Pregenerated sensors for TMED2 (Homo sapiens)
Ensembl gene IDs: ENSG00000086598Ensembl transcript IDs: ENST00000262225.8, ENST00000509052.2, ENST00000543425.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGGCCGTTAGTTTCACAGAGGAAGAACAGTTTCTACAGGTGGTaGTCTAGTCTCCGGTTCCACCTTTCACTCTTTTCTGTGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SRPLVSQRKNSFYRW*SSLRFHLSLFSVAL Trigger: CAAGGCCACAGAAAAGAGTGAAAGGTGGAACCGGAGACTAGATCACCACCTGTAGAAACTGTTCTTCCTCTGTGAAACTAACGGCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACAAAGCCACCACTCACTaGGACACCCAGAGAATTGGC | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINKATTH*DTQRIG Trigger: GCCAATTCTCTGGGTGTCCCAGTGAGTGGTGGCTTT...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACCAAGAGTGGGAGAAGTaGATGTGCCAATGTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINQEWEK*MCQCGK Trigger: CTTTCCACATTGGCACATTCACTTCTCCCACTCTTG...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTCAGAGAAGCCACACTaGAAAACCTACGCAGAAACT | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINSEKPH*KTYAET Trigger: AGTTTCTGCGTAGGTTTTCCAGTGTGGCTTCTCTGA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACGCAGAAACCCAGAAATaGTTATTAGCTGCTTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINAETQK*LLAACV Trigger: GACACAAGCAGCTAATAACCATTTCTGGGTTTCTGC...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTGGGAAAATGTATGCTaGGTCGTAGTTTTAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINWENVC*VVVLKQ Trigger: TTGCTTTAAAACTACGACTCAGCATACATTTTCCCA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACGTGGCTGTATATCAATaGAATGAAATCCAAGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINVAVYQ*NEIQEA Trigger: AGCTTCTTGGATTTCATTTCATTGATATACAGCCAC...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTCATTAATAAACTGTTaGAAGTGTTCTCACCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINSLINC*KCSHPR Trigger: CCTTGGGTGAGAACACTTGCAACAGTTTATTAATGA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACGCAGAAACTAAAACTTaGTACCATTCACTATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ALGKSFNLSLKLFPTFINAETKT*YHSLSS Trigger: TGAGGATAGTGAATGGTACCAAGTTTTAGTTTCTGC...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR TCA 72 bp | TTAGTTTCACAGAGGAAGAACAGTTTCTACAGGTGGTaGTCTAGTCTCCGGTTCCACCTTTCACTCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LVSQRKNSFYRW*SSLRFHLSLFS Trigger: AGAAAAGAGTGAAAGGTGGAACCGGAGACTAGATCACCACCTGTAGAAACTGTTCTTCCTCTGTGAAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTTTCACTTACAGTGTTaGAGTTCCTGGAAGGACCTA | + |
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Preference number: 3 (lower is better) Translates to: ALGKSFNLSLKLFPTFINFHLQC*SSWKDL Trigger: TAGGTCCTTCCAGGAACTCAAACACTGTAAGTGAAA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACCTCATTAATAAACTGTaGCAAGTGTTCTCACCCAAG | + |
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Preference number: 3 (lower is better) Translates to: ALGKSFNLSLKLFPTFINLINKL*QVFSPK Trigger: CTTGGGTGAGAACACTTGCAACAGTTTATTAATGAG...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR GCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACAGCCAGGACCCGGACTaGGGCCTCCACAGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINSQDPD*GLHSRR Trigger: GCGGCGGCTGTGGAGGCCGCAGTCCGGGTCCTGGCT...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTCACCATGGTGGGGCTaGGGCCGAAGCCAGGACCCG | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINSPWWG*GRSQDP Trigger: CGGGTCCTGGCTTCGGCCTCAGCCCCACCATGGTGA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACAATAGCCCGAGACCGTaGCCAGGAGAGCGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINNSPRP*PGERPE Trigger: TTCTGGCCGCTCTCCTGGCCACGGTCTCGGGCTATT...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTCTTGGTGCCCGAGGTaGCCCGCTCAAAGAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINSWCPR*PAQRST Trigger: AGTGCTTCTTTGAGCGGGTCACCTCGGGCACCAAGA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACAAGCACTCTTCAGCATaGGCGTCGATGCTAACGAAA | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINKHSSA*ASMLTK Trigger: TTTCGTTAGCATCGACGCCCATGCTGAAGAGTGCTT...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTCTAGCTTGTTCTGGTaGGCTTCTGTTTCCATATCT | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINSSLFW*ASVSIS Trigger: AGATATGGAAACAGAAGCTCACCAGAACAAGCTAGA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR TCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACTGTTTGTGTTGTCGTTaGTGGCTCTGTGTATTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINCLCCR*WLCVFS Trigger: AGAGAATACACAGAGCCATCAACGACAACACAAACA...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR CCA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACAATTCCTTTGTTATCTaGTCCTGTAATCTCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: ALGKSFNLSLKLFPTFINNSFVI*SCNLHV Trigger: GACGTGGAGATTACAGGACCAGATAACAAAGGAATT...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS TCA 90 bp | CTGTTTGTGTTGTCGTTGACTTCACCATCAGACACTGCTGCAAAGTaGCGGCATTCACTTACTGGCTCTGTGTATTCTCTCCCGGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LFVLSLTSPSDTAAK*RHSLTGSVYSLPDF Trigger: GAAGTCCGGGAGAGAATACACAGAGCCAGTAAGTGAATGCCGTCACTTTGCAGCAGTGTCTGATGGTGAAGTCAACGACAACACAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543425.1 |
