RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMCO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000150403

Ensembl transcript IDs: ENST00000375391.5, ENST00000434316.7, ENST00000460039.5, ENST00000462877.5, ENST00000465556.1, ENST00000473287.1, ENST00000474393.5, ENST00000491166.1, ENST00000619336.1, ENST00000620021.4, ENST00000622371.1

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAACTCAGGGACGCGGCTCCAGGCCACGGCCATGTCCTTGCGGTaGACTGCAGGGCACCAAGGGTGGGCACTGCCTAGTCCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: RNSGTRLQATAMSLR*TAGHQGWALPSPVG
Trigger: CCCCACAGGACTAGGCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCCGCGTCCCTGAGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 90 bp CCACCAGGAACTCAGGGACGCGGCTCCAGGCCACGGCCATGTCCTTaGGGTGCACTGCAGGGCACCAAGGGTGGGCACTGCCTAGTCCTG +
Preference number: 1 (lower is better)
Translates to: PPGTQGRGSRPRPCP*GALQGTKGGHCLVL
Trigger: CAGGACTAGGCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCCGCGTCCCTGAGTTCCTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp GCAGAAACGGATGTCGGTTCCCCTTCCATGTCCCATGGGAACCTCTaGCACAGCTCCCTGGCAGTGGGTCAGGGTCCTCTCCCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: AETDVGSPSMSHGNL*HSSLAVGQGPLPRP
Trigger: GGGCCTGGGGAGAGGACCCTGACCCACTGCCAGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATCCGTTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp GGCTGGAGCTCGAGACAGGAGACTGGACCACCCAGGTCAGTGCTCTaGGGACACATGGCCCAGGCACTCCCTGCTGCCAGCTGTTGTTCA +
Preference number: 1 (lower is better)
Translates to: GWSSRQETGPPRSVL*GHMAQALPAASCCS
Trigger: TGAACAACAGCTGGCAGCAGGGAGTGCCTGGGCCATGTGTCCCCAGAGCACTGACCTGGGTGGTCCAGTCTCCTGTCTCGAGCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp CAGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTaGGCACTGCCTAGTCCTGTGGGGATGAGCACGTGGTTACAGGAA +
Preference number: 1 (lower is better)
Translates to: QATAMSLRCTAGHQG*ALPSPVGMSTWLQE
Trigger: TTCCTGTAACCACGTGCTCATCCCCACAGGACTAGGCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 90 bp GCACTGGAGGAGCGCCCCGTCCCGGGCACAGGCCGTGCTGAAGAATaGGGAGCATCACAGACTCGGGGACTCAGGCATGTTTGTCTGTTC +
Preference number: 1 (lower is better)
Translates to: ALEERPVPGTGRAEE*GASQTRGLRHVCLF
Trigger: GAACAGACAAACATGCCTGAGTCCCCGAGTCTGTGATGCTCCTCATTCTTCAGCACGGCCTGTGCCCGGGACGGGGCGCTCCTCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 90 bp AGCTGGCAGCAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTaGGCTCTGCACTGGAGGAGCGCCCCGTCCCGGGCACAGGCCGTG +
Preference number: 1 (lower is better)
Translates to: SWQQQCYLKDTTVMV*ALHWRSAPSRAQAV
Trigger: CACGGCCTGTGCCCGGGACGGGGCGCTCCTCCAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTGCTGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 90 bp GATAGCATCTGTACATCTCAGGCCCTGGAGGGCTGGGCCTCACGGTaGCATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGG +
Preference number: 1 (lower is better)
Translates to: DSICTSQALEGWASR*HEHVWLQPRSPGRR
Trigger: CCTCCGTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGCCCTCCAGGGCCTGAGATGTACAGATGCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 90 bp GGGTGCTGTCCGAGTCGAGCTGGGTGTTGTTGGGTAATACAGCTCTaGATGGGCAGACGGGAGGCAGCTTTTGGGCAGCGGGGAAAGGAC +
Preference number: 1 (lower is better)
Translates to: GCCPSRAGCCWVIQL*MGRREAAFGQRGKD
Trigger: GTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCCAGCTCGACTCGGACAGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp TGTGAAGGCCGTGTAAGCTCATGGCTGGAGCTCGAGACAGGAGACTaGACCACCCAGGTCAGTGCTCTGGGGACACATGGCCCAGGCACT +
Preference number: 1 (lower is better)
Translates to: CEGRVSSWLELETGD*TTQVSALGTHGPGT
Trigger: AGTGCCTGGGCCATGTGTCCCCAGAGCACTGACCTGGGTGGTCCAGTCTCCTGTCTCGAGCTCCAGCCATGAGCTTACACGGCCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp ACACCCCAGTGCAGAAACGGATGTCGGTTCCCCTTCCATGTCCCATaGGAACCTCTGGCACAGCTCCCTGGCAGTGGGTCAGGGTCCTCT +
Preference number: 1 (lower is better)
Translates to: TPQCRNGCRFPFHVP*EPLAQLPGSGSGSS
Trigger: AGAGGACCCTGACCCACTGCCAGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATCCGTTTCTGCACTGGGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 90 bp AGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTaGTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCA +
Preference number: 1 (lower is better)
Translates to: RAVLLPRCELPRRSS*WPSKRSLPTDASLP
Trigger: TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR CCA 90 bp GGCCTTGCAGACACAGAGGCCTCGCTGGTTGAGAATGGCTGGTTTTaGGGGGAGTGTGAAGGCCGTGTAAGCTCATGGCTGGAGCTCGAG +
Preference number: 1 (lower is better)
Translates to: GLADTEASLVENGWF*GECEGRVSSWLELE
Trigger: CTCGAGCTCCAGCCATGAGCTTACACGGCCTTCACACTCCCCCCAAAACCAGCCATTCTCAACCAGCGAGGCCTCTGTGTCTGCAAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp AAACACTGGGTGCCCAGGGGGATAGCATCTGTACATCTCAGGCCCTaGAGGGCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAAC +
Preference number: 1 (lower is better)
Translates to: KHWVPRGIASVHLRP*RAGPHGDMSMCGCN
Trigger: GTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGCCCTCCAGGGCCTGAGATGTACAGATGCTATCCCCCTGGGCACCCAGTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 90 bp CCCCGGGCGAGGGAAGGCAGAGGTCACAGGACACAAACCTGTCGCTaGTCTCAGGAGAAGCATCCTCCTTCCTTCTGGAAGGGATTGGAA +
Preference number: 1 (lower is better)
Translates to: PRAREGRGHRTQTCR*SQEKHPPSFWKGLE
Trigger: TTCCAATCCCTTCCAGAAGGAAGGAGGATGCTTCTCCTGAGAGCAGCGACAGGTTTGTGTCCTGTGACCTCTGCCTTCCCTCGCCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp CTGGACGGAGGTGAAGGCACCCAGGATGAAAGGACTCAGGTGGGGTaGGCTTCGCACGGACCCCTAAACTCCAGAAGATTAGCAGGGACA +
Preference number: 1 (lower is better)
Translates to: LDGGEGTQDERTQVG*ASHGPLNSRRLAGT
Trigger: TGTCCCTGCTAATCTTCTGGAGTTTAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCATCCTGGGTGCCTTCACCTCCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 90 bp GACCTTGTGAGAACTCACTATCATGAGAACAGCCTGGGGGACATCTaGCCCCATGATCCAATCACCTCCCTCGGTCAACCCATGACGATT +
Preference number: 1 (lower is better)
Translates to: DLVRTHYHENSLGDI*PHDPITSLGQPMTI
Trigger: AATCGTCATGGGTTGACCGAGGGAGGTGATTGGATCATGGGGGCAGATGTCCCCCAGGCTGTTCTCATGATAGTGAGTTCTCACAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp TGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTaGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTGATCCGGTA +
Preference number: 1 (lower is better)
Translates to: CYRGRQHPLSLKHSG*KLTSISLVSDVDPV
Trigger: TACCGGATCAACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
3UTR TCA 90 bp ATAGGACAAGAATATTCTGTAAAAGCCGGGATAACACGACTGCACTaGCGCTCTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTC +
Preference number: 1 (lower is better)
Translates to: IGQEYSVKAGITRLH*RSARGLFCCQGASF
Trigger: GAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTATCCCGGCTTTTACAGAATATTCTTGTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR CCA 90 bp TTGTTGGGTAATACAGCTCTGCATGGGCAGACGGGAGGCAGCTTTTaGGCAGCGGGGAAAGGACACAGAAGCAGAAATATCAAAGAAGAA +
Preference number: 1 (lower is better)
Translates to: LLGNTALHGQTGGSF*AAGKGHRSRNIKEE
Trigger: TTCTTCTTTGATATTTCTGCTTCTGTGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 90 bp CTTTCCAACCGATATTTTGCTCTGTTGCTGATGCTCTTGTTACTTTaGAGTGGCTACCTAACACTCCATGGTAGTCACGCCGCAGCTGAA +
Preference number: 1 (lower is better)
Translates to: LSNRYFALLLMLLLL*SGYLTLHGSHAAAE
Trigger: TTCAGCTGCGGCGTGACTACCATGGAGTGTTAGGTAGCCACTGCAAAGTAACAAGAGCATCAGCAACAGAGCAAAATATCGGTTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR GCA 90 bp CCTGGCCAGAAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTaGTCTCAGAATCAAACCAGAACATTCTGGAGAGAACCTCCAGTC +
Preference number: 1 (lower is better)
Translates to: PGQKFNPNHFYGCLS*SQNQTRTFWREPPV
Trigger: GACTGGAGGTTCTCTCCAGAATGTTCTGGTTTGATTCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTTCTGGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 90 bp CACCGTAACCTGATGACAATTTTCAAATTTAAGATGAAGATGTCATaGTCAGGCTGGTTAGCCTCCAGCAAACATGTCCCCACAAGACTC +
Preference number: 1 (lower is better)
Translates to: HRNLMTIFKFKMKMS*SGWLASSKHVPTRL
Trigger: GAGTCTTGTGGGGACATGTTTGCTGGAGGCTAACCAGCCTGATCATGACATCTTCATCTTAAATTTGAAAATTGTCATCAGGTTACGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp GGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTaGGGGGAGTTTGATGTTACTCTCATCAAGTCGGTTTCCTTCAGT +
Preference number: 1 (lower is better)
Translates to: GTSYFILQREANFVF*GEFDVTLIKSVSFS
Trigger: ACTGAAGGAAACCGACTTGATGAGAGTAACATCAAACTCCCCCCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 90 bp TGCATGCACATGTCTAGAGCAGCACGATTTGCAGTTGCAAAAATATaGAACCAGCCCAAATGCCCATCAATAGAAAATGTGGTATTTATA +
Preference number: 1 (lower is better)
Translates to: CMHMSRAARFAVAKI*NQPKCPSIENVVFI
Trigger: TATAAATACCACATTTTCTATTGATGGGCATTTGGGCTGGTTCCATATTTTTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR TCA 90 bp ATGGCGTGGCACAATTGTTTATTCTCCTTAATTAAATTTTGGCTGTaGGTTCCCATCTACCTGGCCAGAAATTTAACCCCAATCATTTTT +
Preference number: 1 (lower is better)
Translates to: MAWHNCLFSLIKFWL*VPIYLARNLTPIIF
Trigger: AAAAATGATTGGGGTTAAATTTCTGGCCAGGTAGATGGGAACTCACAGCCAAAATTTAATTAAGGAGAATAAACAATTGTGCCACGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 90 bp CCCACCAGGAACTCAGGGACGCGGCTCCAGGCCACGGCCATGTCCTaGCGGTGCACTGCAGGGCACCAAGGGTGGGCACTGCCTAGTCCT +
Preference number: 2 (lower is better)
Translates to: PTRNSGTRLQATAMS*RCTAGHQGWALPSP
Trigger: AGGACTAGGCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCCGCGTCCCTGAGTTCCTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp GAAGGCACCCAGGATGAAAGGACTCAGGTGGGGTGGGCTTCGCACGGACCCCTACTACCAGGGGCTCGGTaGCTCGGAGACCCCCATCTG +
Preference number: 2 (lower is better)
Translates to: EGTQDERTQVGWASHGPLLPGAR*LGDPHL
Trigger: CAGATGGGGGTCTCCGAGCCACCGAGCCCCTGGTAG...TAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCATCCTGGGTGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp GCCAGGTGTCCACACCCCAGTGCAGAAACGGATGTCGGTTCCCCTTCCATGTCCAGGGTGGGGGCAATGTaGCTACCAGGGGCTCGGTGG +
Preference number: 2 (lower is better)
Translates to: ARCPHPSAETDVGSPSMSRVGAM*LPGARW
Trigger: CCACCGAGCCCCTGGTAGCCACATTGCCCCCACCCT...GGACATGGAAGGGGAACCGACATCCGTTTCTGCACTGGGGTGTGGACACCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 90 bp GGGACACATGGCCCAGGCACTCCCTGCTGCCAGCTGTTGTTCAGGTaGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGG +
Preference number: 2 (lower is better)
Translates to: GTHGPGTPCCQLLFR*LSRPPTPPQPQAFR
Trigger: CCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTGCCTGGGCCATGTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
3UTR-3UTR CCA 90 bp GCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACATCATGAGAACAGCCTaGGGGACATCTGCCCCCATG +
Preference number: 2 (lower is better)
Translates to: AGPHGDMSMCGCNPGVLDIMRTA*GTSAPM
Trigger: CATGGGGGCAGATGTCCCCCAGGCTGTTCTCATGAT...GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 90 bp GGCCTGTCCGAGTTGAGCTGGGTGCTGTCCGAGTCGAGCTGGGTGTaGTTGGGTAATACAGCTCTGCATGGGCAGACGGGAGGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: GLSELSWVLSESSWV*LGNTALHGQTGGSF
Trigger: AAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCCAGCTCGACTCGGACAGCACCCAGCTCAACTCGGACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp CATGGGCAGACGGGAGGCAGCTTTTGGGCAGCGGGGAAAGGACACAGAAGCAGAAGAGGCCTCGCTGGTTaGGAATGGCTGGTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: HGQTGGSFWAAGKGHRSRRGLAG*EWLVLG
Trigger: CCCCAAAACCAGCCATTCTCAACCAGCGAGGCCTCT...TCTGCTTCTGTGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTCTGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAAATGCTGAGAGCAGGGTaGGGGCAATGTGGCTACCAG +
Preference number: 2 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEMLRAG*GQCGYQ
Trigger: CTGGTAGCCACATTGCCCCCACCCTGCTCTCAGCAT...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 90 bp CTGTCCGAGTTGAGCTGGGTGCTGTCCGAGTCGAGCTGGGTGTTGTaGGGTAATACAGCTCTGCATGGGCAGACGGGAGGCAGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: LSELSWVLSESSWVL*GNTALHGQTGGSFW
Trigger: CCAAAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCCAGCTCGACTCGGACAGCACCCAGCTCAACTCGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp AGGGGAAGCAGACACATCCTTATTCACAAGGCAGCAGGATGGAGAAGCGAGAGCGTCCTTGCGGTGCACTaGAGGGCACCAAGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: RGSRHILIHKAAGWRSESVLAVH*RAPRVG
Trigger: GCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGAC...GCTCTCGCTTCTCCATCCTGCTGCCTTGTGAATAAGGATGTGTCTGCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAACCTGGTCTCAGATGTTaGTCCGGTAGGATTTCACCG +
Preference number: 2 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEPGLRC*SGRISP
Trigger: CGGTGAAATCCTACCGGATCAACATCTGAGACCAGG...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp GCAGCAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTGAGCTCTGCACTGCTAGCCTCGCAGTGCTaGCGTGTGGGCCTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: AAAVLFEGHHSHGVSSALLASQC*RVGLWV
Trigger: GACCCACAGGCCCACACGGCAGCACTGCGAGGCTAG...CAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTACAGCTCCCTGGCAGTaGGTCAGGGTCCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSTAPWQ*VRVLSP
Trigger: TGGGGAGAGGACCCTGACCCACTGCCAGGGAGCTGT...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTTCTGGCACAGCTCCCTaGCAGTGGGTCAGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSSGTAP*QWVRVL
Trigger: GAGGACCCTGACCCACTGCCAGGGAGCTGTGCCAGA...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCACTTCTGAGCTCAAGTaGTTCTCCTGCCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: SSQLSLSSSWSIHERDHATSELK*FSCLSF
Trigger: GAAGCTGAGGCAGGAGAATCACTTGAGCTCAGAAGT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
3UTR-3UTR TCA 90 bp CTGGCCAGAAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTGCTCTCAGACTCCCCAGGCCCTCATaGCGCCCAGAGGACCCGCCC +
Preference number: 2 (lower is better)
Translates to: LARNLTPIIFMGVSPALRLPRPS*RPEDPP
Trigger: GGGCGGGTCCTCTGGGCGTCATGAGGGCCTGGGGAG...TCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTTCTGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACCCAGAAGGAGCAGCTaGTGGCCATCTAAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAPRRSS*WPSKRS
Trigger: TGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCTGGG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR-3UTR GCA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAAGTCAAGAAAGGGTTCTaGTGGGTCAGCATGGGACAA +
Preference number: 2 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEVKKGF*WVSMGQ
Trigger: TTGTCCCATGCTGACCCAGCAGAACCCTTTCTTGAC...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp GCAGCAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTGAGCTCTGCACTGGCCATGTCCTTGCGGTaGACTGCAGGGCACCAAGGG +
Preference number: 2 (lower is better)
Translates to: AAAVLFEGHHSHGVSSALAMSLR*TAGHQG
