RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMCO6 (Homo sapiens)

Ensembl gene IDs: ENSG00000113119

Ensembl transcript IDs: ENST00000252100.6, ENST00000394669.8, ENST00000394671.8, ENST00000504069.6, ENST00000505086.2, ENST00000509217.6, ENST00000509269.1, ENST00000509605.5, ENST00000510336.5, ENST00000511410.5, ENST00000513002.5, ENST00000514449.5, ENST00000515265.2, ENST00000515653.1

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCATGCAGGCACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTTaGTGGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCC +
Preference number: 1 (lower is better)
Translates to: AHAGTEPPQAAAGPG*WSGARPGSACCPPA
Trigger: GGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGTGCCTGCATGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CCA 90 bp CATGCAGGCACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCGGA +
Preference number: 1 (lower is better)
Translates to: HAGTEPPQAAAGPGC*SGARPGSACCPPAG
Trigger: TCCGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGTGCCTGCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR TCA 90 bp GAAGTGGCTGGCAGGCAGGCCTCAGCAACAGTGGACTGCTCGGAGTaGGAGAGCTCATGCAGGCACCGAGCCGCCTCAAGCTGCAGCAGG +
Preference number: 1 (lower is better)
Translates to: EVAGRQASATVDCSE*ESSCRHRAASSCSR
Trigger: CCTGCTGCAGCTTGAGGCGGCTCGGTGCCTGCATGAGCTCTCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCTGCCTGCCAGCCACTTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR TCA 90 bp TGGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCGGATaGAGGTTTGCTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGGC +
Preference number: 1 (lower is better)
Translates to: WSGARPGSACCPPAG*RFAVFQGAASLDEG
Trigger: GCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR GCA 90 bp AGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCGGATGAAGGTTTaGTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAGA +
Preference number: 1 (lower is better)
Translates to: SPTRVRMLPSSRMKV*CVSGCCKPRRRLTR
Trigger: TCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CCA 90 bp GTGATGGGGACGCTGGAGCAGCTATCCTTGCGGCTCACAAGAGGGTaGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAA +
Preference number: 1 (lower is better)
Translates to: VMGTLEQLSLRLTRG*GDDGCSHGCRHKGK
Trigger: TTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAGCGTCCCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CCA 90 bp CCAGTGTATACAGACACAGCTCCTGAGAACAGGCAACAAAAGCACTaGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGGAGATGGGG +
Preference number: 1 (lower is better)
Translates to: PVYTDTAPENRQQKH*AWPVSCQAACGEMG
Trigger: CCCCATCTCCCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTTCTCAGGAGCTGTGTCTGTATACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CCA 90 bp TGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGACCCAAAGGTCTTaGCTTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCC +
Preference number: 1 (lower is better)
Translates to: WIVLSGRGGAGTQRS*LRCGSREHETSLWS
Trigger: GGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAAGCCAAGACCTTTGGGTCCCAGCTCCTCCCCTTCCACTCAGCACTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
3UTR TCA 90 bp ACCTCAAAGAAAAGGACTCTATCCTTTCATCTTTGTGTACCTCAGTaGCCAGCACAGTGTCCTCGGTTTCCCCGAGGATCGCAGCCACAC +
Preference number: 1 (lower is better)
Translates to: TSKKRTLSFHLCVPQ*PAQCPRFPRGSQPH
Trigger: GTGTGGCTGCGATCCTCGGGGAAACCGAGGACACTGTGCTGGTCACTGAGGTACACAAAGATGAAAGGATAGAGTCCTTTTCTTTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR CAA 90 bp AGCTCATGCAGGCACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTaGCTGGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SSCRHRAASSCSRAW*LVRSPTRVRMLPSS
Trigger: GCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGTGCCTGCATGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CCA 90 bp CCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCCTCTCCAGCTTCCTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: PLSPAGLAAGTAAPSPASSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...GGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR-3UTR CCA 90 bp GGAGGTGATGGGGACGCTGGAGCAGCTATCCTTGCGGCTCACAAGAGGGTGGGGGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGG +
Preference number: 2 (lower is better)
Translates to: GGDGDAGAAILAAHKRVGAGPGC*SGARPG
Trigger: CCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGC...CCCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAGCGTCCCCATCACCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR GCA 90 bp AGAGCTCATGCAGGCACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTTGCTGGGCTTGCCGCAGGAACTaGTGCACCTCGGTTTCCCCG +
Preference number: 2 (lower is better)
Translates to: RAHAGTEPPQAAAGPGCWACRRN*CTSVSP
Trigger: CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGC...CCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGTGCCTGCATGAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CAA 90 bp GAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAG +
Preference number: 2 (lower is better)
Translates to: EPDQGPHAALQPDEG*LCFRVLQASTKADQ
Trigger: CTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR GCA 90 bp AACAGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 2 (lower is better)
Translates to: NRQQKHWAWPVSCQAACGVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...CCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR GCA 90 bp GTGGAGGCCAAGATGGAGGGAATGATCTTCTCTGGAGCTTCCTCAGCCTGTAGAGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 2 (lower is better)
Translates to: VEAKMEGMIFSGASSACRVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...TCTACAGGCTGAGGAAGCTCCAGAGAAGATCATTCCCTCCATCTTGGCCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504069.6
3UTR-3UTR CCA 90 bp AGAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAACATTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: RGWGDDGCSHGCRHKGKHSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...ATGTTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CCA 90 bp AGAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAACATAGCTGCAGCAGGGCCTaGTTGCTGGTCAGGAGCCCG +
Preference number: 2 (lower is better)
Translates to: RGWGDDGCSHGCRHKGKHSCSRA*LLVRSP
Trigger: CGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCT...ATGTTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCGGGACCCAAAGGTCTTaGCTTAGGTGTGGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSGTQRS*LRCGSR
Trigger: TCTGCTCCCACACCTAAGCCAAGACCTTTGGGTCCC...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
3UTR-3UTR CCA 90 bp GAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAACATGGAGGTAAGAAGTGGCTaGCAGGCAGGCCTCAGCAAC +
Preference number: 2 (lower is better)
Translates to: EGGEMMGVAMAVGIRANMEVRSG*QAGLSN
Trigger: GTTGCTGAGGCCTGCCTGCCAGCCACTTCTTACCTC...CATGTTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CCA 90 bp GAGGGAATGATCTTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCAGCACAGGGCAGAGGCTaGAGCTACCGGATGAAGGTT +
Preference number: 2 (lower is better)
Translates to: EGMIFSGASSACRSWDKAAQGRG*SYRMKV
Trigger: AACCTTCATCCGGTAGCTCCAGCCTCTGCCCTGTGC...TGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAAGATCATTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515653.1
3UTR-3UTR TCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGAGCAGAGAACATaGGACCTCATTATGGTCCTA +
Preference number: 2 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSWEQRT*DLIMVL
Trigger: TAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCA...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
3UTR-3UTR TCA 90 bp AGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGGAGGCTTACTATGAAGTCTaGGCTGTGACTGGAGAGGTA +
Preference number: 2 (lower is better)
Translates to: RQQKHWAWPVSCQAACGEAYYEV*AVTGEV
Trigger: TACCTCTCCAGTCACAGCTCAGACTTCATAGTAAGC...CTCCCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CAA 90 bp CCGGGCTGTGAGCACCTCAAAGAAAAGGACTCTATCCTTTCATCTTaGTGTACCTCAGTGACCAGCACAGTGTCCTCGGTTTCCCCGAGG +
Preference number: 2 (lower is better)
Translates to: PGCEHLKEKDSILSS*CTSVTSTVSSVSPR
Trigger: CCTCGGGGAAACCGAGGACACTGTGCTGGTCACTGAGGTACACAAAGATGAAAGGATAGAGTCCTTTTCTTTGAGGTGCTCACAGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR-3UTR CCA 90 bp AGAACAGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGCCTGCCAGCTCAAACTaGTCCCAAAAGCACAATTTT +
Preference number: 2 (lower is better)
Translates to: RTGNKSTGLGLFHARLRVPASSN*SQKHNF
Trigger: AAAATTGTGCTTTTGGGACCAGTTTGAGCTGGCAGG...CACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR GCA 72 bp GGCACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTTaGTGGTCAGGAGCCCGACCAGGGTCCGCATGCTGC +
Preference number: 3 (lower is better)
Translates to: GTEPPQAAAGPG*WSGARPGSACC
Trigger: GCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CCA 72 bp ACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: TEPPQAAAGPGC*SGARPGSACCP
Trigger: AGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CAA 90 bp CCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCCTCTCCAGCTTCCCACTCTCTTGTCCCCCGCTGGGCTaGCCGCAGGAACTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: PRWACRRNCCTLSSFPLSCPPLG*PQELLH
Trigger: GTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACA...AGAGAGTGGGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR TCA 72 bp GGCAGGCAGGCCTCAGCAACAGTGGACTGCTCGGAGTaGGAGAGCTCATGCAGGCACCGAGCCGCCTCAAGC +
Preference number: 3 (lower is better)
Translates to: GRQASATVDCSE*ESSCRHRAASS
Trigger: GCTTGAGGCGGCTCGGTGCCTGCATGAGCTCTCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCTGCCTGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR GCA 72 bp AGGGTCCGCATGCTGCCCTCCAGCCGGATGAAGGTTTaGTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGG +
Preference number: 3 (lower is better)
Translates to: RVRMLPSSRMKV*CVSGCCKPRRR
Trigger: CCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCAGCATGCGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR GCA 72 bp GGGGGACGGATGAAGGTTTGCTGTGTTTCAGGGTGCTaGAAGCCTCGACGAAGGCTGACCAGAGCCCCCTCT +
