger: TGTTGAGGCAGTGAAGAGCTGATTTGCTGTGTGTCATCCCATTGGATAGCTGAGTGACCGCTCTTGCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp ACCATCAGGAATAGTAATAGCCCTCCAAAGGCAGTGTaGTCTCCCAGCTATGCAGAGACCAAGAATAACCAG +
Preference number: 3 (lower is better)
Translates to: TIRNSNSPPKAV*SPSYAETKNNQ
Trigger: CTGGTTATTCTTGGTCTCTGCATAGCTGGGAGACCACACTGCCTTTGGAGGGCTATTACTATTCCTGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAATCCCACTTGGGGCTTaGCTCCGAGGGGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKIPLGA*LRGEEQ
Trigger: CTGCTCTTCCCCTCGGAGCAAAGCCCCAAGTGGGAT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp CACAGAGGTGAGGGGAACAAGTCCCTTAGGCTTCCCTaGTGCAACAGAACTAGGATTCCAAAGAAAATAAGC +
Preference number: 3 (lower is better)
Translates to: HRGEGNKSLRLP*CNRTRIPKKIS
Trigger: GCTTATTTTCTTTGGAATCCTAGTTCTGTTGCATCAGGGAAGCCTAAGGGACTTGTTCCCCTCACCTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp CTCTCTGAAGCCTGCTACCTGGAGGCTTCATCTACATaGCTTAAGCCAAGCCTCCCTTACTTTAACTTAAGC +
Preference number: 3 (lower is better)
Translates to: LSEACYLEASST*LKPSLPYFNLS
Trigger: GCTTAAGTTAAAGTAAGGGAGGCTTGGCTTAAGTCATGTAGATGAAGCCTCCAGGTAGCAGGCTTCAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp TTCCGGAGCAGCTTCACAATCACTCTTGTACTGACATaGCAGTTAGTAAGGAAAACAGCAGAGATCATGGCC +
Preference number: 3 (lower is better)
Translates to: FRSSFTITLVLT*QLVRKTAEIMA
Trigger: GGCCATGATCTCTGCTGTTTTCCTTACTAACTGGCATGTCAGTACAAGAGTGATTGTGAAGCTGCTCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAATTTGGGTCTATAAATTaGGACTGGGAGGGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKFGSIN*DWEGLR
Trigger: CCTCAGCCCCTCCCAGTCCAAATTTATAGACCCAAA...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCTACAAAGCTGTCTCTaGTGGGGGAAACTGCATTCT +
Preference number: 3 (lower is better)
Translates to: LDCVCEACLFVNELHYHWLQSCL*WGKLHS
Trigger: AGAATGCAGTTTCCCCCACAAGAGACAGCTTTGTAG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp TTTATGAAGACCACCTCCTGGGTAACCCATGTTGAATaGAACAGGTCTGCTAAAAATCAGGGGCTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: FMKTTSWVTHVE*NRSAKNQGLSN
Trigger: GTTGGAGAGCCCCTGATTTTTAGCAGACCTGTTTCATTCAACATGGGTTACCCAGGAGGTGGTCTTCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp GCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATaGCTATTTGTAAATGAGCTCCACTATCATTGGTTT +
Preference number: 3 (lower is better)
Translates to: ASVLPLDCVCEA*LFVNELHYHWF
Trigger: AAACCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp AAAATTCATCATCTGTTCTCTCTGAAGCCTGCTACCTaGAGGCTTCATCTACATGACTTAAGCCAAGCCTCC +
Preference number: 3 (lower is better)
Translates to: KIHHLFSLKPAT*RLHLHDLSQAS
Trigger: GGAGGCTTGGCTTAAGTCATGTAGATGAAGCCTCCAGGTAGCAGGCTTCAGAGAGAACAGATGATGAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp CGTTCCTTGAGTTATGCTACTGTAGGGATAGACCCTTaGTGTGAGGAATCTAACAATGAGTCAAAGGAAACA +
Preference number: 3 (lower is better)
Translates to: RSLSYATVGIDP*CEESNNESKET
Trigger: TGTTTCCTTTGACTCATTGTTAGATTCCTCACACCAAGGGTCTATCCCTACAGTAGCATAACTCAAGGAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp GGCCAAACCAGTGTATACCTTACATGTATTGATTTATaGCTTTGCCTGGACCTTCTGTCTCCCTCAAATGTA +
Preference number: 3 (lower is better)
Translates to: GQTSVYLTCIDL*LCLDLLSPSNV
Trigger: TACATTTGAGGGAGACAGAAGGTCCAGGCAAAGCCATAAATCAATACATGTAAGGTATACACTGGTTTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGGATCATCACTTGAGATaGCATGAATGTTCTTGCTGT +
Preference number: 3 (lower is better)
Translates to: LLGCGFSVITCASVSSILDHHLR*HECSCC
Trigger: ACAGCAAGAACATTCATGCAATCTCAAGTGATGATC...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGTGGGTTTCACTGCATTaGATTCCAAAGCAACATTTC +
Preference number: 3 (lower is better)
Translates to: LDCVCEACLFVNELHYHWWVSLH*IPKQHF
Trigger: GAAATGTTGCTTTGGAATCAAATGCAGTGAAACCCA...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGTCTCTAATTGGACACTaGTCAAAAGGAACAGAATGT +
Preference number: 3 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLSLIGH*SKGTEC
Trigger: ACATTCTGTTCCTTTTGACAAGTGTCCAATTAGAGA...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp ACAAGTGTTATCCTTGGGAGCTTGCTGTGTATGGCCTaGCTGTTTCAATTTGAGAGAAAGGCAGAAGTTAAT +
Preference number: 3 (lower is better)
Translates to: TSVILGSLLCMA*LFQFERKAEVN
Trigger: ATTAACTTCTGCCTTTCTCTCAAATTGAAACAGTCAGGCCATACACAGCAAGCTCCCAAGGATAACACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp TACGAAGAAAACATGATCATCTTTCAGTCAACTGACTaGTCTGAGTACATGGCACCAAAGAAAGCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: YEENMIIFQSTD*SEYMAPKKALQ
Trigger: CTGAAGGGCTTTCTTTGGTGCCATGTACTCAGATCAGTCAGTTGACTGAAAGATGATCATGTTTTCTTCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp CCAAAAGCTTTAAGCCCTCAATGCAAGAAAGCTAAATaGAGAAACTTTGGAAACCTGATTGGGTTTCACTGC +
Preference number: 3 (lower is better)
Translates to: PKALSPQCKKAK*RNFGNLIGFHC
Trigger: GCAGTGAAACCCAATCAGGTTTCCAAAGTTTCTGCATTTAGCTTTCTTGCATTGAGGGCTTAAAGCTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR GCA 72 bp AGACAGGGTGCCTCATATTATGGTCAGATTACAGGGTaGCTCATATTACCCTCTTCCCTTTGGAATTTAAAT +
Preference number: 3 (lower is better)
Translates to: RQGASYYGQITG*LILPSSLWNLN
Trigger: ATTTAAATTCCAAAGGGAAGAGGGTAATATGAGGCACCCTGTAATCTGACCATAATATGAGGCACCCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR-3UTR CAA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGACTCTGGAGTGTTTTTaGTTTTTCATCTTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: LDCVCEACLFVNELHYHWTLECF*FFIFSV
Trigger: GACAGAGAAGATGAAAAACAAAAAACACTCCAGAGT...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp AACACAGAAACCCTGACAGTTGGTGAAAAACCAGTATaGATGAAATGTAACCATGCCCAGGACTTCAAAAGT +
Preference number: 3 (lower is better)
Translates to: NTETLTVGEKPV*MKCNHAQDFKS
Trigger: ACTTTTGAAGTCCTGGGCATGGTTACATTTCATTCATACTGGTTTTTCACCAACTGTCAGGGTTTCTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp GAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTaGGCAGGACTCATAAACATAAACTCATATTCCCTA +
Preference number: 3 (lower is better)
Translates to: ESGFQLILSKRD*AGLININSYSL
Trigger: TAGGGAATATGAGTTTATGTTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp GAATTTCAAAACACTTCCCGTTACGTTAAGGGAAAATaGGTACACCAGATTCATGGGTTACAGGATTGCTTT +
Preference number: 3 (lower is better)
Translates to: EFQNTSRYVKGK*VHQIHGLQDCF
Trigger: AAAGCAATCCTGTAACCCATGAATCTGGTGTACCCATTTTCCCTTAACGTAACGGGAAGTGTTTTGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp AATGCAAGAAAGCTAAATGCAGAAACTTTGGAAACCTaGTTGGGTTTCACTGCATTTGATTCCAAAGCAACA +
Preference number: 3 (lower is better)
Translates to: NARKLNAETLET*LGFTAFDSKAT
Trigger: TGTTGCTTTGGAATCAAATGCAGTGAAACCCAATCAGGTTTCCAAAGTTTCTGCATTTAGCTTTCTTGCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CCA 72 bp GTGTATACCTTACATGTATTGATTTATGGCTTTGCCTaGACCTTCTGTCTCCCTCAAATGTATAAAACTGTA +
Preference number: 3 (lower is better)