Trigger: CCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGC...CAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTTCTGCTGGGTCAGCATaGGACAAACGGGCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSSAGSA*DKRAGH
Trigger: GTGACCTGCCCGTTTGTCCCATGCTGACCCAGCAGA...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp TTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCCTGGTCTCAGATGTTaGTCCGGTAGGATTTCACCG +
Preference number: 2 (lower is better)
Translates to: LLSRPPTPPQPQAFRLEAPGLRC*SGRISP
Trigger: CGGTGAAATCCTACCGGATCAACATCTGAGACCAGG...AGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
3UTR-3UTR TCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTCCACAAGACTCACCATaGGTCCGTCCTCCCACTTCT +
Preference number: 2 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSPQDSP*VRPPTS
Trigger: AGAAGTGGGAGGACGGACTCATGGTGAGTCTTGTGG...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp CATGGGCAGACGGGAGGCAGCTTTTGGGCAGCGGGGAAAGGACACAGAAGCAGAAAAAAGTCACCCTGTTaGAGAGACTCCACTGTATCC +
Preference number: 2 (lower is better)
Translates to: HGQTGGSFWAAGKGHRSRKKSPC*RDSTVS
Trigger: GGATACAGTGGAGTCTCTGCAACAGGGTGACTTTTT...TCTGCTTCTGTGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTCTGCCCATG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp GAAGGCACCCAGGATGAAAGGACTCAGGTGGGGTGGGCTTCGCACGGACCCCTATTCTTTCTAGTGACATaGTACACACTGGGGAAATGC +
Preference number: 2 (lower is better)
Translates to: EGTQDERTQVGWASHGPLFFLVT*YTLGKC
Trigger: GCATTTCCCCAGTGTGTAGCATGTCACTAGAAAGAA...TAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCATCCTGGGTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CCA 90 bp AGGGGAAGCAGACACATCCTTATTCACAAGGCAGCAGGATGGAGAAGCGAGAGCGAGAATGGCTGGTTTTaGGGGGAGTGTGAAGGCCGT +
Preference number: 2 (lower is better)
Translates to: RGSRHILIHKAAGWRSESENGWF*GECEGR
Trigger: ACGGCCTTCACACTCCCCCCAAAACCAGCCATTCTC...GCTCTCGCTTCTCCATCCTGCTGCCTTGTGAATAAGGATGTGTCTGCTTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTACACAAACCTGTCGCTaGTCTCAGGAGAAGCATCCT +
Preference number: 2 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSTQTCR*SQEKHP
Trigger: AGGATGCTTCTCCTGAGAGCAGCGACAGGTTTGTGT...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp ATGTTGGCAGGGATGTGGGGAACAGGGAACACTTCTGCACTGCTGGTGGGAGCGCTGAAGTTAGCCATGTaGAGGCAAATTCCAATTCTT +
Preference number: 2 (lower is better)
Translates to: MLAGMWGTGNTSALLVGALKLAM*RQIPIL
Trigger: AAGAATTGGAATTTGCCTTCACATGGCTAACTTCAG...CGCTCCCACCAGCAGTGCAGAAGTGTTCCCTGTTCCCCACATCCCTGCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGAGAAGGAGCAGCTGCTaGCCATCTAAGCGCTCACTC +
Preference number: 2 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQRRSSC*PSKRSL
Trigger: GAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCT...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR-3UTR CCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGTGGACTCTGCGGACTTaGGGCAAAGGGTGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMWTLRT*GKGWWV
Trigger: CACCCACCACCCTTTGCCCCAAGTCCGCAGAGTCCA...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp CCTAAACTCCAGAAGATTAGCAGGGACATAGGCAAGGCACTGGAATCACACAGGGAGGGTGAAGCTTTCTaGAAGGTCTGGATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: PKLQKISRDIGKALESHREGEAF*KVWMKE
Trigger: CTCTTTCATCCAGACCTTCCAGAAAGCTTCACCCTC...CCTGTGTGATTCCAGTGCCTTGCCTATGTCCCTGCTAATCTTCTGGAGTTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp CTGGCCAGAAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTGCTCTCAGACTAGTCCTGTGGGGATaGGCACGTGGTTACAGGAAT +
Preference number: 2 (lower is better)
Translates to: LARNLTPIIFMGVSPALRLVLWG*ARGYRN
Trigger: ATTCCTGTAACCACGTGCTCATCCCCACAGGACTAG...TCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTTCTGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR GCA 90 bp TGTACAAATCCAAAGAGCTGGAGAAAATCTCCACAATCTATACATCCGACAAAGGGGAGCAGTGTACACTaGTCTGGTGACAGGTGCACC +
Preference number: 2 (lower is better)
Translates to: CTNPKSWRKSPQSIHPTKGSSVH*SGDRCT
Trigger: GGTGCACCTGTCACCAGAGCAGTGTACACTGCTCCC...CTTTGTCGGATGTATAGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp CAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACCAAATGGGGCAAAGGGTGGTaGGTGGCGAGGGATAAAAGA +
Preference number: 2 (lower is better)
Translates to: QIKTTMQYLTPPRMAVTKWGKGW*VARDKR
Trigger: TCTTTTATCCCTCGCCACCCACCACCCTTTGCCCCA...TTTGGTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGACTTGGGGCAAAGGGTaGTGGGTGGCGAGGGATAAA +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMTWGKG*WVARDK
Trigger: TTTATCCCTCGCCACCCACCACCCTTTGCCCCAAGT...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR TCA 90 bp ACGAAAAAGAGACTTGCATGCACATGTCTAGAGCAGCACGATTTGCAGTTGCAAAAGCTCTATGACATCTaGCCCTCTAACAGTTTCGCA +
Preference number: 2 (lower is better)
Translates to: TKKRLACTCLEQHDLQLQKLYDI*PSNSFA
Trigger: TGCGAAACTGTTAGAGGGTCAGATGTCATAGAGCTT...TTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCAAGTCTCTTTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp ACTTTTGCTAAGTCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTGGTATTACCTCTCCCCACCCTaGCTTTTAATCAGCTACTTT +
Preference number: 2 (lower is better)
Translates to: TFAKSMLVFQLALQAKWYYLSPP*LLISYF
Trigger: AAAGTAGCTGATTAAAAGCCAGGGTGGGGAGAGGTA...ATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGACTTAGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CAA 90 bp TCAATATCCCAAGAACCTTTAAGTATCCTGTTTATAAATATTCAATaGACCCATGTTTACGGTCTAGCCTCGCAGTGCTGCCGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: SISQEPLSILFINIQ*THVYGLASQCCRVG
Trigger: GCCCACACGGCAGCACTGCGAGGCTAGACCGTAAACATGGGTCAATTGAATATTTATAAACAGGATACTTAAAGGTTCTTGGGATATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR TCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCACCACATTCAAGGTaGTCGGTAAAACGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITAPHSR*SVKRSV
Trigger: GACACTGCGTTTTACCGATCACCTTGAATGTGGTGC...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
3UTR-3UTR GCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAAAATCTGGTTCAAGAATaGCTGTTACATCTGACAGTC +
Preference number: 2 (lower is better)
Translates to: VHCSGDRCTKISQITTKENLVQE*LLHLTV
Trigger: GACTGTCAGATGTAACAGGCATTCTTGAACCAGATT...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR TCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGAAGGGTGTACAGTTGTaGTTCTCACGAATCTGGTTC +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMKGVQL*FSRIWF
Trigger: GAACCAGATTCGTGAGAATCACAACTGTACACCCTT...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR TCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGCATGAGAGAGCTGAATaGTTAGGCAAACCAGACACT +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMHERAE*LGKPDT
Trigger: AGTGTCTGGTTTGCCTAATCATTCAGCTCTCTCATG...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR GCA 90 bp ATCATGGCTACCCGGAACGCTTCTTTCCCATTTTTCCCCCATGTATTGGTGCTTAAATCAAAACCACAATaGAATACCTTACTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: IMATRNASFPFFPHVLVLKSKPQ*NTLLLQ
Trigger: TTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTT...AAGCACCAATACATGGGGGAAAAATGGGAAAGAAGCGTTCCGGGTAGCCATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACTTTTGTGCGGTGTCTaGAAAAACAAAGTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: VHCSGDRCTKISQITTKELLCGV*KNKVSF
Trigger: AAAAGACACTTTGTTTTTCCAGACACCGCACAAAAG...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGGCAGTTGCAAAAATATaGAACCAGCCCAAATGCCCA +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMAVAKI*NQPKCP
Trigger: TGGGCATTTGGGCTGGTTCCATATTTTTGCAACTGC...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGCTTGTTACTTTGCAGTaGCTACCTAACACTCCATGG +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMLVTLQ*LPNTPW
Trigger: CCATGGAGTGTTAGGTAGCCACTGCAAAGTAACAAG...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR TCA 90 bp CAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACCAAATCTAGGGTAACACACTaGATATGCAAGCTCTATGAC +
Preference number: 2 (lower is better)
Translates to: QIKTTMQYLTPPRMAVTKSRVTH*ICKLYD
Trigger: GTCATAGAGCTTGCATATTCAGTGTGTTACCCTAGA...TTTGGTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR GCA 90 bp AATGCAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACTGGAACCAGCCCAAATaGCCATCAATAGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: NANQNHNAIPYSSKNGRNWNQPK*PSIENV
Trigger: CACATTTTCTATTGATGGGCATTTGGGCTGGTTCCA...GTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp AATGCAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACGTATTTGTAGCAACCTaGATGGAACTGGAGACCATT +
Preference number: 2 (lower is better)
Translates to: NANQNHNAIPYSSKNGRNVFVAT*MELETI
Trigger: AATGGTCTCCAGTTCCATCCAGGTTGCTACAAATAC...GTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR GCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGTACGAAAAAGAGACTTaGATGCACATGTCTAGAGCA +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMYEKET*MHMSRA
Trigger: TGCTCTAGACATGTGCATGCAAGTCTCTTTTTCGTA...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp TGTACAAATCCAAAGAGCTGGAGAAAATCTCCACAATCTATACATCCGACAAAGGCACTGCAGGCAAAGTaGTATCTGATCTTAATTCAC +
Preference number: 2 (lower is better)
Translates to: CTNPKSWRKSPQSIHPTKALQAK*YLILIH
Trigger: GTGAATTAAGATCAGATACCACTTTGCCTGCAGTGC...CTTTGTCGGATGTATAGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR GCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGGACCATTATTCTAAGTaGAGTAACTCAGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMDHYSK*SNSGME
Trigger: TTCCATTCCTGAGTTACTGCACTTAGAATAATGGTC...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CCA 90 bp GAGAGTATAAAGAAAAACATGCCAGTGAGATCAGAGTTGACTTCTGAAAGTAAACTAAGGAAAACAGTGTaGAGGTTGCTCAGAGAACTA +
Preference number: 2 (lower is better)
Translates to: ESIKKNMPVRSELTSESKLRKTV*RLLREL
Trigger: TAGTTCTCTGAGCAACCTCCACACTGTTTTCCTTAG...TTTACTTTCAGAAGTCAACTCTGATCTCACTGGCATGTTTTTCTTTATACTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR TCA 90 bp GAGAGTATAAAGAAAAACATGCCAGTGAGATCAGAGTTGACTTCTGAAAGTAAATTTACAATGAGGAGGTaGAACCTTTTGTGGGTAAAT +
Preference number: 2 (lower is better)
Translates to: ESIKKNMPVRSELTSESKFTMRR*NLLWVN
Trigger: ATTTACCCACAAAAGGTTTCACCTCCTCATTGTAAA...TTTACTTTCAGAAGTCAACTCTGATCTCACTGGCATGTTTTTCTTTATACTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR GCA 90 bp GAGAGTATAAAGAAAAACATGCCAGTGAGATCAGAGTTGACTTCTGAAAGTAAATACTTTCCTCTTTTGTaGGGTGTCTGGAAAAACAAA +
Preference number: 2 (lower is better)
Translates to: ESIKKNMPVRSELTSESKYFPLL*GVWKNK
Trigger: TTTGTTTTTCCAGACACCGCACAAAAGAGGAAAGTA...TTTACTTTCAGAAGTCAACTCTGATCTCACTGGCATGTTTTTCTTTATACTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CAA 90 bp GGCTCCAGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTGGGGGCCCAGCTGGGGCTTaGAGGACACCGTTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: GSRPRPCPCGALQGTKGGGPAGA*RTPFLG
Trigger: GCCCAGGAACGGTGTCCTCAAAGCCCCAGCTGGGCC...CCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp CATGACGCCCAGAGGACCCGCCCCTCACTGAGAAGCCCCACCCTCGGCCGACCCGACGGGAGGCAGCTTTaGGGCAGCGGGGAAAGGACA +
Preference number: 3 (lower is better)
Translates to: HDAQRTRPSLRSPTLGRPDGRQL*GSGERT
Trigger: TGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTC...GGGTCGGCCGAGGGTGGGGCTTCTCAGTGAGGGGCGGGTCCTCTGGGCGTCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp GGGACGCGGCTCCAGGCCACGGCCATGTCCTTGCGGTaGACTGCAGGGCACCAAGGGTGGGCACTGCCTAGT +
Preference number: 3 (lower is better)
Translates to: GTRLQATAMSLR*TAGHQGWALPS
Trigger: ACTAGGCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCCGCGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp ACTCAGGGACGCGGCTCCAGGCCACGGCCATGTCCTTaGGGTGCACTGCAGGGCACCAAGGGTGGGCACTGC +
Preference number: 3 (lower is better)
Translates to: TQGRGSRPRPCP*GALQGTKGGHC
Trigger: GCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCCGCGTCCCTGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp CATGACGCCCAGAGGACCCGCCCCTCACTGAGAAGCCCCACCCTCGGCCGACCCCCCTGCTGCCAGCTGTaGTTCAGGTTGTTATCGAGG +
Preference number: 3 (lower is better)
Translates to: HDAQRTRPSLRSPTLGRPPCCQL*FRLLSR
Trigger: CCTCGATAACAACCTGAACAACAGCTGGCAGCAGGG...GGGTCGGCCGAGGGTGGGGCTTCTCAGTGAGGGGCGGGTCCTCTGGGCGTCATG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp AGGGCTGGGCCTCACGGTGACATGAGCATGTGTGGCTaGAACCCCGGAGTCCTGGACGGAGGTGAAGGCACC +
Preference number: 3 (lower is better)
Translates to: RAGPHGDMSMCG*NPGVLDGGEGT
Trigger: GGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp GCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTaGGCACTGCCTAGTCCTGTGGGGATGAGCACGTGG +
Preference number: 3 (lower is better)
Translates to: AMSLRCTAGHQG*ALPSPVGMSTW
Trigger: CCACGTGCTCATCCCCACAGGACTAGGCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 72 bp GAGCGCCCCGTCCCGGGCACAGGCCGTGCTGAAGAATaGGGAGCATCACAGACTCGGGGACTCAGGCATGTT +
Preference number: 3 (lower is better)
Translates to: ERPVPGTGRAEE*GASQTRGLRHV
Trigger: AACATGCCTGAGTCCCCGAGTCTGTGATGCTCCTCATTCTTCAGCACGGCCTGTGCCCGGGACGGGGCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp AACGGATGTCGGTTCCCCTTCCATGTCCCATGGGAACCTCTGGCACAGCTCCCTCGGGGCCTGTCCGAGTaGAGCTGGGTGCTGTCCGAG +
Preference number: 3 (lower is better)
Translates to: NGCRFPFHVPWEPLAQLPRGLSE*SWVLSE
Trigger: CTCGGACAGCACCCAGCTCAACTCGGACAGGCCCCG...AGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATCCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 72 bp CCCCCAAGCTCTTACTTTCCCGGGGCCTGTCCGAGTTaGGCTGGGTGCTGTCCGAGTCGAGCTGGGTGTTGT +
Preference number: 3 (lower is better)
Translates to: PPSSYFPGACPS*AGCCPSRAGCC
Trigger: ACAACACCCAGCTCGACTCGGACAGCACCCAGCTCAACTCGGACAGGCCCCGGGAAAGTAAGAGCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp GATGTCGGTTCCCCTTCCATGTCCCATGGGAACCTCTaGCACAGCTCCCTGGCAGTGGGTCAGGGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: DVGSPSMSHGNL*HSSLAVGQGPL
Trigger: GAGAGGACCCTGACCCACTGCCAGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp CTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTaGTGGCCATCTAAGCGCTCACTCCCCACAGACGCT +
Preference number: 3 (lower is better)
Translates to: LLPRCELPRRSS*WPSKRSLPTDA
Trigger: AGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR CCA 72 bp TTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTaGCCATCTAAGCGCTCACTCCCCACAGACGCTTCC +
Preference number: 3 (lower is better)
Translates to: LPRCELPRRSSC*PSKRSLPTDAS
Trigger: GGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR TCA 72 bp CAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTaGGCTCTGCACTGGAGGAGCGCCCCGTCCCGGGCA +
Preference number: 3 (lower is better)
Translates to: QQCYLKDTTVMV*ALHWRSAPSRA
Trigger: TGCCCGGGACGGGGCGCTCCTCCAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp TGCAGAAACGGATGTCGGTTCCCCTTCCATGTCCCATaGGAACCTCTGGCACAGCTCCCTGGCAGTGGGTCA +
Preference number: 3 (lower is better)
Translates to: CRNGCRFPFHVP*EPLAQLPGSGS