Preference number: 3 (lower is better)
Translates to: GGRMKVCCVSGC*KPRRRLTRAPS
Trigger: AGAGGGGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504069.6
3UTR GCA 72 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTaGTGCACCCTCTCCAGCTTCCCACTCTCTTCAGGT +
Preference number: 3 (lower is better)
Translates to: FSSVPRWACRRN*CTLSSFPLSSG
Trigger: ACCTGAAGAGAGTGGGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR CCA 72 bp GGTAAGAAGTGGCTGGCAGGCAGGCCTCAGCAACAGTaGACTGCTCGGAGTGAGAGAGCTCATGCAGGCACC +
Preference number: 3 (lower is better)
Translates to: GKKWLAGRPQQQ*TARSERAHAGT
Trigger: GGTGCCTGCATGAGCTCTCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCTGCCTGCCAGCCACTTCTTACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR TCA 72 bp GCTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGGCTaGCCAGAGCCCCCTCTCTCTCCTTTTCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: AVFQGAASLDEG*PEPPLSPFPLS
Trigger: GGACAGAGGAAAAGGAGAGAGAGGGGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
3UTR-3UTR CAA 90 bp CCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCCTCTCCAGCTTCCTCTATCCTTTCATCTTaGTGTACCTCAGTGACCAGC +
Preference number: 3 (lower is better)
Translates to: PLSPAGLAAGTAAPSPASSILSS*CTSVTS
Trigger: GCTGGTCACTGAGGTACACAAAGATGAAAGGATAGA...GGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR CCA 72 bp ACAGCTCCTGAGAACAGGCAACAAAAGCACTGGGCTTaGCCTGTTTCATGCCAGGCTGCGTGTGGGGAGATG +
Preference number: 3 (lower is better)
Translates to: TAPENRQQKHWA*PVSCQAACGEM
Trigger: CATCTCCCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTTCTCAGGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CCA 72 bp ACAGACACAGCTCCTGAGAACAGGCAACAAAAGCACTaGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGG +
Preference number: 3 (lower is better)
Translates to: TDTAPENRQQKH*AWPVSCQAACG
Trigger: CCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTTCTCAGGAGCTGTGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CAA 90 bp GAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAACATGCAGCCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: EGGEMMGVAMAVGIRANMQPDEG*LCFRVL
Trigger: CAGCACCCTGAAACACAGCAAACCTTCATCCGGCTG...CATGTTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR-3UTR CAA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGACTGGACAAACAAGCTaGATGTTAAGAGAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWTGQTS*MLRERG
Trigger: TCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGT...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
3UTR TCA 72 bp AAAAGGACTCTATCCTTTCATCTTTGTGTACCTCAGTaGCCAGCACAGTGTCCTCGGTTTCCCCGAGGATCG +
Preference number: 3 (lower is better)
Translates to: KRTLSFHLCVPQ*PAQCPRFPRGS
Trigger: CGATCCTCGGGGAAACCGAGGACACTGTGCTGGTCACTGAGGTACACAAAGATGAAAGGATAGAGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR TCA 72 bp CCTTCCCTTGTGACATCTGTCTTCTTCACCGGGCTGTaGGCACCTCAAAGAAAAGGACTCTATCCTTTCATC +
Preference number: 3 (lower is better)
Translates to: PSLVTSVFFTGL*APQRKGLYPFI
Trigger: GATGAAAGGATAGAGTCCTTTTCTTTGAGGTGCTCACAGCCCGGTGAAGAAGACAGATGTCACAAGGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509217.6
3UTR CCA 72 bp GACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTaGACAAACAAGCTTGATGTTAAGAGAGAGGGGAAT +
Preference number: 3 (lower is better)
Translates to: DLIMVLNLQRLY*TNKLDVKREGN
Trigger: ATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp CTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCGAGGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: LCPPLGLPQELLHLGFPEGLRRP*RRLHMV
Trigger: CACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCC...CTCGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp GTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCGAGGATCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: VPRWACRRNCCTSVSPRILLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...GATCCTCGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp CCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCCTCTCCAGCTTCCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: PLSPAGLAAGTAAPSPASLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...GGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR GCA 90 bp TCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAGAGCCCCCTCTCTCTCCTTTGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: SGCCKPRRRLTRAPSLSFGLRRP*RRLHMV
Trigger: CACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCC...AAAGGAGAGAGAGGGGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp CTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LGFPEDRSHTSLSSFLWGLLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...GCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS-3UTR GCA 90 bp TTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: FLCPPLGLPQELLHLGFPLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...GGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: FSSVPRWACRRNCCTSVSVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...GGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp GGAACTGCTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GTAAPRFPRGSQPHIPLQVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...CTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAGCAGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp CTTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LFLCPPLGLPQELLHLGFVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...GAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp CTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCGAGGTCGGCTCCACATGGTaGAGCAGGAGGAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LCPPLGLPQELLHLGFPEVGSTW*SRRRKA
Trigger: GGCTTTCCTCCTCCTGCTCCACCATGTGGAGCCGAC...CTCGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp CCGCTGGGCTTGCCGCAGGAACTGCTGCACCCTCTCCAGCTTCCCACTCTCTTCTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PLGLPQELLHPLQLPTLFSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...GAAGAGAGTGGGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR GCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSGLRRP*RRLHMV
Trigger: CACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCC...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: FSSVPRWACRRNCCTSVSLLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...GGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp TCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCGTCGTTTTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: SPRIAATHPSPASSGASFSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...AAACGACGCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS-3UTR CCA 90 bp TTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCGTCGTTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FPRGSQPHIPLQLPLGRRSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...ACGACGCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS-3UTR GCA 90 bp TGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CTSVSPRIAATHPSPASSLLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...AGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp CAGGAACTGCTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QELLHLGFPEDRSHTSLSLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...GGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAGCAGTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp CTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHLGFPEDRSHTSLSSFLLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...GAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp CTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCGCCGTCGGCTCCACATaGTGGAGCAGGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGFPEDRSHTSLSSFLWGAVGST*WSRRRK
Trigger: TTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGC...GCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS-3UTR GCA 90 bp CTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: LELPQPVEAGTRHIRELPGLRRP*RRLHMV
Trigger: CACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCC...TGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR GCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWLLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGCTTGCCGCAGGAACTaGTGCACCTCGGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: CTSVSPRIAATHPSPASSACRRN*CTSVSP
Trigger: CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGC...AGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR GCA 90 bp TCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGCACAGCCGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: SSACRSWDKAYPRASSTAVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...GGCTGTGCTGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR GCA 90 bp AGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGGAGCGAGCCGCCTCAAGCTaGAGCAGGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RQQKHWAWPVSCQAACGERAASS*SRAWLL
Trigger: CAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCG...CTCCCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR GCA 90 bp TTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCGTCGTGCTTGCCGCAGGAACTaGTGCACCCTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FPRGSQPHIPLQLPLGRRACRRN*CTLSSF
Trigger: GAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCAAGC...ACGACGCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR CCA 90 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCGCCGTCGGCTCCACATaGTGGAGCAGGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FSSVPRWACRRNCCTSVSAVGST*WSRRRK
Trigger: TTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGC...GGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp AGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGGAGAGCTGCAGCAGGGCCTaGTTGCTGGTCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RQQKHWAWPVSCQAACGESCSRA*LLVRSP
Trigger: CGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCT...CTCCCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp TTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCTGTGCTGAGGGAGAGTaGAGGCCAAGATGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FLCPPLGLPQELLHLGFPCAEGE*RPRWRE
