RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMCO4 (Homo sapiens)

Ensembl gene IDs: ENSG00000162542

Ensembl transcript IDs: ENST00000294543.11, ENST00000375127.5, ENST00000462171.1, ENST00000488449.1, ENST00000489135.5, ENST00000489814.5, ENST00000494342.1, ENST00000496528.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTTGACTCTGCAGGTCTCTGATGAGGGGGCAGCTGCTCCCTGGTaGGGCTCCTCTGGGGACAGGCAGCTTCCCAAGGGTGGGCGTGTT +
Preference number: 1 (lower is better)
Translates to: WLTLQVSDEGAAAPW*GSSGDRQLPKGGRV
Trigger: AACACGCCCACCCTTGGGAAGCTGCCTGTCCCCAGAGGAGCCCCACCAGGGAGCAGCTGCCCCCTCATCAGAGACCTGCAGAGTCAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR GCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTaGCAGTTGATGGTGCCTGTCAGCTGGTGGGCAGCCCTGGAGTGT +
Preference number: 1 (lower is better)
Translates to: SRSELPSLYLRLLCC*QLMVPVSWWAALEC
Trigger: ACACTCCAGGGCTGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR CCA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTaGTGGGCAGCCCTGGAGTGTGGATGGAAGAACAGGCATGCACCT +
Preference number: 1 (lower is better)
Translates to: YLRLLCCCQLMVPVS*WAALECGWKNRHAP
Trigger: AGGTGCATGCCTGTTCTTCCATCCACACTCCAGGGCTGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR CCA 90 bp GAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTaGTTGACTCTGCAGGTCTCTGATGAGGGGGCAGCTGCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: ESPQLVSGPGTLTCA*LTLQVSDEGAAAPW
Trigger: CCAGGGAGCAGCTGCCCCCTCATCAGAGACCTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CCA 90 bp CAGTTGATGGTGCCTGTCAGCTGGTGGGCAGCCCTGGAGTGTGGATaGAAGAACAGGCATGCACCTGGTTTTATTGAGGCCAGGGGAGAG +
Preference number: 1 (lower is better)
Translates to: QLMVPVSWWAALECG*KNRHAPGFIEARGE
Trigger: CTCTCCCCTGGCCTCAATAAAACCAGGTGCATGCCTGTTCTTCCATCCACACTCCAGGGCTGCCCACCAGCTGACAGGCACCATCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR TCA 90 bp GAGAGCCCTCGGGACCTCCTGATGGACAGCCAGACTCCAAAGCTATaGGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTC +
Preference number: 1 (lower is better)
Translates to: ESPRDLLMDSQTPKL*EVQKAHSWFPVLGL
Trigger: GAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATAGCTTTGGAGTCTGGCTGTCCATCAGGAGGTCCCGAGGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR TCA 90 bp TGGAGTTATGCAGCGCACAGCCTACATGGCTGTACAGGGCAGATCTaGTTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACC +
Preference number: 1 (lower is better)
Translates to: WSYAAHSLHGCTGQI*LDLLRAGVSCLLCT
Trigger: GGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGGCTGTGCGCTGCATAACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR CCA 90 bp CATTTAGGAAAGAGGCCTGTGGAAATCCTGTACCTCCAGAGCTCCTaGGAGGAACCCGAGGGTATAAGAGAGAGCTGCATATGGAGACTG +
Preference number: 1 (lower is better)
Translates to: HLGKRPVEILYLQSS*EEPEGIRESCIWRL
Trigger: CAGTCTCCATATGCAGCTCTCTCTTATACCCTCGGGTTCCTCCCAGGAGCTCTGGAGGTACAGGATTTCCACAGGCCTCTTTCCTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR-3UTR CCA 90 bp GCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGGCTCCTCTaGGGACAGGCAGCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: AFFVPAPALLLPVDGACQLVGLL*GQAASQ
Trigger: TTGGGAAGCTGCCTGTCCCCAGAGGAGCCCCACCAG...CTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR-3UTR CCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGTACCTCCAGAGCTCCTaGGAGGAACCCGAGGGTATA +
Preference number: 2 (lower is better)
Translates to: SRSELPSLYLRLLCCCQLYLQSS*EEPEGI
Trigger: TATACCCTCGGGTTCCTCCCAGGAGCTCTGGAGGTA...CAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR-3UTR CCA 90 bp CCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGCAGCTTCCCAAGGGTaGGCGTGTTCTCTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: PTVGFRSWDSNLCLVDSAAASQG*ACSLLQ
Trigger: TTGGAGGAGAGAACACGCCCACCCTTGGGAAGCTGC...TGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR-3UTR CCA 90 bp GTGGATGGAAGAACAGGCATGCACCTGGTTTTATTGAGGCCAGGGGAGAGCTGGCAGAAAGCCCACAGTTaGTTTCCGGTCCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: VDGRTGMHLVLLRPGESWQKAHS*FPVLGL
Trigger: GAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTG...CCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCATGCCTGTTCTTCCATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CAA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTaGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: ADLIGSPKSRSELPS*YLRLLCCCQLMVPV
Trigger: GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR-3UTR CCA 90 bp TTCTTGTCCCCAGGCCTAGTTCACAGCCATACTGAATGCAATTCAGCATGTATTGCAGCTGCTCCCTGGTaGGGCTCCTCTGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: FLSPGLVHSHTECNSACIAAAPW*GSSGDR
Trigger: CCTGTCCCCAGAGGAGCCCCACCAGGGAGCAGCTGC...AATACATGCTGAATTGCATTCAGTATGGCTGTGAACTAGGCCTGGGGACAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CAA 90 bp CAATTCAGCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTaGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTCAT +
Preference number: 2 (lower is better)
Translates to: QFSMYSPCSVSGVQM*HDGGAHSHCVCVTH
Trigger: ATGAGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGCTGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR-3UTR CCA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCAGCTGCATATGGAGACTaGGGAAGACGGCTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSAAYGD*GRRLRS
Trigger: GGACCTGAGCCGTCTTCCCCAGTCTCCATATGCAGC...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR-3UTR TCA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCACAGACTCCAAAGCTATaGGAAGTACAGAAAGCCCAC +
Preference number: 2 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSQTPKL*EVQKAH
Trigger: GTGGGCTTTCTGTACTTCTCATAGCTTTGGAGTCTG...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR GCA 72 bp GAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTaGCAGTTGATGGTGCCTGTCAGCTGGTGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: ELPSLYLRLLCC*QLMVPVSWWAA
Trigger: GGCTGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR GCA 72 bp AGCTCCTGGGAGGAACCCGAGGGTATAAGAGAGAGCTaGATATGGAGACTGGGGAAGACGGCTCAGGTCCCC +
Preference number: 3 (lower is better)
Translates to: SSWEEPEGIRES*IWRLGKTAQVP
Trigger: GGGGACCTGAGCCGTCTTCCCCAGTCTCCATATGCAGCTCTCTCTTATACCCTCGGGTTCCTCCCAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CCA 72 bp TGGGAGGAACCCGAGGGTATAAGAGAGAGCTGCATATaGAGACTGGGGAAGACGGCTCAGGTCCCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: WEEPEGIRESCI*RLGKTAQVPCC
Trigger: ACAGCAGGGGACCTGAGCCGTCTTCCCCAGTCTCCATATGCAGCTCTCTCTTATACCCTCGGGTTCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CCA 72 bp CAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTaGTTGACTCTGCAGGTCTCTGATGAGGGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: QLVSGPGTLTCA*LTLQVSDEGAA
Trigger: AGCTGCCCCCTCATCAGAGACCTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR-3UTR CAA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGATGCACCTGGTTTTATaGAGGCCAGGGGAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: FFVPAPALLLPVDGACQLMHLVL*RPGESW
Trigger: CCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCAT...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR TCA 72 bp GCAGCGCACAGCCTACATGGCTGTACAGGGCAGATCTaGTTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: AAHSLHGCTGQI*LDLLRAGVSCL
Trigger: AAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGGCTGTGCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR TCA 72 bp TGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTaGCTCATGTCCCTGGAGTTATGCAGCGCACAGCCT +
Preference number: 3 (lower is better)
Translates to: CMTGEHTHIVSV*LMSLELCSAQP
Trigger: AGGCTGTGCGCTGCATAACTCCAGGGACATGAGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR TCA 72 bp CGGGACCTCCTGATGGACAGCCAGACTCCAAAGCTATaGGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTC +
Preference number: 3 (lower is better)
Translates to: RDLLMDSQTPKL*EVQKAHSWFPV
Trigger: GACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATAGCTTTGGAGTCTGGCTGTCCATCAGGAGGTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CCA 72 bp AAGAGGCCTGTGGAAATCCTGTACCTCCAGAGCTCCTaGGAGGAACCCGAGGGTATAAGAGAGAGCTGCATA +
Preference number: 3 (lower is better)
Translates to: KRPVEILYLQSS*EEPEGIRESCI
Trigger: TATGCAGCTCTCTCTTATACCCTCGGGTTCCTCCCAGGAGCTCTGGAGGTACAGGATTTCCACAGGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CCA 72 bp GAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTaGGACTCTAACCTGTGCTTGGTTGACTCTGCAGGT +
Preference number: 3 (lower is better)
Translates to: EKYRKPTVGFRS*DSNLCLVDSAG
Trigger: ACCTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CCA 72 bp AGCACACTCACATTGTGTCTGTGTGACTCATGTCCCTaGAGTTATGCAGCGCACAGCCTACATGGCTGTACA +
Preference number: 3 (lower is better)
Translates to: STLTLCLCDSCP*SYAAHSLHGCT
Trigger: TGTACAGCCATGTAGGCTGTGCGCTGCATAACTCCAGGGACATGAGTCACACAGACACAATGTGAGTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
3UTR GCA 72 bp TGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTaGATGACGGGGGAGCACACTCACATTGTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: CIHHALLVVSRC*MTGEHTHIVSV
Trigger: CACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCGGCTATGCCGGCTGCTaGGCCCAGAGCCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVGYAGC*AQSRCP
Trigger: GGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCC...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACGGCTATGCCGGCTGCTaGGCCCAGAGCCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHGYAGC*AQSRCP
Trigger: GGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCC...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTCAGCTCCCGGCCCGTaGGCAGGTGTGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: PSLYLRLLCCCQLMVPVSSAPGP*AGVAPP
Trigger: AGGGGGAGCCACACCTGCCCACGGGCCGGGAGCTGA...GCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGTCAGCTCCCGGCCCGTaGGCAGGTGTGGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FVPAPALLLPVDGACQLVSAPGP*AGVAPP
Trigger: AGGGGGAGCCACACCTGCCCACGGGCCGGGAGCTGA...CACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGGGTCGTCGCCCCTGCTaGCGGGAGAGCAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: SRSELPSLYLRLLCCCQLGRRPC*RESRMW
Trigger: CCACATCCTGCTCTCCCGGCAGCAGGGGCGACGACC...CAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCACTGGCTTGGTGCGGATaGCCACGGCCTTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWALAWCG*PRPSGW
Trigger: CCATCCTGAAGGCCGTGGGCATCCGCACCAAGCCAG...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGCCCGTGGGCAGGTGTaGCTCCCCCTCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PTVGFRSWDSNLCLVDSAARGQV*LPLCSG