Trigger: TGACCCACTGCCAGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATCCGTTTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAAGGGACTCAGGCATGTTaGTCTGTTCTCACGCCTTCC +
Preference number: 3 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEGTQAC*SVLTPS
Trigger: GGAAGGCGTGAGAACAGACAAACATGCCTGAGTCCC...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp GACACAGAGGCCTCGCTGGTTGAGAATGGCTGGTTTTaGGGGGAGTGTGAAGGCCGTGTAAGCTCATGGCTG +
Preference number: 3 (lower is better)
Translates to: DTEASLVENGWF*GECEGRVSSWL
Trigger: CAGCCATGAGCTTACACGGCCTTCACACTCCCCCCAAAACCAGCCATTCTCAACCAGCGAGGCCTCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp GGTGAAGGCACCCAGGATGAAAGGACTCAGGTGGGGTaGGCTTCGCACGGACCCCTAAACTCCAGAAGATTA +
Preference number: 3 (lower is better)
Translates to: GEGTQDERTQVG*ASHGPLNSRRL
Trigger: TAATCTTCTGGAGTTTAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCATCCTGGGTGCCTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp TGGCAGGGATGTGGGGAACAGGGAACACTTCTGCACTaGTGGTGGGAGCGTAAACTAGCACAACCACTAAGG +
Preference number: 3 (lower is better)
Translates to: WQGCGEQGTLLH*WWERKLAQPLR
Trigger: CCTTAGTGGTTGTGCTAGTTTACGCTCCCACCAGCAGTGCAGAAGTGTTCCCTGTTCCCCACATCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR GCA 72 bp AGAACTCACTATCATGAGAACAGCCTGGGGGACATCTaGCCCCATGATCCAATCACCTCCCTCGGTCAACCC +
Preference number: 3 (lower is better)
Translates to: RTHYHENSLGDI*PHDPITSLGQP
Trigger: GGGTTGACCGAGGGAGGTGATTGGATCATGGGGGCAGATGTCCCCCAGGCTGTTCTCATGATAGTGAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp GCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACGCTTGGCTTTCAAATTaGTTCACGATGCTTTCTGAT +
Preference number: 3 (lower is better)
Translates to: AGPHGDMSMCGCNPGVLDAWLSN*FTMLSD
Trigger: ATCAGAAAGCATCGTGAACAAATTTGAAAGCCAAGC...GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 72 bp CTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATaGGCGCGACCACGCCCCAGCTGGTTTTTCTATTTT +
Preference number: 3 (lower is better)
Translates to: LPAQSLQQLVYT*ARPRPSWFFYF
Trigger: AAAATAGAAAAACCAGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474393.5
3UTR CCA 72 bp AATACAGCTCTGCATGGGCAGACGGGAGGCAGCTTTTaGGCAGCGGGGAAAGGACACAGAAGCAGAAATATC +
Preference number: 3 (lower is better)
Translates to: NTALHGQTGGSF*AAGKGHRSRNI
Trigger: GATATTTCTGCTTCTGTGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCACCCGGCCCACGGATTaGTTTTTAATGAAATACTCA +
Preference number: 3 (lower is better)
Translates to: SSQLSLSSSWSIHERDHATRPTD*FLMKYS
Trigger: TGAGTATTTCATTAAAAACAAATCCGTGGGCCGGGT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474393.5
3UTR TCA 72 bp GGGATGGGGAGGGTGAAGCTTTCTGGAAGGTCTGGATaGAAGAGGAGTCATGAGGTCAAGAAAGGGTTCTGC +
Preference number: 3 (lower is better)
Translates to: GMGRVKLSGRSG*KRSHEVKKGFC
Trigger: GCAGAACCCTTTCTTGACCTCATGACTCCTCTTTCATCCAGACCTTCCAGAAAGCTTCACCCTCCCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp CAGGGATGTGGGGAACAGGGAACACTTCTGCACTGCTaGTGGGAGCGTAAACTAGCACAACCACTAAGGAAA +
Preference number: 3 (lower is better)
Translates to: QGCGEQGTLLHC*WERKLAQPLRK
Trigger: TTTCCTTAGTGGTTGTGCTAGTTTACGCTCCCACCAGCAGTGCAGAAGTGTTCCCTGTTCCCCACATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CAA 90 bp GCAGCAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTGAGCTCTGCACTGGAGTCGAGCTGGGTGTaGTTGGGTAATACAGCTCTG +
Preference number: 3 (lower is better)
Translates to: AAAVLFEGHHSHGVSSALESSWV*LGNTAL
Trigger: CAGAGCTGTATTACCCAACAACACCCAGCTCGACTC...CAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CCA 72 bp AAATGTGTAAGAATGACACACTGGACTCTGCGGACTTaGGGCAAAGGGTGGTGGGTGGCGAGGGATAAAAGA +
Preference number: 3 (lower is better)
Translates to: KCVRMTHWTLRT*GKGWWVARDKR
Trigger: TCTTTTATCCCTCGCCACCCACCACCCTTTGCCCCAAGTCCGCAGAGTCCAGTGTGTCATTCTTACACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR TCA 72 bp GAATATTCTGTAAAAGCCGGGATAACACGACTGCACTaGCGCTCTGCTAGAGGGCTGTTCTGTTGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: EYSVKAGITRLH*RSARGLFCCQG
Trigger: ACCTTGGCAACAGAACAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTATCCCGGCTTTTACAGAATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
3UTR GCA 72 bp CGATATTTTGCTCTGTTGCTGATGCTCTTGTTACTTTaGAGTGGCTACCTAACACTCCATGGTAGTCACGCC +
Preference number: 3 (lower is better)
Translates to: RYFALLLMLLLL*SGYLTLHGSHA
Trigger: GGCGTGACTACCATGGAGTGTTAGGTAGCCACTGCAAAGTAACAAGAGCATCAGCAACAGAGCAAAATATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CAA 90 bp CTGGCCAGAAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTGCTCTCAGACCTCAAGCATTCAGGTaGGAAGCTCACTTCCATAAG +
Preference number: 3 (lower is better)
Translates to: LARNLTPIIFMGVSPALRPQAFR*EAHFHK
Trigger: CTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGG...TCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTTCTGGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp CATGGTAGTCACGCCGCAGCTGAACTGACCGTTAGATaGTCAGGACTGGTTCCACTGTTTCTTAAAAATTTA +
Preference number: 3 (lower is better)
Translates to: HGSHAAAELTVR*SGLVPLFLKNL
Trigger: TAAATTTTTAAGAAACAGTGGAACCAGTCCTGAGCATCTAACGGTCAGTTCAGCTGCGGCGTGACTACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR-3UTR CAA 90 bp GTCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTGGTATCTGATCTTAATAGCTACTTTCCTCTTTaGTGCGGTGTCTGGAAAAAC +
Preference number: 3 (lower is better)
Translates to: VDASFPASTAGKVVSDLNSYFPL*CGVWKN
Trigger: GTTTTTCCAGACACCGCACAAAAGAGGAAAGTAGCT...ATTAAGATCAGATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CCA 72 bp GAGCGTAAACTAGCACAACCACTAAGGAAAACAGTGTaGAGGTTGCTCAGAGAACTAAAAGTAGCTCTACCA +
Preference number: 3 (lower is better)
Translates to: ERKLAQPLRKTV*RLLRELKVALP
Trigger: TGGTAGAGCTACTTTTAGTTCTCTGAGCAACCTCCACACTGTTTTCCTTAGTGGTTGTGCTAGTTTACGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CCA 72 bp GTGTGGATTTGCCCTGCCGGACTTGGATGCATGGCGTaGCACAATTGTTTATTCTCCTTAATTAAATTTTGG +
Preference number: 3 (lower is better)
Translates to: VWICPAGLGCMA*HNCLFSLIKFW
Trigger: CCAAAATTTAATTAAGGAGAATAAACAATTGTGCCACGCCATGCATCCAAGTCCGGCAGGGCAAATCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 72 bp CTGATGACAATTTTCAAATTTAAGATGAAGATGTCATaGTCAGGCTGGTTAGCCTCCAGCAAACATGTCCCC +
Preference number: 3 (lower is better)
Translates to: LMTIFKFKMKMS*SGWLASSKHVP
Trigger: GGGGACATGTTTGCTGGAGGCTAACCAGCCTGATCATGACATCTTCATCTTAAATTTGAAAATTGTCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR GCA 72 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTaGAGTAACTCAGGAATGGAAAATCAAACGTCGTAT +
Preference number: 3 (lower is better)
Translates to: SNLDGTGDHYSK*SNSGMENQTSY
Trigger: ATACGACGTTTGATTTTCCATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CCA 72 bp TCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTaGTATCTGATCTTAATTCACAGGGTGTTTTTGTTA +
Preference number: 3 (lower is better)
Translates to: SMLVFQLALQAK*YLILIHRVFLL
Trigger: TAACAAAAACACCCTGTGAATTAAGATCAGATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CCA 72 bp TATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTaGGGGGAGTTTGATGTTACTCTCATCAAGTCGGTT +
Preference number: 3 (lower is better)
Translates to: YFILQREANFVF*GEFDVTLIKSV
Trigger: AACCGACTTGATGAGAGTAACATCAAACTCCCCCCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
3UTR GCA 72 bp GGGAAAATAAGTCATTATACGAAAAAGAGACTTGCATaGACATGTCTAGAGCAGCACGATTTGCAGTTGCAA +
Preference number: 3 (lower is better)
Translates to: GKISHYTKKRLA*TCLEQHDLQLQ
Trigger: TTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCAAGTCTCTTTTTCGTATAATGACTTATTTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CCA 72 bp ACAGCTCTCCAAAAAGAGTGTACAAATCCAAAGAGCTaGAGAAAATCTCCACAATCTATACATCCGACAAAG +
Preference number: 3 (lower is better)
Translates to: TALQKECTNPKS*RKSPQSIHPTK
Trigger: CTTTGTCGGATGTATAGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGTACACTCTTTTTGGAGAGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR GCA 72 bp AAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTaGTCTCAGAATCAAACCAGAACATTCTGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: KFNPNHFYGCLS*SQNQTRTFWRE
Trigger: TTCTCTCCAGAATGTTCTGGTTTGATTCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR TCA 72 bp CACAATTGTTTATTCTCCTTAATTAAATTTTGGCTGTaGGTTCCCATCTACCTGGCCAGAAATTTAACCCCA +
Preference number: 3 (lower is better)
Translates to: HNCLFSLIKFWL*VPIYLARNLTP
Trigger: TGGGGTTAAATTTCTGGCCAGGTAGATGGGAACTCACAGCCAAAATTTAATTAAGGAGAATAAACAATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR-3UTR CAA 90 bp GAGAGTATAAAGAAAAACATGCCAGTGAGATCAGAGTTGACTTCTGAAAGTAAAAAAACAGTGTGGAGGTaGCTCAGAGAACTAAAAGTA +
Preference number: 3 (lower is better)
Translates to: ESIKKNMPVRSELTSESKKTVWR*LRELKV
Trigger: TACTTTTAGTTCTCTGAGCAACCTCCACACTGTTTT...TTTACTTTCAGAAGTCAACTCTGATCTCACTGGCATGTTTTTCTTTATACTCTC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp CATGACGCCCAGAGGACCCGCCCCTCACTGAGAAGCCCCACCCTCGGCCGACCCACACCTCCCGAGAGATaGCGCCCGCTCTTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: HDAQRTRPSLRSPTLGRPTPPER*RPLFAP
Trigger: GGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGT...GGGTCGGCCGAGGGTGGGGCTTCTCAGTGAGGGGCGGGTCCTCTGGGCGTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 72 bp AACTCAGGGACGCGGCTCCAGGCCACGGCCATGTCCTaGCGGTGCACTGCAGGGCACCAAGGGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: NSGTRLQATAMS*RCTAGHQGWAL
Trigger: CAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCCGCGTCCCTGAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CATGACGCCCAGAGGACCCGCCCCTCACTGAGAAGCCCCACCCTCGGCCGACCCCCAGGGGAAGCTCAGTaGGTAGCGGGTGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: HDAQRTRPSLRSPTLGRPPGEAQ*VAGVDL
Trigger: CAAATCCACACCCGCTACTCACTGAGCTTCCCCTGG...GGGTCGGCCGAGGGTGGGGCTTCTCAGTGAGGGGCGGGTCCTCTGGGCGTCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp ACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCTCCCCAGGCCCTCATaGCGCCCAGAGGACCCGCCC +
Preference number: 4 (lower is better)
Translates to: TPCCQLLFRLLSRPPTPPLPRPS*RPEDPP
Trigger: GGGCGGGTCCTCTGGGCGTCATGAGGGCCTGGGGAG...AGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCAACTGCCGGCTCTGCATaGCAGCCACCCCTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPTAGSA*QPPLAR
Trigger: GCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGT...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTACTGCCGGCTCTGCATaGCAGCCACCCCTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPATAGSA*QPPLAR
Trigger: GCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp CCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCGCCAGGTCCTGTGGCTaGAGTGGGGCAGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PAASCCSGCYRGRQHPLSARSCG*SGAGGP
Trigger: GGGCCCACCTGCCCCACTCCAGCCACAGGACCTGGC...GCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCAACACCTCCCGAGAGATaGCGCCCGCTCTTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPTPPER*RPLFAP
Trigger: GGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGT...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCACCCACTGCCGGCTCTaGATGGCAGCCACCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHATHCRL*MAATPR
Trigger: GCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCTGTCCCGGACCCACTaGCGGCTCTGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHALSRTH*RLCMAA
Trigger: GGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCAGGGCCTCCAGGCGCTaGCGGCTGCTCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLARASRR*RLLSFM
Trigger: CATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCT...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTGCGACCACAGCTCCCTaGAGCCTTGGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAATTAP*SLGLLG
Trigger: GCCCAGGAGGCCAAGGCTGCAGGGAGCTGTGGTCGC...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp GGCTCCAGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTGGGTGGGTAATACAGCTCTaGATGGGCAGACGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSRPRPCPCGALQGTKGGWVIQL*MGRREA
Trigger: TGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCA...CCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp AGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTGGGCACTGCATGCTGAGAGCAGGGTaGGGGCAATGTGGCTACCAG +
Preference number: 4 (lower is better)
Translates to: RPRPCPCGALQGTKGGHCMLRAG*GQCGYQ
Trigger: CTGGTAGCCACATTGCCCCCACCCTGCTCTCAGCAT...GCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCGCCCGCGGTGCAGTTTaGTCACACGCTGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAARGAV*SHAAPP
Trigger: AGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGC...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCCGAGCACTGCCCATaGGGAACCTGGACACGAGGG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAPEHCP*GTWTRG
Trigger: CCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTGCCGGAGGGCTTCCTTaGATCCCTTCCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAAGGLP*IPSQAG
Trigger: TCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGC...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCAGGGCCTCCAGGCGCTaGCGGCTGCTCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHARASRR*RLLSFM
Trigger: CATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCCGAGCTGCACGTCCTaGGTCACCAGCATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAPSCTS*VTSMPR
Trigger: CCTCGGCATGCTGGTGACGCAGGACGTGCAGCTCGG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCCGCGGATGGGTTCGATaGAGGTGGCGATCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLARGWVR*RWRSPR
Trigger: CCGAGGAGATCGCCACCTCCATCGAACCCATCCGCG...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCCGAGCCATCAGAGGCTaGACCGTCTCTCCGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLARAIRG*TVSPVW
Trigger: CCAGACCGGAGAGACGGTCCAGCCTCTGATGGCTCG...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCTGGCGGAGAAGCCCTaGGAGCTTCCTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPALAEKP*ELPAAV
Trigger: GACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCGCTCTGCGTGGGTTTaGTCCGCAAGAGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPARSAWV*SARDAP
Trigger: GGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCACCCCTCGCCCGCGGTaGAGTTTGATCACACGCTGC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHATPRPR*SLITRC
Trigger: GCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCGCCCTGAGAGCTTCCTaGAGCTGTCCCGGACCCACT +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAALRAS*SCPGPT
Trigger: AGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGC...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCTGCGTCACCAGCATaGCGAGGAGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAPASPA*RGARCC
Trigger: ACAGCACCGTGCTCCTCGGCATGCTGGTGACGCAGG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp GGCTCCAGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTGGGATCCACTTGATGTACTaGCTGCTCCTCGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: GSRPRPCPCGALQGTKGGIHLMY*LLLGRM