Trigger: TTCCCTCCATCTTGGCCTCCACTCTCCCTCAGCACA...GGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR TCA 90 bp GGAGGTGATGGGGACGCTGGAGCAGCTATCCTTGCGGCTCACAAGAGGGTGGGGTGCCCTCCAGCCGGATaGAGGTTTGCTGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GGDGDAGAAILAAHKRVGCPPAG*RFAVFQ
Trigger: CTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCA...CCCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAGCGTCCCCATCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR TCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCAGGGCTTGCAGCCCTaGCTGCTGCAGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWQGLQP*LLQEDL
Trigger: CAGGTCTTCCTGCAGCAGTCAGGGCTGCAAGCCCTG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp CTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCCTTTGTGTACCTCAGTaGCCAGCACAGTGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGFPEDRSHTSLSSFLWGLCVPQ*PAQCPR
Trigger: CCGAGGACACTGTGCTGGTCACTGAGGTACACAAAG...GCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR GCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GAACAGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGCAGCAGGGCCTGGTTaGTGGTCAGGAGCCCGACCA +
Preference number: 4 (lower is better)
Translates to: EQATKALGLACFMPGCVWAAGPG*WSGARP
Trigger: TGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGC...CCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR GCA 90 bp GTGTCCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTTGCCGCAGGAACTGCTaGACCCTCTCCAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSSVSPRIAATHPSPASSCRRNC*TLSSFP
Trigger: TGGGAAGCTGGAGAGGGTGCAGCAGTTCCTGCGGCA...AGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR CCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGGTCGGCTCCACATGGTaGAGCAGGAGGAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGVGSTW*SRRRKA
Trigger: GGCTTTCCTCCTCCTGCTCCACCATGTGGAGCCGAC...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSSVPRWACRRNCCTSVSLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...GGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp CAGCAACAGTGGACTGCTCGGAGTGAGAGAGCTCATGCAGGCACCGAGCCGCCTCGGCTCACAAGAGGGTaGGGAGATGATGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QQQWTARSERAHAGTEPPRLTRG*GDDGCS
Trigger: GCTACACCCATCATCTCCCCACCCTCTTGTGAGCCG...AGGCGGCTCGGTGCCTGCATGAGCTCTCTCACTCCGAGCAGTCCACTGTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
3UTR CAA 72 bp CAGGGTCCGCATGCTGCCCTCCAGCCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAG +
Preference number: 4 (lower is better)
Translates to: QGPHAALQPDEG*LCFRVLQASTK
Trigger: CTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCAGCATGCGGACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR TCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGTGGACTGCTCGGAGTaGGAGAGCTCATGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWVDCSE*ESSCRH
Trigger: GTGCCTGCATGAGCTCTCTCACTCCGAGCAGTCCAC...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp TCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGCACAGCCCAGCGACCCCAGGGTTaGGCTTTGGGCCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: SSACRSWDKAYPRASSTAQRPQG*ALGQVA
Trigger: TGCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTG...GGCTGTGCTGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR TCA 90 bp TCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCGGCTTACTATGAAGTCTaGGCTGTGACTGGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSVPRWACRRNCCTSVSPAYYEV*AVTGEV
Trigger: TACCTCTCCAGTCACAGCTCAGACTTCATAGTAAGC...CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR GCA 90 bp GCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGCACATTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ASSACRSWDKAYPRASSTLLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...TGTGCTGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCGCCGTCGGCTCCACATaGTGGAGCAGGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSAVGST*WSRRRK
Trigger: TTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGC...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CTSVSPRIAATHPSPASSLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...AGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS-3UTR CCA 90 bp ACAAGAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAAGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGG +
Preference number: 4 (lower is better)
Translates to: TRGWGDDGCSHGCRHKGKAGPGC*SGARPG
Trigger: CCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGC...TTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp CTGCTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCAGGCCTCAGCAACAGTaGACTGCTCGGAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLHLGFPEDRSHTSLSSFRPQQQ*TARSER
Trigger: TCTCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCT...GAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGTCCAGCACAGCCACATaGGGGGACTGGATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWSSTAT*GDWMQA
Trigger: TGCCTGCATCCAGTCCCCCCATGTGGCTGTGCTGGA...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp CTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCCCCAGGGTTGAGCTTTaGGCCAGGTTGCAACATTTG +
Preference number: 4 (lower is better)
Translates to: LGFPEDRSHTSLSSFLWGPRVEL*ARLQHL
Trigger: CAAATGTTGCAACCTGGCCCAAAGCTCAACCCTGGG...GCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR CCA 90 bp GGAGGTGATGGGGACGCTGGAGCAGCTATCCTTGCGGCTCACAAGAGGGTGGGGCAAAAGCACTGGGCTTaGCCTGTTTCATGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGDGDAGAAILAAHKRVGQKHWA*PVSCQA
Trigger: AGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTG...CCCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAGCGTCCCCATCACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR TCA 90 bp CTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCGGACAGGGCTTACTATaGAGTCTGAGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LHLGFPEDRSHTSLSSFLGQGLL*SLSCDW
Trigger: CCAGTCACAGCTCAGACTTCATAGTAAGCCCTGTCC...GAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR GCA 90 bp GCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGCACAGCTTGCCGCAGGAACTaGTGCACCTCGGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: ASSACRSWDKAYPRASSTACRRN*CTSVSP
Trigger: CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGC...TGTGCTGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR GCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGCCCTTTTGGTCCTCCTaGCTGGATAGTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGPFWSS*LDSAEW
Trigger: CCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGG...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp ATGGGGACGCTGGAGCAGCTATCCTTGCGGCTCACAAGAGGGTGGGGAGATGATTGGAGCAGCTATCCTTaGGGCTCACAAGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: MGTLEQLSLRLTRGWGDDWSSYP*GSQEGG
Trigger: CCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCA...ATCATCTCCCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAGCGTCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp CAGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCAGGCTGCGTGTGGGGACTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QATKALGLACFMPGCVWGLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...TCCCCACACGCAGCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp TTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FSGASSACRSWDKAYPRASSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...AGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR CCA 90 bp GGTAAGGATCTGACTGGAAGCTGGGTCATCAGGTCTTCAGAGACTTTCAGCCCCTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GKDLTGSWVIRSSETFSPSSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...GGGGCTGAAAGTCTCTGAAGACCTGATGACCCAGCTTCCAGTCAGATCCTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR CCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGAGGCCTCAGCAACAGTaGACTGCTCGGAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGRPQQQ*TARSER
Trigger: TCTCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCT...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCGAGGTAAGAAGTGGCTaGCAGGCAGGCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSEVRSG*QAGLSN
Trigger: GTTGCTGAGGCCTGCCTGCCAGCCACTTCTTACCTC...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTAAGAAGTGGCTGGCAGGCAGGCCTCAGCAACAGTGGACTGCTCGGAGTGAGAGAGGTAAGAAGTGGCTaGCAGGCAGGCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VRSGWQAGLSNSGLLGVREVRSG*QAGLSN
Trigger: GTTGCTGAGGCCTGCCTGCCAGCCACTTCTTACCTC...TCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCTGCCTGCCAGCCACTTCTTAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGTGTGCTGAGGGAGAGTaGAGGCCAAGATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWCAEGE*RPRWSC
Trigger: GCAGCTCCATCTTGGCCTCCACTCTCCCTCAGCACA...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252100.6
CDS-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGAAGGGGAGGAGCTaGGACCCAAAGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSWKGRS*DPKVLA
Trigger: AGCCAAGACCTTTGGGTCCCAGCTCCTCCCCTTCCA...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GGAGGTGATGGGGACGCTGGAGCAGCTATCCTTGCGGCTCACAAGAGGGTGGGGAGGCAACAAAAGCACTaGGCTTGGCCTGTTTCATGC +
Preference number: 4 (lower is better)
Translates to: GGDGDAGAAILAAHKRVGRQQKH*AWPVSC
Trigger: GCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCT...CCCCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAGCGTCCCCATCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR TCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGTGCCCTCCAGCCGGATaGAGGTTTGCTGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWCPPAG*RFAVFQ
Trigger: CTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCA...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGCAGAAGCAGGGGGAATaGTCTTCTCTGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGQKQGE*SSLELP
Trigger: AGGAAGCTCCAGAGAAGATCATTCCCCCTGCTTCTG...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252100.6