Trigger: CCCACTGCAGAGGGGGAGCCACACCTGCCCACGGGC...TGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGGGGCCTTTCAGGGCTaGCAGCAGCAGGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWGAFQG*QQQEGR
Trigger: CCTCCCTTCCTGCTGCTGCCAGCCCTGAAAGGCCCC...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCAGTGCCTGTCAGCTGGTaGGCAGCCCTGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWAVPVSW*AALECG
Trigger: TCCACACTCCAGGGCTGCCCACCAGCTGACAGGCAC...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCAATGGTGATGTGCAGCTaGCTGCCCTCCGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWAMVMCS*LPSVRG
Trigger: GCCTCTGACGGAGGGCAGGCAGCTGCACATCACCAT...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGGGTCGTCGCCCCTGCTaGCGGGAGAGCAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PQLVSGPGTLTCAWLTLQGRRPC*RESRMW
Trigger: CCACATCCTGCTCTCCCGGCAGCAGGGGCGACGACC...CTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATGCCCGTGGGCAGGTGTaGCTCCCCCTCTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PCSVSGVQMLHDGGAHSHARGQV*LPLCSG
Trigger: CCCACTGCAGAGGGGGAGCCACACCTGCCCACGGGC...ATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGCTTCTCGTCCCAGCCTaGCTTGGTGCGGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWLLVPA*LGADAH
Trigger: GTGGGCATCCGCACCAAGCCAGGCTGGGACGAGAAG...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGCCCGTGCTGGGGCCCTaGGTCTTGCAGGCACAATCG +
Preference number: 4 (lower is better)
Translates to: SRSELPSLYLRLLCCCQLPVLGP*VLQAQS
Trigger: CGATTGTGCCTGCAAGACCCAGGGCCCCAGCACGGG...CAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGCTGGTGGGGCTCCTCTaGGGACAGGCAGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWLVGLL*GQAASQ
Trigger: TTGGGAAGCTGCCTGTCCCCAGAGGAGCCCCACCAG...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACGCTACCAGAGGCTGCTaGGGCAGCCTCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHATRGC*GSLWHG
Trigger: GCCATGCCAGAGGCTGCCTCAGCAGCCTCTGGTAGC...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp GAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTCAGCCCACGGGGCACTaGAGGTGCGGTATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: ELPSLYLRLLCCCQLMVPQPTGH*RCGICQ
Trigger: CTGGCAAATACCGCACCTTCAGTGCCCCGTGGGCTG...AGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCCATAGGCGAAGCGGTTaGCCTCAGTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVHRRSG*PQSAPG
Trigger: GCCGGGAGCTGACTGAGGCCAACCGCTTCGCCTATG...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTTGCCATGGCTGCAGATaGGGGGCCTTTCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AAFFVPAPALLLPVDGACCHGCR*GAFQGW
Trigger: CCAGCCCTGAAAGGCCCCCCATCTGCAGCCATGGCA...ACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp GCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGATCGGGGCAGCCCAGTaGGTTGGGGTCCATGCCATG +
Preference number: 4 (lower is better)
Translates to: AFFVPAPALLLPVDGACQIGAAQ*VGVHAM
Trigger: CATGGCATGGACCCCAACCCACTGGGCTGCCCCGAT...CTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp AGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGGCAGCTGCTCCCTGGTaGGGCTCCTCTGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGVQMLHDGGAHSHCVCVAAAPW*GSSGDR
Trigger: CCTGTCCCCAGAGGAGCCCCACCAGGGAGCAGCTGC...CACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGGGCCTCTCTCTGTCTaGAGACAGGCTGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWGPLSV*RQAAQV
Trigger: AACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCC...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGCAGGCCAGGCAGTACTaGTCACGGCTGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGVQMLHDGGAHSHCVCVQARQY*SRLWAR
Trigger: CCTGGCCCACAGCCGTGAGCAGTACTGCCTGGCCTG...CACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATCCGGCGACACGGAGCTaGACCGAGGATGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PCSVSGVQMLHDGGAHSHPATRS*TEDVRY
Trigger: GTACCGCACATCCTCGGTGCAGCTCCGTGTCGCCGG...ATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGCTGGCTTGGTGCGGATaGCCACGGCCTTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: FFVPAPALLLPVDGACQLLAWCG*PRPSGW
Trigger: CCATCCTGAAGGCCGTGGGCATCCGCACCAAGCCAG...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GTGGATGGAAGAACAGGCATGCACCTGGTTTTATTGAGGCCAGGGGAGAGCTGGGTGGGTTGGGGTCCATaGCATGGCTGCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: VDGRTGMHLVLLRPGESWVGWGP*HGCRWG
Trigger: CCCCCATCTGCAGCCATGGCATGGACCCCAACCCAC...CCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCATGCCTGTTCTTCCATCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCAATGGCCTGTTCCACATaGCCATTCCCAGCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWAMACST*PFPAPD
Trigger: ATCTGGCGCTGGGAATGGCCATGTGGAACAGGCCAT...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGCTCCCCCTCTGCAGTaGGCTCAGCTACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FFVPAPALLLPVDGACQLAPPLQ*AQLPEA
Trigger: AGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGAGC...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGCACCTGGGCTTGGCTaGGGTCTGTGGACATGGCCA +
Preference number: 4 (lower is better)
Translates to: FFVPAPALLLPVDGACQLAPGLG*GLWTWP
Trigger: TGGCCATGTCCACAGACCCCAGCCAAGCCCAGGTGC...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGACTGGCACCTGGGCTTaGCTGGGGTCTGTGGACATG +
Preference number: 4 (lower is better)
Translates to: SRSELPSLYLRLLCCCQLTGTWA*LGSVDM
Trigger: CATGTCCACAGACCCCAGCCAAGCCCAGGTGCCAGT...CAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCGAGGCCCCTTCAGACTaGTCCAGCCCTACTGGCACC +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCEAPSD*SSPTGT
Trigger: GGTGCCAGTAGGGCTGGACCAGTCTGAAGGGGCCTC...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGGTGCCTGTCAGCTGGTaGGCAGCCCTGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PQLVSGPGTLTCAWLTLQVPVSW*AALECG
Trigger: TCCACACTCCAGGGCTGCCCACCAGCTGACAGGCAC...CTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGCTACCAGAGGCTGCTaGGGCAGCCTCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEATRGC*GSLWHG
Trigger: GCCATGCCAGAGGCTGCCTCAGCAGCCTCTGGTAGC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp CCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTCAGAAGGTCCTGAGTaGTCACCGTCGGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PSLYLRLLCCCQLMVPVSSEGPE*SPSGRP
Trigger: AGGACGACCCGACGGTGATCACTCAGGACCTTCTGA...GCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGCTTGCCAACCTCTGCTaGTCGATGGAGACACACCCC +
Preference number: 4 (lower is better)
Translates to: SRSELPSLYLRLLCCCQLLANLC*SMETHP
Trigger: GGGGTGTGTCTCCATCGATCAGCAGAGGTTGGCAAG...CAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATGTGTGGCTCCCCCTCTaGAGTGGGCTCAGCTACCAG +
Preference number: 4 (lower is better)
Translates to: PCSVSGVQMLHDGGAHSHVWLPL*SGLSYQ
Trigger: CTGGTAGCTGAGCCCACTGCAGAGGGGGAGCCACAC...ATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGACAACTCCAGCCACTaGACCAGGCCTGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: ELPSLYLRLLCCCQLMVPDNSSH*TRPAMN
Trigger: GTTCATGGCAGGCCTGGTGCAGTGGCTGGAGTTGTC...AGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GAAAGAGGCCTGTGGAAATCCTGTACCTCCAGAGCTCCTGGGAGGAACCCGAGGTGTGGGCCAGGTGCTTaGCAACCTCTGCTGATCGAT +
Preference number: 4 (lower is better)
Translates to: ERGLWKSCTSRAPGRNPRCGPGA*QPLLID
Trigger: ATCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACA...CCTCGGGTTCCTCCCAGGAGCTCTGGAGGTACAGGATTTCCACAGGCCTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGGTCAGTCCAGCCCCGTaGTGGGGCCCTGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLVSPAP*WGPGSC
Trigger: GCAAGACCCAGGGCCCCAGCACGGGGCTGGACTGAC...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCAGGGAGGTCATGTaGCAAACGAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVSREVM*QTRTLA
Trigger: GGCCAGAGTCCTCGTTTGCCACATGACCTCCCTGCT...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCGCAGCTTCCCAAGGGTaGGCGTGTTCTCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVAASQG*ACSLLQ
Trigger: TTGGAGGAGAGAACACGCCCACCCTTGGGAAGCTGC...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGAGGGGAGAGCTGGTGTaGGAGCCTCAGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGERGELV*EPQAPE
Trigger: CTCTGGGGCCTGAGGCTCCCACACCAGCTCTCCCCT...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGGGCCTCTCTCTGTCTaGAGACAGGCTGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FFVPAPALLLPVDGACQLGPLSV*RQAAQV
Trigger: AACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCC...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCCAAACAGCGAGGTCATaGTGGCTATGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCQTARS*WLCRLL
Trigger: CAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTG...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACTGTTGGCGAGACCACTaGGGATGGTCTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHCWRDH*GWSPGH
Trigger: ATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACA...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCTGCACCTGGTTTTATTaGGGCCAGGGGAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVCTWFY*GQGRAG
Trigger: ACCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCA...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCACTGGGACAGGGAGATaGCACAGAGGGCAGCATAGG +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCTGTGR*HRGQHR
Trigger: CCTATGCTGCCCTCTGTGGCATCTCCCTGTCCCAGT...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGACTGGGACAGGGAGATaGCACAGAGGGCAGCATAGG +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVTGTGR*HRGQHR
Trigger: CCTATGCTGCCCTCTGTGGCATCTCCCTGTCCCAGT...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGCCACTGCACCAGGCCTaGCATGAACTCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SRSELPSLYLRLLCCCQLPLHQA*HELCAE
Trigger: TTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGG...CAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACGCCAATAATCGTCGCTaGTCCAGCGGCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHANNRR*SSGNKG
Trigger: CCCCTTGTTGCCGCTGGAGCAGCGACGATTATTGGC...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp ATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTCAGGCCAGGCAGTACTaGTCACGGCTGTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MRSTESPQLVSGPGTLTCQARQY*SRLWAR
Trigger: CCTGGCCCACAGCCGTGAGCAGTACTGCCTGGCCTG...ACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp TTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGTGGTCTCCAGGGCATTaGCGAGCTCCATCAGGTACT +
Preference number: 4 (lower is better)
Translates to: FVPAPALLLPVDGACQLVWSPGH*RAPSGT