Trigger: CATTCTGCCGAGGAGCAGCCAGTACATCAAGTGGAT...CCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCACAGCTCCCTGGCAGTaGGTCAGGGTCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HSLLPAVVQVVIEAANTPTAPWQ*VRVLSP
Trigger: TGGGGAGAGGACCCTGACCCACTGCCAGGGAGCTGT...GGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACCCCTTCCATGTCCCATaGGAACCTCTGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: AGPHGDMSMCGCNPGVLDPFHVP*EPLAQL
Trigger: GAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGG...GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCCACGAGGGGTGTGCTTaGCAAGGACAGACACGTGGA +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLAHEGCA*QGQTRG
Trigger: TCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTG...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp AACGGATGTCGGTTCCCCTTCCATGTCCCATGGGAACCTCTGGCACAGCTCCCTTGCTCCTCGGCAGAATaGGAGACAGGACCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: NGCRFPFHVPWEPLAQLPCSSAE*ETGPAP
Trigger: CGGCGCTGGTCCTGTCTCTCATTCTGCCGAGGAGCA...AGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCCAAAGGAAAACTCGCTaGCCTGGGCAAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HSLLPAVVQVVIEAANTPQRKTR*PGQAPQ
Trigger: CTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCTTTG...GGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp GACAGGGAGGAAGGGGAAACACTGGGTGCCCAGGGGGATAGCATCTGTACATCTGCCCAGCTGGGGCTTTaGGGACACCGTTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DREEGETLGAQGDSICTSAQLGL*GHRSWA
Trigger: TGCCCAGGAACGGTGTCCTCAAAGCCCCAGCTGGGC...AGATGTACAGATGCTATCCCCCTGGGCACCCAGTGTTTCCCCTTCCTCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GACAGGGAGGAAGGGGAAACACTGGGTGCCCAGGGGGATAGCATCTGTACATCTGGGGCCTGTCCGAGTTaGGCTGGGTGCTGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: DREEGETLGAQGDSICTSGACPS*AGCCPS
Trigger: ACTCGGACAGCACCCAGCTCAACTCGGACAGGCCCC...AGATGTACAGATGCTATCCCCCTGGGCACCCAGTGTTTCCCCTTCCTCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACAGGGCGCTGAGAGATTaGGCAAAAGGCAGACAGGGA +
Preference number: 4 (lower is better)
Translates to: AGPHGDMSMCGCNPGVLDRALRD*AKGRQG
Trigger: TCCCTGTCTGCCTTTTGCTCAATCTCTCAGCGCCCT...GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp AGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTGGGCACTGCGAAGGGATTGGAAAATaGGACCAGCCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPRPCPCGALQGTKGGHCEGIGK*DQPLCP
Trigger: TGGACAGAGAGGCTGGTCTCATTTTCCAATCCCTTC...GCAGTGCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAACCCACTGCCGGCTCTaGATGGCAGCCACCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTATHCRL*MAATPR
Trigger: GCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGT...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGCCCTGAGAGCTTCCTaGAGCTGTCCCGGACCCACT +
Preference number: 4 (lower is better)
Translates to: ARGLFCCQGASFPEGAAAALRAS*SCPGPT
Trigger: AGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGC...AGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCCAGGCGCTGCCGGCTaGTCTCCTTCATGTTCACGA +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAPGAAG*SPSCSR
Trigger: TCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCATGAAGAGCCCGAGCTaGACGTCCTGCGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAMKSPS*TSCVTS
Trigger: GCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCAT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTACGATCTTGGCTCACTaGAAGCTCCGCCTCCCGCGT +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPATILAH*KLRLPR
Trigger: ACGCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCGT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCACGGTCTAGCCTCGCAGTaGTGCCGTGTGGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSRPPTPPQPQAFRLEAHGLASQ*CRVGLW
Trigger: CCACAGGCCCACACGGCAGCACTGCGAGGCTAGACC...GTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp TGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAACCACGGCCATGTCCTTaGGGTGCACTGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: CQLLFRLLSRPPTPPQPQPRPCP*GALQGT
Trigger: GGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGG...TTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCAGCTTCCAGGTGACTTaGTGGAGGGGGAGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HSLLPAVVQVVIEAANTPSFQVT*WRGRSP
Trigger: TGGGCTCCTCCCCCTCCAGCAAGTCACCTGGAAGCT...GGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCGGGTCTCTGCCCCACTaGGCTTGCATGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAGSLPH*ACMSDT
Trigger: TGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCC...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTTTCCCAACACCTTCATaGTCCAGGTCCGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAFPTPS*SRSGGQ
Trigger: CTGCCCTCCGGACCTGGATCATGAAGGTGTTGGGAA...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCACGAGGGGTGTGCTTaGCAAGGACAGACACGTGGA +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAHEGCA*QGQTRG
Trigger: TCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACCCGAGCACTGCCCATaGGGAACCTGGACACGAGGG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAPEHCP*GTWTRG
Trigger: CCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp GGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCACATAACACGACTGCACTaGCGCTCTGCTAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GAAAGHLSAHSPQTLPFHITRLH*RSARGL
Trigger: CAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTAT...GTGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp CCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCTTCCCTGCTGAGCTGTaGAAGGGCTTCCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PAVVQVVIEAANTPSASSFPAEL*KGFLRA
Trigger: CGCCCTCAGGAAGCCCTTTCACAGCTCAGCAGGGAA...GCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCAGTTTGATCACACGCTaGGCCACCTCCTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHASLITR*ATSSCS
Trigger: GGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTACCCACTGCCGGCTCTaGATGGCAGCCACCCCTCGC +
Preference number: 4 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTTHCRL*MAATPR
Trigger: GCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGT...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTCCGAGCTGCACGTCCTaGGTCACCAGCATGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSPSCTS*VTSMPR
Trigger: CCTCGGCATGCTGGTGACGCAGGACGTGCAGCTCGG...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp GCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTATGAAGAGCCCGAGCTaGACGTCCTGCGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: ARGLFCCQGASFPEGAAAMKSPS*TSCVTS
Trigger: GCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCAT...AGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTCACCCAGGCTAGAGTaGAGTGGTGCGACCACAGCT +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHASPRLE*SGATTA
Trigger: AGCTGTGGTCGCACCACTGCACTCTAGCCTGGGTGA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAACCAGGCACTCCCTGCTaGCAGCTGTTGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEPGTPC*QLLFRL
Trigger: CAACCTGAACAACAGCTGGCAGCAGGGAGTGCCTGG...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGAACAGCCCAGCTCCATaGAGACGTCCAGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLNSPAP*RRPAAP
Trigger: CGGAGCTGCTGGACGTCTCCATGGAGCTGGGCTGTT...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCCTACCAGGGGCTCGGTaGCTCGGAGACCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LLFRLLSRPPTPPQPQAFLPGAR*LGDPHL
Trigger: CAGATGGGGGTCTCCGAGCCACCGAGCCCCTGGTAG...GAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTGCAACCCCGGAGTCCTaGACGGAGGTGAAGGCACCC +
Preference number: 4 (lower is better)
Translates to: AVVQVVIEAANTPSASSIATPES*TEVKAP
Trigger: GGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGC...AATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCACCAGTCCCCTGGCAGTaGGTTCAGCTTTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SLLPAVVQVVIEAANTPSPVPWQ*VQLSMA
Trigger: GGCCATGGAAAGCTGAACCCACTGCCAGGGGACTGG...TGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCGTGGGGGAACCTAGGTaGTGTGGGGCCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VVIEAANTPSASSIQVGSVGEPR*CGARCP
Trigger: TGGACACCTGGCCCCACACCACCTAGGTTCCCCCAC...GCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 72 bp TTGAGCTGGGTGCTGTCCGAGTCGAGCTGGGTGTTGTaGGGTAATACAGCTCTGCATGGGCAGACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LSWVLSESSWVL*GNTALHGQTGG
Trigger: GCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCCAGCTCGACTCGGACAGCACCCAGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACTGGCGGAGAAGCCCTaGGAGCTTCCTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTALAEKP*ELPAAV
Trigger: GACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCTGCACGTGGGATGGTTaGATCTCTGGGCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLACTWDG*ISGLGQ
Trigger: TTGACCAAGCCCAGAGATTCAACCATCCCACGTGCA...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTCGCTCTGCGTGGGTTTaGTCCGCAAGAGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSRSAWV*SARDAP
Trigger: GGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCG...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp GTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCAGGGCGAGCAAGAGGCTaGGCGTGGTCACACTCAGTA +
Preference number: 4 (lower is better)
Translates to: VIEAANTPSASSIQVGSSGRARG*AWSHSV
Trigger: TACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCC...TGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp GGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGGGAGGTGAGGCCTCGTaGTTGCAGCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: GCYRGRQHPLSLKHSGWKGGEAS*LQLSTA
Trigger: TGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCC...CTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp CACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCCCACAAGACTCACCATaGGTCCGTCCTCCCACTTCT +
Preference number: 4 (lower is better)
Translates to: HSLLPAVVQVVIEAANTPPQDSP*VRPPTS
Trigger: AGAAGTGGGAGGACGGACTCATGGTGAGTCTTGTGG...GGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GAAGGCACCCAGGATGAAAGGACTCAGGTGGGGTGGGCTTCGCACGGACCCCTACCTGGTCTCAGATGTTaGTCCGGTAGGATTTCACCG +
Preference number: 4 (lower is better)
Translates to: EGTQDERTQVGWASHGPLPGLRC*SGRISP
Trigger: CGGTGAAATCCTACCGGATCAACATCTGAGACCAGG...TAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCATCCTGGGTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp TCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGGCCGTGCTGAAGAATaGGGAGCATCACAGACTCGG +
Preference number: 4 (lower is better)
Translates to: SLLPAVVQVVIEAANTPSGRAEE*GASQTR
Trigger: CCGAGTCTGTGATGCTCCTCATTCTTCAGCACGGCC...TGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCGGCCTCACGGTGACATaGGCATGTGTGGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: VVIEAANTPSASSIQVGSGLTVT*ACVAAT
Trigger: GGTTGCAGCCACACATGCTCATGTCACCGTGAGGCC...GCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAACCCCTCGCCCGCGGTaGAGTTTGATCACACGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTATPRPR*SLITRC
Trigger: GCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGT...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTGGACACGAGGGGTGTaGTTGACAAGGACAGACACG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAWTRGV*LTRTDT
Trigger: CGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTGCCGAGGAGCACGGTaGTGTAGTCAATGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHACRGAR*CSQCRL
Trigger: AAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCACGTGAGGCCTCGTGATTaGAGCTCTCCACAGCACCGG +
Preference number: 4 (lower is better)
Translates to: LSRPPTPPQPQAFRLEAHVRPRD*SSPQHR
Trigger: CCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCAC...GTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR GCA 90 bp TGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCACTAGCCTCGCAGTGCTaGCGTGTGGGCCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: CCSGCYRGRQHPLSLKHSLASQC*RVGLWV
Trigger: GACCCACAGGCCCACACGGCAGCACTGCGAGGCTAG...TGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp GTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCATGGTGTGAGCTCTaGACTGGAGGAGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: VVIEAANTPSASSIQVGSSWCEL*TGGAPR
Trigger: ACGGGGCGCTCCTCCAGTGCAGAGCTCACACCATGA...GCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCGTGTCCACACCCCAGTaGAGAAACGGATGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: PAASCCSGCYRGRQHPLSVSTPQ*RNGCRF
Trigger: GAACCGACATCCGTTTCTGCACTGGGGTGTGGACAC...GCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCAGAACTGCATTCTTCTaGCGGAGAAGCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLARTAFF*RRSPES
Trigger: GCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCT...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp GGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCACACACGTGGAGCCCTATaGAGGCGAAGAAAACGATGG +
Preference number: 4 (lower is better)
Translates to: GAAAGHLSAHSPQTLPFHTRGAL*RRRKRW
Trigger: CCATCGTTTTCTTCGCCTCCATAGGGCTCCACGTGT...GTGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp GCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTGCAGGTGGGCCCAGCTaGGGCTTTGAGGACACCGTT +
Preference number: 4 (lower is better)
Translates to: AVVQVVIEAANTPSASSIAGGPS*GFEDTV
Trigger: AACGGTGTCCTCAAAGCCCCAGCTGGGCCCACCTGC...AATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACAAGAAAGGGTTCTGCTaGGTCAGCATGGGACAAACG +
Preference number: 4 (lower is better)
Translates to: AGPHGDMSMCGCNPGVLDKKGFC*VSMGQT
Trigger: CGTTTGTCCCATGCTGACCCAGCAGAACCCTTTCTT...GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTGTCCGAGTTGAGCTaGGTGCTGTCCGAGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GCYRGRQHPLSLKHSGWKLSELS*VLSESS
Trigger: GCTCGACTCGGACAGCACCCAGCTCAACTCGGACAG...CTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CCCAAGCTCTTACTTTCCCGGGGCCTGTCCGAGTTGAGCTGGGTGCTGTCCGAGAGGACACCACAGTCATaGTGTGAGCTCTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PKLLLSRGLSELSWVLSERTPQS*CELCTG
Trigger: TCCAGTGCAGAGCTCACACCATGACTGTGGTGTCCT...CTCGGACAGCACCCAGCTCAACTCGGACAGGCCCCGGGAAAGTAAGAGCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp ACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCTCTGTCCAGTCCCCTaGCAGTGGGTTCAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: TPCCQLLFRLLSRPPTPPLCPVP*QWVQLS
Trigger: GGAAAGCTGAACCCACTGCCAGGGGACTGGACAGAG...AGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTCTGGCGGAGAAGCCCTaGGAGCTTCCTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTLAEKP*ELPAAV
Trigger: GACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAG...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTGCACGTGGGATGGTTaGATCTCTGGGCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHACTWDG*ISGLGQ