CDS-3UTR TCA 90 bp TGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTATTTGTAGCATGTGCTaGGGGAGAGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CTSVSPRIAATHPSPASSICSMC*GRVEAK
Trigger: CTTGGCCTCCACTCTCCCTCAGCACATGCTACAAAT...AGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR TCA 90 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTGCACCTCGGTTTCCCCAAGATGGAGGGAATaGTCTTCTCTGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FSSVPRWACRRNCCTSVSPRWRE*SSLELP
Trigger: AGGAAGCTCCAGAGAAGATCATTCCCTCCATCTTGG...GGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR GCA 90 bp GGTAAGGATCTGACTGGAAGCTGGGTCATCAGGTCTTCAGAGACTTTCAGCCCCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GKDLTGSWVIRSSETFSPLLLTS*CSLRAF
Trigger: GAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAG...GGGGCTGAAAGTCTCTGAAGACCTGATGACCCAGCTTCCAGTCAGATCCTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR GCA 90 bp ACAAGAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAAGCTTGCCGCAGGAACTaGTGCACCTCGGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: TRGWGDDGCSHGCRHKGKACRRN*CTSVSP
Trigger: CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGC...TTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR GCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCAGCAGCTCCAGTCCTaGATCCTCGGTTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWQQLQS*ILGFLD
Trigger: GTCCAGAAAACCGAGGATGCAGGACTGGAGCTGCTG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGTCTCTGAGCTGCATTTaGCCTCCCACAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGSLSCI*PPTVST
Trigger: AGTGGAGACTGTGGGAGGGCAAATGCAGCTCAGAGA...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCCGCTCATCTCTGAGCTaGATTTGCCCTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSRSSLS*ICPPTV
Trigger: GACTGTGGGAGGGCAAATGCAGCTCAGAGATGAGCG...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCGCTCATCTCTGAGCTaGATTTGCCCTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWRSSLS*ICPPTV
Trigger: GACTGTGGGAGGGCAAATGCAGCTCAGAGATGAGCG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp CTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGGAACTGCTGCACCTTaGCCCCTCACCTCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LELPQPVEAGTRHIRELPGTAAP*PLTSVS
Trigger: GGAAACCGAGGTGAGGGGGCAAGGTGCAGCAGTTCC...TGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR GCA 90 bp TTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTGCTTGCCGCAGGAACTaGTGCACCTTGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: FSGASSACRSWDKAYPRAACRRN*CTLPPH
Trigger: GTGAGGGGGCAAGGTGCAGCAGTTCCTGCGGCAAGC...AGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCAGGCCTCAGCAACAGTaGACTGCTCGGAGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSRPQQQ*TARSER
Trigger: TCTCTCACTCCGAGCAGTCCACTGTTGCTGAGGCCT...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp CTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTCAGCCTGTAGAAGCTaGGACAAGGCATATCCGAGA +
Preference number: 4 (lower is better)
Translates to: LHLGFPEDRSHTSLSSFLSACRS*DKAYPR
Trigger: TCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGA...GAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS-3UTR GCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp AAGGACTCTATCCTTTCATCTTTGTGTACCTCAGTGACCAGCACAGTGTCCTCGGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: KDSILSSLCTSVTSTVSSVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...CGAGGACACTGTGCTGGTCACTGAGGTACACAAAGATGAAAGGATAGAGTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR GCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGTCTCTGAGCTGCATTTaGCCTCCCACAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWSLSCI*PPTVST
Trigger: AGTGGAGACTGTGGGAGGGCAAATGCAGCTCAGAGA...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp ACAAGAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAAGTCGGCTCCACATGGTaGAGCAGGAGGAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TRGWGDDGCSHGCRHKGKVGSTW*SRRRKA
Trigger: GGCTTTCCTCCTCCTGCTCCACCATGTGGAGCCGAC...TTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CCA 90 bp TTGGGCCAGGTTGCAACATTTGTAGCATGTGCTGAGGGAGAGTGGAGGCCAAGAGCCGTCGGCTCCACATaGTGGAGCAGGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LGQVATFVACAEGEWRPRAVGST*WSRRRK
Trigger: TTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGC...TCTTGGCCTCCACTCTCCCTCAGCACATGCTACAAATGTTGCAACCTGGCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR CCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTTTGGTCCTCCTGCCTaGATAGTGCTGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSFGPPA*IVLSGR
Trigger: CCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAA...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCAGCTCTATGAAGTCTaGGCTGTGACTGGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWQLYEV*AVTGEV
Trigger: TACCTCTCCAGTCACAGCTCAGACTTCATAGAGCTG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGACAGACACAGCTCTATaGAGTCTGAGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWTDTAL*SLSCDW
Trigger: CCAGTCACAGCTCAGACTTCATAGAGCTGTGTCTGT...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTGCAGCAGGGCCTGGTTaGTGGTCAGGAGCCCGACCA +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAAAGPG*WSGARP
Trigger: TGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGC...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTACAGGAACAGCAGATaGAGCAGCTCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSYRNSR*SSSKLW
Trigger: CCAGAGTTTGGAGCTGCTGCATCTGCTGTTCCTGTA...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp ATGATCTTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGGTCGGCTCCACATGGTaGAGCAGGAGGAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: MIFSGASSACRSWDKAYPVGSTW*SRRRKA
Trigger: GGCTTTCCTCCTCCTGCTCCACCATGTGGAGCCGAC...CGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAAGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR CCA 90 bp GGTAAGGATCTGACTGGAAGCTGGGTCATCAGGTCTTCAGAGACTTTCAGCCCCCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GKDLTGSWVIRSSETFSPLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...GGGGCTGAAAGTCTCTGAAGACCTGATGACCCAGCTTCCAGTCAGATCCTTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR CCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTTCCTCTGTCCCCCGCTaGGCTTGCCGCAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKASSVPR*ACRRNC
Trigger: GCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGG +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDAGPGC*SGARPG
Trigger: CCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGC...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGTCAGCCTGTAGAAGCTaGGACAAGGCATATCCGAGA +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWSACRS*DKAYPR
Trigger: TCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGA...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGGAGCAGCTCCAAACTCTaGCCTACTACTTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: VPFGPPAWIVLSGRGGAGSSSKL*PTTSVS
Trigger: TGACACTGAAGTAGTAGGCCAGAGTTTGGAGCTGCT...CCCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GCCAAGATGGAGGGAATGATCTTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGCACAGGGCAGAGGCTaGAGCTACCGGATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AKMEGMIFSGASSACRSWAQGRG*SYRMKV
Trigger: AACCTTCATCCGGTAGCTCCAGCCTCTGCCCTGTGC...CCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAAGATCATTCCCTCCATCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR TCA 90 bp CTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGCACAGATTTGTAGCATGTGCTaGGGGAGAGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LPQPVEAGTRHIRELPAQICSMC*GRVEAK
Trigger: CTTGGCCTCCACTCTCCCTCAGCACATGCTACAAAT...CTGTGCTGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR TCA 90 bp TCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGCACAGCCCCAAGATGGAGGGAATaGTCTTCTCTGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSACRSWDKAYPRASSTAPRWRE*SSLELP
Trigger: AGGAAGCTCCAGAGAAGATCATTCCCTCCATCTTGG...GGCTGTGCTGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR GCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTG +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEGLRRP*RRLHMV
Trigger: CACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACGAGCCGCCTCAAGCTaGAGCAGGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALRAASS*SRAWLL
Trigger: CAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCG...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAAGCTGCAGCAGGGCCTaGTTGCTGGTCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALSCSRA*LLVRSP
Trigger: CGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCT...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTGTGCTGAGGGAGAGTaGAGGCCAAGATGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FSGASSACRSWDKAYPRACAEGE*RPRWRE
Trigger: TTCCCTCCATCTTGGCCTCCACTCTCCCTCAGCACA...AGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR CCA 90 bp TCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAGAGCCCCCTCTCTCTCCTTTCCTGCCAGCTCAAACTaGTCCCAAAAGCACAATTTT +
Preference number: 4 (lower is better)
Translates to: SGCCKPRRRLTRAPSLSFPASSN*SQKHNF
Trigger: AAAATTGTGCTTTTGGGACCAGTTTGAGCTGGCAGG...AAAGGAGAGAGAGGGGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR TCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACAGCGACCCCAGGGTTaGGCTTTGGGCCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALQRPQG*ALGQVA
Trigger: TGCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTG...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACAGGGCTTGCAGCCCTaGCTGCTGCAGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALQGLQP*LLQEDL
Trigger: CAGGTCTTCCTGCAGCAGTCAGGGCTGCAAGCCCTG...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GAGGGAATGATCTTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCAGACAGGGTAAGGATCTaGCTGGAAGCTGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: EGMIFSGASSACRSWDKADRVRI*LEAGSS
Trigger: TGATGACCCAGCTTCCAGTCAGATCCTTACCCTGTC...TGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAAGATCATTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR GCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDLLTSC*SLRAFR