Translates to: VYTLHVLIYGFA*TFCLPQMYKTV
Trigger: TACAGTTTTATACATTTGAGGGAGACAGAAGGTCCAGGCAAAGCCATAAATCAATACATGTAAGGTATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR TCA 72 bp TTATTTTACAAAGATTATATTCAGTTAGCTAAGGCATaGTTCAACTTCAATGATGCAAGAGCGGTCACTCAG +
Preference number: 3 (lower is better)
Translates to: LFYKDYIQLAKA*FNFNDARAVTQ
Trigger: CTGAGTGACCGCTCTTGCATCATTGAAGTTGAATCATGCCTTAGCTAACTGAATATAATCTTTGTAAAATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGTCTGAGGCGGCCGCCTaGCTCCCCTCCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQSEAAA*LPSTPW
Trigger: CCAGGGAGTGGAGGGGAGCCAGGCGGCCGCCTCAGA...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCGCCGGTACACAGGCATaGCCTCCCCATAGCGACCCC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAAGTQA*PPHSDP
Trigger: GGGGTCGCTATGGGGAGGTCATGCCTGTGTACCGGC...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCACAAGAGGCACCAGCTaGCAGCCTGCTTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASATRGTS*QPASAS
Trigger: GCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGT...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAACGCTTCCCCTCTGGATaGGTAGGTACCCGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQERFPSG*VGTRMV
Trigger: GACCATCCGGGTACCTACTCATCCAGAGGGGAAGCG...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGGCCCCTCAGCCGCCTaGAGGTCAGACATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFGPSAA*RSDICS
Trigger: GCTGCAGATGTCTGACCTGCAGGCGGCTGAGGGGCC...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCCCTGAGCCTCAGGGGTaGCACAGTAGGAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAPEPQG*HSRKCC
Trigger: ACAGCATTTCCTACTGTGTCACCCCTGAGGCTCAGG...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCAGGAGCCATCAGAGGTaGGGAGACTTTCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASARSHQR*GDFPVV
Trigger: GACCACAGGAAAGTCTCCCCACCTCTGATGGCTCCT...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCAGCTGGTGCTCTGGTaGCCACTGGCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFQLVLW*PLAAAL
Trigger: TAGTGCTGCAGCCAGTGGTCACCAGAGCACCAGCTG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCAAGAGGGGGCTTCAGTaGCTCAGAACAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAKRGLQ*LRTDGK
Trigger: CTTCCCATCTGTTCTGAGCCACTGAAGCCCCCTCTT...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCCGTCACTGGAATCACTaGCCTGCACAGTTATGTCAG +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASARHWNH*PAQLCQ
Trigger: CTGACATAACTGTGCAGGTCAGTGATTCCAGTGACG...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAAAGGAGTTGTCGAACTTaGGCAGGTAGATGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQERSCRT*AGRCPH
Trigger: GTGAGGGCATCTACCTGCTCAAGTTCGACAACTCCT...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAACCAGGACTTCAAAAGTaGCCAGACCCTAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQEPGLQK*PDPKRH
Trigger: GTGCCTCTTAGGGTCTGGTCACTTTTGAAGTCCTGG...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGTCCGCAGATCTTCCGTaGCATCCTTACTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQSADLP*HPYSLE
Trigger: CTCCAGTGAGTAAGGATGCCACGGAAGATCTGCGGA...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCTTTCATGGGGAGTGCTaGACTGTACCCCAAACATGG +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAFHGEC*TVPQTW
Trigger: CCATGTTTGGGGTACAGTCCAGCACTCCCCATGAAA...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCAGTCTGGAGTGCAGTaGCATGATCTCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFQSGVQ*HDLGSL
Trigger: CAGCGAGCCGAGATCATGCCACTGCACTCCAGACTG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGGCATCATCCATCTCTaGAGGGCCATACTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFGIIHL*RAILLA
Trigger: TGCGAGGAGTATGGCCCTTCAGAGATGGATGATGCC...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGACCTGGGCCTGGTCTaGAGGCAGCAAATCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFDLGLV*RQQILF
Trigger: AAACAGGATTTGCTGCCTGCAGACCAGGCCCAGGTC...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCTTATCCTTGGGAGCTTaGTGTGTATGGCCTGACTGT +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASALSLGA*CVWPDC
Trigger: ACAGTCAGGCCATACACAGCAAGCTCCCAAGGATAA...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAAAATTCTCCCTGCTTCTaGCTCCAGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQENSPCF*LQSSWD
Trigger: ATCCCAGCTACTCTGGAGGCAGAAGCAGGGAGAATT...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCGTCCCCAGACCTCTGTaGAACTTGATACTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAVPRPL*NLILSH
Trigger: ATGGCTAAGTATCAAGTTCCACAGAGGTCTGGGGAC...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGCCTGCACGTCTCGGTaGCTGTCCCGCCGGTACACA +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWACTSR*LSRRYT
Trigger: TGTGTACCGGCGGGACAGCCACCGAGACGTGCAGGC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTTGCCTCCAGAGTAGCTaGGATTACAGATGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFCLQSS*DYRCPP
Trigger: TGGCGGGCATCTGTAATCCCAGCTACTCTGGAGGCA...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCCACTCTCTCCACTTTaGCTGCCAGTGCCCATAGTA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFPLSPL*LPVPIV
Trigger: TACTATGGGCACTGGCAGTCAAAGTGGAGAGAGTGG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCATCACGGGATATCTCTaGTTGGTTAGGGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAITGYL*LVREFL
Trigger: GAGGAATTCCCTAACCAATCAGAGATATCCCGTGAT...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCACATCACAAAGAAGGTaGCACCTCAGAGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASATSQRR*HLRGDK
Trigger: TTTGTCTCCTCTGAGGTGTCACCTTCTTTGTGATGT...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCCGGGATATCTCTGATTaGTTAGGGAATTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASARDISD*LGNSSA
Trigger: TGCAGAGGAATTCCCTAACCAATCAGAGATATCCCG...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCAACAAGTGTTATCCTTaGGAGCTTGCTGTGTATGGC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASANKCYP*ELAVYG
Trigger: GCCATACACAGCAAGCTCCCAAGGATAACACTTGTT...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAACTCCTGGCCTAAGGTaGTCTGCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSTPGLR*SAHLGL
Trigger: GAGGCCAAGGTGGGCAGACCACCTTAGGCCAGGAGT...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGGAATTTGCTGGAGTCTaGAGCAAGAAGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQEFAGV*SKKGMS
Trigger: ACTCATACCCTTCTTGCTTCAGACTCCAGCAAATTC...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGAGATGGGAAGCCTTCTaGGAAACAGATGGAAACTGT +
Preference number: 4 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQRWEAF*ETDGNC
Trigger: ACAGTTTCCATCTGTTTCTCAGAAGGCTTCCCATCT...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGCAGGGTAGTCATGGCTaGCAGCCTGCACGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILQGSHG*QPARLG