Trigger: TTGACCAAGCCCAGAGATTCAACCATCCCACGTGCA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCAACAGACACGTGGAAATaGAGACGCTCTGCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPTDTWK*RRSAWV
Trigger: AACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGT...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTACAGACACGTGGAAATaGAGACGCTCTGCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPATDTWK*RRSAWV
Trigger: AACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACAAAGGAAAACTCGCTaGCCTGGGCAAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAQRKTR*PGQAPQ
Trigger: CTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCTTTG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp CTGGTTAGCCTCCAGCAAACATGTCCCCACAAGACTCACCATGAGTCCGTCCTCGGGCGAGCAAGAGGCTaGGCGTGGTCACACTCAGTA +
Preference number: 4 (lower is better)
Translates to: LVSLQQTCPHKTHHESVLGRARG*AWSHSV
Trigger: TACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCC...GAGGACGGACTCATGGTGAGTCTTGTGGGGACATGTTTGCTGGAGGCTAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CCCAAGCTCTTACTTTCCCGGGGCCTGTCCGAGTTGAGCTGGGTGCTGTCCGAGTCTGGAAGGTCTGGATaGAAGAGGAGTCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: PKLLLSRGLSELSWVLSESGRSG*KRSHEV
Trigger: GACCTCATGACTCCTCTTTCATCCAGACCTTCCAGA...CTCGGACAGCACCCAGCTCAACTCGGACAGGCCCCGGGAAAGTAAGAGCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCAGGGCACAGGCCGTGCTaGAGAATGAGGAGCATCACA +
Preference number: 4 (lower is better)
Translates to: VIEAANTPSASSIQVGSSGHRPC*RMRSIT
Trigger: TGTGATGCTCCTCATTCTTCAGCACGGCCTGTGCCC...TGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACCAGGCGCTGCCGGCTaGTCTCCTTCATGTTCACGA +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAPGAAG*SPSCSR
Trigger: TCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGTGGACACGAGGGGTGTaGTTGACAAGGACAGACACG +
Preference number: 4 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLWTRGV*LTRTDT
Trigger: CGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCA...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp GCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTTGCCGAGGAGCACGGTaGTGTAGTCAATGTCGCCTT +
Preference number: 4 (lower is better)
Translates to: ARGLFCCQGASFPEGAAACRGAR*CSQCRL
Trigger: AAGGCGACATTGACTACAGCACCGTGCTCCTCGGCA...AGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTGACAATGCTAGAAGATaGACTGGCGCCCGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPADNARR*TGARLY
Trigger: ATACAGGCGGGCGCCAGTGCATCTTCTAGCATTGTC...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCGTGAGGCCTCGTGATTaGAGCTCTCCACAGCACCGG +
Preference number: 4 (lower is better)
Translates to: LLFRLLSRPPTPPQPQAFVRPRD*SSPQHR
Trigger: CCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCAC...GAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTGATCTGCACGTGGGATaGTTGAATCTCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPADLHVG*LNLWAW
Trigger: CCAAGCCCAGAGATTCAACCATCCCACGTGCAGATC...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCATCCACTTGATGTACTaGCTGCTCCTCGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLAIHLMY*LLLGRM
Trigger: CATTCTGCCGAGGAGCAGCCAGTACATCAAGTGGAT...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAGAAAACTCGCTGACCTaGGCAAGCCCCGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAENSLT*ASPAET
Trigger: CGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTC...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTAGTCTCTCCAGCAGCTaGTCTATACATGAGCGCGAC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPASLSSS*SIHERD
Trigger: GTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp TTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCACCTCGAGACAGGAGACTaGACCACCCAGGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LSRPPTPPQPQAFRLEAHLETGD*TTQVSA
Trigger: AGCACTGACCTGGGTGGTCCAGTCTCCTGTCTCGAG...GTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCATCATCAGGGAAGTATaGGGTGGGGAAGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: HSLLPAVVQVVIEAANTPIIREV*GGEARR
Trigger: TCTCCTGGCTTCCCCACCCCATACTTCCCTGATGAT...GGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GGGCTCGGTGGCTCGGAGACCCCCATCTGGATGACAGGGGCAGACATGATGGGGCAAACCAGAACATTCTaGAGAGAACCTCCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLGGSETPIWMTGADMMGQTRTF*REPPVF
Trigger: GAAGACTGGAGGTTCTCTCCAGAATGTTCTGGTTTG...CCCCATCATGTCTGCCCCTGTCATCCAGATGGGGGTCTCCGAGCCACCGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 72 bp GAGTTGAGCTGGGTGCTGTCCGAGTCGAGCTGGGTGTaGTTGGGTAATACAGCTCTGCATGGGCAGACGGGA +
Preference number: 4 (lower is better)
Translates to: ELSWVLSESSWV*LGNTALHGQTG
Trigger: TCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCCAGCTCGACTCGGACAGCACCCAGCTCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTGGGTCTCTGCCCCACTaGGCTTGCATGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSGSLPH*ACMSDT
Trigger: TGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCC...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp GGGTGTTGTTGGGTAATACAGCTCTGCATGGGCAGACGGGAGGCAGCTTTTGGGCAGAGACGATCCACTTaGTGTACTGGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GCCWVIQLCMGRREAAFGQRRST*CTGCSS
Trigger: CGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTG...CCCAAAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGCTGTCCCGGACCCACTaGCGGCTCTGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQLSRTH*RLCMAA
Trigger: GGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAG...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCTCCACCCTCAGAACTaGCTCAAAATTGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHALHPQN*LKIDPL
Trigger: AAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTTTGATCCGCAAGAGATaGCCCCACAGCAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPALIRKR*PHSKPN
Trigger: ATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAA...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCGAAATGAAGACGCTCTaGGTGGGTTTGATCCGCAAG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAEMKTL*VGLIRK
Trigger: CTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTC...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCGTCAAGAAAGGGTTCTaGTGGGTCAGCATGGGACAA +
Preference number: 4 (lower is better)
Translates to: HSLLPAVVQVVIEAANTPVKKGF*WVSMGQ
Trigger: TTGTCCCATGCTGACCCAGCAGAACCCTTTCTTGAC...GGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAACTGCCGGCTCTGCATaGCAGCCACCCCTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQTAGSA*QPPLAR
Trigger: GCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGT...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTAACGTGGGGAACACGTaGAGCCCTATGGAGGCGAAG +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSNVGNT*SPMEAK
Trigger: CTTCGCCTCCATAGGGCTCCACGTGTTCCCCACGTT...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp AACGGATGTCGGTTCCCCTTCCATGTCCCATGGGAACCTCTGGCACAGCTCCCTGTGGGGATGAGCACGTaGTTACAGGAATGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NGCRFPFHVPWEPLAQLPVGMST*LQEWAE
Trigger: TTCAGCCCATTCCTGTAACCACGTGCTCATCCCCAC...AGGGAGCTGTGCCAGAGGTTCCCATGGGACATGGAAGGGGAACCGACATCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTGTCTTCAGGCCCCTGTaGGGGAACCTAGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSVFRPL*GNLGGV
Trigger: CACACCACCTAGGTTCCCCCACAGGGGCCTGAAGAC...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTTTCCCAACACCTTCATaGTCCAGGTCCGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTFPTPS*SRSGGQ
Trigger: CTGCCCTCCGGACCTGGATCATGAAGGTGTTGGGAA...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGGCCCGCGGTGCAGTTTaGTCACACGCTGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQARGAV*SHAAPP
Trigger: AGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGC...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAATAACACGACTGCACTaGCGCTCTGCTAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAITRLH*RSARGL
Trigger: CAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTAT...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGGCACCACATTCAAGGTaGTCGGTAAAACGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLAPHSR*SVKRSV
Trigger: GACACTGCGTTTTACCGATCACCTTGAATGTGGTGC...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAGTGACCACGGGGCCCTaGGAGGAGACGAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQVTTGP*EETSAP
Trigger: TGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCAC...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACAGAGACGATCCACTTaGTGTACTGGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAQRRST*CTGCSS
Trigger: CGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp CCCAAGCTCTTACTTTCCCGGGGCCTGTCCGAGTTGAGCTGGGTGCTGTCCGAGATTAAATTTTGGCTGTaGGTTCCCATCTACCTGGCC +
Preference number: 4 (lower is better)
Translates to: PKLLLSRGLSELSWVLSEIKFWL*VPIYLA
Trigger: GGCCAGGTAGATGGGAACTCACAGCCAAAATTTAAT...CTCGGACAGCACCCAGCTCAACTCGGACAGGCCCCGGGAAAGTAAGAGCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCACTCCAGACGATCCGCTaGCTTTCTTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPLQTIR*LSYIFK
Trigger: CTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAG...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCTCCAGACGATCCGCTaGCTTTCTTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHALQTIR*LSYIFK
Trigger: CTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp ACTTCCATAAGCCTGGTCTCAGATGTTGATCCGGTAGGATTTCACCGTAACCTGAGGGTGGGGGCAATGTaGCTACCAGGGGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: TSISLVSDVDPVGFHRNLRVGAM*LPGARW
Trigger: CCACCGAGCCCCTGGTAGCCACATTGCCCCCACCCT...CAGGTTACGGTGAAATCCTACCGGATCAACATCTGAGACCAGGCTTATGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTGGCCGTGTAAGCTCATaGCTGGAGCTCGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSGRVSS*LELETG
Trigger: TCCTGTCTCGAGCTCCAGCCATGAGCTTACACGGCC...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCTGGGCCTCACGGTGACATGAGCATGTGTGGCTGCAACCCCGGAGTCCTGGACCGCCTTCCCCAAGACTaGGTAATTTATAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGPHGDMSMCGCNPGVLDRLPQD*VIYKGN
Trigger: GTTTCCTTTATAAATTACCCAGTCTTGGGGAAGGCG...GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCATGTCACCGTGAGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CAGCCTCAAGCATTCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTAGGACTCAGGTGGGGTaGGCTTCGCACGGACCCCTA +
Preference number: 4 (lower is better)
Translates to: QPQAFRLEAHFHKPGLRCRTQVG*ASHGPL
Trigger: TAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCT...ACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
3UTR CAA 72 bp AGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTaGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: RPPTPPQPQAFR*EAHFHKPGLRC
Trigger: ACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAGCCCGCGGTGCAGTTTaGTCACACGCTGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQARGAV*SHAAPP
Trigger: AGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGC...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTCAAACGTGTGCACCTaGAACAGTTTCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHASNVCT*NSFSSS
Trigger: GGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR TCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTTGCACGTGGGATGGTTaGATCTCTGGGCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSCTWDG*ISGLGQ
Trigger: TTGACCAAGCCCAGAGATTCAACCATCCCACGTGCA...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp CCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCGACCCCTCAATCCTTTaGACACTCCATCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PAVVQVVIEAANTPSASSDPSIL*TLHLFC
Trigger: GCAAAAGAGATGGAGTGTTCAAAGGATTGAGGGGTC...GCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCACGTCTTTCTCCACTaGTCCAATTGCAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAHVFLH*SNCSFQ
Trigger: CTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAAGGGCCTCCAGGCGCTaGCGGCTGCTCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQRASRR*RLLSFM
Trigger: CATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCT...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTTGGACACGAGGGGTGTaGTTGACAAGGACAGACACG +
Preference number: 4 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTWTRGV*LTRTDT
Trigger: CGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCA...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAAGAGGGCTGTTCTGTTaGCTTCTTTGTCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTARGLFC*LLCHPE
Trigger: CTCGGGGTGACAAAGAAGGCAACAGAACAGCCCTCT...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375391.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTTTTCTTTGTTCCCCTTaGTTTCCATGTGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAFLCSP*FPCAAS
Trigger: GGAAGCTGCACATGGAAAGCAAGGGGAACAAAGAAA...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp GGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGGCAGAGACCCTAGCATaGTTTCTCTCGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: GCYRGRQHPLSLKHSGWKAETLA*FLSSFR
Trigger: CCTGAATGACGAGAGAAAGCATGCTAGGGTCTCTGC...CTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR GCA 90 bp TGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCACACAAACCTGTCGCTaGTCTCAGGAGAAGCATCCT +
Preference number: 4 (lower is better)
Translates to: CYRGRQHPLSLKHSGWKLTQTCR*SQEKHP
Trigger: AGGATGCTTCTCCTGAGAGCAGCGACAGGTTTGTGT...GAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAATATGGGTGTCTCTCCTaGTCTCAGAATCAAACCAGA +
Preference number: 4 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEYGCLS*SQNQTR
Trigger: TCTGGTTTGATTCTGAGAGCAGGAGAGACACCCATA...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTGATCTGCACGTGGGATaGTTGAATCTCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSDLHVG*LNLWAW
Trigger: CCAAGCCCAGAGATTCAACCATCCCACGTGCAGATC...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp TCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTGATCCGGTAGGAGAAAACTCGCTGACCTaGGCAAGCCCCGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: SGWKLTSISLVSDVDPVGENSLT*ASPAET
Trigger: CGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTC...TCCTACCGGATCAACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGTCAAACGTGTGCACCTaGAACAGTTTCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLSNVCT*NSFSSS
Trigger: GGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGA...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTGCACCACATTCAAGGTaGTCGGTAAAACGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSAPHSR*SVKRSV
Trigger: GACACTGCGTTTTACCGATCACCTTGAATGTGGTGC...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAATGCTCCTCGGCAGAATaGGAGACAGGACCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQCSSAE*ETGPAP
Trigger: CGGCGCTGGTCCTGTCTCTCATTCTGCCGAGGAGCA...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGGGGCGAGCAAGAGGCTaGGCGTGGTCACACTCAGTA +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQGRARG*AWSHSV