Trigger: GCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAA...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAGCTTGCCGCAGGAACTaGTGCACCTCGGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALACRRN*CTSVSP
Trigger: CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGC...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGTCCCCCGCTGGGCTTaGCGCAGGAACTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEVPRWA*RRNCCT
Trigger: GGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGAC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCAGCAGGGCCTGGTTaGTGGTCAGGAGCCCGACCA +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKAAGPG*WSGARP
Trigger: TGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGC...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACCGAGCCGCCTCAAGCTaGAGCAGGGCCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDRAASS*SRAWLL
Trigger: CAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCG...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCCCTGTGGCAGGAGCTaGCTTCTCACAGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAPCGRS*LLTASL
Trigger: GAGTGAGGCTGTGAGAAGGCAGCTCCTGCCACAGGG...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGAGCAGGACCCTTTTCTaGAACATTGCACAGAACTGT +
Preference number: 4 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWSRTLF*NIAQNC
Trigger: ACAGTTCTGTGCAATGTTGCAGAAAAGGGTCCTGCT...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAAGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGG +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKAGPGC*SGARPG
Trigger: CCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGC...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGAGCTGCAGCAGGGCCTaGTTGCTGGTCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKSCSRA*LLVRSP
Trigger: CGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCT...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp CTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAGATCTGACTGGAAGCTaGGTCATCAGGTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LELPQPVEAGTRHIRELPDLTGS*VIRSSE
Trigger: CTCTGAAGACCTGATGACCCAGCTTCCAGTCAGATC...TGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR TCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACCAGCGACCCCAGGGTTaGGCTTTGGGCCAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDQRPQG*ALGQVA
Trigger: TGCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTG...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAGCCGTCGGCTCCACATaGTGGAGCAGGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALAVGST*WSRRRK
Trigger: TTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGC...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TCTTCTTCACCGGGCTGTGAGCACCTCAAAGAAAAGGACTCTATCCTTTCATCTGCCGTCGGCTCCACATaGTGGAGCAGGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSSPGCEHLKEKDSILSSAVGST*WSRRRK
Trigger: TTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGC...AGATGAAAGGATAGAGTCCTTTTCTTTGAGGTGCTCACAGCCCGGTGAAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR CCA 90 bp AAGGACTCTATCCTTTCATCTTTGTGTACCTCAGTGACCAGCACAGTGTCCTCGCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KDSILSSLCTSVTSTVSSLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...CGAGGACACTGTGCTGGTCACTGAGGTACACAAAGATGAAAGGATAGAGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR CCA 90 bp TTGGGCCAGGTTGCAACATTTGTAGCATGTGCTGAGGGAGAGTGGAGGCCAAGATCAGCCTGTAGAAGCTaGGACAAGGCATATCCGAGA +
Preference number: 4 (lower is better)
Translates to: LGQVATFVACAEGEWRPRSACRS*DKAYPR
Trigger: TCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGA...TCTTGGCCTCCACTCTCCCTCAGCACATGCTACAAATGTTGCAACCTGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR TCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGTGGACTGCTCGGAGTaGGAGAGCTCATGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKVDCSE*ESSCRH
Trigger: GTGCCTGCATGAGCTCTCTCACTCCGAGCAGTCCAC...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGCTTGCCGCAGGAACTaGTGCACCTCGGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEACRRN*CTSVSP
Trigger: CGGGGAAACCGAGGTGCAGCAGTTCCTGCGGCAAGC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGTCGGCTCCACATGGTaGAGCAGGAGGAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKVGSTW*SRRRKA
Trigger: GGCTTTCCTCCTCCTGCTCCACCATGTGGAGCCGAC...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGTCCAGCACAGCCACATaGGGGGACTGGATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKSSTAT*GDWMQA
Trigger: TGCCTGCATCCAGTCCCCCCATGTGGCTGTGCTGGA...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAGCATCCTCGGTTTTCTaGACAGCCCCAGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALASSVF*TAPAKS
Trigger: GGACTTGGCTGGGGCTGTCCAGAAAACCGAGGATGC...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTATTTGTAGCATGTGCTaGGGGAGAGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAICSMC*GRVEAK
Trigger: CTTGGCCTCCACTCTCCCTCAGCACATGCTACAAAT...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGCCCTGTGGCAGGAGCTaGCTTCTCACAGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEPCGRS*LLTASL
Trigger: GAGTGAGGCTGTGAGAAGGCAGCTCCTGCCACAGGG...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACGAAAAGGCTAGTGTGTaGAGCAAGGCGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDEKASV*SKAGSR
Trigger: CCTGCTTCCCGCCTTGCTGCACACACTAGCCTTTTC...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDLSSFL*GVVSQQ
Trigger: CTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAG...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACTGGAAGGGGAGGAGCTaGGACCCAAAGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDWKGRS*DPKVLA
Trigger: AGCCAAGACCTTTGGGTCCCAGCTCCTCCCCTTCCA...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGTGCCCTCCAGCCGGATaGAGGTTTGCTGTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKCPPAG*RFAVFQ
Trigger: CTGAAACACAGCAAACCTTCATCCGGCTGGAGGGCA...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTACAGACACAGCTCTATaGAGTCTGAGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKATDTAL*SLSCDW
Trigger: CCAGTCACAGCTCAGACTTCATAGAGCTGTGTCTGT...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAATTTGTAGCATGTGCTaGGGGAGAGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALICSMC*GRVEAK
Trigger: CTTGGCCTCCACTCTCCCTCAGCACATGCTACAAAT...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTAAAGCTACCAGCTGCTaGAGCAAACATGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAKATSC*SKHEGW
Trigger: CCACCCTTCATGTTTGCTTCAGCAGCTGGTAGCTTT...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCCAAGATGGAGGGAATaGTCTTCTCTGGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAPRWRE*SSLELP
Trigger: AGGAAGCTCCAGAGAAGATCATTCCCTCCATCTTGG...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394671.8
CDS-3UTR GCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACCAGCAGCTCCAGTCCTaGATCCTCGGTTTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDQQLQS*ILGFLD
Trigger: GTCCAGAAAACCGAGGATGCAGGACTGGAGCTGCTG...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGAGGTAAGAAGTGGCTaGCAGGCAGGCCTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEEVRSG*QAGLSN
Trigger: GTTGCTGAGGCCTGCCTGCCAGCCACTTCTTACCTC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACCCAGGGTTGAGCTTTaGGCCAGGTTGCAACATTTG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALPRVEL*ARLQHL
Trigger: CAAATGTTGCAACCTGGCCCAAAGCTCAACCCTGGG...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGCATCCTCGGTTTTCTaGACAGCCCCAGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEASSVF*TAPAKS
Trigger: GGACTTGGCTGGGGCTGTCCAGAAAACCGAGGATGC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACGGGACCCAAAGGTCTTaGCTTAGGTGTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDGTQRS*LRCGSR
Trigger: TCTGCTCCCACACCTAAGCCAAGACCTTTGGGTCCC...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACCAGCTCTATGAAGTCTaGGCTGTGACTGGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDQLYEV*AVTGEV
Trigger: TACCTCTCCAGTCACAGCTCAGACTTCATAGAGCTG...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTTGGGAGCAGAGAACATaGGACCTCATTATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAWEQRT*DLIMVL
Trigger: TAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCA...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACGTAAGTAGACCACACTaGGTCCCTTTTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDVSRPH*VPFGPP
Trigger: AGGAGGACCAAAAGGGACTCAGTGTGGTCTACTTAC...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGAAAAGGCTAGTGTGTaGAGCAAGGCGGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEEKASV*SKAGSR
Trigger: CCTGCTTCCCGCCTTGCTGCACACACTAGCCTTTTC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACTACAGGAACAGCAGATaGAGCAGCTCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDYRNSR*SSSKLW
Trigger: CCAGAGTTTGGAGCTGCTGCATCTGCTGTTCCTGTA...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGACCTGAACAGCCTCTaGCTGATACAGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKDLNSL*LIQEQQ
Trigger: CTGCTGTTCCTGTATCAGCCAGAGGCTGTTCAGGTC...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGGGACCCAAAGGTCTTaGCTTAGGTGTGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEGTQRS*LRCGSR
Trigger: TCTGCTCCCACACCTAAGCCAAGACCTTTGGGTCCC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAATGTGCTGAGGGAGAGTaGAGGCCAAGATGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKCAEGE*RPRWRE
Trigger: TTCCCTCCATCTTGGCCTCCACTCTCCCTCAGCACA...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394671.8
CDS-3UTR TCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAACAAGATCACCCTTaGAGAGCTGTCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDKQDHP*RAVCWR
Trigger: TCTCCAGCAGACAGCTCTTCAAGGGTGATCTTGTTT...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACGTAAGTAGACCACACTaGGTCCCTTTTGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDVSRPH*VPFGPP
Trigger: AGGAGGACCAAAAGGGACTCAGTGTGGTCTACTTAC...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGAAAGCTACCAGCTGCTaGAGCAAACATGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKKATSC*SKHEGW