Trigger: ACCGAGACGTGCAGGCTGGCAGCCATGACTACCCTG...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCTTGTGCCCCATAGGTaGCTTCAAGAGGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFLVPHR*LQEGIC
Trigger: GCAAATTCCCTCTTGAAGGCACCTATGGGGCACAAG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCTCAGAGAATGGGAATaGTCTGGCAGTCCCCAACAT +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFLREWE*SGSPQH
Trigger: ATGTTGGGGACTGCCAGAGCATTCCCATTCTCTGAG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCATGGCCTAAGGTGGTCTaGCCACCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSWPKVV*PPWPPK
Trigger: TTTGGGAGGCCAAGGTGGGCAGACCACCTTAGGCCA...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp ATGCTACTAGGGACCCACTGGGAAGAGTCCCGTTCCTaGAGTTATGCTACTGTAGGGATAGACCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: MLLGTHWEESRS*SYATVGIDPWC
Trigger: ACACCAAGGGTCTATCCCTACAGTAGCATAACTCAAGGAACGGGACTCTTCCCAGTGGGTCCCTAGTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGAAGCAAGAAGGGTATaGGTCAGGGACTACAGAACA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFEARRV*VRDYRT
Trigger: TGTTCTGTAGTCCCTGACTCATACCCTTCTTGCTTC...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTGAGAGGGCAGCAATCTaGATGATAAACCTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFERAAI*MINLCQ
Trigger: TTGGCACAGGTTTATCATTCAGATTGCTGCCCTCTC...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGAAACACAGAGACTGCTaGGGTCCCATCTCACCTCCG +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLKHRDC*GPISPP
Trigger: CGGAGGTGAGATGGGACCTCAGCAGTCTCTGTGTTT...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGAAAATAATGGAGGTATaGTGCTGCTCAGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQKIMEV*CCSENG
Trigger: CCCATTCTCTGAGCAGCATCATACCTCCATTATTTT...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCGGTGAAAAACCAGTATaGATGAAATGTAACCATGCC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAGEKPV*MKCNHA
Trigger: GGCATGGTTACATTTCATTCATACTGGTTTTTCACC...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGGTTCTAAGAACCTCCTaGGGCCCCATCATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLVLRTS*GPIMGS
Trigger: AGAGCCCATGATGGGGCCTCAGGAGGTTCTTAGAAC...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTTGGAGTGCAGTGGCATaGTCTCGGCTCGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIWSAVA*SRLAAT
Trigger: GGTTGCAGCGAGCCGAGATCATGCCACTGCACTCCA...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATATCATGGCTGCCAGCCTaGACGTCTCGGTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQISWLPA*TSRWLS
Trigger: GGACAGCCACCGAGACGTGCAGGCTGGCAGCCATGA...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCTGGTGACCACTGGCTaGAGCACTACCTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWLVTTG*STTCTL
Trigger: CAGAGTGCAGGTAGTGCTGCAGCCAGTGGTCACCAG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTTCCCACTTGGGGCTTTaGTCCGAGGGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCISHLGL*SEGKSR
Trigger: CCTGCTCTTCCCCTCGGAGCAAAGCCCCAAGTGGGA...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCGTTACTATTTGTTTGTaGTCTAGAGAACAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAVTICL*SREQGE
Trigger: CTCACCCTGTTCTCTAGAGCACAAACAAATAGTAAC...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGACCATCTGTGGCCTGTaGGGTGAGGAGCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWTICGL*GEEQGS
Trigger: AGAACCCTGCTCCTCACCCCACAGGCCACAGATGGT...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAGGGGAGACTTTCCTGTaGTCCCCCAGAAGATCTGCA +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSGETFL*SPRRSA
Trigger: TGCAGATCTTCTGGGGGACCACAGGAAAGTCTCCCC...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCAAGAGGGAATTTGCTaGAGTCTGAAGCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFQEGIC*SLKQEG
Trigger: CCCTTCTTGCTTCAGACTCCAGCAAATTCCCTCTTG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGTGCTCTGGTGACCACTaGCTGCAGCACTACCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILCSGDH*LQHYLH
Trigger: GTGCAGGTAGTGCTGCAGCCAGTGGTCACCAGAGCA...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAACATCCTATCCCACTTaGGGCTTTGCTCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSTSYPT*GFAPRG
Trigger: TCCCCTCGGAGCAAAGCCCCAAGTGGGATAGGATGT...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGGGATATATTGCCCTTTaGTGTGATGTAGATGCTACT +
Preference number: 4 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQGYIAL*CDVDAT
Trigger: AGTAGCATCTACATCACATCAAAGGGCAATATATCC...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTTTTCAGTCAACTGACTaGTCTGAGTACATGGCACCA +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFFQSTD*SEYMAP
Trigger: TGGTGCCATGTACTCAGATCAGTCAGTTGACTGAAA...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGCACTACACCACCACCTaGAGAAGCCAAGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLHYTTT*RSQEGE
Trigger: TTCCCCTTCTTGGCTTCTGCAGGTGGTGGTGTAGTG...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGGGGGAAAAAGCTACGTaGGCCAACAGTCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILGEKAT*ANSQAC
Trigger: GCATGCCTGACTGTTGGCCCACGTAGCTTTTTCCCC...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCTCAGCATTCTCTAATTaGACACTTGTCAAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: FGSCLSQTRGTSWQPASASAFSN*TLVKRN
Trigger: GTTCCTTTTGACAAGTGTCCAATTAGAGAATGCTGA...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGTGGCACCTCAACAACTaGAGAGAGTGGGTGCCACTA +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWWHLNN*REWVPL
Trigger: TAGTGGCACCCACTCTCTTCAGTTGTTGAGGTGCCA...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATGCAGGTCAGACATCTaGAGCCCGCGCACGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLCRSDI*SPRTEL
Trigger: GAGCTCCGTGCGCGGGCTGCAGATGTCTGACCTGCA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATATTGAGGACCTGGGCCTaGTCTGCAGGCAGCAAATCC +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQILRTWA*SAGSKS
Trigger: GGATTTGCTGCCTGCAGACCAGGCCCAGGTCCTCAA...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTCCTCCAAAGGCAGTGTaGTCTCCCAGCTATGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIPPKAV*SPSYAE
Trigger: CTCTGCATAGCTGGGAGACCACACTGCCTTTGGAGG...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCACTGAAGCCTGCTACCTaGAGGCTTCATCTACATGAC +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSLKPAT*RLHLHD
Trigger: GTCATGTAGATGAAGCCTCCAGGTAGCAGGCTTCAG...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTACCCCAACCGGCTGAATaGACCCCTGTCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLPQPAE*TPVLAQ
Trigger: CTGGGCCAAGACAGGGGTCCATTCAGCCGGTTGGGG...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGGAGACAAAGGACTCTaGAATCCTGGAATCACGGGA +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWGDKGL*NPGITG