Trigger: AGTACCTGATGGAGCTCGGCAATGCCCTGGAGACCA...CACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCTGTGGGCCAGGTGCTTaGCAACCTCTGCTGATCGAT +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVCGPGA*QPLLID
Trigger: ATCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACA...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCGCTGCACCGAGGATGTaGGGTACACGAAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVAAPRM*GTRNSA
Trigger: TGCTGAGTTTCGTGTACCGCACATCCTCGGTGCAGC...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCCGGCGACACGGAGCTaGACCGAGGATGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLPATRS*TEDVRY
Trigger: GTACCGCACATCCTCGGTGCAGCTCCGTGTCGCCGG...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TCAGCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGCCCAGCCTGGCTTGGTaGGGATGCCCACGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SACIHHALLVVSRCCMTGPSLAW*GCPRPS
Trigger: TGAAGGCCGTGGGCATCCGCACCAAGCCAGGCTGGG...CCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGACGGCTCAGGTCCCCTaGTGTGGTCAGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLTAQVP*CGQSSP
Trigger: GGGGCTGGACTGACCACAGCAGGGGACCTGAGCCGT...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp CCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGCGCCTGCTCTGTTGCTaGCAGTTGATGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PQLVSGPGTLTCAWLTLQRLLCC*QLMVPV
Trigger: GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCG...CTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCGCCTGCTCTGTTGCTaGCAGTTGATGGTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVRLLCC*QLMVPV
Trigger: GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCG...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGAGGCAGCCTCTGGCATaGCCTGTTCCACATGGCCAT +
Preference number: 4 (lower is better)
Translates to: PQLVSGPGTLTCAWLTLQRQPLA*PVPHGH
Trigger: ATGGCCATGTGGAACAGGCCATGCCAGAGGCTGCCT...CTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTGCTCCCCCTCTGCAGTaGGCTCAGCTACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LYRADLIGSPKSRSELPSAPPLQ*AQLPEA
Trigger: AGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGAGC...AGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTCATAGGCGAAGCGGTTaGCCTCAGTCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LYRADLIGSPKSRSELPSHRRSG*PQSAPG
Trigger: GCCGGGAGCTGACTGAGGCCAACCGCTTCGCCTATG...AGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTGGCAAACGAGGACTCTaGCCCGGGCGTCATAGTGCC +
Preference number: 4 (lower is better)
Translates to: LYRADLIGSPKSRSELPSGKRGL*PGRHSA
Trigger: GGCACTATGACGCCCGGGCCAGAGTCCTCGTTTGCC...AGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGGCAAACGAGGACTCTaGCCCGGGCGTCATAGTGCC +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEGKRGL*PGRHSA
Trigger: GGCACTATGACGCCCGGGCCAGAGTCCTCGTTTGCC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGAGCAGGGAGGTCATGTaGCAAACGAGGACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVSREVM*QTRTLA
Trigger: GGCCAGAGTCCTCGTTTGCCACATGACCTCCCTGCT...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGTACTTTAGGGCCTCCTaGGCCACCATGTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: FVPAPALLLPVDGACQLVYFRAS*ATMLAR
Trigger: TCTCGCCAACATGGTGGCCCAGGAGGCCCTAAAGTA...CACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GTGGATGGAAGAACAGGCATGCACCTGGTTTTATTGAGGCCAGGGGAGAGCTGGAAGGCTCCCAATGCTTaGCTTCTCCCTCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: VDGRTGMHLVLLRPGESWKAPNA*LLPPQA
Trigger: CGCCTGTGGAGGGAGAAGCCAAGCATTGGGAGCCTT...CCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCATGCCTGTTCTTCCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCTTCTCGTCCCAGCCTaGCTTGGTGCGGATGCCCAC +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGELLVPA*LGADAH
Trigger: GTGGGCATCCGCACCAAGCCAGGCTGGGACGAGAAG...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GAAAGAGGCCTGTGGAAATCCTGTACCTCCAGAGCTCCTGGGAGGAACCCGAGGTGGGGTCTGTGGACATaGCCAATTTGGAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ERGLWKSCTSRAPGRNPRWGLWT*PIWRCL
Trigger: GAGACACCTCCAAATTGGCCATGTCCACAGACCCCA...CCTCGGGTTCCTCCCAGGAGCTCTGGAGGTACAGGATTTCCACAGGCCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGAGCCCTACTGGCACCTaGGCTTGGCTGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGESPTGT*AWLGSV
Trigger: CACAGACCCCAGCCAAGCCCAGGTGCCAGTAGGGCT...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGGGCAGCCCAGTGGGTTaGGGTCCATGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YEKYRKPTVGFRSWDSNLGSPVG*GPCHGC
Trigger: GCAGCCATGGCATGGACCCCAACCCACTGGGCTGCC...CAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp GCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGAAAGCCCACAGTTaGTTTCCGGTCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: AAFFVPAPALLLPVDGACQKAHS*FPVLGL
Trigger: GAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTG...ACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp AGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACAGGGGAGAGCTGGTGTaGGAGCCTCAGGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: RADLIGSPKSRSELPSLYRGELV*EPQAPE
Trigger: CTCTGGGGCCTGAGGCTCCCACACCAGCTCTCCCCT...GTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCGCCCTGGAGTGTGGATaGAAGAACAGGCATGCACCT +
Preference number: 4 (lower is better)
Translates to: PSLYLRLLCCCQLMVPVSALECG*KNRHAP
Trigger: AGGTGCATGCCTGTTCTTCCATCCACACTCCAGGGC...GCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGGCAGCCCTGGAGTGTaGATGGAAGAACAGGCATGC +
Preference number: 4 (lower is better)
Translates to: PTVGFRSWDSNLCLVDSAGSPGV*MEEQAC
Trigger: GCATGCCTGTTCTTCCATCCACACTCCAGGGCTGCC...TGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGGCAGCCCTGGAGTGTaGATGGAAGAACAGGCATGC +
Preference number: 4 (lower is better)
Translates to: FFVPAPALLLPVDGACQLGSPGV*MEEQAC
Trigger: GCATGCCTGTTCTTCCATCCACACTCCAGGGCTGCC...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTCTTGCCAACCTCTGCTaGTCGATGGAGACACACCCC +
Preference number: 4 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTLANLC*SMETHP
Trigger: GGGGTGTGTCTCCATCGATCAGCAGAGGTTGGCAAG...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGTGGCAATCTTTCTCTTaGGCCATCTCCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWWQSFS*AISCRQ
Trigger: CTGTCTGCAGGAGATGGCTCAAGAGAAAGATTGCCA...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGTGCACCTGGTTTTATTaGGGCCAGGGGAGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVCTWFY*GQGRAG
Trigger: ACCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCA...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGTCTGTTGCTGCCAGTTaGTGGTGCCTGTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVSVAAS*WCLSAG
Trigger: ACCAGCTGACAGGCACCATCAACTGGCAGCAACAGA...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp GAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGGCCTCCTTGTAACATaGGGAGCCTGGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELPSLYLRLLCCCQLMVPGLLVT*GAWFFS
Trigger: GGAGAAAAACCAGGCTCCTCATGTTACAAGGAGGCC...AGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS-3UTR GCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTTGCCCCCTTCTGCCTaGTGTCACACGTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCLPPSA*CHTFQR
Trigger: TCTCTGGAACGTGTGACAGCAGGCAGAAGGGGGCAA...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGATGGTGATGTGCAGCTaGCTGCCCTCCGTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEMVMCS*LPSVRG
Trigger: GCCTCTGACGGAGGGCAGGCAGCTGCACATCACCAT...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACCGGAAAGGCTCCCAATaGTTGGCTTCTCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHRKGSQ*LASPST
Trigger: TGTGGAGGGAGAAGCCAAGCATTGGGAGCCTTTCCG...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCGCTGCACCGAGGATGTaGGGTACACGAAACTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCAAPRM*GTRNSA
Trigger: TGCTGAGTTTCGTGTACCGCACATCCTCGGTGCAGC...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTCCACCCTCCTGTCCTaGAGCAGCACGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: YEKYRKPTVGFRSWDSNLSTLLS*SSTGCR
Trigger: CCTACAGCCCGTGCTGCTGCAGGACAGGAGGGTGGA...CAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGTCCACCCTCCTGTCCTaGAGCAGCACGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLSTLLS*SSTGCR
Trigger: CCTACAGCCCGTGCTGCTGCAGGACAGGAGGGTGGA...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTCTGCGCCTGCTCTGTTaGTGCCAGTTGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTLRLLC*CQLMVP
Trigger: AGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAG...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGAGAGCAGGAGTGAGCTaGCTTCTTTGTACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVRAGVS*LLCTCA
Trigger: GGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCT...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTACATGGCTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGGTTTGCCCAACCTGGTaGGGGGTCTCGCCTGATGAG +
Preference number: 4 (lower is better)
Translates to: PTWLYRADLIGSPKSRSEVCPTW*GVSPDE
Trigger: CTCATCAGGCGAGACCCCCCACCAGGTTGGGCAAAC...CTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CCTACATGGCTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCCGGATATGGGACCCTaGGTTTGCCCAACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PTWLYRADLIGSPKSRSEPDMGP*VCPTWW
Trigger: CCACCAGGTTGGGCAAACCCAGGGTCCCATATCCGG...CTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATGCTGCATATGGAGACTaGGGAAGACGGCTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCSVSGVQMLHDGGAHSHAAYGD*GRRLRS
Trigger: GGACCTGAGCCGTCTTCCCCAGTCTCCATATGCAGC...ATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCGCCCTGGAGTGTGGATaGAAGAACAGGCATGCACCT +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCALECG*KNRHAP
Trigger: AGGTGCATGCCTGTTCTTCCATCCACACTCCAGGGC...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTGGGCACCAGAAGACATaGCCTCCTTGTAACATGAGG +
Preference number: 4 (lower is better)
Translates to: AAFFVPAPALLLPVDGACGHQKT*PPCNMR
Trigger: CCTCATGTTACAAGGAGGCCATGTCTTCTGGTGCCC...ACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS-3UTR TCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCTCAGAGGCAGAAACGTaGACTCTTCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVSEAET*TLQWLP
Trigger: TGGGAGCCATTGAAGAGTTCACGTTTCTGCCTCTGA...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp CCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGCAATCTTTCTCTTaGGCCATCTCCTGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PSLYLRLLCCCQLMVPVSWQSFS*AISCRQ