Trigger: TACTGAGTGTGACCACGCTCAGCCTCTTGCTCGCCC...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp TTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTGACTCCACTGTATCCTaGATGCCTGCTACGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LLSRPPTPPQPQAFRLEADSTVS*MPATVQ
Trigger: TTGAACCGTAGCAGGCATTCAGGATACAGTGGAGTC...AGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAACCCCTCGCCCGCGGTaGAGTTTGATCACACGCTGC +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQTPRPR*SLITRC
Trigger: GCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGT...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCTCCACTGCTCCAATTaGAGTTTTCAGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHALHCSN*SFQFVQ
Trigger: CTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAG...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp GCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTCACGTCTTTCTCCACTaGTCCAATTGCAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ARGLFCCQGASFPEGAAAHVFLH*SNCSFQ
Trigger: CTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTG...AGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACTCCACCCTCAGAACTaGCTCAAAATTGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTALHPQN*LKIDPL
Trigger: AAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAGAAATGAAGACGCTCTaGGTGGGTTTGATCCGCAAG +
Preference number: 4 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAEMKTL*VGLIRK
Trigger: CTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTC...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCAAAAAGTCACCCTGTTaGAGAGACTCCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: PAVVQVVIEAANTPSASSKKSPC*RDSTVS
Trigger: GGATACAGTGGAGTCTCTGCAACAGGGTGACTTTTT...GCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGATCTGCACGTGGGATaGTTGAATCTCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTDLHVG*LNLWAW
Trigger: CCAAGCCCAGAGATTCAACCATCCCACGTGCAGATC...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp CCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCATTCAAAATGAGATTTaGGTGGGGACACAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: PAASCCSGCYRGRQHPLSIQNEI*VGTQPN
Trigger: GTTTGGCTGTGTCCCCACCCAAATCTCATTTTGAAT...GCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TATGCAAGCTCTATGACATCTGACCCTCTAACAGTTTCGCACCTTAGAGGGAGCTGGACTCTGCGGACTTaGGGCAAAGGGTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: YASSMTSDPLTVSHLRGSWTLRT*GKGWWV
Trigger: CACCCACCACCCTTTGCCCCAAGTCCGCAGAGTCCA...GCTCCCTCTAAGGTGCGAAACTGTTAGAGGGTCAGATGTCATAGAGCTTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp GAACAGGGAACACTTCTGCACTGCTGGTGGGAGCGTAAACTAGCACAACCACTATGCACGTGGGATGGTTaGATCTCTGGGCTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: EQGTLLHCWWERKLAQPLCTWDG*ISGLGQ
Trigger: TTGACCAAGCCCAGAGATTCAACCATCCCACGTGCA...TAGTGGTTGTGCTAGTTTACGCTCCCACCAGCAGTGCAGAAGTGTTCCCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGCACGAGGGGTGTGCTTaGCAAGGACAGACACGTGGA +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQHEGCA*QGQTRG
Trigger: TCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTG...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAGGAACACCAGCACCGTaGGCTCGTACGCCACAAACG +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQGTPAP*ARTPQT
Trigger: CGTTTGTGGCGTACGAGCTCACGGTGCTGGTGTTCC...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR TCA 90 bp AGTGATCAGTTAGGCAGAGACCCTAGCATGCTTTCTCTCGTCATTCAGGGCACTCAGAGACGATCCACTTaGTGTACTGGCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SDQLGRDPSMLSLVIQGTQRRST*CTGCSS
Trigger: CGAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTG...AGTGCCCTGAATGACGAGAGAAAGCATGCTAGGGTCTCTGCCTAACTGATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp TTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTACACCTCCCGAGAGATaGCGCCCGCTCTTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: FLSSFRALLISSCRERLITPPER*RPLFAP
Trigger: GGGCGCGAAGAGCGGGCGTCATCTCTCGGGAGGTGT...AATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGTGGGCACACACCTCGTaGTTGCAGCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQWAHTS*LQLSTA
Trigger: TGCTGTGGAGAGCTGCAATCACGAGGTGTGTGCCCA...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp ACTCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTTGTATCCTGAATGCCTaGTACGGTTCAAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: TPCCQLLFRLLSRPPTPPCILNA*YGSNAS
Trigger: AGAAGCATTTGAACCGTAGCAGGCATTCAGGATACA...AGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATGTCCTTGCGGTGCACTaGAGGGCACCAAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLVIQGTSYFILQREANVLAVH*RAPRVG
Trigger: GCCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGAC...ATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCTCATTCAGCTCTTTCTaGAAAATTTCAAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLASFSSF*KISNVC
Trigger: GCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGA...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTATATACTGGTTGTTCTaGGAGTCAATCAGCATGCTA +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAIYWLF*ESISML
Trigger: TAGCATGCTGATTGACTCCCAGAACAACCAGTATAT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTGGATGGTTGAATCTCTaGGCTTGGTCAAAATATACT +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAGWLNL*AWSKYT
Trigger: AGTATATTTTGACCAAGCCCAGAGATTCAACCATCC...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp CATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCGAAAACTCGCTGACCTaGGCAAGCCCCGCAGAGACG +
Preference number: 4 (lower is better)
Translates to: HAFSRHSGHFLFHLAERGENSLT*ASPAET
Trigger: CGTCTCTGCGGGGCTTGCCCAGGTCAGCGAGTTTTC...GCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CCA 90 bp ACTTCCATAAGCCTGGTCTCAGATGTTGATCCGGTAGGATTTCACCGTAACCTGTCTGCTGGGTCAGCATaGGACAAACGGGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TSISLVSDVDPVGFHRNLSAGSA*DKRAGH
Trigger: GTGACCTGCCCGTTTGTCCCATGCTGACCCAGCAGA...CAGGTTACGGTGAAATCCTACCGGATCAACATCTGAGACCAGGCTTATGGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp AGGGGAAGCAGACACATCCTTATTCACAAGGCAGCAGGATGGAGAAGCGAGAGCCGAGCTGGGTGTTGTTaGGTAATACAGCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: RGSRHILIHKAAGWRSESRAGCC*VIQLCM
Trigger: CATGCAGAGCTGTATTACCCAACAACACCCAGCTCG...GCTCTCGCTTCTCCATCCTGCTGCCTTGTGAATAAGGATGTGTCTGCTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp ATTGACTTGCAGTTCTCCATGGCTGGGGAGACCTCAGGAAACACAATCACGGCAGAGTCCCTGGGAAGCTaGCAGCAGCAGTGTTATTTG +
Preference number: 4 (lower is better)
Translates to: IDLQFSMAGETSGNTITAESLGS*QQQCYL
Trigger: CAAATAACACTGCTGCTGCCAGCTTCCCAGGGACTC...TGCCGTGATTGTGTTTCCTGAGGTCTCCCCAGCCATGGAGAACTGCAAGTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCCTTCTGGAAGGGATTaGAAAATGAGACCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLSRPPTPPQPQAFRLEAPSGRD*KMRPAS
Trigger: AGAGGCTGGTCTCATTTTCCAATCCCTTCCAGAAGG...AGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CTGGCCAGAAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTGCTCTCAGATCTGGCACAGCTCCCTaGCAGTGGGTCAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LARNLTPIIFMGVSPALRSGTAP*QWVRVL
Trigger: GAGGACCCTGACCCACTGCCAGGGAGCTGTGCCAGA...TCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTTCTGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAGGGTCTCTGCCCCACTaGGCTTGCATGTCAGACACA +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQGSLPH*ACMSDT
Trigger: TGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCC...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp CATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCAGAGGCCTCGCTGGTTaGGAATGGCTGGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: HAFSRHSGHFLFHLAERGRGLAG*EWLVLG
Trigger: CCCCAAAACCAGCCATTCTCAACCAGCGAGGCCTCT...GCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp CCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCACTTCCATAAGCCTAGCAGCAGTGTTATTTaGAGGACACCACAGTCATGG +
Preference number: 4 (lower is better)
Translates to: PTPPQPQAFRLEAHFHKPSSSVI*RTPQSW
Trigger: CCATGACTGTGGTGTCCTTCAAATAACACTGCTGCT...AGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp TCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTGGCTGGGCCTCACGGTaGCATGAGCATGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFRALLISSCRERLISCGWASR*HEHVWL
Trigger: CAGCCACACATGCTCATGTCACCGTGAGGCCCAGCC...ACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGGCCGGAGGGCTTCCTTaGATCCCTTCCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQAGGLP*IPSQAG
Trigger: TCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGC...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAAGTTTGATCACACGCTaGGCCACCTCCTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQSLITR*ATSSCS
Trigger: GGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACT...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACTGTCCCGGACCCACTaGCGGCTCTGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITLSRTH*RLCMAA
Trigger: GGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCTTGATGTTTTTCTGCTaGCAGAAGTTCCATATATTC +
Preference number: 4 (lower is better)
Translates to: EGCSVAKVRASQKEQLLALMFFC*QKFHIF
Trigger: GAATATATGGAACTTCTGGCAGCAGAAAAACATCAA...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGGTTCTGTTGCCAAGGTaGGAGCTTCCCAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQVLLPR*ELPRRS
Trigger: GCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAAC...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp GGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGTTCTTTCTAGTGACATaGTACACACTGGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: GCYRGRQHPLSLKHSGWKFFLVT*YTLGKC
Trigger: GCATTTCCCCAGTGTGTAGCATGTCACTAGAAAGAA...CTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp CATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCCCAGGCACTCCCTGCTaGCAGCTGTTGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HAFSRHSGHFLFHLAERGPGTPC*QLLFRL
Trigger: CAACCTGAACAACAGCTGGCAGCAGGGAGTGCCTGG...GCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR GCA 90 bp ATGTTGGCAGGGATGTGGGGAACAGGGAACACTTCTGCACTGCTGGTGGGAGCGAATCTGGTTCAAGAATaGCTGTTACATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: MLAGMWGTGNTSALLVGANLVQE*LLHLTV
Trigger: GACTGTCAGATGTAACAGGCATTCTTGAACCAGATT...CGCTCCCACCAGCAGTGCAGAAGTGTTCCCTGTTCCCCACATCCCTGCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTCATTCAGCTCTTTCTaGAAAATTTCAAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: SSQLSLSSSWSIHERDHASFSSF*KISNVC
Trigger: GCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGATATACTGGTTGTTCTaGGAGTCAATCAGCATGCTA +
Preference number: 4 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLIYWLF*ESISML
Trigger: TAGCATGCTGATTGACTCCCAGAACAACCAGTATAT...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCATTGGTCAAAATATACTaGTTGTTCTGGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPLVKIY*LFWESI
Trigger: GATTGACTCCCAGAACAACCAGTATATTTTGACCAA...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTTTGGTCAAAATATACTaGTTGTTCTGGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPALVKIY*LFWESI
Trigger: GATTGACTCCCAGAACAACCAGTATATTTTGACCAA...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGAGGCGAAGAAAACGATaGCCAGGAAGTCGCGGATGG +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQRRRKR*PGSRGW
Trigger: CCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCT...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCGCTAATTTCGTGTTTTaGGGGGAGTTTGATGTTACT +
Preference number: 4 (lower is better)
Translates to: PAVVQVVIEAANTPSASSANFVF*GEFDVT
Trigger: AGTAACATCAAACTCCCCCCAAAACACGAAATTAGC...GCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CCA 90 bp GCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCTCAAGCATTCAGGTTaGAAGCTCACTTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: AVVQVVIEAANTPSASSILKHSG*KLTSIS
Trigger: GCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAG...AATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CCA 90 bp TCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTGATCCGGTAGGAACTTGCAGTTCTCCATaGCTGGGGAGACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGWKLTSISLVSDVDPVGTCSSP*LGRPQE
Trigger: TTCCTGAGGTCTCCCCAGCCATGGAGAACTGCAAGT...TCCTACCGGATCAACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCATCCTCCTTCCTTCTaGAAGGGATTGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: AVVQVVIEAANTPSASSIHPPSF*KGLENE
Trigger: CTCATTTTCCAATCCCTTCCAGAAGGAAGGAGGATG...AATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCGCTCTGCGTGGGTTTaGTCCGCAAGAGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQRSAWV*SARDAP
Trigger: GGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGACAGACACGTGGAAATaGAGACGCTCTGCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQTDTWK*RRSAWV
Trigger: AACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGT...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACCCGAGCACTGCCCATaGGGAACCTGGACACGAGGG +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITPEHCP*GTWTRG
Trigger: CCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp TCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGGAGGTGAGGCCTCGTaGTTGCAGCTCTCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SLVIQGTSYFILQREANFGGEAS*LQLSTA
Trigger: TGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCC...GAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp TGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGATTACAATTCAAAATaGGATTTGGGTGGGGACACA +
Preference number: 4 (lower is better)
Translates to: CQLLFRLLSRPPTPPQPQDYNSK*DLGGDT
Trigger: TGTGTCCCCACCCAAATCTCATTTTGAATTGTAATC...TTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCCGGAGGGCTTCCTTaGATCCCTTCCCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITAGGLP*IPSQAG
Trigger: TCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGC...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTCTCCACTGCTCCAATTaGAGTTTTCAGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSLHCSN*SFQFVQ
Trigger: CTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAG...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTTTGATGTTTTTCTGCTaGCAGAAGTTCCATATATTC +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPALMFFC*QKFHIF
Trigger: GAATATATGGAACTTCTGGCAGCAGAAAAACATCAA...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCAAACTTGATGTTTTTCTaGTGCCAGAAGTTCCATATA +
Preference number: 4 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPNLMFF*CQKFHI
Trigger: TATATGGAACTTCTGGCAGCAGAAAAACATCAAGTT...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTAACTTGATGTTTTTCTaGTGCCAGAAGTTCCATATA +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPANLMFF*CQKFHI