Trigger: TCCCGTGATTCCAGGATTTCAGAGTCCTTTGTCTCC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAAGCTATCCAATGGGATaGCACACAGCAAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSSYPMG*HTANQL
Trigger: GAGCTGATTTGCTGTGTGTCATCCCATTGGATAGCT...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCTCCAAAGGACCAGTTaGTTTCCGCAGATCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWLQRTS*FPQIFR
Trigger: ACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGTGGGTGCCACTAAATaGACTGGCAATAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWVGATK*TGNKGC
Trigger: ACAGCCCTTATTGCCAGTGCATTTAGTGGCACCCAC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGCCTTCATGGGCAATGTaGTTTTCCCTCTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILPSWAM*FSLFWH
Trigger: GTGCCAGAAGAGGGAAAAGCACATTGCCCATGAAGG...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGAAACGGTGTAACTTATaGCCCTCCCTTATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLKRCNL*PSLMLH
Trigger: GTGGAGCATAAGGGAGGGGCATAAGTTACACCGTTT...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGACACGCTTCCCCTCTaGATGAGTAGGTACCCGGAT +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIDTLPL*MSRYPD
Trigger: ATCCGGGTACCTACTCATCCAGAGGGGAAGCGTGTC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGCAGCAGTCCTTCAGCTaGTGTAGTAGATGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLQQSFS*CSRCGS
Trigger: ACTTCCACATCTACTACACCAGCTGAAGGACTGCTG...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAGATGGGGCTCCTTCATaGGCAATGTGCTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKDGAPS*AMCFSL
Trigger: GAGGGAAAAGCACATTGCCCATGAAGGAGCCCCATC...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAATTACCCTCTTCCCTTTaGAATTTAAATACAACTGAC +
Preference number: 4 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQELPSSL*NLNTTD
Trigger: GTCAGTTGTATTTAAATTCCAAAGGGAAGAGGGTAA...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATATGTTTCACCAAGGCCTaGGCCTCCAAAGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQICFTKA*ASKGPV
Trigger: AACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACA...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAGACCTCTGTGGAACTTaGTACTTAGCCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSDLCGT*YLAISL
Trigger: CAATGAGATGGCTAAGTATCAAGTTCCACAGAGGTC...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGTCTTTGATCTACCTCTaGCCTGGAAACCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILSLIYL*PGNPHL
Trigger: AAGATGGGGGTTTCCAGGTCAGAGGTAGATCAAAGA...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTTGGTATAGCATCACATaGCAGCAGGCCCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIWYSIT*QQAPKE
Trigger: TTCCTTTGGGGCCTGCTGTCATGTGATGCTATACCA...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTCCAACAGAGCCGATATaGAGGGGACATTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIPTEPI*RGHSQH
Trigger: ATGCTGAGAATGTCCCCTGCATATCGGCTCTGTTGG...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAGGCATCCTTACTCACTaGAGATACCATCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKGILTH*RYHLWP
Trigger: AGGCCACAGATGGTATCTCCAGTGAGTAAGGATGCC...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGCCTGTATGTTCAGACTaGATCATAACGATGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLPVCSD*IITMSP
Trigger: TGGGGACATCGTTATGATCCAGTCTGAACATACAGG...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTATGGGCTCTGAACCTTaGCAAAATAAACCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFMGSEP*QNKPLN
Trigger: ATTTAGAGGTTTATTTTGCCAAGGTTCAGAGCCCAT...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp CCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATaGATTTATGGCTTTGCCTGGACCTTCTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PFQAKPVYTLHV*IYGFAWTFCLP
Trigger: AGGGAGACAGAAGGTCCAGGCAAAGCCATAAATCAATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGCACCAGCTGGCAGCCTaGTTCAGCCAGCAAATACAG +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWHQLAA*FSQQIQ
Trigger: CTGTATTTGCTGGCTGAAGCAGGCTGCCAGCTGGTG...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCTGTCACCAGGGAAATaGAAGCTTTGGTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWLSPGK*KLWSGK
Trigger: TTTACCTGACCAAAGCTTGCATTTCCCTGGTGACAG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp ACAGAGCCGATATGCAGGGGACATTCTCAGCATTCTCTAATTGGACACTTGTCAGTTAGGGAATTCCTCTaGACTCAATCTCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: TEPICRGHSQHSLIGHLSVREFL*TQSPAN
Trigger: ATTTGCTGGAGATTGAGTGCAGAGGAATTCCCTAAC...TGACAAGTGTCCAATTAGAGAATGCTGAGAATGTCCCCTGCATATCGGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGAGGGGAAGAGCAGGTaGAGGATATATTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIEGKSR*RIYCPL
Trigger: CAAAGGGCAATATATCCTGCACCTGCTCTTCCCCTC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGGATGGGAAGACAGGGTaGCTCATATTATGGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWDGKTG*LILWSD
Trigger: ATCTGACCATAATATGAGGCACCCTGTCTTCCCATC...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAAGGGTTCTGGATCGGTaGCAGAAGCCAATAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIRVLDR*QKPIKR
Trigger: CCTCTTTATTGGCTTCTGCCACCGATCCAGAACCCT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGAAACATGGAGTAAGGTaGCATCATCCATCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLKHGVR*HHPSLK
Trigger: CTTCAGAGATGGATGATGCCACCTTACTCCATGTTT...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTACTGTACCCCAAACATaGAGTAAGGTGGCATCATCC +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCITVPQT*SKVASS
Trigger: GGATGATGCCACCTTACTCCATGTTTGGGGTACAGT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGCTACTAGGGACCCACTaGGAAGAGTCCCGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWLLGTH*EESRSL
Trigger: CAAGGAACGGGACTCTTCCCAGTGGGTCCCTAGTAG...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGGAATTTGCTGGGCTGTaGGTTCTCAGTAATTACCTG +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILEFAGL*VLSNYL
Trigger: CAGGTAATTACTGAGAACCCACAGCCCAGCAAATTC...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGATTTATGGCTTTGCCTaGACCTTCTGTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILIYGFA*TFCLPQ
Trigger: TTGAGGGAGACAGAAGGTCCAGGCAAAGCCATAAAT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATACCAGTGTCTTGCCTTTaGACTGTGTGTGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIPVSCL*TVCVRH
Trigger: ATGCCTCACACACACAGTCCAAAGGCAAGACACTGG...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGACTGATCTGAGTACATaGCACCAAAGAAAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILTDLST*HQRKPF
Trigger: GAAGGGCTTTCTTTGGTGCCATGTACTCAGATCAGT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp GAATCACATCATGAGCCTAATTTCAAAGCCAGTGTCTaGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTT +
Preference number: 4 (lower is better)
Translates to: ESHHEPNFKASV*PLDCVCEACLF