Trigger: CTGTCTGCAGGAGATGGCTCAAGAGAAAGATTGCCA...GCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGCAGACTCCAAAGCTATaGGAAGTACAGAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWQTPKL*EVQKAH
Trigger: GTGGGCTTTCTGTACTTCTCATAGCTTTGGAGTCTG...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp GGATGGAAGAACAGGCATGCACCTGGTTTTATTGAGGCCAGGGGAGAGCTGGTGCAAATTGCCCCCTTCTaGCTGCTGTCACACGTTCCA +
Preference number: 4 (lower is better)
Translates to: GWKNRHAPGFIEARGELVQIAPF*LLSHVP
Trigger: TGGAACGTGTGACAGCAGGCAGAAGGGGGCAATTTG...CACCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCATGCCTGTTCTTCCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGACAACTCCAGCCACTaGACCAGGCCTGCCATGAAC +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEDNSSH*TRPAMN
Trigger: GTTCATGGCAGGCCTGGTGCAGTGGCTGGAGTTGTC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCTCAGGGCAGCCACAATaGCAGACAACACTGTGTACT +
Preference number: 4 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVSGQPQ*QTTLCT
Trigger: AGTACACAGTGTTGTCTGGCATTGTGGCTGCCCTGA...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTAGGATGTGGGCCAGGTaGTTGCCAACCTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTRMWAR*LPTSAD
Trigger: ATCAGCAGAGGTTGGCAAGCACCTGGCCCACATCCT...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGTTCCAATTCCTTCCATTTAGGAAAGAGGCCTGTGGAAATCCTGTACCTCCAGTGGGGCCCTGGGTCTTaGAGGCACAATCGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSNSFHLGKRPVEILYLQWGPGS*RHNRGS
Trigger: GCTGCCCCGATTGTGCCTGCAAGACCCAGGGCCCCA...CTGGAGGTACAGGATTTCCACAGGCCTCTTTCCTAAATGGAAGGAATTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp GCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGGGTTCAGGAAATAACTaGGACAGGGAGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: AFFVPAPALLLPVDGACQGSGNN*DREMPQ
Trigger: CTGTGGCATCTCCCTGTCCCAGTTATTTCCTGAACC...CTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCGTTGGTTTCCGGTCCTaGGACTCTAACCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCVGFRS*DSNLCL
Trigger: CAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAAC...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGTGCCCATCCTTGAGTaGGAAGCTCAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEVPILE*EAQKVL
Trigger: CAGGACCTTCTGAGCTTCTCACTCAAGGATGGGCAC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCAAACAGCGAGGTCATaGTGGCTATGCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLQTARS*WLCRLL
Trigger: CAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTG...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp AGTTCCAATTCCTTCCATTTAGGAAAGAGGCCTGTGGAAATCCTGTACCTCCAGCAGCCCACGGGGCACTaGAGGTGCGGTATTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSNSFHLGKRPVEILYLQQPTGH*RCGICQ
Trigger: CTGGCAAATACCGCACCTTCAGTGCCCCGTGGGCTG...CTGGAGGTACAGGATTTCCACAGGCCTCTTTCCTAAATGGAAGGAATTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp AGCTATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACTGTTGGCGAGACCACTaGGGATGGTCTCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SYEKYRKPTVGFRSWDSNCWRDH*GWSPGH
Trigger: ATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACA...GTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGTCTGAAGACAGGCTaGTCAGGTTCTGGATGGTTC +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCCLKTG*SGSGWF
Trigger: GAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACA...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGGCCAATAATCGTCGCTaGTCCAGCGGCAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLANNRR*SSGNKG
Trigger: CCCCTTGTTGCCGCTGGAGCAGCGACGATTATTGGC...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CAAAGCTATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTCAGGCCAGCTCCAGCTaGACCAAACAGCGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QSYEKYRKPTVGFRSWDSQASSS*TKQRGH
Trigger: ATGACCTCGCTGTTTGGTGCAGCTGGAGCTGGCCTG...AGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATAGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp CCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGCTTGGTTGACTCTGCAGTCAGGGCAGCCACAATaGCAGACAACACTGTGTACT +
Preference number: 4 (lower is better)
Translates to: PQLVSGPGTLTCAWLTLQSGQPQ*QTTLCT
Trigger: AGTACACAGTGTTGTCTGGCATTGTGGCTGCCCTGA...CTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp CCTACATGGCTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGATGGCCTGTTCCACATaGCCATTCCCAGCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PTWLYRADLIGSPKSRSEMACST*PFPAPD
Trigger: ATCTGGCGCTGGGAATGGCCATGTGGAACAGGCCAT...CTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCAGGTCGTCCTTCAAGATaGGGTCCTTCAGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWAGRPSR*GPSVKF
Trigger: AAATTTTACTGAAGGACCCCATCTTGAAGGACGACC...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCCACGGCCTTCAGGATaGCATCCATCTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEPRPSG*HPSAWH
Trigger: ATGCCAAGCAGATGGATGCCATCCTGAAGGCCGTGG...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTACATGGCTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGTACCTCCAGAGCTCCTaGGAGGAACCCGAGGGTATA +
Preference number: 4 (lower is better)
Translates to: PTWLYRADLIGSPKSRSEYLQSS*EEPEGI
Trigger: TATACCCTCGGGTTCCTCCCAGGAGCTCTGGAGGTA...CTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
3UTR CAA 72 bp ATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTaGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATG +
Preference number: 4 (lower is better)
Translates to: IGSPKSRSELPS*YLRLLCCCQLM
Trigger: CATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp ATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGTGTGCCCATCCTTGAGTaGGAAGCTCAGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MRSTESPQLVSGPGTLTCVPILE*EAQKVL
Trigger: CAGGACCTTCTGAGCTTCTCACTCAAGGATGGGCAC...ACAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp TCAGCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGTCTGTTGCTGCCAGTTaGTGGTGCCTGTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SACIHHALLVVSRCCMTGSVAAS*WCLSAG
Trigger: ACCAGCTGACAGGCACCATCAACTGGCAGCAACAGA...CCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCCACTGCACCAGGCCTaGCATGAACTCTGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLPLHQA*HELCAE
Trigger: TTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGG...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp ATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCAAGGATGTGGGCCAGGTaGTTGCCAACCTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: MYSPCSVSGVQMLHDGGARMWAR*LPTSAD
Trigger: ATCAGCAGAGGTTGGCAAGCACCTGGCCCACATCCT...TGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCGGAAAGGCTCCCAATaGTTGGCTTCTCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RADLIGSPKSRSELPSLYRKGSQ*LASPST
Trigger: TGTGGAGGGAGAAGCCAAGCATTGGGAGCCTTTCCG...GTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTCCCAGCCTGGCTTGGTaGGGATGCCCACGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PATGNSFHVKFILVPRPSPSLAW*GCPRPS
Trigger: TGAAGGCCGTGGGCATCCGCACCAAGCCAGGCTGGG...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGGGACTCTAACCTGTaGTTGGTTGACTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PCSVSGVQMLHDGGAHSHWDSNL*LVDSAG
Trigger: ACCTGCAGAGTCAACCAAGCACAGGTTAGAGTCCCA...ATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp TCAGCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGAGAGCAGGAGTGAGCTaGCTTCTTTGTACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SACIHHALLVVSRCCMTGRAGVS*LLCTCA
Trigger: GGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCT...CCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGTACTTTAGGGCCTCCTaGGCCACCATGTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLYFRAS*ATMLAR
Trigger: TCTCGCCAACATGGTGGCCCAGGAGGCCCTAAAGTA...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGCCACGGCCTTCAGGATaGCATCCATCTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: YEKYRKPTVGFRSWDSNLPRPSG*HPSAWH
Trigger: ATGCCAAGCAGATGGATGCCATCCTGAAGGCCGTGG...CAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACTTTCTTCTTTCGGGATaGCTCGGCCATTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHFLLSG*LGHFRF
Trigger: GAATCTGAAATGGCCGAGGCATCCCGAAAGAAGAAA...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGAGCATGTATTCACCATaGTCTGTTAGTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVSMYSP*SVSGVQ
Trigger: CTGGACACCACTAACAGAGCATGGTGAATACATGCT...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGGTTCAGGAAATAACTaGGACAGGGAGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEGSGNN*DREMPQ
Trigger: CTGTGGCATCTCCCTGTCCCAGTTATTTCCTGAACC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCAGGTCCCCTGCTGTaGTCAGTCCAGCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PATGNSFHVKFILVPRPSSGPLL*SVQPRA
Trigger: AGCACGGGGCTGGACTGACCACAGCAGGGGACCTGA...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp AGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACTGTCTGAAGACAGGCTaGTCAGGTTCTGGATGGTTC +
Preference number: 4 (lower is better)
Translates to: RADLIGSPKSRSELPSLYCLKTG*SGSGWF
Trigger: GAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACA...GTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp CTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTGGTATAAGAGAGAGCTaGATATGGAGACTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LYRADLIGSPKSRSELPSGIRES*IWRLGK
Trigger: CTTCCCCAGTCTCCATATGCAGCTCTCTCTTATACC...AGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp TTCTTGTCCCCAGGCCTAGTTCACAGCCATACTGAATGCAATTCAGCATGTATTCTGCGCCTGCTCTGTTaGTGCCAGTTGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: FLSPGLVHSHTECNSACILRLLC*CQLMVP
Trigger: AGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAG...AATACATGCTGAATTGCATTCAGTATGGCTGTGAACTAGGCCTGGGGACAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp AGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: SGVQMLHDGGAHSHCVCVRLLRF*MVLWRN
Trigger: ATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCT...CACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCAAAAGCAGTCATGGTTaGCAAGACAGCTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCKSSHG*QDSFRQ
Trigger: TTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTT...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp AGTTCCAATTCCTTCCATTTAGGAAAGAGGCCTGTGGAAATCCTGTACCTCCAGAGGTGTCTCCGGATATaGGACCCTGGGTTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSNSFHLGKRPVEILYLQRCLRI*DPGFAQ
Trigger: TTGGGCAAACCCAGGGTCCCATATCCGGAGACACCT...CTGGAGGTACAGGATTTCCACAGGCCTCTTTCCTAAATGGAAGGAATTGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CCA 90 bp AGCTATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACTGGACATGGCCAATTTaGAGGTGTCTCCGGATATGG +