Trigger: CCACCCTTCATGTTTGCTTCAGCAGCTGGTAGCTTT...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACTCAGCCTGTAGAAGCTaGGACAAGGCATATCCGAGA +
Preference number: 4 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDSACRS*DKAYPR
Trigger: TCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGA...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAACCCAGGGTTGAGCTTTaGGCCAGGTTGCAACATTTG +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKPRVEL*ARLQHL
Trigger: CAAATGTTGCAACCTGGCCCAAAGCTCAACCCTGGG...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAGCAGCTCCAAACTCTaGCCTACTACTTCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: AENMRPHYGPKSPKALLDSSSKL*PTTSVS
Trigger: TGACACTGAAGTAGTAGGCCAGAGTTTGGAGCTGCT...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAAGACCTGAACAGCCTCTaGCTGATACAGGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKDLNSL*LIQEQQ
Trigger: CTGCTGTTCCTGTATCAGCCAGAGGCTGTTCAGGTC...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGTTTGGTCCTCCTGCCTaGATAGTGCTGAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEFGPPA*IVLSGR
Trigger: CCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAA...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
3UTR CAA 72 bp GAGCACCTCAAAGAAAAGGACTCTATCCTTTCATCTTaGTGTACCTCAGTGACCAGCACAGTGTCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: EHLKEKDSILSS*CTSVTSTVSSV
Trigger: AACCGAGGACACTGTGCTGGTCACTGAGGTACACAAAGATGAAAGGATAGAGTCCTTTTCTTTGAGGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS-3UTR TCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGTGGGAGCAGAGAACATaGGACCTCATTATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKWEQRT*DLIMVL
Trigger: TAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCA...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAAGACTGGGCTGTTTCTaGAAAAAGAACTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALRLGCF*KKNCRR
Trigger: CCTTCTGCAGTTCTTTTTCCAGAAACAGCCCAGTCT...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR TCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAAAAACAAGATCACCCTTaGAGAGCTGTCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKKQDHP*RAVCWR
Trigger: TCTCCAGCAGACAGCTCTTCAAGGGTGATCTTGTTT...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGAAACTAGGACTGTTTaGAGTGAGGTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKETRTV*SEVVEE
Trigger: CTCCTCAACAACCTCACTGCAAACAGTCCTAGTTTC...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp TTAGGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGAGACTGGGCTGTTTCTaGAAAAAGAACTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LGVGAENMRPHYGPKSPKRLGCF*KKNCRR
Trigger: CCTTCTGCAGTTCTTTTTCCAGAAACAGCCCAGTCT...CTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTCCAAAGGCTCTACTaGACAAACAAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: VGAENMRPHYGPKSPKALLQRLY*TNKLDV
Trigger: AACATCAAGCTTGTTTGTCCAGTAGAGCCTTTGGAG...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGAAACTAGGACTGTTTaGAGTGAGGTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: STGQTSLMLRERGMSDIEETRTV*SEVVEE
Trigger: CTCCTCAACAACCTCACTGCAAACAGTCCTAGTTTC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR GCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAAAGCAGGACCCTTTTCTaGAACATTGCACAGAACTGT +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKSRTLF*NIAQNC
Trigger: ACAGTTCTGTGCAATGTTGCAGAAAAGGGTCCTGCT...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CCA 90 bp GAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACAAACTCCAAAGGCTCTACTaGACAAACAAGCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: ENMRPHYGPKSPKALLDKLQRLY*TNKLDV
Trigger: AACATCAAGCTTGTTTGTCCAGTAGAGCCTTTGGAG...TTTGTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS TCA 90 bp CCCGCCGGCGGCGCCGTAGCTCCTCCACCCCGCAGACCGTGGGCCTaGGGCGGCCCTGCCGTCGGCTCCACATGGTGGAGCAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PAGGAVAPPPRRPWA*GGPAVGSTWWSRRR
Trigger: CCTCCTCCTGCTCCACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCCCACGGTCTGCGGGGTGGAGGAGCTACGGCGCCGCCGGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252100.6
ENST00000394669.8
ENST00000394671.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
ENST00000511410.5
ENST00000514449.5
ENST00000515653.1
CDS GCA 90 bp CGCCGTAGCTCCTCCACCCCGCAGACCGTGGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTGGAGCAGGAGGAGGAAAGCCGAAGG +
Preference number: 5 (lower is better)
Translates to: RRSSSTPQTVGLRRP*RRLHMVEQEEESRR
Trigger: CCTTCGGCTTTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCCCACGGTCTGCGGGGTGGAGGAGCTACGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000394669.8
ENST00000394671.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
ENST00000511410.5
ENST00000514449.5
ENST00000515653.1
CDS GCA 90 bp TCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGCAGTGCTCCCGCTCCCGCCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SSGASFLSSLLLTSC*SLRAFRSAPAPAGG
Trigger: GCCGCCGGCGGGAGCGGGAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS GCA 90 bp GCTTCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTCCGCAGTGCTCCCGCTCCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: ASSGASFLSSLLLTS*CSLRAFRSAPAPAG
Trigger: GCCGGCGGGAGCGGGAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS GCA 90 bp TCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGCAGTGCTGGGGGCAGAGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: SSGASFLSSLLLTSC*SLRAFRSAGGRGAG
Trigger: GCCGGCTCCTCTGCCCCCAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514449.5
CDS GCA 90 bp GCTTCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTCCGCAGTGCTGGGGGCAGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: ASSGASFLSSLLLTS*CSLRAFRSAGGRGA
Trigger: GGCTCCTCTGCCCCCAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514449.5
CDS CCA 90 bp CATGCAGGCACCGAGCCGCCTCAAGCTGCAGCAGGGCCTGGTTGCTaGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCTAT +
Preference number: 5 (lower is better)
Translates to: HAGTEPPQAAAGPGC*SGARPGSACCPPAY
Trigger: ATAGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGGCCCTGCTGCAGCTTGAGGCGGCTCGGTGCCTGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS TCA 90 bp CCTCTCCAGCTTCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTaGCCAGCTGCTGCTCCCTCCGCGCCTTCCGCAGTGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PLQLPLGRRFSAASC*PAAAPSAPSAVLPP
Trigger: GGGAGGCAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000511410.5
ENST00000515653.1
CDS TCA 90 bp CCTCTCCAGCTTCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTaGCCAGCTGCTGCTCCCTCCGCGCCTTCCGCAGTGCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: PLQLPLGRRFSAASC*PAAAPSAPSAVLPL
Trigger: GAGCGGGAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS TCA 90 bp CCTCTCCAGCTTCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTaGCCAGCTGCTGCTCCCTCCGCGCCTTCCGCAGTGCGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PLQLPLGRRFSAASC*PAAAPSAPSAVRGP
Trigger: AGGCCCACGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513002.5
CDS TCA 90 bp CCTCTCCAGCTTCCTCTGGGGCGTCGTTTCTCAGCAGCCTCTTGCTaGCCAGCTGCTGCTCCCTCCGCGCCTTCCGCAGTGCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: PLQLPLGRRFSAASC*PAAAPSAPSAVLGA
Trigger: TGCCCCCAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514449.5
CDS CCA 90 bp AGCGTGGGAAGGACGACCACAACCCAGAACCCGCGGCTCCGAGCCTaGGGTCTCAACTTATCCCCGACCGCCATATACCCCCGCGCTCCC +
Preference number: 5 (lower is better)
Translates to: SVGRTTTTQNPRLRA*GLNLSPTAIYPRAP
Trigger: GGGAGCGCGGGGGTATATGGCGGTCGGGGATAAGTTGAGACCCCAGGCTCGGAGCCGCGGGTTCTGGGTTGTGGTCGTCCTTCCCACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514449.5
CDS-3UTR CAA 90 bp CTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCTGTCCCCCGCTGGGCTaGCCGCAGGAACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LGFPEDRSHTSLSSFLWGCPPLG*PQELLH
Trigger: GTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACA...GCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS-3UTR CAA 90 bp TCAGGGTGCTGCAAGCCTCGACGAAGGCTGACCAGAGCCCCCTCTCTCTCCTTTTGTCCCCCGCTGGGCTaGCCGCAGGAACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: SGCCKPRRRLTRAPSLSFCPPLG*PQELLH
Trigger: GTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACA...AAAGGAGAGAGAGGGGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
CDS TCA 90 bp AGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCTATGTGAGTaGGTACCAGAGCCCTGCTTAGCTTGTGGTCCATCCCTCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RSPTRVRMLPSSLCE*VPEPCLACGPSLRA
Trigger: GGCTCTGAGGGATGGACCACAAGCTAAGCAGGGCTCTGGTACTCACTCACATAGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS TCA 90 bp GGTCAGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCTATGTaGGTGAGTACCAGAGCCCTGCTTAGCTTGTGGTCCATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GQEPDQGPHAALQPM*VSTRALLSLWSIPQ
Trigger: CTGAGGGATGGACCACAAGCTAAGCAGGGCTCTGGTACTCACTCACATAGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS CCA 90 bp GGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GFPEDRSHTSLSSFL*GVVSQQPLADQLLL
Trigger: GAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000252100.6
ENST00000394669.8
ENST00000394671.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
ENST00000511410.5
ENST00000513002.5
ENST00000514449.5
ENST00000515653.1
CDS-3UTR CAA 90 bp GGAACTGCTGCACCTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTGGAGCAGCTATCCTaGCGGCTCACAAGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GTAAPRFPRGSQPHIPLQLEQLS*RLTRGW
Trigger: CCACCCTCTTGTGAGCCGCAAGGATAGCTGCTCCAG...CTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAGGTGCAGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CAA 90 bp CTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCATGTCCCCCGCTGGGCTaGCCGCAGGAACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LELPQPVEAGTRHIRELPCPPLG*PQELLH
Trigger: GTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACA...TGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504069.6
ENST00000515653.1