Trigger: AAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAATTAGGCTCATGATGTGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGAGATTCCAAATCAGCTaGAAGAACATCTATAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLRFQIS*KNIYSS
Trigger: GGAGCTATAGATGTTCTTTCAGCTGATTTGGAATCT...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGAAGCCGTCACAGGACTaGCCTACAGAAATAAAACAT +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWKPSQD*PTEIKH
Trigger: ATGTTTTATTTCTGTAGGTCAGTCCTGTGACGGCTT...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGAAGCAAGGCTTTAGCTaGCTAGAAAACAGCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWKQGFS*LENSSV
Trigger: TACTGAGCTGTTTTCTAGTCAGCTAAAGCCTTGCTT...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATATCCCTTAGGCTTCCCTaGTGCAACAGAACTAGGATT +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQISLRLP*CNRTRI
Trigger: AATCCTAGTTCTGTTGCATCAGGGAAGCCTAAGGGA...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTCTGGAATCACTGACCTaGACAGTTATGTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCILESLT*TVMSVL
Trigger: TAGCACTGACATAACTGTGCAGGTCAGTGATTCCAG...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAACTCCACATCTCCAGCTaGAACGGGTTCTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKLHISS*NGFFNL
Trigger: GAGATTGAAGAACCCGTTCCAGCTGGAGATGTGGAG...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTAGCAGTGGTGACAGGCTaGATAGAGCTTTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLAVVTG*IELSPT
Trigger: GGTTGGAGAAAGCTCTATCCAGCCTGTCACCACTGC...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTCACTCAGCTATCCAATaGGATGACACACAGCAAATC +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIHSAIQ*DDTQQI
Trigger: GATTTGCTGTGTGTCATCCCATTGGATAGCTGAGTG...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGGGTGCCTCATATTATaGTCAGATTACAGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIGCLIL*SDYRVP
Trigger: AGGCACCCTGTAATCTGACCATAATATGAGGCACCC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp TTGACGTATTTTGAAATGGCCCTACAAAGCTGTCTCTaGTGGGGGAAACTGCATTCTGTAGAGAATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LTYFEMALQSCL*WGKLHSVENLL
Trigger: AAGGAGATTCTCTACAGAATGCAGTTTCCCCCACAAGAGACAGCTTTGTAGGGCCATTTCAAAATACGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCAGTTAGCTAAGGCATaGTTCAACTTCAATGATGCA +
Preference number: 4 (lower is better)
Translates to: LDCVCEACLFVNELHYHWQLAKA*FNFNDA
Trigger: TGCATCATTGAAGTTGAATCATGCCTTAGCTAACTG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGGTAACCCATGTTGAATaGAACAGGTCTGCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLVTHVE*NRSAKN
Trigger: ATTTTTAGCAGACCTGTTTCATTCAACATGGGTTAC...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAACTTGAGAGGCAGCAGTaGTTTCTGAGCAAAATTCTA +
Preference number: 4 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKLERQQ*FLSKIL
Trigger: TAGAATTTTGCTCAGAAATCACTGCTGCCTCTCAAG...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGAAAAAGATAAAACAGTaGCACGGTTTCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILKKIKQ*HGFPSR
Trigger: TCTGGAAGGGAAACCGTGTCACTGTTTTATCTTTTT...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGAGTAGAGAGTCTTGTTaGGCAGCAGGGAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWSRESC*AAGSRS
Trigger: ACTCCTACTCCCTGCTGCGCAACAAGACTCTCTACT...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp ATTTCAAAGCCAGTGTCTTGCCTTTGGACTGTGTGTGTGAGGCATGCCTATTTGTCACATATATTATTTTaGCCCCAGATAAGCCACAAC +
Preference number: 4 (lower is better)
Translates to: ISKPVSCLWTVCVRHAYLSHILF*PQISHN
Trigger: GTTGTGGCTTATCTGGGGGCAAAATAATATATGTGA...CAAATAGGCATGCCTCACACACACAGTCCAAAGGCAAGACACTGGCTTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAAGGACTCTGAAATCCTaGAATCACGGGATATCTCTG +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIRTLKS*NHGISL
Trigger: CAGAGATATCCCGTGATTCCAGGATTTCAGAGTCCT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAAGAATGGGAATGCTCTaGCAGTCCCCAACATCCTAT +
Preference number: 4 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKRMGML*QSPTSY
Trigger: ATAGGATGTTGGGGACTGCCAGAGCATTCCCATTCT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTAAAAACCAGTATGAATaGAATGTAACCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIKNQYE*NVTMPR
Trigger: CCTGGGCATGGTTACATTTCATTCATACTGGTTTTT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATACTTTTCTGGAGAGTCTaGCACCTTTTAAGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQILFWRV*HLLRPK
Trigger: TTTAGGCCTTAAAAGGTGTCAGACTCTCCAGAAAAG...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTTTAATATCAGAGTCCTaGGGACATGTCATCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCILISES*GHVIKQ
Trigger: TTGCTTGATGACATGTCCTCAGGACTCTGATATTAA...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGTTCCTTTTAGGCTTGTaGCCCATAGGTGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWFLLGL*PIGAFK
Trigger: CTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAA...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGCCGTTCCTTGAGTTATaGTACTGTAGGGATAGACCC +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWPFLEL*YCRDRP
Trigger: GGGTCTATCCCTACAGTAGCATAACTCAAGGAACGG...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAAACATGTATTGATTTATaGCTTTGCCTGGACCTTCTG +
Preference number: 4 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKTCIDL*LCLDLL
Trigger: CAGAAGGTCCAGGCAAAGCCATAAATCAATACATGT...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGAAACAGCAGAGATCATaGCCTGAGGGAAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWKQQRS*PEGRGK
Trigger: TTTTCCCCTTCCCTCAGGCCATGATCTCTGCTGTTT...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGTTTCCAGATGATTCTTaGCCTGATCCTAAGAATCAA +
Preference number: 4 (lower is better)
Translates to: LLGCGFSVITCASVSSILFPDDS*PDPKNQ
Trigger: TTGATTCTTAGGATCAGGCCAAGAATCATCTGGAAA...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAGGTACACCAGATTCATaGGTTACAGGATTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIGTPDS*VTGLLS
Trigger: AGAAAGCAATCCTGTAACCCATGAATCTGGTGTACC...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAATGATTCAACTTCAATaGTGCAAGAGCGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKMIQLQ*CKSGHS
Trigger: TGAGTGACCGCTCTTGCATCATTGAAGTTGAATCAT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAAACCCTGACAGTTGGTaGAAAACCAGTATGAATGAA +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQINPDSW*KTSMNE
Trigger: TTCATTCATACTGGTTTTTCACCAACTGTCAGGGTT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTACTCTCAAAGAGGGACTaGGCAGGACTCATAAACATA +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLLSKRD*AGLINI
Trigger: TATGTTTATGAGTCCTGCTCAGTCCCTCTTTGAGAG...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTAGAGCCCCTTAAACTCTaGATTAAGGGCTCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLEPLKL*IKGSLV