Preference number: 4 (lower is better)
Translates to: SYEKYRKPTVGFRSWDSNWTWPI*RCLRIW
Trigger: CCATATCCGGAGACACCTCCAAATTGGCCATGTCCA...GTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTCAGGCCAGCTCCAGCTaGACCAAACAGCGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PATGNSFHVKFILVPRPSQASSS*TKQRGH
Trigger: ATGACCTCGCTGTTTGGTGCAGCTGGAGCTGGCCTG...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp TCCTTCCATTTAGGAAAGAGGCCTGTGGAAATCCTGTACCTCCAGAGCTCCTGGAGCATGTATTCACCATaGTCTGTTAGTGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SFHLGKRPVEILYLQSSWSMYSP*SVSGVQ
Trigger: CTGGACACCACTAACAGAGCATGGTGAATACATGCT...CCAGGAGCTCTGGAGGTACAGGATTTCCACAGGCCTCTTTCCTAAATGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTTATCCCCTCTGTTCCTaGTACAGGAAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTYPLCS*YRKFFP
Trigger: TGGAAAGAATTTCCTGTAGCAGGAACAGAGGGGATA...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGTCGCAAAAGCAGTCATaGTTGGCAAGACAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLSQKQS*LARQLQ
Trigger: CTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGA...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTAAGGCTCCCAATGCTTaGCTTCTCCCTCCACAGGCG +
Preference number: 4 (lower is better)
Translates to: PATGNSFHVKFILVPRPSKAPNA*LLPPQA
Trigger: CGCCTGTGGAGGGAGAAGCCAAGCATTGGGAGCCTT...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR GCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGTTTCTTCTTTCGGGATaGCTCGGCCATTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLFLLSG*LGHFRF
Trigger: GAATCTGAAATGGCCGAGGCATCCCGAAAGAAGAAA...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLRLLRF*MVLWRN
Trigger: ATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCT...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGGTCGTCCTTCAAGATaGGGTCCTTCAGTAAAATTT +
Preference number: 4 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEGRPSR*GPSVKF
Trigger: AAATTTTACTGAAGGACCCCATCTTGAAGGACGACC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp AGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACAAAAGCAGTCATGGTTaGCAAGACAGCTTCAGACAA +
Preference number: 4 (lower is better)
Translates to: RADLIGSPKSRSELPSLYKSSHG*QDSFRQ
Trigger: TTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTT...GTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCACTTGGCTGGGGTCTGTaGACATGGCCAATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSLGWGL*TWPIWR
Trigger: CCTCCAAATTGGCCATGTCCACAGACCCCAGCCAAG...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR TCA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGAGTTCACAGCCATACTaGATGCAATTCAGCATGTAT +
Preference number: 4 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLSSQPY*MQFSMY
Trigger: ATACATGCTGAATTGCATTCAGTATGGCTGTGAACT...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCATCAGAGGCAGAAACGTaGACTCTTCAATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSSEAET*TLQWLP
Trigger: TGGGAGCCATTGAAGAGTTCACGTTTCTGCCTCTGA...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTACTCTAACCTGTGCTTaGTTGACTCTGCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PATGNSFHVKFILVPRPSTLTCA*LTLQVS
Trigger: AGAGACCTGCAGAGTCAACCAAGCACAGGTTAGAGT...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR GCA 90 bp TTCTTGTCCCCAGGCCTAGTTCACAGCCATACTGAATGCAATTCAGCATGTATTTATCCCCTCTGTTCCTaGTACAGGAAATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FLSPGLVHSHTECNSACIYPLCS*YRKFFP
Trigger: TGGAAAGAATTTCCTGTAGCAGGAACAGAGGGGATA...AATACATGCTGAATTGCATTCAGTATGGCTGTGAACTAGGCCTGGGGACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CCA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCATCGCAAAAGCAGTCATaGTTGGCAAGACAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSSQKQS*LARQLQ
Trigger: CTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGA...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR TCA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCAAGTTCACAGCCATACTaGATGCAATTCAGCATGTAT +
Preference number: 4 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSSSQPY*MQFSMY
Trigger: ATACATGCTGAATTGCATTCAGTATGGCTGTGAACT...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS CCA 90 bp GGCGAAGCGGTTGGCCTCAGTCAGCTCCCGGCCCGTGGGCAGGTGTaGCTCCCCCTCTGCAGTGGGCTCAGCTACCAGAGGCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GEAVGLSQLPARGQV*LPLCSGLSYQRLLR
Trigger: CCTCAGCAGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGAGCCACACCTGCCCACGGGCCGGGAGCTGACTGAGGCCAACCGCTTCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS TCA 90 bp AGGTGCCTGTCAGGCCAGCTCCAGCTGCACCAAACAGCGAGGTCATaGTGGCTATGCCGGCTGCTGAGCCCAGAGCCGCTGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: RCLSGQLQLHQTARS*WLCRLLSPEPLPRR
Trigger: GCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGCTGGAGCTGGCCTGACAGGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489135.5
CDS GCA 90 bp CCGCTGACCACAGAGGTCAGGTCCACGTTCTCCACCCTCCTGTCCTaGAGCAGCACGGGCTGTAGGCCGGCGACACGGAGCTGCACCGAG +
Preference number: 5 (lower is better)
Translates to: PLTTEVRSTFSTLLS*SSTGCRPATRSCTE
Trigger: CTCGGTGCAGCTCCGTGTCGCCGGCCTACAGCCCGTGCTGCTGCAGGACAGGAGGGTGGAGAACGTGGACCTGACCTCTGTGGTCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS CCA 90 bp GGGCAGGCAGCCTGGGGCCAGCAAGAGCCCCTTCTCGTCCCAGCCTaGCTTGGTGCGGATGCCCACGGCCTTCAGGATGGCATCCATCTG +
Preference number: 5 (lower is better)
Translates to: GQAAWGQQEPLLVPA*LGADAHGLQDGIHL
Trigger: CAGATGGATGCCATCCTGAAGGCCGTGGGCATCCGCACCAAGCCAGGCTGGGACGAGAAGGGGCTCTTGCTGGCCCCAGGCTGCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS CCA 90 bp TTGGAGGTGTCTCCGGATATGGGACCCTGGGTTTGCCCAACCTGGTaGGGGGTCTCGCCTGATGAGGCGGCAGCTGCTGCCTGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: LEVSPDMGPWVCPTW*GVSPDEAAAAAWRG
Trigger: GCCTCGCCAGGCAGCAGCTGCCGCCTCATCAGGCGAGACCCCCCACCAGGTTGGGCAAACCCAGGGTCCCATATCCGGAGACACCTCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS TCA 90 bp TGTATCCTGTCAGGCCAGCTCCAGCTGCACCAAACAGCGAGGTCATaGTGGCTATGCCGGCTGCTGAGCCCAGAGCCGCTGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: CILSGQLQLHQTARS*WLCRLLSPEPLPRR
Trigger: GCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGCTGGAGCTGGCCTGACAGGATACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp GCAGCACGGGCTGTAGGCCGGCGACACGGAGCTGCACCGAGGATGTaGGGTACACGAAACTCAGCAGCCAGTCTCCCCTGCAGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: AARAVGRRHGAAPRM*GTRNSAASLPCSSR
Trigger: ACGGCTACTGCAGGGGAGACTGGCTGCTGAGTTTCGTGTACCGCACATCCTCGGTGCAGCTCCGTGTCGCCGGCCTACAGCCCGTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS GCA 90 bp CTCCTGTCCTGCAGCAGCACGGGCTGTAGGCCGGCGACACGGAGCTaGACCGAGGATGTGCGGTACACGAAACTCAGCAGCCAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LLSCSSTGCRPATRS*TEDVRYTKLSSQSP
Trigger: GGGAGACTGGCTGCTGAGTTTCGTGTACCGCACATCCTCGGTGCAGCTCCGTGTCGCCGGCCTACAGCCCGTGCTGCTGCAGGACAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS TCA 90 bp TCCAGCTGCACCAAACAGCGAGGTCATGATGGCTATGCCGGCTGCTaGGCCCAGAGCCGCTGCCCCGGCGCTGCCAATAATCGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: SSCTKQRGHDGYAGC*AQSRCPGAANNRRC
Trigger: GCAGCGACGATTATTGGCAGCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS-3UTR CAA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCACTGGGGCCCTGGGTCTaGCAGGCACAATCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWALGPWV*QAQSGQ
Trigger: CTGCCCCGATTGTGCCTGCAAGACCCAGGGCCCCAG...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CAA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGGGCAGCCCAGTGGGTaGGGGTCCATGCCATGGCTG +
Preference number: 5 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWGQPSG*GSMPWL
Trigger: CAGCCATGGCATGGACCCCAACCCACTGGGCTGCCC...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS GCA 90 bp CCTCATCAGCAGCCCCGGTTTATAATGTACAACACTGGAGGCGGCTaGGAAGGCAAAGGCGGAGGCGGCAAAACCGGCGAGCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PHQQPRFIMYNTGGG*EGKGGGGKTGERLL
Trigger: GAGGAGCCGCTCGCCGGTTTTGCCGCCTCCGCCTTTGCCTTCGCAGCCGCCTCCAGTGTTGTACATTATAAACCGGGGCTGCTGATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000488449.1
CDS GCA 90 bp CCGTTGATGATCCTCCCGGACACCACCTTCCGGAAAGGCTCCCAATaGTTGGCTTCTCCCTCCACAGGCGCACCCAGCAGGATGACGTCC +
Preference number: 5 (lower is better)
Translates to: PLMILPDTTFRKGSQ*LASPSTGAPSRMTS
Trigger: GGACGTCATCCTGCTGGGTGCGCCTGTGGAGGGAGAAGCCAAGCATTGGGAGCCTTTCCGGAAGGTGGTGTCCGGGAGGATCATCAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
ENST00000494342.1
CDS CCA 90 bp CAGACTGGTCCAGCCCTACTGGCACCTGGGCTTGGCTGGGGTCTGTaGACATGGCCAATTTGGAGGTGTCTCCGGATATGGGACCCTGGG +
Preference number: 5 (lower is better)
Translates to: QTGPALLAPGLGWGL*TWPIWRCLRIWDPG
Trigger: CCCAGGGTCCCATATCCGGAGACACCTCCAAATTGGCCATGTCCACAGACCCCAGCCAAGCCCAGGTGCCAGTAGGGCTGGACCAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS-3UTR CAA 90 bp TACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGGCAAGCTCCATCAGGTACTaGGCTTCCCAGGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: YLRLLCCCQLMVPVSWWASSIRY*ASQARQ
Trigger: CTGCCTGGCCTGGGAAGCCAAGTACCTGATGGAGCT...TGCCCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp TTGCCAGAAGCGAGCCACCCCGTGACGGCGATGGTGATGTGCAGCTaGCTGCCCTCCGTCAGAGGCAGAAACGTGAACTCTTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: LPEASHPVTAMVMCS*LPSVRGRNVNSSMA
Trigger: AGCCATTGAAGAGTTCACGTTTCTGCCTCTGACGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGCTTCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp CGGTATTTGCCAGAAGCGAGCCACCCCGTGACGGCGATGGTGATGTaGAGCTGCCTGCCCTCCGTCAGAGGCAGAAACGTGAACTCTTCA +
Preference number: 5 (lower is better)
Translates to: RYLPEASHPVTAMVM*SCLPSVRGRNVNSS
Trigger: TGAAGAGTTCACGTTTCTGCCTCTGACGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGCTTCTGGCAAATACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS CCA 90 bp CAGAGCTCCTGGGAGGAACCCGAGGGTATAAGAGAGAGCTGCATATaGAGACTGGGGAAGACGGCTCAGGTCCCCTGCTGTGGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: QSSWEEPEGIRESCI*RLGKTAQVPCCGQS
Trigger: GGACTGACCACAGCAGGGGACCTGAGCCGTCTTCCCCAGTCTCCATATGCAGCTCTCTCTTATACCCTCGGGTTCCTCCCAGGAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS-3UTR CAA 90 bp CTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTCGTCCCAGCCTGGCTaGGTGCGGATGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: LYRADLIGSPKSRSELPSSSQPG*VRMPTA