Trigger: TATATGGAACTTCTGGCAGCAGAAAAACATCAAGTT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCCTAATGTCTCCACTTaGACAATAGACTTAATACTA +
Preference number: 4 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAPNVST*TIDLIL
Trigger: TAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR GCA 90 bp ATTGACTTGCAGTTCTCCATGGCTGGGGAGACCTCAGGAAACACAATCACGGCACCACTGTATCCTGAATaGCTGCTACGGTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: IDLQFSMAGETSGNTITAPLYPE*LLRFKC
Trigger: GCATTTGAACCGTAGCAGGCATTCAGGATACAGTGG...TGCCGTGATTGTGTTTCCTGAGGTCTCCCCAGCCATGGAGAACTGCAAGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp ATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTGGGCCATGTCCTTGCGGTaGACTGCAGGGCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: IQGTSYFILQREANFVFWAMSLR*TAGHQG
Trigger: CCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGC...CCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp ATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTATGAGCATGTGTGGCTaGAACCCCGGAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: MLSLVIQGTSYFILQREAMSMCG*NPGVLD
Trigger: GTCCAGGACTCCGGGGTTGCAGCCACACATGCTCAT...AGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp ACGAAAAAGAGACTTGCATGCACATGTCTAGAGCAGCACGATTTGCAGTTGCAAGGGAGCAGTGTACACTaGTCTGGTGACAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: TKKRLACTCLEQHDLQLQGSSVH*SGDRCT
Trigger: GGTGCACCTGTCACCAGAGCAGTGTACACTGCTCCC...TTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCAAGTCTCTTTTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp TGTAAGAATGACACACTGGACTCTGCGGACTTGGGGCAAAGGGTGGTGGGTGGCTACGAAAAAGAGACTTaGATGCACATGTCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: CKNDTLDSADLGQRVVGGYEKET*MHMSRA
Trigger: TGCTCTAGACATGTGCATGCAAGTCTCTTTTTCGTA...GCCACCCACCACCCTTTGCCCCAAGTCCGCAGAGTCCAGTGTGTCATTCTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATGAAAGGACTCAGGTaGGGTGGGCTTCGCACGGAC +
Preference number: 4 (lower is better)
Translates to: CFLSSFRALLISSCRERLMKGLR*GGLRTD
Trigger: GTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCAT...TAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp ATGTTGGCAGGGATGTGGGGAACAGGGAACACTTCTGCACTGCTGGTGGGAGCGAGAGTAATGGGAAGATaGAAAAACGGAGCTTTTAGT +
Preference number: 4 (lower is better)
Translates to: MLAGMWGTGNTSALLVGARVMGR*KNGAFS
Trigger: ACTAAAAGCTCCGTTTTTCCATCTTCCCATTACTCT...CGCTCCCACCAGCAGTGCAGAAGTGTTCCCTGTTCCCCACATCCCTGCCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCCCTGAGAGCTTCCTaGAGCTGTCCCGGACCCACT +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITALRAS*SCPGPT
Trigger: AGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGC...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGTTGATCCGCAAGAGATaGCCCCACAGCAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQLIRKR*PHSKPN
Trigger: ATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAA...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACCTGCGTCACCAGCATaGCGAGGAGCACGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITPASPA*RGARCC
Trigger: ACAGCACCGTGCTCCTCGGCATGCTGGTGACGCAGG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp AGCCTCAAGCATTCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTGCAGAGACCCTAGCATaGTTTCTCTCGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: SLKHSGWKLTSISLVSDVAETLA*FLSSFR
Trigger: CCTGAATGACGAGAGAAAGCATGCTAGGGTCTCTGC...AACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR GCA 90 bp TATGCAAGCTCTATGACATCTGACCCTCTAACAGTTTCGCACCTTAGAGGGAGCGAACTGACCGTTAGATaGTCAGGACTGGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: YASSMTSDPLTVSHLRGSELTVR*SGLVPL
Trigger: CAGTGGAACCAGTCCTGAGCATCTAACGGTCAGTTC...GCTCCCTCTAAGGTGCGAAACTGTTAGAGGGTCAGATGTCATAGAGCTTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAAGAACTGCATTCTTCTaGCGGAGAAGCCCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQRTAFF*RRSPES
Trigger: GCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCT...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp AGCCTCAAGCATTCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTACACAGAGGCCTCGCTaGTTGAGAATGGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLKHSGWKLTSISLVSDVTQRPR*LRMAGF
Trigger: AAAACCAGCCATTCTCAACCAGCGAGGCCTCTGTGT...AACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCAGCAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTGAGCTCTGCACTGCCCCAATCATTTTTATaGGTGTCTCTCCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: AAAVLFEGHHSHGVSSALPQSFL*VSLLLS
Trigger: TGAGAGCAGGAGAGACACCCATAAAAATGATTGGGG...CAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp TCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTCAAAGGAAAACTCGCTaGCCTGGGCAAGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SFRALLISSCRERLISCFQRKTR*PGQAPQ
Trigger: CTGCGGGGCTTGCCCAGGTCAGCGAGTTTTCCTTTG...AAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR TCA 90 bp ATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTCCTGGTCTCAGATGTTaGTCCGGTAGGATTTCACCG +
Preference number: 4 (lower is better)
Translates to: MLSLVIQGTSYFILQREAPGLRC*SGRISP
Trigger: CGGTGAAATCCTACCGGATCAACATCTGAGACCAGG...AGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGAGTTTGATCACACGCTaGGCCACCTCCTCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQSLITR*ATSSCS
Trigger: GGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACT...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACCAGGCGCTGCCGGCTaGTCTCCTTCATGTTCACGA +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITPGAAG*SPSCSR
Trigger: TCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCACACACCTCGTGATTaGAGCTCTCCACAGCACCGG +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQHTPRD*SSPQHR
Trigger: CCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp ATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTGGGGTGTGGATTTGCCCTaGCGGACTTGGATGCATGGC +
Preference number: 4 (lower is better)
Translates to: IQGTSYFILQREANFVFWGVDLP*RTWMHG
Trigger: GCCATGCATCCAAGTCCGGCAGGGCAAATCCACACC...CCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTTCATTCAGCTCTTTCTaGAAAATTTCAAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSSFSSF*KISNVC
Trigger: GCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGA...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTTTGGTCAAAATATACTaGTTGTTCTGGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSLVKIY*LFWESI
Trigger: GATTGACTCCCAGAACAACCAGTATATTTTGACCAA...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACCAGGAAGTCGCGGATaGGTTCGATGGAGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITPGSRG*VRWRWR
Trigger: TCGCCACCTCCATCGAACCCATCCGCGACTTCCTGG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCGTACGCCACAAACGTaGGGAACACGTGGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQRTPQT*GTRGAL
Trigger: TAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp TCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTGATCCGGTAGGACTCAAGCATTCAGGTTaGAAGCTCACTTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: SGWKLTSISLVSDVDPVGLKHSG*KLTSIS
Trigger: GCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAG...TCCTACCGGATCAACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CCA 90 bp TCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGAGAATGGCTGGTTTTaGGGGGAGTGTGAAGGCCGT +
Preference number: 4 (lower is better)
Translates to: SLVIQGTSYFILQREANFENGWF*GECEGR
Trigger: ACGGCCTTCACACTCCCCCCAAAACCAGCCATTCTC...GAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GCAGCAGCAGTGTTATTTGAAGGACACCACAGTCATGGTGTGAGCTCTGCACTGACGTGGTTACAGGAATaGGCTGAACTGAAGGAATTA +
Preference number: 4 (lower is better)
Translates to: AAAVLFEGHHSHGVSSALTWLQE*AELKEL
Trigger: TAATTCCTTCAGTTCAGCCCATTCCTGTAACCACGT...CAGTGCAGAGCTCACACCATGACTGTGGTGTCCTTCAAATAACACTGCTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp CTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATATCATGAGAACAGCCTaGGGGACATCTGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: LSLVIQGTSYFILQREANIMRTA*GTSAPM
Trigger: CATGGGGGCAGATGTCCCCCAGGCTGTTCTCATGAT...ATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TTCTTTCCTTTGGAGAGAGACCTAGAAGAACTACCAGGTCAAGGCATATGTACAACTTGGGGCAAAGGGTaGTGGGTGGCGAGGGATAAA +
Preference number: 4 (lower is better)
Translates to: FFPLERDLEELPGQGICTTWGKG*WVARDK
Trigger: TTTATCCCTCGCCACCCACCACCCTTTGCCCCAAGT...TGTACATATGCCTTGACCTGGTAGTTCTTCTAGGTCTCTCTCCAAAGGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACTTCTGCACTGCTGGTaGGAGCGTAAACTAGCACAA +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKELLHCW*ERKLAQ
Trigger: TTGTGCTAGTTTACGCTCCCACCAGCAGTGCAGAAG...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAAATGTTGGCAGGGATGTaGGGAACAGGGAACACTTCT +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKEMLAGM*GTGNTS
Trigger: AGAAGTGTTCCCTGTTCCCCACATCCCTGCCAACAT...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp CTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATCTAGTCCTGTGGGGATaGGCACGTGGTTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSLVIQGTSYFILQREANLVLWG*ARGYRN
Trigger: ATTCCTGTAACCACGTGCTCATCCCCACAGGACTAG...ATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp TGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACCTACGAAGCTCTATGACATCTaGCCCTCTAACAGTTTCGCA +
Preference number: 4 (lower is better)
Translates to: CSGDRCTKISQITTKEPTKLYDI*PSNSFA
Trigger: TGCGAAACTGTTAGAGGGTCAGATGTCATAGAGCTT...CGTAGGTTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp ATCATGGCTACCCGGAACGCTTCTTTCCCATTTTTCCCCCATGTATTGGTGCTTAAGGGTGTACAGTTGTaGTTCTCACGAATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: IMATRNASFPFFPHVLVLKGVQL*FSRIWF
Trigger: GAACCAGATTCGTGAGAATCACAACTGTACACCCTT...AAGCACCAATACATGGGGGAAAAATGGGAAAGAAGCGTTCCGGGTAGCCATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCAATCCACGGGTCTCTaGCCCACTGAGCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQQSTGL*PTELAC
Trigger: ACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACCCAGAAGGAGCAGCTaGTGGCCATCTAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITPRRSS*WPSKRS
Trigger: TGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCTGGG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp TCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTAGCCTGGGGGACATCTaGCCCCATGATCCAATCACC +
Preference number: 4 (lower is better)
Translates to: SFRALLISSCRERLISCFSLGDI*PHDPIT
Trigger: GGTGATTGGATCATGGGGGCAGATGTCCCCCAGGCT...AAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR GCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAAGTGAAGCTCCTTAGCTaGAGTAACAGGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKEVKLLS*SNRLMR
Trigger: CCTCATCAACCTGTTACTGCAGCTAAGGAGCTTCAC...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TTCTTTCCTTTGGAGAGAGACCTAGAAGAACTACCAGGTCAAGGCATATGTACAGATCTGCACGTGGGATaGTTGAATCTCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FFPLERDLEELPGQGICTDLHVG*LNLWAW
Trigger: CCAAGCCCAGAGATTCAACCATCCCACGTGCAGATC...TGTACATATGCCTTGACCTGGTAGTTCTTCTAGGTCTCTCTCCAAAGGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACAATCCACGGGTCTCTaGCCCACTGAGCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITQSTGL*PTELAC
Trigger: ACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGCTCCACTGCTCCAATTaGAGTTTTCAGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQLHCSN*SFQFVQ
Trigger: CTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAG...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACACGTCTTTCTCCACTaGTCCAATTGCAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQHVFLH*SNCSFQ
Trigger: CTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTG...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTCCTAATGTCTCCACTTaGACAATAGACTTAATACTA +
Preference number: 4 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTPNVST*TIDLIL
Trigger: TAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGG...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAATTTCTTTGTTCCCCTTaGTTTCCATGTGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQFLCSP*FPCAAS
Trigger: GGAAGCTGCACATGGAAAGCAAGGGGAACAAAGAAA...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAAGAGGGCTGTTCTGTTaGCAAGGTGCGAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITRGLFC*QGASFP
Trigger: TGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCT...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp ACGAAAAAGAGACTTGCATGCACATGTCTAGAGCAGCACGATTTGCAGTTGCAATCCCCCATGTATTGGTaGTTCTTTTACATTGCCGCG +
Preference number: 4 (lower is better)
Translates to: TKKRLACTCLEQHDLQLQSPMYW*FFYIAA
Trigger: CGCGGCAATGTAAAAGAAGCACCAATACATGGGGGA...TTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCAAGTCTCTTTTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAAGAAGGAGCAGCTGCTaGCCATCTAAGCGCTCACTC +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITRRSSC*PSKRSL
Trigger: GAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCTTCT...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CCA 90 bp CAGCCTCAAGCATTCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTGCTAATTTCGTGTTTTaGGGGGAGTTTGATGTTACT +
Preference number: 4 (lower is better)
Translates to: QPQAFRLEAHFHKPGLRCANFVF*GEFDVT
Trigger: AGTAACATCAAACTCCCCCCAAAACACGAAATTAGC...ACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CCA 90 bp ATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTGAGGGTGAAGCTTTCTaGAAGGTCTGGATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: MLSLVIQGTSYFILQREAEGEAF*KVWMKE
Trigger: CTCTTTCATCCAGACCTTCCAGAAAGCTTCACCCTC...AGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp TCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTCTGTCCGAGTCGAGCTaGGTGTTGTTGGGTAATACA +
Preference number: 4 (lower is better)
Translates to: SSFRALLISSCRERLISCLSESS*VLLGNT
Trigger: TGTATTACCCAACAACACCCAGCTCGACTCGGACAG...ACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACTTGTTACTTTGCAGTaGCTACCTAACACTCCATGG +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKELVTLQ*LPNTPW
Trigger: CCATGGAGTGTTAGGTAGCCACTGCAAAGTAACAAG...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTGCAGTAACTCAGGAATGAACCAGAAGTCATCATaGCTACCCGGAACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SNLDGTGDHYSKCSNSGMNQKSS*LPGTLL
Trigger: AAGAAGCGTTCCGGGTAGCCATGATGACTTCTGGTT...CATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CAA 72 bp CTTGCATGCACATGTCTAGAGCAGCACGATTTGCAGTaGCAAAAATATGGAACCAGCCCAAATGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LACTCLEQHDLQ*QKYGTSPNAHQ
Trigger: TTGATGGGCATTTGGGCTGGTTCCATATTTTTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CAA 72 bp AAGAGACTTGCATGCACATGTCTAGAGCAGCACGATTaGCAGTTGCAAAAATATGGAACCAGCCCAAATGCC +
Preference number: 4 (lower is better)
Translates to: KRLACTCLEQHD*QLQKYGTSPNA