CDS-3UTR CAA 90 bp AGGAGCCCGACCAGGGTCCGCATGCTGCCCTCCAGCCGGATGAAGGTTTGCTGTCAGCCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RSPTRVRMLPSSRMKVCCQPDEG*LCFRVL
Trigger: CAGCACCCTGAAACACAGCAAACCTTCATCCGGCTG...ACAGCAAACCTTCATCCGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CAA 90 bp CTCGGTTTCCCCGAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTGGGGCACAAAAGCACTGGGCTaGGCCTGTTTCATGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGFPEDRSHTSLSSFLWGTKALG*ACFMPG
Trigger: GCCTGGCATGAAACAGGCCAAGCCCAGTGCTTTTGT...GCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTCGGGGAAACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS-3UTR CAA 90 bp ACAAGAGGGTGGGGAGATGATGGGTGTAGCCATGGCTGTAGGCATAAGGGCAAATGTCCCCCGCTGGGCTaGCCGCAGGAACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: TRGWGDDGCSHGCRHKGKCPPLG*PQELLH
Trigger: GTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACA...TTTGCCCTTATGCCTACAGCCATGGCTACACCCATCATCTCCCCACCCTCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505086.2
CDS TCA 90 bp AGAGCCCCAACTCCTCCCTCCACCACACCATCCACACTGACCGGATaGAGGTTTGCTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGGC +
Preference number: 5 (lower is better)
Translates to: RAPTPPSTTPSTLTG*RFAVFQGAASLDEG
Trigger: GCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGTCAGTGTGGATGGTGTGGTGGAGGGAGGAGTTGGGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS GCA 90 bp GCATTTGCCCTCCCACAGTCTCCACTGCTGCCTCAGTTAGCAGGTTaGTTAGACATCGAAGCACGGGGCATGCCAGCAGCTCCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: AFALPQSPLLPQLAG*LDIEARGMPAAPVL
Trigger: CAGGACTGGAGCTGCTGGCATGCCCCGTGCTTCGATGTCTAAGCAACCTGCTAACTGAGGCAGCAGTGGAGACTGTGGGAGGGCAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509269.1
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS-3UTR CAA 90 bp CTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCCAACAGCGACCCCAGGGTaGAGCTTTGGGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: LELPQPVEAGTRHIRELPTATPG*SFGPGC
Trigger: GCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTGT...TGGAAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS GCA 90 bp CAGGGGCCCTGGCCACAGCCGCTGGCAGTAAGCAGGACCCTTTTCTaGAACATTGCACAGAACTGTGAGCACCATTACGCTCACCACGTT +
Preference number: 5 (lower is better)
Translates to: QGPWPQPLAVSRTLF*NIAQNCEHHYAHHV
Trigger: AACGTGGTGAGCGTAATGGTGCTCACAGTTCTGTGCAATGTTGCAGAAAAGGGTCCTGCTTACTGCCAGCGGCTGTGGCCAGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000510336.5
CDS GCA 90 bp CAGGGGCCCTGGCCACAGCCGCTGGCAGTAAGCAGGACCCTTTTCTaGAACATTGCACAGAACTGTGAGCACGCTCACCACGTTAGATAC +
Preference number: 5 (lower is better)
Translates to: QGPWPQPLAVSRTLF*NIAQNCEHAHHVRY
Trigger: GTATCTAACGTGGTGAGCGTGCTCACAGTTCTGTGCAATGTTGCAGAAAAGGGTCCTGCTTACTGCCAGCGGCTGTGGCCAGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS-3UTR CAA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCAGCCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWQPDEG*LCFRVL
Trigger: CAGCACCCTGAAACACAGCAAACCTTCATCCGGCTG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCATCTCTGAGCTGCATTaGCCCTCCCACAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSISELH*PSHSLH
Trigger: GTGGAGACTGTGGGAGGGCAAATGCAGCTCAGAGAT...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp AGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCTGGCTGTTTGCAGTGAGGTaGTTGAGGAGCCAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: SPFWSSCLDSAEWKGRSWLFAVR*LRSQRP
Trigger: GGGCCTTTGGCTCCTCAACAACCTCACTGCAAACAG...CCAGCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp TTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTAGGAACTGCTGCACCTaGCCCCCTCACCTCGGTTTC +
Preference number: 5 (lower is better)
Translates to: FSGASSACRSWDKAYPRARNCCT*PPHLGF
Trigger: GAAACCGAGGTGAGGGGGCAAGGTGCAGCAGTTCCT...AGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR CAA 90 bp AAAGGCTCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACTGTCCCCCGCTGGGCTaGCCGCAGGAACTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: KGSTGQTSLMLRERGMSDCPPLG*PQELLH
Trigger: GTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACA...GTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGAGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTACAGCGACCCCAGGGTaGAGCTTTGGGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: GVGAENMRPHYGPKSPKATATPG*SFGPGC
Trigger: GCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTGT...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GCCAAGATGGAGGGAATGATCTTCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGGGACGGATGAAGGTTaGCTGTGTTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AKMEGMIFSGASSACRSWGTDEG*LCFRVL
Trigger: CAGCACCCTGAAACACAGCAAACCTTCATCCGTCCC...CCAGCTTCTACAGGCTGAGGAAGCTCCAGAGAAGATCATTCCCTCCATCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504069.6
CDS GCA 90 bp TGCAGAAGGATAAATAAGGCTGCCACAACACGCTCATCTCTGAGCTaGATTTGCCCTCCCACAGTCTCCACTGCTGCCTCAGTTAGCAGG +
Preference number: 5 (lower is better)
Translates to: CRRINKAATTRSSLS*ICPPTVSTAASVSR
Trigger: CCTGCTAACTGAGGCAGCAGTGGAGACTGTGGGAGGGCAAATGCAGCTCAGAGATGAGCGTGTTGTGGCAGCCTTATTTATCCTTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509269.1
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS-3UTR CAA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAACAGCGACCCCAGGGTaGAGCTTTGGGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: VGAENMRPHYGPKSPKALTATPG*SFGPGC
Trigger: GCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTGT...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp CTGAGTCCCTTTTGGTCCTCCTGCCTGGATAGTGCTGAGTGGAAGGGGAGGAGCACTGGACAAACAAGCTaGATGTTAAGAGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: LSPFWSSCLDSAEWKGRSTGQTS*MLRERG
Trigger: TCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGT...GCTCCTCCCCTTCCACTCAGCACTATCCAGGCAGGAGGACCAAAAGGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp TCTCTGGAGCTTCCTCAGCCTGTAGAAGCTGGGACAAGGCATATCCGAGAGCTTCTACCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SLELPQPVEAGTRHIRELLPDEG*LCFRVL
Trigger: CAGCACCCTGAAACACAGCAAACCTTCATCCGGTAG...AAGCTCTCGGATATGCCTTGTCCCAGCTTCTACAGGCTGAGGAAGCTCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS-3UTR CAA 90 bp TGTACCTCAGTGACCAGCACAGTGTCCTCGGTTTCCCCGAGGATCGCAGCCACATCTATCCTTTCATCTTaGTGTACCTCAGTGACCAGC +
Preference number: 5 (lower is better)
Translates to: CTSVTSTVSSVSPRIAATSILSS*CTSVTS
Trigger: GCTGGTCACTGAGGTACACAAAGATGAAAGGATAGA...TGTGGCTGCGATCCTCGGGGAAACCGAGGACACTGTGCTGGTCACTGAGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509217.6
CDS TCA 90 bp TCACTCTCCACGATCAGGTTACCCAGTGTATACAGACACAGCTCCTaGGAACAGGCAACAAAAGCACTGGGCTTGGCCTGTTTCATGCCA +
Preference number: 5 (lower is better)
Translates to: SLSTIRLPSVYRHSS*EQATKALGLACFMP
Trigger: TGGCATGAAACAGGCCAAGCCCAGTGCTTTTGTTGCCTGTTCTCAGGAGCTGTGTCTGTATACACTGGGTAACCTGATCGTGGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS-3UTR CAA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACCAGCCGGATGAAGGTTaGCTGTGTTTCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AENMRPHYGPKSPKALLDQPDEG*LCFRVL
Trigger: CAGCACCCTGAAACACAGCAAACCTTCATCCGGCTG...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAATCTCTGAGCTGCATTaGCCCTCCCACAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VGAENMRPHYGPKSPKALISELH*PSHSLH
Trigger: GTGGAGACTGTGGGAGGGCAAATGCAGCTCAGAGAT...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GGTGTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTTTTGCAGTGAGGTTGTaGAGGAGCCAAAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GVGAENMRPHYGPKSPKAFAVRL*RSQRPS
Trigger: TGAGGGCCTTTGGCTCCTCAACAACCTCACTGCAAA...AGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGTTTGCAGTGAGGTaGTTGAGGAGCCAAAGGCCC +
Preference number: 5 (lower is better)
Translates to: VGAENMRPHYGPKSPKALLFAVR*LRSQRP
Trigger: GGGCCTTTGGCTCCTCAACAACCTCACTGCAAACAG...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS TCA 90 bp TTAAGAGAGAGGGGAATGAGTGACATTGAGAAACAAGATCACCCTTaGAGAGCTGTCTGCTGGAGAGCATACACACGATCCTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRERGMSDIEKQDHP*RAVCWRAYTRSWSW
Trigger: CCAGCTCCAGGATCGTGTGTATGCTCTCCAGCAGACAGCTCTTCAAGGGTGATCTTGTTTCTCAATGTCACTCATTCCCCTCTCTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000510336.5
ENST00000515265.2
CDS GCA 90 bp AAGACTCAATTCCCACAGCCTCATGGGTCAGCCTACTCCAGAGGGTaGATTCCCCAACAAGAGGATGAAGTTTCTGACATGGAACCTATA +
Preference number: 5 (lower is better)
Translates to: KTQFPQPHGSAYSRG*IPQQEDEVSDMEPI
Trigger: TATAGGTTCCATGTCAGAAACTTCATCCTCTTGTTGGGGAATGCACCCTCTGGAGTAGGCTGACCCATGAGGCTGTGGGAATTGAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS-3UTR CAA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACGCCTCAGTTAGCAGGTaGCTTAGACATCGAAGCACG +
Preference number: 5 (lower is better)
Translates to: AENMRPHYGPKSPKALLDASVSR*LRHRST
Trigger: CGTGCTTCGATGTCTAAGCAACCTGCTAACTGAGGC...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTATTTGCAGTGAGGTTGTaGAGGAGCCAAAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: VGAENMRPHYGPKSPKALFAVRL*RSQRPS
Trigger: TGAGGGCCTTTGGCTCCTCAACAACCTCACTGCAAA...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp GCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTACTGGACCCCTTTTCTGCAACATaGCACAGAACTGTGAGCACC +
Preference number: 5 (lower is better)
Translates to: AENMRPHYGPKSPKALLDPFSAT*HRTVST
Trigger: GGTGCTCACAGTTCTGTGCAATGTTGCAGAAAAGGG...GTCCAGTAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS-3UTR CAA 90 bp TCTACTGGACAAACAAGCTTGATGTTAAGAGAGAGGGGAATGAGTGACATTGAGGCCTCAGTTAGCAGGTaGCTTAGACATCGAAGCACG +
Preference number: 5 (lower is better)
Translates to: STGQTSLMLRERGMSDIEASVSR*LRHRST
Trigger: CGTGCTTCGATGTCTAAGCAACCTGCTAACTGAGGC...CTCAATGTCACTCATTCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS CCA 90 bp ACTCCAGAGGGTGCATTCCCCAACAAGAGGATGAAGTTTCTGACATaGAACCTATATAGGTTAGCCAGGCCCAGAGAAACAACTATAGTT +
Preference number: 5 (lower is better)
Translates to: TPEGAFPNKRMKFLT*NLYRLARPRETTIV