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| CDS TCA 90 bp | ACCCAAACTCTCATCCCAGTCTGCTACAAATCAGCTGTTAGGCTGTaGTCAAGTCAGTCGCTCTTTCAAAGTGCATGTCACTTGCATAAC | + |
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Preference number: 5 (lower is better) Translates to: TQTLIPVCYKSAVRL*SSQSLFQSACHLHN Trigger: GTTATGCAAGTGACATGCACTTTGAAAGAGCGACTGACTTGATCACAGCCTAACAGCTGATTTGTAGCAGACTGGGATGAGAGTTTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS GCA 90 bp | CCGTTATCCCCTTATTTTTGGATTTCACTTGTATTGTGTAACTTGTaGCCAGCCCTACTGAGTACACTGTCAAATGGAAACTCCTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: PLSPYFWISLVLCNL*PALLSTLSNGNSLD Trigger: GTCTAAGGAGTTTCCATTTGACAGTGTACTCAGTAGGGCTGGGCACAAGTTACACAATACAAGTGAAATCCAAAAATAAGGGGATAACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS CCA 90 bp | AAACCCCTCAGAAACAGAAAGCTCACCTTAAATGTGGTCTCTAACTaGCCTAATATCACCAACAAACATGGAACTGTGACTGATAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: KPLRNRKLTLNVVSN*PNITNKHGTVTDSK Trigger: TTTGCTATCAGTCACAGTTCCATGTTTGTTGGTGATATTAGGCCAGTTAGAGACCACATTTAAGGTGAGCTTTCTGTTTCTGAGGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS-3UTR CAA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACACTCTGCTGTTTGTGTaGTCGTTGATGGCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: ALGKSFNLSLKLFPTFINTLLFV*SLMALC Trigger: ACACAGAGCCATCAACGACAACACAAACAGCAGAGT...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS-3UTR CAA 90 bp | GCCTTGGGCAAATCATTTAATCTGTCTTTGAAGCTATTTCCCACATTCATAAACCTGTTTGTGTTGTCGTaGATGGCTCTGTGTATTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALGKSFNLSLKLFPTFINLFVLS*MALCIL Trigger: GAGAATACACAGAGCCATCAACGACAACACAAACAG...GTTTATGAATGTGGGAAATAGCTTCAAAGACAGATTAAATGATTTGCCCAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262225.8 |
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| CDS GCA 72 bp | GCTGTTTGTGTTGTCGTTGACTTCACCATCAGACACTaGTGCAAAGTGACGGCATTCACTTACTGGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: AVCVVVDFTIRH*CKVTAFTYWLC Trigger: ACAGAGCCAGTAAGTGAATGCCGTCACTTTGCAGCAGTGTCTGATGGTGAAGTCAACGACAACACAAACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543425.1 |
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| CDS TCA 72 bp | TTGTCGTTGACTTCACCATCAGACACTGCTGCAAAGTaGCGGCATTCACTTACTGGCTCTGTGTATTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSLTSPSDTAAK*RHSLTGSVYSL Trigger: GAGAGAATACACAGAGCCAGTAAGTGAATGCCGTCACTTTGCAGCAGTGTCTGATGGTGAAGTCAACGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543425.1 |
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| CDS GCA 72 bp | GTTTGTGTTGTCGTTGACTTCACCATCAGACACTGCTaGAAAGTGACGGCATTCACTTACTGGCTCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: VCVVVDFTIRHC*KVTAFTYWLCV Trigger: TACACAGAGCCAGTAAGTGAATGCCGTCACTTTGCAGCAGTGTCTGATGGTGAAGTCAACGACAACACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543425.1 |
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| CDS CAA 90 bp | AGTCTCTCCCTTCCGTTATCCCCTTATTTTTGGATTTCACTTGTATaGTGTAACTTGTGCCCAGCCCTACTGAGTACACTGTCAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: SLSLPLSPYFWISLV*CNLCPALLSTLSNG Trigger: TCCATTTGACAGTGTACTCAGTAGGGCTGGGCACAAGTTACACAATACAAGTGAAATCCAAAAATAAGGGGATAACGGAAGGGAGAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS CAA 72 bp | CTTCCGTTATCCCCTTATTTTTGGATTTCACTTGTATaGTGTAACTTGTGCCCAGCCCTACTGAGTACACTG | + |
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Preference number: 6 (lower is better) Translates to: LPLSPYFWISLV*CNLCPALLSTL Trigger: CAGTGTACTCAGTAGGGCTGGGCACAAGTTACACAATACAAGTGAAATCCAAAAATAAGGGGATAACGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS CAA 90 bp | CTTCCGTTATCCCCTTATTTTTGGATTTCACTTGTATTGTGTAACTaGTGCCCAGCCCTACTGAGTACACTGTCAAATGGAAACTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LPLSPYFWISLVLCN*CPALLSTLSNGNSL Trigger: TAAGGAGTTTCCATTTGACAGTGTACTCAGTAGGGCTGGGCACAAGTTACACAATACAAGTGAAATCCAAAAATAAGGGGATAACGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS GCA 72 bp | CCTTATTTTTGGATTTCACTTGTATTGTGTAACTTGTaGCCAGCCCTACTGAGTACACTGTCAAATGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: PYFWISLVLCNL*PALLSTLSNGN Trigger: GTTTCCATTTGACAGTGTACTCAGTAGGGCTGGGCACAAGTTACACAATACAAGTGAAATCCAAAAATAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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| CDS CCA 72 bp | AGAAACAGAAAGCTCACCTTAAATGTGGTCTCTAACTaGCCTAATATCACCAACAAACATGGAACTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: RNRKLTLNVVSN*PNITNKHGTVT Trigger: AGTCACAGTTCCATGTTTGTTGGTGATATTAGGCCAGTTAGAGACCACATTTAAGGTGAGCTTTCTGTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509052.2 |
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