Trigger: GGCCGTGGGCATCCGCACCAAGCCAGGCTGGGACGA...AGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp TACCTCCAGAGCTCCTGGGAGGAACCCGAGGGTATAAGAGAGAGCTaGATATGGAGACTGGGGAAGACGGCTCAGGTCCCCTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: YLQSSWEEPEGIRES*IWRLGKTAQVPCCG
Trigger: ACCACAGCAGGGGACCTGAGCCGTCTTCCCCAGTCTCCATATGCAGCTCTCTCTTATACCCTCGGGTTCCTCCCAGGAGCTCTGGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS CCA 90 bp ATCTGCTCCTTCACCTCCCAGGCCGCTCGCAAAAGCAGTCATGGTTaGCAAGACAGCTTCAGACAACTCCAGCCACTGCACCAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ICSFTSQAARKSSHG*QDSFRQLQPLHQAC
Trigger: GCAGGCCTGGTGCAGTGGCTGGAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS-3UTR CAA 90 bp TTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGCTGAAGGTGCGGTATTaGCCAGAAGCGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: FVPAPALLLPVDGACQLVLKVRY*PEASHP
Trigger: GGGGTGGCTCGCTTCTGGCAAATACCGCACCTTCAG...CACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp TCAGCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGTCGTCCCAGCCTGGCTaGGTGCGGATGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SACIHHALLVVSRCCMTGSSQPG*VRMPTA
Trigger: GGCCGTGGGCATCCGCACCAAGCCAGGCTGGGACGA...CCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp TTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGGTGGCTCTGTTGCTGCCAGTaGATGGTGCCTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LYLRLLCCCQLMVPVSWWLCCCQ*MVPVSW
Trigger: CCAGCTGACAGGCACCATCAACTGGCAGCAACAGAG...CCACCAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS CCA 90 bp ACACATCTGCTCCTTCACCTCCCAGGCCGCTCGCAAAAGCAGTCATaGTTGGCAAGACAGCTTCAGACAACTCCAGCCACTGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: THLLLHLPGRSQKQS*LARQLQTTPATAPG
Trigger: GCCTGGTGCAGTGGCTGGAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS-3UTR CAA 90 bp TTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCAGCTGTCCTGGGCCACCATGTaGGCGAGACCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: FFVPAPALLLPVDGACQLSWATM*ARPLRM
Trigger: CATCCTCAGTGGTCTCGCCAACATGGTGGCCCAGGA...CAGCTGACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp AGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGCCTGCGCCTGCTCTGTaGCTGCCAGTTGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: SGVQMLHDGGAHSHCVCVPAPAL*LPVDGA
Trigger: GGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGG...CACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp CTGAAGACAGGCTGCTCAGGTTCTGGATGGTTCTTTGGAGAAATATaGAAATTGCCCTGGAGGCGGCTGCGAAGGCAAAGGCGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LKTGCSGSGWFFGEI*KLPWRRLRRQRRRR
Trigger: CCGCCTCCGCCTTTGCCTTCGCAGCCGCCTCCAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS-3UTR CAA 90 bp AGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGATGGTCTCCAGGGCATaGCCGAGCTCCATCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SELPSLYLRLLCCCQLMVMVSRA*PSSIRY
Trigger: GTACCTGATGGAGCTCGGCAATGCCCTGGAGACCAT...CACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCATGTGGGCCAGGTGCTaGCCAACCTCTGCTGATCGA +
Preference number: 5 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCMWARC*PTSADR
Trigger: TCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACAT...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp AGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGTACTGGCACCTGGGCTaGGCTGGGGTCTGTGGACAT +
Preference number: 5 (lower is better)
Translates to: SGVQMLHDGGAHSHCVCVYWHLG*AGVCGH
Trigger: ATGTCCACAGACCCCAGCCAAGCCCAGGTGCCAGTA...CACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS TCA 90 bp GTAACTTCAGGCATGGGCACCAGAAGACATGGCCTCCTTGTAACATaGGGAGCCTGGTTTTTCTCCAGAGGCTCCCCAAGCCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: VTSGMGTRRHGLLVT*GAWFFSRGSPSPPG
Trigger: TCCAGGAGGGCTTGGGGAGCCTCTGGAGAAAAACCAGGCTCCTCATGTTACAAGGAGGCCATGTCTTCTGGTGCCCATGCCTGAAGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS GCA 90 bp GGTTGGCAAGACAGCTTCAGACAACTCCAGCCACTGCACCAGGCCTaGCATGAACTCTGTGCAGAAGGAGCTGTGTTCGGGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GWQDSFRQLQPLHQA*HELCAEGAVFGFRK
Trigger: TTTCCTGAACCCGAACACAGCTCCTTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGGCTGGAGTTGTCTGAAGCTGTCTTGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS CCA 90 bp CCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCTGGAGGCGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: PWASLCLKTGCSGSG*FFGEICKLPWRRLR
Trigger: TCGCAGCCGCCTCCAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS-3UTR CAA 90 bp TCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCATGCACCTGGTTTTATaGAGGCCAGGGGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SPKSRSELPSLYLRLLCCMHLVL*RPGESW
Trigger: CCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCAT...GCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGCCTGCGCCTGCTCTGTaGCTGCCAGTTGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLPAPAL*LPVDGA
Trigger: GGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGG...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACAGTGAGCTGCCTTCTTaGTACCTGCGCCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: HHALLVVSRCCMTGEHTHSELPS*YLRLLC
Trigger: ACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT...GTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp AGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGAGTGGTGTCCAGATGTaGCATGACGGGGGAGCACAC +
Preference number: 5 (lower is better)
Translates to: SGVQMLHDGGAHSHCVCVSGVQM*HDGGAH
Trigger: GTGTGCTCCCCCGTCATGCAACATCTGGACACCACT...CACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp AAAGCAGTCATGGTTGGCAAGACAGCTTCAGACAACTCCAGCCACTaGACCAGGCCTGCCATGAACTCTGTGCAGAAGGAGCTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: KAVMVGKTASDNSSH*TRPAMNSVQKELCS
Trigger: CGAACACAGCTCCTTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGGCTGGAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS CCA 90 bp ACAGCCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCTGGAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: TAVGLSLSEDRLLRF*MVLWRNMQIALEAA
Trigger: AGCCGCCTCCAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS-3UTR CAA 90 bp GAAAGAGGCCTGTGGAAATCCTGTACCTCCAGAGCTCCTGGGAGGAACCCGAGGCAAAAGCAGTCATGGTaGGCAAGACAGCTTCAGACA +
Preference number: 5 (lower is better)
Translates to: ERGLWKSCTSRAPGRNPRQKQSW*ARQLQT
Trigger: TGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTG...CCTCGGGTTCCTCCCAGGAGCTCTGGAGGTACAGGATTTCCACAGGCCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CAA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGATGGTCTCCAGGGCATaGCCGAGCTCCATCAGGTAC +
Preference number: 5 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEMVSRA*PSSIRY
Trigger: GTACCTGATGGAGCTCGGCAATGCCCTGGAGACCAT...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CAAAGCTATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTTCCTGGGCCACCATGTaGGCGAGACCACTGAGGATG +
Preference number: 5 (lower is better)
Translates to: QSYEKYRKPTVGFRSWDSSWATM*ARPLRM
Trigger: CATCCTCAGTGGTCTCGCCAACATGGTGGCCCAGGA...AGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATAGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS TCA 90 bp GGCCACATTGGGTGCTGGGAGGGACTCCAACAGCAGTGGAGGAGATaGATGTCACACACATACACATGCACACACGTGAACGTGGACAAT +
Preference number: 5 (lower is better)
Translates to: GHIGCWEGLQQQWRR*MSHTYTCTHVNVDN
Trigger: ATTGTCCACGTTCACGTGTGTGCATGTGTATGTGTGTGACATTCATCTCCTCCACTGCTGTTGGAGTCCCTCCCAGCACCCAATGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494342.1
CDS CCA 90 bp CCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCCCTTCTGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: PWASLCLKTGCSGSG*FFGEICKLPPSACC
Trigger: ACAGCAGGCAGAAGGGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS CCA 90 bp ACAGCCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCCCTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: TAVGLSLSEDRLLRF*MVLWRNMQIAPFCL
Trigger: CAGGCAGAAGGGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CAA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGGGGTTGTCGATGACATaGGCGACACTGAGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ACIHHALLVVSRCCMTGEGLSMT*ATLRSE
Trigger: CTCACTCCTCAGTGTCGCCAATGTCATCGACAACCC...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGATGTGGGCCAGGTGCTaGCCAACCTCTGCTGATCGA +
Preference number: 5 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLMWARC*PTSADR
Trigger: TCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACAT...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCTTGGCAATCTTTCTCTaGAGCCATCTCCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVLAIFL*SHLLQT
Trigger: TGTCTGCAGGAGATGGCTCAAGAGAAAGATTGCCAA...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GCTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTTTGGCAATCTTTCTCTaGAGCCATCTCCTGCAGACA +
Preference number: 5 (lower is better)
Translates to: AAFFVPAPALLLPVDGACLAIFL*SHLLQT
Trigger: TGTCTGCAGGAGATGGCTCAAGAGAAAGATTGCCAA...ACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTGTGGACATGGCCAATTaGGAGGTGTCTCCGGATATG +
Preference number: 5 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTVDMAN*EVSPDM
Trigger: CATATCCGGAGACACCTCCAAATTGGCCATGTCCAC...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CAA 90 bp GCATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGAGTGAGCTGCCTTCTTaGTACCTGCGCCTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: ACIHHALLVVSRCCMTGESELPS*YLRLLC
Trigger: ACAGAGCAGGCGCAGGTACAAAGAAGGCAGCTCACT...CTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS CCA 90 bp CCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCTCTCTGAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PWASLCLKTGCSGSG*FFGEICKLPSLSLS
Trigger: ACTGAGGCTCAGAGAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS CCA 90 bp ACAGCCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCTCTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TAVGLSLSEDRLLRF*MVLWRNMQIALSEP
Trigger: AGGCTCAGAGAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS-3UTR CAA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTGGAGAAATATGCAAATaGCCCCCTTCTGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTGEICK*PPSACC
Trigger: ACAGCAGGCAGAAGGGGGCAATTTGCATATTTCTCC...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CAA 90 bp AGTTCCAATTCCTTCCATTTAGGAAAGAGGCCTGTGGAAATCCTGTACCTCCAGCTGAAGGTGCGGTATTaGCCAGAAGCGAGCCACCCC +
Preference number: 5 (lower is better)
Translates to: SSNSFHLGKRPVEILYLQLKVRY*PEASHP