Trigger: TACCAAAGAGCCCTTAATTCAGAGTTTAAGGGGCTC...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTACTCTTGTACTGACATaGCAGTTAGTAAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCITLVLT*QLVRKT
Trigger: TGTTTTCCTTACTAACTGGCATGTCAGTACAAGAGT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR GCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATATGCCCCTCCCTTATaGTCCACTAAAACAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLYAPPL*STKTSL
Trigger: GAGACTTGTTTTAGTGGAGCATAAGGGAGGGGCATA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATCAATCTCCAGCAAATaGGCAGATTCCCTCACAACT +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLSISSK*ADSLTT
Trigger: AGTTGTGAGGGAATCTGCCCATTTGCTGGAGATTGA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAGTAGGGATAGACCCTTaGTGTGAGGAATCTAACAAT +
Preference number: 4 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKVGIDP*CEESNN
Trigger: ATTGTTAGATTCCTCACACCAAGGGTCTATCCCTAC...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp AAATTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTaGTTTAGCCTTCTTGGTTTAGGCAGGGACAATGCA +
Preference number: 4 (lower is better)
Translates to: KFLTLRIQTGGA*FSLLGLGRDNA
Trigger: TGCATTGTCCCTGCCTAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGTTGCTGTGTATGGCCTaGCTGTTTCAATTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWLLCMA*LFQFER
Trigger: TCTCTCAAATTGAAACAGTCAGGCCATACACAGCAA...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATTTGGACTGTGTGTGTaGGGCATGCCTATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLFGLCV*GMPICK
Trigger: TTTACAAATAGGCATGCCTCACACACACAGTCCAAA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAACTTCAGAAGGGTTCATaGTCCTATTTCAGGACTTTA +
Preference number: 4 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKLQKGS*SYFRTL
Trigger: TAAAGTCCTGAAATAGGATCATGAACCCTTCTGAAG...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGTACGTTAAGGGAAAATaGGTACACCAGATTCATGGG +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWYVKGK*VHQIHG
Trigger: CCCATGAATCTGGTGTACCCATTTTCCCTTAACGTA...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCACTGGGGTTAAAAGGCAACCTTCTGCAGATAAGTGGTCTTAACAAACAAATAAAAACAGCTCTCTTCTaGGAATTTCAAAACACTTCC +
Preference number: 4 (lower is better)
Translates to: PLGLKGNLLQISGLNKQIKTALF*EFQNTS
Trigger: GGAAGTGTTTTGAAATTCCCAGAAGAGAGCTGTTTT...TATTTGTTTGTTAAGACCACTTATCTGCAGAAGGTTGCCTTTTAACCCCAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGGAAACTTTGGAAACCTaGTTGGGTTTCACTGCATTT +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWETLET*LGFTAF
Trigger: AAATGCAGTGAAACCCAATCAGGTTTCCAAAGTTTC...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAATACCTTACATGTATTaGTTTATGGCTTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKIPYMY*FMALPG
Trigger: TCCAGGCAAAGCCATAAATCAATACATGTAAGGTAT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp TCTTCCCACAAGATCTTAGGTTACATTGATCATCACTaGAGATTGCATGAATGTTCTTGCTGTAATGGCAAA +
Preference number: 4 (lower is better)
Translates to: SSHKILGYIDHH*RLHECSCCNGK
Trigger: TTTGCCATTACAGCAAGAACATTCATGCAATCTCAAGTGATGATCAATGTAACCTAAGATCTTGTGGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp ATCTCTAGATTTCTAGGGCAACTTTTCATCATATCTTaGAAGAGTCATGACATTAACTCTGGTCCACATACC +
Preference number: 4 (lower is better)
Translates to: ISRFLGQLFIIS*KSHDINSGPHT
Trigger: GGTATGTGGACCAGAGTTAATGTCATGACTCTTCAAAGATATGATGAAAAGTTGCCCTAGAAATCTAGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGGATCTTAGGTTACATTaGTCATCACTTGAGATTGCA +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWDLRLH*SSLEIA
Trigger: TGCAATCTCAAGTGATGATCAATGTAACCTAAGATC...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR TCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGATGCCTATTTGTAAATaGGCTCCACTATCATTGGTT +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWMPICK*APLSLV
Trigger: AACCAATGATAGTGGAGCTCATTTACAAATAGGCAT...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTACTTTGGAAACCTGATTaGGTTTCACTGCATTTGATT +
Preference number: 4 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLLWKPD*VSLHLI
Trigger: AATCAAATGCAGTGAAACCCAATCAGGTTTCCAAAG...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CCA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGCTTCTGAGAAACAGATaGAAACTGTTTCAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWLLRNR*KLFQRQ
Trigger: TTGCCTTTGAAACAGTTTCCATCTGTTTCTCAGAAG...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
3UTR CAA 72 bp CACAAGATCTTAGGTTACATTGATCATCACTTGAGATaGCATGAATGTTCTTGCTGTAATGGCAAAAACATA +
Preference number: 4 (lower is better)
Translates to: HKILGYIDHHLR*HECSCCNGKNI
Trigger: TATGTTTTTGCCATTACAGCAAGAACATTCATGCAATCTCAAGTGATGATCAATGTAACCTAAGATCTTGTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 90 bp CCTGGGCGGGCTGTGGGGCTCCAGGAGCCCGGCCCCTCAGCCGCCTaGAGGTCAGACATCTGCAGCCCGCGCACGGAGCTCTCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: PGRAVGLQEPGPSAA*RSDICSPRTELSAA
Trigger: GGCAGCGGAGAGCTCCGTGCGCGGGCTGCAGATGTCTGACCTGCAGGCGGCTGAGGGGCCGGGCTCCTGGAGCCCCACAGCCCGCCCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 90 bp TGCCAGCCTGCACGTCTCGGTGGCTGTCCCGCCGGTACACAGGCATaGCCTCCCCATAGCGACCCCGCAAGGAGCTCCTGGAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: CQPARLGGCPAGTQA*PPHSDPARSSWSLS
Trigger: AGAGAGGCTCCAGGAGCTCCTTGCGGGGTCGCTATGGGGAGGTCATGCCTGTGTACCGGCGGGACAGCCACCGAGACGTGCAGGCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 90 bp ACCTGGGCCTGGTCTGCAGGCAGCAAATCCTGTTTCACCAAGGCCTaGGCCTCCAAAGGACCAGTTGCTTTCCGCAGATCTTCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: TWAWSAGSKSCFTKA*ASKGPVAFRRSSVA
Trigger: TGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACAGGATTTGCTGCCTGCAGACCAGGCCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 90 bp CTTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTaGTTCAGCCAGCAAATACAGCCTGCCCCTGTCCCAGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LWLLPIPNKRHQLAA*FSQQIQPAPVPAVL
Trigger: AAGGACTGCTGGGACAGGGGCAGGCTGTATTTGCTGGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 90 bp GTCATAGTCATCGGTCGCAAACTCCCAGCAGACACGCTTCCCCTCTaGATGAGTAGGTACCCGGATGGTCACCACCTCACCACGCTTCAC +
Preference number: 5 (lower is better)
Translates to: VIVIGRKLPADTLPL*MSRYPDGHHLTTLH
Trigger: GTGAAGCGTGGTGAGGTGGTGACCATCCGGGTACCTACTCATCCAGAGGGGAAGCGTGTCTGCTGGGAGTTTGCGACCGATGACTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 90 bp AGGCCTGAGCCTCCAAAGGACCAGTTGCTTTCCGCAGATCTTCCGTaGCATCCTTACTCACTGGAGATACCATCTGTGGCCTGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RPEPPKDQLLSADLP*HPYSLEIPSVACGV
Trigger: CACCCCACAGGCCACAGATGGTATCTCCAGTGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCGCCAGTGTCTTGCCTTaGGACTGTGTGTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: FGSCLSQTRGTSWQPASAASVLP*DCVCEA