Trigger: AACTATAGTTGTTTCTCTGGGCCTGGCTAACCTATATAGGTTCCATGTCAGAAACTTCATCCTCTTGTTGGGGAATGCACCCTCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS-3UTR CAA 90 bp GTGGGAGCAGAGAACATGAGACCTCATTATGGTCCTAAATCTCCAAAGGCTCTAACTGGACAAACAAGCTaGATGTTAAGAGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: VGAENMRPHYGPKSPKALTGQTS*MLRERG
Trigger: TCCCCTCTCTCTTAACATCAAGCTTGTTTGTCCAGT...TAGAGCCTTTGGAGATTTAGGACCATAATGAGGTCTCATGTTCTCTGCTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252100.6
ENST00000394671.8
CDS GCA 72 bp TCCTCCACCCCGCAGACCGTGGGCCTGAGGCGGCCCTaGCGTCGGCTCCACATGGTGGAGCAGGAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: SSTPQTVGLRRP*RRLHMVEQEEE
Trigger: TTCCTCCTCCTGCTCCACCATGTGGAGCCGACGGCAGGGCCGCCTCAGGCCCACGGTCTGCGGGGTGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252100.6
ENST00000394669.8
ENST00000394671.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
ENST00000511410.5
ENST00000514449.5
ENST00000515653.1
CDS GCA 72 bp GGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTCCGCAGTGCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: GASFLSSLLLTS*CSLRAFRSAWA
Trigger: GGCCCACGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513002.5
CDS GCA 72 bp GCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGCAGTGCTGCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: ASFLSSLLLTSC*SLRAFRSAASR
Trigger: GCGGGAGGCAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000511410.5
ENST00000515653.1
CDS GCA 72 bp GCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGCAGTGCTCCCGCTCCC +
Preference number: 6 (lower is better)
Translates to: ASFLSSLLLTSC*SLRAFRSAPAP
Trigger: GGGAGCGGGAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS GCA 72 bp GGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTaGTGCTCCCTCCGCGCCTTCCGCAGTGCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: GASFLSSLLLTS*CSLRAFRSAPA
Trigger: AGCGGGAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394669.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
CDS GCA 72 bp GCGTCGTTTCTCAGCAGCCTCTTGCTGACCAGCTGCTaGTCCCTCCGCGCCTTCCGCAGTGCTGGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: ASFLSSLLLTSC*SLRAFRSAGGR
Trigger: TCTGCCCCCAGCACTGCGGAAGGCGCGGAGGGAGCAGCAGCTGGTCAGCAAGAGGCTGCTGAGAAACGACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514449.5
CDS GCA 72 bp GGTTGCTGGTCAGGAGCCCGACCAGGGTCCGCATGCTaGCCTCCAGCCTATGTGAGTGAGTACCAGAGCCCT +
Preference number: 6 (lower is better)
Translates to: GCWSGARPGSAC*PPAYVSEYQSP
Trigger: AGGGCTCTGGTACTCACTCACATAGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS GCA 72 bp CCTGGTTGCTGGTCAGGAGCCCGACCAGGGTCCGCATaGTGCCCTCCAGCCTATGTGAGTGAGTACCAGAGC +
Preference number: 6 (lower is better)
Translates to: PGCWSGARPGSA*CPPAYVSEYQS
Trigger: GCTCTGGTACTCACTCACATAGGCTGGAGGGCAGCATGCGGACCCTGGTCGGGCTCCTGACCAGCAACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS CCA 72 bp AGGACGACCACAACCCAGAACCCGCGGCTCCGAGCCTaGGGTCTCAACTTATCCCCGACCGCCATATACCCC +
Preference number: 6 (lower is better)
Translates to: RTTTTQNPRLRA*GLNLSPTAIYP
Trigger: GGGGTATATGGCGGTCGGGGATAAGTTGAGACCCCAGGCTCGGAGCCGCGGGTTCTGGGTTGTGGTCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514449.5
CDS TCA 72 bp CCCGACCAGGGTCCGCATGCTGCCCTCCAGCCTATGTaGGTGAGTACCAGAGCCCTGCTTAGCTTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PDQGPHAALQPM*VSTRALLSLWS
Trigger: GGACCACAAGCTAAGCAGGGCTCTGGTACTCACTCACATAGGCTGGAGGGCAGCATGCGGACCCTGGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS GCA 72 bp TCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTGCTaGACCTGGAGTTCAGGGCAGGGAAAGGAGAACACA +
Preference number: 6 (lower is better)
Translates to: SSVPRWACRRNC*TWSSGQGKENT
Trigger: TGTGTTCTCCTTTCCCTGCCCTGAACTCCAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510336.5
CDS GCA 72 bp TTTTCCTCTGTCCCCCGCTGGGCTTGCCGCAGGAACTaGTGCACCTGGAGTTCAGGGCAGGGAAAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: FSSVPRWACRRN*CTWSSGQGKEN
Trigger: GTTCTCCTTTCCCTGCCCTGAACTCCAGGTGCAGCAGTTCCTGCGGCAAGCCCAGCGGGGGACAGAGGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510336.5
CDS CCA 72 bp GAGGATCGCAGCCACACATCCCTCTCCAGCTTCCTCTaGGGCGTCGTTTCTCAGCAGCCTCTTGCTGACCAG +
Preference number: 6 (lower is better)
Translates to: EDRSHTSLSSFL*GVVSQQPLADQ
Trigger: CTGGTCAGCAAGAGGCTGCTGAGAAACGACGCCCCAGAGGAAGCTGGAGAGGGATGTGTGGCTGCGATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000252100.6
ENST00000394669.8
ENST00000394671.8
ENST00000504069.6
ENST00000505086.2
ENST00000509217.6
ENST00000511410.5
ENST00000513002.5
ENST00000514449.5
ENST00000515653.1
CDS TCA 72 bp AGAGCATACACACGATCCTGGAGCTGGGCCTCTTCCTaGTGCCTTTCCAGGGCTTGCAGCCCTGACTGCTGC +
Preference number: 6 (lower is better)
Translates to: RAYTRSWSWASS*CLSRACSPDCC
Trigger: GCAGCAGTCAGGGCTGCAAGCCCTGGAAAGGCATCAGGAAGAGGCCCAGCTCCAGGATCGTGTGTATGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000510336.5
ENST00000515265.2
CDS TCA 72 bp ACCAGGGTCCGCATGCTGCCCTCCAGCCTATGTGAGTaGGTACCAGAGCCCTGCTTAGCTTGTGGTCCATCC +
Preference number: 6 (lower is better)
Translates to: TRVRMLPSSLCE*VPEPCLACGPS
Trigger: GGATGGACCACAAGCTAAGCAGGGCTCTGGTACTCACTCACATAGGCTGGAGGGCAGCATGCGGACCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS GCA 72 bp TGGAGCTACCGGATGAAGGTTTGCTGTGTTTCAGGGTaGTGCAAGCCTCGACGAAGGCTGACCAGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: WSYRMKVCCVSG*CKPRRRLTRAP
Trigger: GGGGGCTCTGGTCAGCCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGTAGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515653.1
CDS CAA 72 bp CCTCCCACAGTCTCCACTGCTGCCTCAGTTAGCAGGTaGCTTAGACATCGAAGCACGGGGCATGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PPTVSTAASVSR*LRHRSTGHASS
Trigger: GCTGCTGGCATGCCCCGTGCTTCGATGTCTAAGCAACCTGCTAACTGAGGCAGCAGTGGAGACTGTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509269.1
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS CAA 90 bp TGCATTTGCCCTCCCACAGTCTCCACTGCTGCCTCAGTTAGCAGGTaGCTTAGACATCGAAGCACGGGGCATGCCAGCAGCTCCAGTCCT +
Preference number: 6 (lower is better)
Translates to: CICPPTVSTAASVSR*LRHRSTGHASSSSP
Trigger: AGGACTGGAGCTGCTGGCATGCCCCGTGCTTCGATGTCTAAGCAACCTGCTAACTGAGGCAGCAGTGGAGACTGTGGGAGGGCAAATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509269.1
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS GCA 72 bp CTCCCACAGTCTCCACTGCTGCCTCAGTTAGCAGGTTaGTTAGACATCGAAGCACGGGGCATGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LPQSPLLPQLAG*LDIEARGMPAA
Trigger: AGCTGCTGGCATGCCCCGTGCTTCGATGTCTAAGCAACCTGCTAACTGAGGCAGCAGTGGAGACTGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509269.1
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS CAA 90 bp AGCAACCCCAGAGTAGACAGAGCCCCATGGCCAATGAGCAGAGGATaGCTGACCTGGCTGGGCAACAGGAAGCAAGCAGTCCCTAGGTAT +
Preference number: 6 (lower is better)
Translates to: SNPRVDRAPWPMSRG*LTWLGNRKQAVPRY
Trigger: ATACCTAGGGACTGCTTGCTTCCTGTTGCCCAGCCAGGTCAGCAATCCTCTGCTCATTGGCCATGGGGCTCTGTCTACTCTGGGGTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509269.1
CDS TCA 72 bp ACTCCTCCCTCCACCACACCATCCACACTGACCGGATaGAGGTTTGCTGTGTTTCAGGGTGCTGCAAGCCTC +
Preference number: 6 (lower is better)
Translates to: TPPSTTPSTLTG*RFAVFQGAASL
Trigger: GAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGTCAGTGTGGATGGTGTGGTGGAGGGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS GCA 72 bp CTCCACCACACCATCCACACTGACCGGATGAAGGTTTaGTGTGTTTCAGGGTGCTGCAAGCCTCGACGAAGG +
Preference number: 6 (lower is better)
Translates to: LHHTIHTDRMKV*CVSGCCKPRRR
Trigger: CCTTCGTCGAGGCTTGCAGCACCCTGAAACACAGCAAACCTTCATCCGGTCAGTGTGGATGGTGTGGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511410.5
CDS GCA 72 bp TGGCCACAGCCGCTGGCAGTAAGCAGGACCCTTTTCTaGAACATTGCACAGAACTGTGAGCACGCTCACCAC +
Preference number: 6 (lower is better)
Translates to: WPQPLAVSRTLF*NIAQNCEHAHH
Trigger: GTGGTGAGCGTGCTCACAGTTCTGTGCAATGTTGCAGAAAAGGGTCCTGCTTACTGCCAGCGGCTGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS TCA 72 bp GAAGGCACCAGGCAAACTCCACAGCGACCCCAGGGTTaGGCTTTGGGCCAGGTTGCAACATTTGTAGCATGT +
Preference number: 6 (lower is better)
Translates to: EGTRQTPQRPQG*ALGQVATFVAC
Trigger: ACATGCTACAAATGTTGCAACCTGGCCCAAAGCTCAACCCTGGGGTCGCTGTGGAGTTTGCCTGGTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS CCA 72 bp GCCAGGCCCAGAGAAACAACTATAGTTAGGACTGGATaGGAAGGGAGCCACTGTGTGGCTTCAGAACAGGGG +
Preference number: 6 (lower is better)
Translates to: ARPRETTIVRTG*EGSHCVASEQG
Trigger: CCCCTGTTCTGAAGCCACACAGTGGCTCCCTTCCCATCCAGTCCTAACTATAGTTGTTTCTCTGGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS GCA 72 bp TGGCCACAGCCGCTGGCAGTAAGCAGGACCCTTTTCTaGAACATTGCACAGAACTGTGAGCACCATTACGCT +
Preference number: 6 (lower is better)
Translates to: WPQPLAVSRTLF*NIAQNCEHHYA
Trigger: AGCGTAATGGTGCTCACAGTTCTGTGCAATGTTGCAGAAAAGGGTCCTGCTTACTGCCAGCGGCTGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000510336.5
CDS GCA 72 bp ATAAATAAGGCTGCCACAACACGCTCATCTCTGAGCTaGATTTGCCCTCCCACAGTCTCCACTGCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: INKAATTRSSLS*ICPPTVSTAAS
Trigger: TGAGGCAGCAGTGGAGACTGTGGGAGGGCAAATGCAGCTCAGAGATGAGCGTGTTGTGGCAGCCTTATTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252100.6
ENST00000394671.8
ENST00000509269.1
ENST00000509605.5
ENST00000510336.5
ENST00000515265.2
CDS GCA 72 bp TTCCCACAGCCTCATGGGTCAGCCTACTCCAGAGGGTaGATTCCCCAACAAGAGGATGAAGTTTCTGACATG +
Preference number: 6 (lower is better)
Translates to: FPQPHGSAYSRG*IPQQEDEVSDM
Trigger: CATGTCAGAAACTTCATCCTCTTGTTGGGGAATGCACCCTCTGGAGTAGGCTGACCCATGAGGCTGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS CCA 72 bp GGTGCATTCCCCAACAAGAGGATGAAGTTTCTGACATaGAACCTATATAGGTTAGCCAGGCCCAGAGAAACA +
Preference number: 6 (lower is better)
Translates to: GAFPNKRMKFLT*NLYRLARPRET
Trigger: TGTTTCTCTGGGCCTGGCTAACCTATATAGGTTCCATGTCAGAAACTTCATCCTCTTGTTGGGGAATGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515265.2
CDS CAA 90 bp CTGCCCACTTCACCTGTGAGCCTTCCAATATCACACCTTCAGAACTaGTCATTCACACTAATGCAACTAATAAGCATCTACCTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: LPTSPVSLPISHLQN*SFTLMQLISIYLAV
Trigger: CACTGCAAGGTAGATGCTTATTAGTTGCATTAGTGTGAATGACAAGTTCTGAAGGTGTGATATTGGAAGGCTCACAGGTGAAGTGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510336.5