Trigger: GGGGTGGCTCGCTTCTGGCAAATACCGCACCTTCAG...CTGGAGGTACAGGATTTCCACAGGCCTCTTTCCTAAATGGAAGGAATTGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS-3UTR CAA 90 bp ATGTATTCACCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCAGGGTTGTCGATGACATaGGCGACACTGAGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: MYSPCSVSGVQMLHDGGAGLSMT*ATLRSE
Trigger: CTCACTCCTCAGTGTCGCCAATGTCATCGACAACCC...TGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGGTGAATACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp TATGAGAAGTACAGAAAGCCCACAGTTGGTTTCCGGTCCTGGGACTCTAACCTGATGCACCTGGTTTTATaGAGGCCAGGGGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: YEKYRKPTVGFRSWDSNLMHLVL*RPGESW
Trigger: CCAGCTCTCCCCTGGCCTCAATAAAACCAGGTGCAT...CAGGTTAGAGTCCCAGGACCGGAAACCAACTGTGGGCTTTCTGTACTTCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS TCA 90 bp ATCACCGTCGGGTCGTCCTTCAAGATGGGGTCCTTCAGTAAAATTTaGACAAACACATCTGCTCCTTCACCTCCCAGGCCGCTCGCAAAA +
Preference number: 5 (lower is better)
Translates to: ITVGSSFKMGSFSKI*TNTSAPSPPRPLAK
Trigger: TTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGATGTGTTTGTTCAAATTTTACTGAAGGACCCCATCTTGAAGGACGACCCGACGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000462171.1
ENST00000489135.5
ENST00000496528.5
CDS CCA 90 bp GTAATTCTTCCCTCCTGTAACTTCAGGCATGGGCACCAGAAGACATaGCCTCCTTGTAACATGAGGAGCCTGGTTTTTCTCCAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VILPSCNFRHGHQKT*PPCNMRSLVFLQRL
Trigger: GAGCCTCTGGAGAAAAACCAGGCTCCTCATGTTACAAGGAGGCCATGTCTTCTGGTGCCCATGCCTGAAGTTACAGGAGGGAAGAATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS CCA 90 bp CCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCATGATATCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PWASLCLKTGCSGSG*FFGEICKLPMISGQ
Trigger: CTGCCCTGATATCATGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488449.1
CDS-3UTR CAA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTCAAAAGCAGTCATGGTaGGCAAGACAGCTTCAGACA +
Preference number: 5 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTQKQSW*ARQLQT
Trigger: TGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTG...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATTGTGTCTGTGTGACTGTCCTCGATGATTCCTaGGCAATCTTTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GVQMLHDGGAHSHCVCVTVLDDS*AIFLLS
Trigger: GCTCAAGAGAAAGATTGCCAAGGAATCATCGAGGAC...AGTCACACAGACACAATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CCATGCTCTGTTAGTGGTGTCCAGATGTTGCATGACGGGGGAGCACACTCACATGTCCTCGATGATTCCTaGGCAATCTTTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PCSVSGVQMLHDGGAHSHVLDDS*AIFLLS
Trigger: GCTCAAGAGAAAGATTGCCAAGGAATCATCGAGGAC...ATGTGAGTGTGCTCCCCCGTCATGCAACATCTGGACACCACTAACAGAGCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGGACTCTAACCTGTGCTaGGTTGACTCTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLDSNLC*VDSAGL
Trigger: GAGACCTGCAGAGTCAACCAAGCACAGGTTAGAGTC...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS CCA 90 bp ACAGCCGTGGGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCATGATATCAGG +
Preference number: 5 (lower is better)
Translates to: TAVGLSLSEDRLLRF*MVLWRNMQIAHDIR
Trigger: CCTGATATCATGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCCCACGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488449.1
CDS-3UTR CAA 90 bp CTGCCTTCTTTGTACCTGCGCCTGCTCTGTTGCTGCCAGTTGATGGTGCCTGTCGTTCTGGATGGTTCTTaGGAGAAATATGCAAATTGC +
Preference number: 5 (lower is better)
Translates to: LPSLYLRLLCCCQLMVPVVLDGS*EKYANC
Trigger: GCAATTTGCATATTTCTCCAAAGAACCATCCAGAAC...GACAGGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGCTGCCTTCTTTGTACCTGACTCGCTTCTTCATCTaGTATCCTGTCAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: ADLIGSPKSRSELPSLYLTRFFI*YPVRPA
Trigger: AGCTGGCCTGACAGGATACAAGATGAAGAAGCGAGT...CAGGTACAAAGAAGGCAGCTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTAGCTCCATCAGGTACTaGGCTTCCCAGGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PATGNSFHVKFILVPRPSSSIRY*ASQARQ
Trigger: CTGCCTGGCCTGGGAAGCCAAGTACCTGATGGAGCT...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 90 bp TCTGTTAAACAGTATTCGAATCCTGCAGGAGCTTTGTGCCAACCCTaGTGGCCACTGCCCAATATCATTCTCCCCTTTGTCCTTTACTCC +
Preference number: 5 (lower is better)
Translates to: SVKQYSNPAGALCQP*WPLPNIILPFVLYS
Trigger: GGAGTAAAGGACAAAGGGGAGAATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGATTCGAATACTGTTTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS TCA 90 bp AACGTGCAACTAGACAAGCGATGTGGCGCTGAGTCAGCGGCATCTTaGTTCAACAAACACGGCCTGGAAATAGTTCAGATTCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NVQLDKRCGAESAAS*FNKHGLEIVQIPLL
Trigger: AAGAAGAGGAATCTGAACTATTTCCAGGCCGTGTTTGTTGAATCAAGATGCCGCTGACTCAGCGCCACATCGCTTGTCTAGTTGCACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462171.1
CDS GCA 90 bp AGAAAATCCTCTGTTAAACAGTATTCGAATCCTGCAGGAGCTTTGTaGCAACCCTGCTGGCCACTGCCCAATATCATTCTCCCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: RKSSVKQYSNPAGAL*QPCWPLPNIILPFV
Trigger: GACAAAGGGGAGAATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGATTCGAATACTGTTTAACAGAGGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS-3UTR CAA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCACTCTGTTGCTGCCAGTaGATGGTGCCTGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSLCCCQ*MVPVSW
Trigger: CCAGCTGACAGGCACCATCAACTGGCAGCAACAGAG...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp GCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTTCAAGTGGTGTCCAGATGTaGCATGACGGGGGAGCACAC +
Preference number: 5 (lower is better)
Translates to: ATGNSFHVKFILVPRPSSSGVQM*HDGGAH
Trigger: GTGTGCTCCCCCGTCATGCAACATCTGGACACCACT...TGAACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CCTACATGGCTGTACAGGGCAGATCTGATTGGATCTCCTAAGAGCAGGAGTGAGGTTCTGGATGGTTCTTaGGAGAAATATGCAAATTGC +
Preference number: 5 (lower is better)
Translates to: PTWLYRADLIGSPKSRSEVLDGS*EKYANC
Trigger: GCAATTTGCATATTTCTCCAAAGAACCATCCAGAAC...CTCACTCCTGCTCTTAGGAGATCCAATCAGATCTGCCCTGTACAGCCATGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS-3UTR CAA 90 bp CCTGCTACAGGAAATTCTTTCCATGTAAAATTCATTCTTGTCCCCAGGCCTAGTGGAGAAATATGCAAATaGCCCTCTCTGAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PATGNSFHVKFILVPRPSGEICK*PSLSLS
Trigger: ACTGAGGCTCAGAGAGGGCAATTTGCATATTTCTCC...ACTAGGCCTGGGGACAAGAATGAATTTTACATGGAAAGAATTTCCTGTAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS TCA 90 bp TGCATGGATAGGCATGGAGGCTTCTACCTACTGAGTTCCAGAACCTaGATCAAGCCTCTTATATGTCTAATCTATTCCTTCAAAGGATCA +
Preference number: 5 (lower is better)
Translates to: CMDRHGGFYLLSSRT*IKPLICLIYSFKGS
Trigger: TGATCCTTTGAAGGAATAGATTAGACATATAAGAGGCTTGATTCAGGTTCTGGAACTCAGTAGGTAGAAGCCTCCATGCCTATCCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494342.1
CDS GCA 72 bp CAGCTCCCGGCCCGTGGGCAGGTGTGGCTCCCCCTCTaGAGTGGGCTCAGCTACCAGAGGCTGCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: QLPARGQVWLPL*SGLSYQRLLRQ
Trigger: CTGCCTCAGCAGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGAGCCACACCTGCCCACGGGCCGGGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS CCA 72 bp GGGAGATGCCACAGAGGGCAGCATAGGCGAAGCGGTTaGCCTCAGTCAGCTCCCGGCCCGTGGGCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: GRCHRGQHRRSG*PQSAPGPWAGV
Trigger: CACACCTGCCCACGGGCCGGGAGCTGACTGAGGCCAACCGCTTCGCCTATGCTGCCCTCTGTGGCATCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS GCA 72 bp ACAGAGGTCAGGTCCACGTTCTCCACCCTCCTGTCCTaGAGCAGCACGGGCTGTAGGCCGGCGACACGGAGC +
Preference number: 6 (lower is better)
Translates to: TEVRSTFSTLLS*SSTGCRPATRS
Trigger: GCTCCGTGTCGCCGGCCTACAGCCCGTGCTGCTGCAGGACAGGAGGGTGGAGAACGTGGACCTGACCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS CCA 72 bp AGCCCAGTGGGTTGGGGTCCATGCCATGGCTGCAGATaGGGGGCCTTTCAGGGCTGGCAGCAGCAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: SPVGWGPCHGCR*GAFQGWQQQEG
Trigger: CCCTTCCTGCTGCTGCCAGCCCTGAAAGGCCCCCCATCTGCAGCCATGGCATGGACCCCAACCCACTGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS GCA 72 bp CCAGAAGCGAGCCACCCCGTGACGGCGATGGTGATGTaGAGCTGCCTGCCCTCCGTCAGAGGCAGAAACGTG +
Preference number: 6 (lower is better)
Translates to: PEASHPVTAMVM*SCLPSVRGRNV
Trigger: CACGTTTCTGCCTCTGACGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGCTTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 72 bp CGCCCCTGCTGCCGGGAGAGCAGGATGTGGGCCAGGTaGTTGCCAACCTCTGCTGATCGATGGAGACACACC +
Preference number: 6 (lower is better)
Translates to: RPCCRESRMWAR*LPTSADRWRHT
Trigger: GGTGTGTCTCCATCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACATCCTGCTCTCCCGGCAGCAGGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS GCA 72 bp TGCAGCAGCACGGGCTGTAGGCCGGCGACACGGAGCTaGACCGAGGATGTGCGGTACACGAAACTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: CSSTGCRPATRS*TEDVRYTKLSS
Trigger: GCTGCTGAGTTTCGTGTACCGCACATCCTCGGTGCAGCTCCGTGTCGCCGGCCTACAGCCCGTGCTGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS GCA 72 bp GCGAGCCACCCCGTGACGGCGATGGTGATGTGCAGCTaGCTGCCCTCCGTCAGAGGCAGAAACGTGAACTCT +
Preference number: 6 (lower is better)
Translates to: ASHPVTAMVMCS*LPSVRGRNVNS
Trigger: AGAGTTCACGTTTCTGCCTCTGACGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS GCA 72 bp ATCCTCCCGGACACCACCTTCCGGAAAGGCTCCCAATaGTTGGCTTCTCCCTCCACAGGCGCACCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ILPDTTFRKGSQ*LASPSTGAPSR
Trigger: CCTGCTGGGTGCGCCTGTGGAGGGAGAAGCCAAGCATTGGGAGCCTTTCCGGAAGGTGGTGTCCGGGAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
ENST00000494342.1
CDS GCA 72 bp AGAGCCCCTTCTCGTCCCAGCCTGGCTTGGTGCGGATaGCCACGGCCTTCAGGATGGCATCCATCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: RAPSRPSLAWCG*PRPSGWHPSAW
Trigger: CCAAGCAGATGGATGCCATCCTGAAGGCCGTGGGCATCCGCACCAAGCCAGGCTGGGACGAGAAGGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
CDS GCA 72 bp CGGGGCACTGAAGGTGCCTGTCAGGCCAGCTCCAGCTaGACCAAACAGCGAGGTCATGATGGCTATGCCGGC +
Preference number: 6 (lower is better)
Translates to: RGTEGACQASSS*TKQRGHDGYAG
Trigger: GCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGCTGGAGCTGGCCTGACAGGCACCTTCAGTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489135.5
CDS TCA 72 bp ACCAAACAGCGAGGTCATGATGGCTATGCCGGCTGCTaGGCCCAGAGCCGCTGCCCCGGCGCTGCCAATAAT +
Preference number: 6 (lower is better)
Translates to: TKQRGHDGYAGC*AQSRCPGAANN
Trigger: ATTATTGGCAGCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS CCA 72 bp GACCCCAGAAAAGGCCGTCAGTGTCCCTGGCCACATTaGGTGCTGGGAGGGACTCCAACAGCAGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: DPRKGRQCPWPH*VLGGTPTAVEE
Trigger: CTCCTCCACTGCTGTTGGAGTCCCTCCCAGCACCCAATGTGGCCAGGGACACTGACGGCCTTTTCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494342.1