Trigger: TGCCTCACACACACAGTCCAAAGGCAAGACACTGGC...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 90 bp TCAGCCAGCAAATACAGCCTGCCCCTGTCCCAGCAGTCCTTCAGCTaGTGTAGTAGATGTGGAAGTAGAGAGTCTTGTTGCGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SASKYSLPLSQQSFS*CSRCGSRESCCAAG
Trigger: CCCTGCTGCGCAACAAGACTCTCTACTTCCACATCTACTACACCAGCTGAAGGACTGCTGGGACAGGGGCAGGCTGTATTTGCTGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAATGCTTCCTTTTAGGCTaGTGCCCCATAGGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQECFLLG*CPIGAF
Trigger: GAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCA...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 90 bp TGGAACTTGATACTTAGCCATCTCATTGAGGACCTGGGCCTGGTCTaGAGGCAGCAAATCCTGTTTCACCAAGGCCTGAGCCTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: WNLILSHLIEDLGLV*RQQILFHQGLSLQR
Trigger: CCTTTGGAGGCTCAGGCCTTGGTGAAACAGGATTTGCTGCCTGCAGACCAGGCCCAGGTCCTCAATGAGATGGCTAAGTATCAAGTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGGGGACAATGCAACACTaGAGAGGCAGCAGTGATTTC +
Preference number: 5 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQGTMQH*RGSSDF
Trigger: GAAATCACTGCTGCCTCTCAAGTGTTGCATTGTCCC...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 90 bp CAGCAAATCCTGTTTCACCAAGGCCTGAGCCTCCAAAGGACCAGTTaGTTTCCGCAGATCTTCCGTGGCATCCTTACTCACTGGAGATAC +
Preference number: 5 (lower is better)
Translates to: QQILFHQGLSLQRTS*FPQIFRGILTHWRY
Trigger: GTATCTCCAGTGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACAGGATTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGTTGAATTCCTTCACCTaGGCAAAGGTCCAGATGCAT +
Preference number: 5 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQLNSFT*AKVQMH
Trigger: ATGCATCTGGACCTTTGCCAAGGTGAAGGAATTCAA...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGATCCCACTTGGGGCTTaGCTCCGAGGGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LDCVCEACLFVNELHYHWIPLGA*LRGEEQ
Trigger: CTGCTCTTCCCCTCGGAGCAAAGCCCCAAGTGGGAT...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 90 bp TCCTGTATGTTCAGACTGGATCATAACGATGTCCCCAGACCTCTGTaGAACTTGATACTTAGCCATCTCATTGAGGACCTGGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SCMFRLDHNDVPRPL*NLILSHLIEDLGLV
Trigger: GACCAGGCCCAGGTCCTCAATGAGATGGCTAAGTATCAAGTTCCACAGAGGTCTGGGGACATCGTTATGATCCAGTCTGAACATACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTTGGCTCTTGCCTATCCCAAACAAGAGGCACCAGCTGGCAGCCTGCTTCAGCCGATCATCACTTGAGATaGCATGAATGTTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: FGSCLSQTRGTSWQPASADHHLR*HECSCC
Trigger: ACAGCAAGAACATTCATGCAATCTCAAGTGATGATC...GGCTGAAGCAGGCTGCCAGCTGGTGCCTCTTGTTTGGGATAGGCAAGAGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTCTACAAAGCTGTCTCTaGTGGGGGAAACTGCATTCT +
Preference number: 5 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFLQSCL*WGKLHS
Trigger: AGAATGCAGTTTCCCCCACAAGAGACAGCTTTGTAG...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGCCTCCAAAGGACCAGTaGCTTTCCGCAGATCTTCCG +
Preference number: 5 (lower is better)
Translates to: LLGCGFSVITCASVSSILPPKDQ*LSADLP
Trigger: CGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGG...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTAACATCCTATCCCACTaGGGGCTTTGCTCCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCINILSH*GLCSEG
Trigger: CCCCTCGGAGCAAAGCCCCAAGTGGGATAGGATGTT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTGCTGGGCTGTGGGTTCTCAGTAATTACCTGTGCTTCAGTAAGTAGTATCTTGTCCACTCTCTCCACTTaGACTGCCAGTGCCCATAGT +
Preference number: 5 (lower is better)
Translates to: LLGCGFSVITCASVSSILSTLST*TASAHS
Trigger: ACTATGGGCACTGGCAGTCAAAGTGGAGAGAGTGGA...CAAGATACTACTTACTGAAGCACAGGTAATTACTGAGAACCCACAGCCCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp GAGTCAGGGACTACAGAACAGGGGCACTACACCACCACCTGCAGAAGCCAAGAACACAGATGTATTTTCTaGAAAGATGGAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: ESGTTEQGHYTTTCRSQEHRCIF*KDGDQE
Trigger: TTCTTGGTCTCCATCTTTCAAGAAAATACATCTGTG...TTCTTGGCTTCTGCAGGTGGTGGTGTAGTGCCCCTGTTCTGTAGTCCCTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCCATCTCTGAAGGGCCATACTCCTCGCAAAGCCGTCACAGGACTGACCTACAGTTCACATATATTATTTaGCCCCCAGATAAGCCACAA +
Preference number: 5 (lower is better)
Translates to: SISEGPYSSQSRHRTDLQFTYII*PPDKPQ
Trigger: TTGTGGCTTATCTGGGGGCAAAATAATATATGTGAA...CTGTAGGTCAGTCCTGTGACGGCTTTGCGAGGAGTATGGCCCTTCAGAGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTTACTTAGCCATCTCATaGAGGACCTGGGCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIYLAIS*RTWAWS
Trigger: AGACCAGGCCCAGGTCCTCAATGAGATGGCTAAGTA...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCGCCCTGCTTCCTTTTAGGCTTGTGCCCCATAGGTGCCTTCAAGAGGGAATTTTGGGTTTCACTGCATTaGATTCCAAAGCAACATTTC +
Preference number: 5 (lower is better)
Translates to: SPCFLLGLCPIGAFKREFWVSLH*IPKQHF
Trigger: GAAATGTTGCTTTGGAATCAAATGCAGTGAAACCCA...AAATTCCCTCTTGAAGGCACCTATGGGGCACAAGCCTAAAAGGAAGCAGGGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTGAAGAGTCCCGTTCCTaGAGTTATGCTACTGTAGGG +
Preference number: 5 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIEESRS*SYATVG
Trigger: CCCTACAGTAGCATAACTCAAGGAACGGGACTCTTC...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTTTTGGGTCTATAAATTaGGACTGGGAGGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIFGSIN*DWEGLR
Trigger: CCTCAGCCCCTCCCAGTCCAAATTTATAGACCCAAA...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTATGAACCTTTGGCTCTaGCCTATCCCAAACAAGAGG +
Preference number: 5 (lower is better)
Translates to: SSRCPAFPGQTSVYLTCIMNLWL*PIPNKR
Trigger: CCTCTTGTTTGGGATAGGCAAGAGCCAAAGGTTCAT...AATACATGTAAGGTATACACTGGTTTGGCCTGGAAAGGCAGGACATCTTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAACCTTCAAGAGGGAATTaGCTGGAGTCTGAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKPSRGN*LESEAR
Trigger: TCTTGCTTCAGACTCCAGCAAATTCCCTCTTGAAGG...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTGGACTGTGTGTGTGAGGCATGCCTATTTGTAAATGAGCTCCACTATCATTGGCAAGAACTGAGCTACTaGAAGAAGCACAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LDCVCEACLFVNELHYHWQELSY*KKHSSE
Trigger: TTCTGAGCTGTGCTTCTTCAAGTAGCTCAGTTCTTG...CCAATGATAGTGGAGCTCATTTACAAATAGGCATGCCTCACACACACAGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp AGAGTCTGGGTTTCAACTAATTCTCTCAAAGAGGGACTGAGCAGGACTCATAAATCATGGGTTACAGGATaGCTTTCTCTAGACTTGGCT +
Preference number: 5 (lower is better)
Translates to: RVWVSTNSLKEGLSRTHKSWVTG*LSLDLA
Trigger: AGCCAAGTCTAGAGAAAGCAATCCTGTAACCCATGA...TTTATGAGTCCTGCTCAGTCCCTCTTTGAGAGAATTAGTTGAAACCCAGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATTGCCCAGCTTGCTTTaGAATTCCTTCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLLPSLL*NSFTLA
Trigger: TGCCAAGGTGAAGGAATTCAAAAGCAAGCTGGGCAA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp GTAATCGCAGTAACACACCCAGTGCCACAGGGTGATAAAAATGGTATTTTAAAAAGACCTCTGTGGAACTaGATACTTAGCCATCTCATT +
Preference number: 5 (lower is better)
Translates to: VIAVTHPVPQGDKNGILKRPLWN*ILSHLI
Trigger: AATGAGATGGCTAAGTATCAAGTTCCACAGAGGTCT...TTTTAAAATACCATTTTTATCACCCTGTGGCACTGGGTGTGTTACTGCGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATTCTCTTTGCCCAGCTaGCTTTTGAATTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLFSLPS*LLNSFT
Trigger: GGTGAAGGAATTCAAAAGCAAGCTGGGCAAAGAGAA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGCAAACAGGAGGGGCTTaGTTTAGCCTTCTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWQTGGA*FSLLGL
Trigger: TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTG...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGACTCTGGAGTGTTTTTaGTTTTTCATCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWTLECF*FFIFSV
Trigger: GACAGAGAAGATGAAAAACAAAAAACACTCCAGAGT...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp TTTCTTACCTTAAGAATTCAAACAGGAGGGGCTTTGTTTAGCCTTCTTGGTTTATCTCTAATTGGACACTaGTCAAAAGGAACAGAATGT +
Preference number: 5 (lower is better)
Translates to: FLTLRIQTGGALFSLLGLSLIGH*SKGTEC
Trigger: ACATTCTGTTCCTTTTGACAAGTGTCCAATTAGAGA...TAAACCAAGAAGGCTAAACAAAGCCCCTCCTGTTTGAATTCTTAAGGTAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS-3UTR CAA 90 bp CCTTGGCAAAATAAACCTCTAAATGTATTGAGACCTGTCTCAGATACTTTTTGGTGGTCTAATTCCAAATaGCTACCTACTTCCATGATA +
Preference number: 5 (lower is better)
Translates to: PWQNKPLNVLRPVSDTFWWSNSK*LPTSMI
Trigger: TATCATGGAAGTAGGTAGCAATTTGGAATTAGACCA...CCAAAAAGTATCTGAGACAGGTCTCAATACATTTAGAGGTTTATTTTGCCAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 72 bp GAGCCCGGCCCCTCAGCCGCCTGCAGGTCAGACATCTaGAGCCCGCGCACGGAGCTCTCCGCTGCCAGCCGC +
Preference number: 6 (lower is better)
Translates to: EPGPSAACRSDI*SPRTELSAASR
Trigger: GCGGCTGGCAGCGGAGAGCTCCGTGCGCGGGCTGCAGATGTCTGACCTGCAGGCGGCTGAGGGGCCGGGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 72 bp GCACGTCTCGGTGGCTGTCCCGCCGGTACACAGGCATaGCCTCCCCATAGCGACCCCGCAAGGAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ARLGGCPAGTQA*PPHSDPARSSW
Trigger: CCAGGAGCTCCTTGCGGGGTCGCTATGGGGAGGTCATGCCTGTGTACCGGCGGGACAGCCACCGAGACGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 72 bp GTCGCAAACTCCCAGCAGACACGCTTCCCCTCTGGATaGGTAGGTACCCGGATGGTCACCACCTCACCACGC +
Preference number: 6 (lower is better)
Translates to: VANSQQTRFPSG*VGTRMVTTSPR
Trigger: GCGTGGTGAGGTGGTGACCATCCGGGTACCTACTCATCCAGAGGGGAAGCGTGTCTGCTGGGAGTTTGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 72 bp ATCGGTCGCAAACTCCCAGCAGACACGCTTCCCCTCTaGATGAGTAGGTACCCGGATGGTCACCACCTCACC +
Preference number: 6 (lower is better)
Translates to: IGRKLPADTLPL*MSRYPDGHHLT
Trigger: GGTGAGGTGGTGACCATCCGGGTACCTACTCATCCAGAGGGGAAGCGTGTCTGCTGGGAGTTTGCGACCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 72 bp TCTTGTTGCGCAGCAGGGAGTAGGAGTTGTCGAACTTaGGCAGGTAGATGCCCTCACCAGGGTAGTCATGGC +
Preference number: 6 (lower is better)
Translates to: SCCAAGSRSCRT*AGRCPHQGSHG
Trigger: GCCATGACTACCCTGGTGAGGGCATCTACCTGCTCAAGTTCGACAACTCCTACTCCCTGCTGCGCAACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CAA 90 bp GAGCAGGGTTCTGGATCGGTGGCAGAAGCCAATAAAGAGGTATCCTaGTTTTCTAGATCTTCATTCTCTGAGGCGGCCGCCTGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: EQGSGSVAEANKEVS*FSRSSFSEAAAWLP
Trigger: GGGGAGCCAGGCGGCCGCCTCAGAGAATGAAGATCTAGAAAACAAGGATACCTCTTTATTGGCTTCTGCCACCGATCCAGAACCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 72 bp TGGTCTGCAGGCAGCAAATCCTGTTTCACCAAGGCCTaGGCCTCCAAAGGACCAGTTGCTTTCCGCAGATCT +
Preference number: 6 (lower is better)
Translates to: WSAGSKSCFTKA*ASKGPVAFRRS
Trigger: AGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACAGGATTTGCTGCCTGCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 72 bp CTGTTTCACCAAGGCCTGAGCCTCCAAAGGACCAGTTaGTTTCCGCAGATCTTCCGTGGCATCCTTACTCAC +
Preference number: 6 (lower is better)
Translates to: LFHQGLSLQRTS*FPQIFRGILTH
Trigger: GTGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 72 bp CCTCCAAAGGACCAGTTGCTTTCCGCAGATCTTCCGTaGCATCCTTACTCACTGGAGATACCATCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: PPKDQLLSADLP*HPYSLEIPSVA
Trigger: GGCCACAGATGGTATCTCCAGTGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CAA 72 bp CCTGTTTCACCAAGGCCTGAGCCTCCAAAGGACCAGTaGCTTTCCGCAGATCTTCCGTGGCATCCTTACTCA +
Preference number: 6 (lower is better)
Translates to: PVSPRPEPPKDQ*LSADLPWHPYS
Trigger: TGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CAA 90 bp GCAGCAAATCCTGTTTCACCAAGGCCTGAGCCTCCAAAGGACCAGTaGCTTTCCGCAGATCTTCCGTGGCATCCTTACTCACTGGAGATA +
Preference number: 6 (lower is better)
Translates to: AANPVSPRPEPPKDQ*LSADLPWHPYSLEI
Trigger: TATCTCCAGTGAGTAAGGATGCCACGGAAGATCTGCGGAAAGCAACTGGTCCTTTGGAGGCTCAGGCCTTGGTGAAACAGGATTTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 72 bp TGGATCATAACGATGTCCCCAGACCTCTGTGGAACTTaGTACTTAGCCATCTCATTGAGGACCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: WIITMSPDLCGT*YLAISLRTWAW
Trigger: CCAGGCCCAGGTCCTCAATGAGATGGCTAAGTATCAAGTTCCACAGAGGTCTGGGGACATCGTTATGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CAA 72 bp CTGGATCATAACGATGTCCCCAGACCTCTGTGGAACTaGATACTTAGCCATCTCATTGAGGACCTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LDHNDVPRPLWN*ILSHLIEDLGL
Trigger: CAGGCCCAGGTCCTCAATGAGATGGCTAAGTATCAAGTTCCACAGAGGTCTGGGGACATCGTTATGATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CAA 72 bp TCTGGATCGGTGGCAGAAGCCAATAAAGAGGTATCCTaGTTTTCTAGATCTTCATTCTCTGAGGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SGSVAEANKEVS*FSRSSFSEAAA
Trigger: GGCGGCCGCCTCAGAGAATGAAGATCTAGAAAACAAGGATACCTCTTTATTGGCTTCTGCCACCGATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS GCA 72 bp TCTTCTTCATCCTCATCGTCACTGGAATCACTGACCTaGACAGTTATGTCAGTGCTAGTTACAGGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSLESLT*TVMSVLVTGVQ
Trigger: CTGGACCCCTGTAACTAGCACTGACATAACTGTGCAGGTCAGTGATTCCAGTGACGATGAGGATGAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 72 bp TTCAGACTGGATCATAACGATGTCCCCAGACCTCTGTaGAACTTGATACTTAGCCATCTCATTGAGGACCTG +
Preference number: 6 (lower is better)
Translates to: FRLDHNDVPRPL*NLILSHLIEDL
Trigger: CAGGTCCTCAATGAGATGGCTAAGTATCAAGTTCCACAGAGGTCTGGGGACATCGTTATGATCCAGTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS TCA 72 bp GTGGTCCCCCAGAAGATCTGCAGATTCCAAATCAGCTaGAAGAACATCTATAGCTCCTGTATGTTCAGACTG +
Preference number: 6 (lower is better)
Translates to: VVPQKICRFQIS*KNIYSSCMFRL
Trigger: CAGTCTGAACATACAGGAGCTATAGATGTTCTTTCAGCTGATTTGGAATCTGCAGATCTTCTGGGGGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216468.8
CDS CCA 72 bp GCTGAAAGAACATCTATAGCTCCTGTATGTTCAGACTaGATCATAACGATGTCCCCAGACCTCTGTGGAACT +
Preference number: 6 (lower is better)
Translates to: AERTSIAPVCSD*IITMSPDLCGT
Trigger: AGTTCCACAGAGGTCTGGGGACATCGTTATGATCCAGTCTGAACATACAGGAGCTATAGATGTTCTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216468.8