CDS CAA 90 bp TGGGCCACCATGTTGGCGAGACCACTGAGGATGGTCTCCAGGGCATaGCCGAGCTCCATCAGGTACTTGGCTTCCCAGGCCAGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: WATMLARPLRMVSRA*PSSIRYLASQARQY
Trigger: GTACTGCCTGGCCTGGGAAGCCAAGTACCTGATGGAGCTCGGCAATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACATGGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS CAA 90 bp TTGATGATCCTCCCGGACACCACCTTCCGGAAAGGCTCCCAATGCTaGGCTTCTCCCTCCACAGGCGCACCCAGCAGGATGACGTCCTCG +
Preference number: 6 (lower is better)
Translates to: LMILPDTTFRKGSQC*ASPSTGAPSRMTSS
Trigger: CGAGGACGTCATCCTGCTGGGTGCGCCTGTGGAGGGAGAAGCCAAGCATTGGGAGCCTTTCCGGAAGGTGGTGTCCGGGAGGATCATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489814.5
ENST00000494342.1
CDS TCA 72 bp CCAGGGGTTGTCGATGACATTGGCGACACTGAGGAGTaGGGCTGGCCAGGTCAGGGCAGCCACAATGCCAGA +
Preference number: 6 (lower is better)
Translates to: PGVVDDIGDTEE*GWPGQGSHNAR
Trigger: TCTGGCATTGTGGCTGCCCTGACCTGGCCAGCCTCACTCCTCAGTGTCGCCAATGTCATCGACAACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS GCA 72 bp CAGCCCCGGTTTATAATGTACAACACTGGAGGCGGCTaGGAAGGCAAAGGCGGAGGCGGCAAAACCGGCGAG +
Preference number: 6 (lower is better)
Translates to: QPRFIMYNTGGG*EGKGGGGKTGE
Trigger: CTCGCCGGTTTTGCCGCCTCCGCCTTTGCCTTCGCAGCCGCCTCCAGTGTTGTACATTATAAACCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000488449.1
CDS CCA 72 bp CCTGGGCTTGGCTGGGGTCTGTGGACATGGCCAATTTaGAGGTGTCTCCGGATATGGGACCCTGGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: PGLGWGLWTWPI*RCLRIWDPGFA
Trigger: GGCAAACCCAGGGTCCCATATCCGGAGACACCTCCAAATTGGCCATGTCCACAGACCCCAGCCAAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS CAA 72 bp ACCTGGGCTTGGCTGGGGTCTGTGGACATGGCCAATTaGGAGGTGTCTCCGGATATGGGACCCTGGGTTTGC +
Preference number: 6 (lower is better)
Translates to: TWAWLGSVDMAN*EVSPDMGPWVC
Trigger: GCAAACCCAGGGTCCCATATCCGGAGACACCTCCAAATTGGCCATGTCCACAGACCCCAGCCAAGCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000489814.5
CDS CAA 90 bp CATCTGCTCCTTCACCTCCCAGGCCGCTCGCAAAAGCAGTCATGGTaGGCAAGACAGCTTCAGACAACTCCAGCCACTGCACCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: HLLLHLPGRSQKQSW*ARQLQTTPATAPGL
Trigger: CAGGCCTGGTGCAGTGGCTGGAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS CAA 90 bp ATGCCAGACAACACTGTGTACTTTAGGGCCTCCTGGGCCACCATGTaGGCGAGACCACTGAGGATGGTCTCCAGGGCATTGCCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: MPDNTVYFRASWATM*ARPLRMVSRALPSS
Trigger: GGAGCTCGGCAATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACATGGTGGCCCAGGAGGCCCTAAAGTACACAGTGTTGTCTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS GCA 72 bp TCTTTGGAGAAATATGCAAATTGCCCTGGAGGCGGCTaGGAAGGCAAAGGCGGAGGCGGCAAAACCGGCGAG +
Preference number: 6 (lower is better)
Translates to: SLEKYANCPGGG*EGKGGGGKTGE
Trigger: CTCGCCGGTTTTGCCGCCTCCGCCTTTGCCTTCGCAGCCGCCTCCAGGGCAATTTGCATATTTCTCCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS CCA 72 bp TCCTCATCAGCAGCCCCGGTTTATAATGTACAACACTaGAGGCGGCTGCGAAGGCAAAGGCGGAGGCGGCAA +
Preference number: 6 (lower is better)
Translates to: SSSAAPVYNVQH*RRLRRQRRRRQ
Trigger: TTGCCGCCTCCGCCTTTGCCTTCGCAGCCGCCTCCAGTGTTGTACATTATAAACCGGGGCTGCTGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000488449.1
CDS TCA 72 bp GGCATGGGCACCAGAAGACATGGCCTCCTTGTAACATaGGGAGCCTGGTTTTTCTCCAGAGGCTCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: GMGTRRHGLLVT*GAWFFSRGSPS
Trigger: GCTTGGGGAGCCTCTGGAGAAAAACCAGGCTCCTCATGTTACAAGGAGGCCATGTCTTCTGGTGCCCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS CCA 72 bp CTCCTTCACCTCCCAGGCCGCTCGCAAAAGCAGTCATaGTTGGCAAGACAGCTTCAGACAACTCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: LLHLPGRSQKQS*LARQLQTTPAT
Trigger: AGTGGCTGGAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000488449.1
ENST00000489135.5
ENST00000496528.5
CDS CAA 72 bp AACACTGTGTACTTTAGGGCCTCCTGGGCCACCATGTaGGCGAGACCACTGAGGATGGTCTCCAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: NTVYFRASWATM*ARPLRMVSRAL
Trigger: CAATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACATGGTGGCCCAGGAGGCCCTAAAGTACACAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294543.11
ENST00000375127.5
ENST00000489135.5
CDS GCA 72 bp CTTCTTCATCTTGTATCCTGTCAGGCCAGCTCCAGCTaGACCAAACAGCGAGGTCATGATGGCTATGCCGGC +
Preference number: 6 (lower is better)
Translates to: LLHLVSCQASSS*TKQRGHDGYAG
Trigger: GCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGCTGGAGCTGGCCTGACAGGATACAAGATGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294543.11
ENST00000375127.5
CDS TCA 72 bp GGGTGCTGGGAGGGACTCCAACAGCAGTGGAGGAGATaGATGTCACACACATACACATGCACACACGTGAAC +
Preference number: 6 (lower is better)
Translates to: GCWEGLQQQWRR*MSHTYTCTHVN
Trigger: GTTCACGTGTGTGCATGTGTATGTGTGTGACATTCATCTCCTCCACTGCTGTTGGAGTCCCTCCCAGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494342.1
CDS GCA 72 bp GAAAGTGGATTGGATTTCACTCTCACCCCTTCTGCCTaGTGTCACACGTTCCAGAGAGCCAGTTCCCCACTC +
Preference number: 6 (lower is better)
Translates to: ESGLDFTLTPSA*CHTFQRASSPL
Trigger: GAGTGGGGAACTGGCTCTCTGGAACGTGTGACAGCAGGCAGAAGGGGTGAGAGTGAAATCCAATCCACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488449.1
CDS GCA 72 bp GGCTGCTCAGGTTCTGGATGGTTCTTTGGAGAAATATaGAAATTGCCCTGGAGGCGGCTGCGAAGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: GCSGSGWFFGEI*KLPWRRLRRQR
Trigger: CCTTTGCCTTCGCAGCCGCCTCCAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS CAA 72 bp AACCCTGCTGGCCACTGCCCAATATCATTCTCCCCTTaGTCCTTTACTCCTGAGTTTGACTGGGCACACGGC +
Preference number: 6 (lower is better)
Translates to: NPAGHCPISFSP*SFTPEFDWAHG
Trigger: GCCGTGTGCCCAGTCAAACTCAGGAGTAAAGGACAAAGGGGAGAATGATATTGGGCAGTGGCCAGCAGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS GCA 72 bp ATCCTGCAGGAGCTTTGTGCCAACCCTGCTGGCCACTaGCCAATATCATTCTCCCCTTTGTCCTTTACTCCT +
Preference number: 6 (lower is better)
Translates to: ILQELCANPAGH*PISFSPLSFTP
Trigger: AGGAGTAAAGGACAAAGGGGAGAATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS CCA 72 bp CCCTCCTGTAACTTCAGGCATGGGCACCAGAAGACATaGCCTCCTTGTAACATGAGGAGCCTGGTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: PSCNFRHGHQKT*PPCNMRSLVFL
Trigger: GAGAAAAACCAGGCTCCTCATGTTACAAGGAGGCCATGTCTTCTGGTGCCCATGCCTGAAGTTACAGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS CCA 72 bp GGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCCC +
Preference number: 6 (lower is better)
Translates to: GLSLSEDRLLRF*MVLWRNMQIAP
Trigger: GGGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS CCA 72 bp TATTCGAATCCTGCAGGAGCTTTGTGCCAACCCTGCTaGCCACTGCCCAATATCATTCTCCCCTTTGTCCTT +
Preference number: 6 (lower is better)
Translates to: YSNPAGALCQPC*PLPNIILPFVL
Trigger: AAGGACAAAGGGGAGAATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGATTCGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS CAA 72 bp CAATATCATTCTCCCCTTTGTCCTTTACTCCTGAGTTaGACTGGGCACACGGCCACCCAGCCAAAGACGAAG +
Preference number: 6 (lower is better)
Translates to: QYHSPLCPLLLS*TGHTATQPKTK
Trigger: CTTCGTCTTTGGCTGGGTGGCCGTGTGCCCAGTCAAACTCAGGAGTAAAGGACAAAGGGGAGAATGATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS CCA 72 bp GGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCTC +
Preference number: 6 (lower is better)
Translates to: GLSLSEDRLLRF*MVLWRNMQIAL
Trigger: GAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS CCA 72 bp GGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCTG +
Preference number: 6 (lower is better)
Translates to: GLSLSEDRLLRF*MVLWRNMQIAL
Trigger: CAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS TCA 72 bp CTAGACAAGCGATGTGGCGCTGAGTCAGCGGCATCTTaGTTCAACAAACACGGCCTGGAAATAGTTCAGATT +
Preference number: 6 (lower is better)
Translates to: LDKRCGAESAAS*FNKHGLEIVQI
Trigger: AATCTGAACTATTTCCAGGCCGTGTTTGTTGAATCAAGATGCCGCTGACTCAGCGCCACATCGCTTGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462171.1
CDS GCA 72 bp TCTGTTAAACAGTATTCGAATCCTGCAGGAGCTTTGTaGCAACCCTGCTGGCCACTGCCCAATATCATTCTC +
Preference number: 6 (lower is better)
Translates to: SVKQYSNPAGAL*QPCWPLPNIIL
Trigger: GAGAATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGATTCGAATACTGTTTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS CCA 72 bp GGCCTCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTaGATGGTTCTTTGGAGAAATATGCAAATTGCCCAT +
Preference number: 6 (lower is better)
Translates to: GLSLSEDRLLRF*MVLWRNMQIAH
Trigger: ATGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488449.1
CDS CCA 72 bp TCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SLCLKTGCSGSG*FFGEICKLPWR
Trigger: CCTCCAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496528.5
CDS CAA 72 bp TCCTCTGTTAAACAGTATTCGAATCCTGCAGGAGCTTaGTGCCAACCCTGCTGGCCACTGCCCAATATCATT +
Preference number: 6 (lower is better)
Translates to: SSVKQYSNPAGA*CQPCWPLPNII
Trigger: AATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGATTCGAATACTGTTTAACAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS CAA 90 bp AGTAGAAAATCCTCTGTTAAACAGTATTCGAATCCTGCAGGAGCTTaGTGCCAACCCTGCTGGCCACTGCCCAATATCATTCTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: SRKSSVKQYSNPAGA*CQPCWPLPNIILPF
Trigger: AAAGGGGAGAATGATATTGGGCAGTGGCCAGCAGGGTTGGCACAAAGCTCCTGCAGGATTCGAATACTGTTTAACAGAGGATTTTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489814.5
CDS CCA 72 bp TCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: SLCLKTGCSGSG*FFGEICKLPPS
Trigger: AGAAGGGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294543.11
CDS CCA 72 bp TCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SLCLKTGCSGSG*FFGEICKLPSL
Trigger: CAGAGAGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375127.5
CDS TCA 72 bp AAACATGCATGGATAGGCATGGAGGCTTCTACCTACTaGGTTCCAGAACCTGAATCAAGCCTCTTATATGTC +
Preference number: 6 (lower is better)
Translates to: KHAWIGMEASTY*VPEPESSLLYV
Trigger: GACATATAAGAGGCTTGATTCAGGTTCTGGAACTCAGTAGGTAGAAGCCTCCATGCCTATCCATGCATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494342.1
CDS CCA 72 bp TCTCTCTGTCTGAAGACAGGCTGCTCAGGTTCTGGATaGTTCTTTGGAGAAATATGCAAATTGCCCATGATA +
Preference number: 6 (lower is better)
Translates to: SLCLKTGCSGSG*FFGEICKLPMI
Trigger: TATCATGGGCAATTTGCATATTTCTCCAAAGAACCATCCAGAACCTGAGCAGCCTGTCTTCAGACAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488449.1
CDS TCA 72 bp AGGCATGGAGGCTTCTACCTACTGAGTTCCAGAACCTaGATCAAGCCTCTTATATGTCTAATCTATTCCTTC +
Preference number: 6 (lower is better)
Translates to: RHGGFYLLSSRT*IKPLICLIYSF
Trigger: GAAGGAATAGATTAGACATATAAGAGGCTTGATTCAGGTTCTGGAACTCAGTAGGTAGAAGCCTCCATGCCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494342.1