Trigger: GGCATTTGGGCTGGTTCCATATTTTTGCAACTGCAAATCGTGCTGCTCTAGACATGTGCATGCAAGTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp ATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTGGAGGATCTTACCTGAGTaGTCAGTTAGGCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: IQGTSYFILQREANFVFWRILPE*SVRQRP
Trigger: GGGTCTCTGCCTAACTGATCACTCAGGTAAGATCCT...CCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAATCTAGGGTAACACACTaGATATGCAAGCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKESRVTH*ICKLYD
Trigger: GTCATAGAGCTTGCATATTCAGTGTGTTACCCTAGA...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTGCAGTAACTCAGGAATGCATGAGAGAGCTGAATaGTTAGGCAAACCAGACACT +
Preference number: 4 (lower is better)
Translates to: SNLDGTGDHYSKCSNSGMHERAE*LGKPDT
Trigger: AGTGTCTGGTTTGCCTAATCATTCAGCTCTCTCATG...CATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCTCCACCCTCAGAACTaGCTCAAAATTGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQLHPQN*LKIDPL
Trigger: AAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGTTGATCCGCAAGAGATaGCCCCACAGCAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQLIRKR*PHSKPN
Trigger: ATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAA...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGACAATGCTAGAAGATaGACTGGCGCCCGCCTGTAT +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITDNARR*TGARLY
Trigger: ATACAGGCGGGCGCCAGTGCATCTTCTAGCATTGTC...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR GCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAAATGCTCTTGTTACTTTaGAGTGGCTACCTAACACTC +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKEMLLLL*SGYLTL
Trigger: GAGTGTTAGGTAGCCACTGCAAAGTAACAAGAGCAT...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGATATACTGGTTGTTCTaGGAGTCAATCAGCATGCTA +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQIYWLF*ESISML
Trigger: TAGCATGCTGATTGACTCCCAGAACAACCAGTATAT...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp TGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACCTACGATATACTGGTTGTTCTaGGAGTCAATCAGCATGCTA +
Preference number: 4 (lower is better)
Translates to: CSGDRCTKISQITTKEPTIYWLF*ESISML
Trigger: TAGCATGCTGATTGACTCCCAGAACAACCAGTATAT...CGTAGGTTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGGGATGGTTGAATCTCTaGGCTTGGTCAAAATATACT +
Preference number: 4 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQGWLNL*AWSKYT
Trigger: AGTATATTTTGACCAAGCCCAGAGATTCAACCATCC...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTGCAGTAACTCAGGAATGTACCTCTCCCCACCCTaGCTTTTAATCAGCTACTTT +
Preference number: 4 (lower is better)
Translates to: SNLDGTGDHYSKCSNSGMYLSPP*LLISYF
Trigger: AAAGTAGCTGATTAAAAGCCAGGGTGGGGAGAGGTA...CATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp TTCTTTCCTTTGGAGAGAGACCTAGAAGAACTACCAGGTCAAGGCATATGTACACAAAACCACATGATGTaGAGCTCCTTAGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: FFPLERDLEELPGQGICTQNHMM*SSLAAV
Trigger: TACTGCAGCTAAGGAGCTTCACATCATGTGGTTTTG...TGTACATATGCCTTGACCTGGTAGTTCTTCTAGGTCTCTCTCCAAAGGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp TATGCAAGCTCTATGACATCTGACCCTCTAACAGTTTCGCACCTTAGAGGGAGCTTTACAATGAGGAGGTaGAACCTTTTGTGGGTAAAT +
Preference number: 4 (lower is better)
Translates to: YASSMTSDPLTVSHLRGSFTMRR*NLLWVN
Trigger: ATTTACCCACAAAAGGTTTCACCTCCTCATTGTAAA...GCTCCCTCTAAGGTGCGAAACTGTTAGAGGGTCAGATGTCATAGAGCTTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGAAATGAAGACGCTCTaGGTGGGTTTGATCCGCAAG +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITEMKTL*VGLIRK
Trigger: CTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTC...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp TATGCAAGCTCTATGACATCTGACCCTCTAACAGTTTCGCACCTTAGAGGGAGCTACTTTCCTCTTTTGTaGGGTGTCTGGAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: YASSMTSDPLTVSHLRGSYFPLL*GVWKNK
Trigger: TTTGTTTTTCCAGACACCGCACAAAAGAGGAAAGTA...GCTCCCTCTAAGGTGCGAAACTGTTAGAGGGTCAGATGTCATAGAGCTTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp ACTTTTGCTAAGTCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTGGTATAGCACGATTTGCAGTTaGAAAAATATGGAACCAGCC +
Preference number: 4 (lower is better)
Translates to: TFAKSMLVFQLALQAKWYSTICS*KNMEPA
Trigger: GGCTGGTTCCATATTTTTGCAACTGCAAATCGTGCT...ATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGACTTAGCAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAAGGATGGTTGAATCTCTaGGCTTGGTCAAAATATACT +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQGWLNL*AWSKYT
Trigger: AGTATATTTTGACCAAGCCCAGAGATTCAACCATCC...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CCA 90 bp TGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACCTACGCTTTTGTGCGGTGTCTaGAAAAACAAAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: CSGDRCTKISQITTKEPTLLCGV*KNKVSF
Trigger: AAAAGACACTTTGTTTTTCCAGACACCGCACAAAAG...CGTAGGTTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTGCAGTAACTCAGGAATGGCACTGCAGGCAAAGTaGTATCTGATCTTAATTCAC +
Preference number: 4 (lower is better)
Translates to: SNLDGTGDHYSKCSNSGMALQAK*YLILIH
Trigger: GTGAATTAAGATCAGATACCACTTTGCCTGCAGTGC...CATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp ACTTTTGCTAAGTCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTGGTATGTATTTGTAGCAACCTaGATGGAACTGGAGACCATT +
Preference number: 4 (lower is better)
Translates to: TFAKSMLVFQLALQAKWYVFVAT*MELETI
Trigger: AATGGTCTCCAGTTCCATCCAGGTTGCTACAAATAC...ATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGACTTAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGTCAAACGTGTGCACCTaGAACAGTTTCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQSNVCT*NSFSSS
Trigger: GGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGA...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR TCA 90 bp CTGGCCAGAAATTTAACCCCAATCATTTTTATGGGTGTCTCTCCTGCTCTCAGAGTTACAGGAATGGGCTaGACTGAAGGAATTATAAAG +
Preference number: 4 (lower is better)
Translates to: LARNLTPIIFMGVSPALRVTGMG*TEGIIK
Trigger: CTTTATAATTCCTTCAGTTCAGCCCATTCCTGTAAC...TCTGAGAGCAGGAGAGACACCCATAAAAATGATTGGGGTTAAATTTCTGGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR TCA 90 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTGCAGTAACTCAGGAATGATTTTGCTCTGTTGCTaGTGCTCTTGTTACTTTGCA +
Preference number: 4 (lower is better)
Translates to: SNLDGTGDHYSKCSNSGMILLCC*CSCYFA
Trigger: TGCAAAGTAACAAGAGCATCAGCAACAGAGCAAAAT...CATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGATTCAGAACACCTTATaGGGATGCCTGTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMIQNTL*GCLSSG
Trigger: TCCTGAAGACAGGCATCCTCATAAGGTGTTCTGAAT...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACACTCCAGACGATCCGCTaGCTTTCTTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITLQTIR*LSYIFK
Trigger: CTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAG...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp ACTTTTGCTAAGTCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTGGTATTTCCAACCGATATTTTaGTCTGTTGCTGATGCTCTT +
Preference number: 4 (lower is better)
Translates to: TFAKSMLVFQLALQAKWYFQPIF*SVADAL
Trigger: AAGAGCATCAGCAACAGAGCAAAATATCGGTTGGAA...ATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGACTTAGCAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AATGCAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACGTGCTTCTTTTACATTaGCGCGGTCATGTTACATGC +
Preference number: 4 (lower is better)
Translates to: NANQNHNAIPYSSKNGRNVLLLH*RGHVTC
Trigger: GCATGTAACATGACCGCGGCAATGTAAAAGAAGCAC...GTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp AATGCAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACGCAGTTGCAAAAATATaGAACCAGCCCAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: NANQNHNAIPYSSKNGRNAVAKI*NQPKCP
Trigger: TGGGCATTTGGGCTGGTTCCATATTTTTGCAACTGC...GTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TTCTTTCCTTTGGAGAGAGACCTAGAAGAACTACCAGGTCAAGGCATATGTACACTAAGGAAAACAGTGTaGAGGTTGCTCAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: FFPLERDLEELPGQGICTLRKTV*RLLREL
Trigger: TAGTTCTCTGAGCAACCTCCACACTGTTTTCCTTAG...TGTACATATGCCTTGACCTGGTAGTTCTTCTAGGTCTCTCTCCAAAGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAAAACCCCATCCAAAAGTaGGCTAAGGATATAAATAGA +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKENPIQK*AKDINR
Trigger: TCTATTTATATCCTTAGCCCACTTTTGGATGGGGTT...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAATTGATGTTTTTCTGCTaGCAGAAGTTCCATATATTC +
Preference number: 4 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQLMFFC*QKFHIF
Trigger: GAATATATGGAACTTCTGGCAGCAGAAAAACATCAA...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp GTACACTGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAAAAATCAAAACCACAATaGAATACCTTACTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VHCSGDRCTKISQITTKEKSKPQ*NTLLLQ
Trigger: TTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTT...TTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCAGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp ACTTTTGCTAAGTCGATGCTAGTTTTCCAGCTAGCACTGCAGGCAAAGTGGTATTTGGTCAAAATATACTaGTTGTTCTGGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: TFAKSMLVFQLALQAKWYLVKIY*LFWESI
Trigger: GATTGACTCCCAGAACAACCAGTATATTTTGACCAA...ATACCACTTTGCCTGCAGTGCTAGCTGGAAAACTAGCATCGACTTAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp AGCAACCTGGATGGAACTGGAGACCATTATTCTAAGTGCAGTAACTCAGGAATGTTAGATGCTCAGGACTaGTTCCACTGTTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: SNLDGTGDHYSKCSNSGMLDAQD*FHCFLK
Trigger: TTTTAAGAAACAGTGGAACCAGTCCTGAGCATCTAA...CATTCCTGAGTTACTGCACTTAGAATAATGGTCTCCAGTTCCATCCAGGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp TGTACAAATCCAAAGAGCTGGAGAAAATCTCCACAATCTATACATCCGACAAAGTGGAACCAGCCCAAATaGCCATCAATAGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: CTNPKSWRKSPQSIHPTKWNQPK*PSIENV
Trigger: CACATTTTCTATTGATGGGCATTTGGGCTGGTTCCA...CTTTGTCGGATGTATAGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGGGATGGTTGAATCTCTaGGCTTGGTCAAAATATACT +
Preference number: 4 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMGWLNL*AWSKYT
Trigger: AGTATATTTTGACCAAGCCCAGAGATTCAACCATCC...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
3UTR CAA 72 bp AAACTAGCACAACCACTAAGGAAAACAGTGTGGAGGTaGCTCAGAGAACTAAAAGTAGCTCTACCATTTGAT +
Preference number: 4 (lower is better)
Translates to: KLAQPLRKTVWR*LRELKVALPFD
Trigger: ATCAAATGGTAGAGCTACTTTTAGTTCTCTGAGCAACCTCCACACTGTTTTCCTTAGTGGTTGTGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AATGCAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACGACCATTATTCTAAGTaGAGTAACTCAGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: NANQNHNAIPYSSKNGRNDHYSK*SNSGME
Trigger: TTCCATTCCTGAGTTACTGCACTTAGAATAATGGTC...GTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CCA 90 bp CAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACCAAAACAAATCCAAAGAGCTaGAGAAAATCTCCACAATCT +
Preference number: 4 (lower is better)
Translates to: QIKTTMQYLTPPRMAVTKTNPKS*RKSPQS
Trigger: AGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGT...TTTGGTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCCTAATGTCTCCACTTaGACAATAGACTTAATACTA +
Preference number: 4 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQPNVST*TIDLIL
Trigger: TAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR GCA 90 bp CAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACCAAACCTAATGTCTCCACTTaGACAATAGACTTAATACTA +
Preference number: 4 (lower is better)
Translates to: QIKTTMQYLTPPRMAVTKPNVST*TIDLIL
Trigger: TAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGG...TTTGGTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR TCA 90 bp GAGAGTATAAAGAAAAACATGCCAGTGAGATCAGAGTTGACTTCTGAAAGTAAACTGAAGTTAGCCATGTaGAGGCAAATTCCAATTCTT +
Preference number: 4 (lower is better)
Translates to: ESIKKNMPVRSELTSESKLKLAM*RQIPIL
Trigger: AAGAATTGGAATTTGCCTTCACATGGCTAACTTCAG...TTTACTTTCAGAAGTCAACTCTGATCTCACTGGCATGTTTTTCTTTATACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR GCA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAAACTTGATGTTTTTCTaGTGCCAGAAGTTCCATATA +
Preference number: 4 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITNLMFF*CQKFHI
Trigger: TATATGGAACTTCTGGCAGCAGAAAAACATCAAGTT...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
3UTR CAA 72 bp GAGAGTATAAAGAAAAACATGCCAGTGAGATCAGAGTaGACTTCTGAAAGTAAACACAAGCCTTTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ESIKKNMPVRSE*TSESKHKPLKE
Trigger: TTCTTTTAAAGGCTTGTGTTTACTTTCAGAAGTCAACTCTGATCTCACTGGCATGTTTTTCTTTATACTCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS TCA 90 bp CCCGTCCGGCCCGAGCATCACCGTTCCGCGGCCTGGGCCGGGCTCTaGGGCGCCAGGACCCGAGGGGCGGAGGGGGACGCTGTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PVRPEHHRSAAWAGL*GARTRGAEGDAVSR
Trigger: GCGGGAGACAGCGTCCCCCTCCGCCCCTCGGGTCCTGGCGCCTCAGAGCCCGGCCCAGGCCGCGGAACGGTGATGCTCGGGCCGGACGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS-3UTR CAA 90 bp CATGACGCCCAGAGGACCCGCCCCTCACTGAGAAGCCCCACCCTCGGCCGACCCCGGGGCCTGTCCGAGTaGAGCTGGGTGCTGTCCGAG +
Preference number: 5 (lower is better)
Translates to: HDAQRTRPSLRSPTLGRPRGLSE*SWVLSE
Trigger: CTCGGACAGCACCCAGCTCAACTCGGACAGGCCCCG...GGGTCGGCCGAGGGTGGGGCTTCTCAGTGAGGGGCGGGTCCTCTGGGCGTCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS GCA 90 bp CGGACCCACTGCCGGCTCTGCATGGCAGCCACCCCTCGCCCGCGGTaGAGTTTGATCACACGCTGCGCCACCTCCTCGTGCTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: RTHCRLCMAATPRPR*SLITRCATSSCSTA
Trigger: GGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS-3UTR CAA 90 bp GGCTCCAGGCCACGGCCATGTCCTTGCGGTGCACTGCAGGGCACCAAGGGTGGGGAGCTTCCAGGTGACTaGCTGGAGGGGGAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GSRPRPCPCGALQGTKGGELPGD*LEGEEP
Trigger: GGGCTCCTCCCCCTCCAGCAAGTCACCTGGAAGCTC...CCCACCCTTGGTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGCCTGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS TCA 90 bp CCAGGAAGTCGCGGATGGGTTCGATGGAGGTGGCGATCTCCTCGGTaGCCACGGGGCCCTGAGAGGAGACGAGCGCTCCAGCCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: PGSRGWVRWRWRSPR*PRGPERRRALQPGN
Trigger: GTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGGAGATCGCCACCTCCATCGAACCCATCCGCGACTTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCGCCGGAGGGCTTCCTaGCATCCCTTCCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPARRRAS*HPFPGG
Trigger: CCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS TCA 90 bp ATGGGTTCGATGGAGGTGGCGATCTCCTCGGTGACCACGGGGCCCTaGGAGGAGACGAGCGCTCCAGCCAGGAAACAGCCCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: MGSMEVAISSVTTGP*EETSAPARKQPSSM
Trigger: CATGGAGCTGGGCTGTTTCCTGGCTGGAGCGCTCGTCTCCTCTCAGGGCCCCGTGGTCACCGAGGAGATCGCCACCTCCATCGAACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434316.7
ENST00000465556.1
CDS GCA 90 bp CCCCTCGATGTGCACTGCAAGCGTTGGGAGGTGAGGCCTCGTGATTaGAGCTCTCCACAGCACCGGGGCGAGCAAGAGGCTGAGCGTGGT +
Preference number: 5 (lower is better)
Translates to: PLDVHCKRWEVRPRD*SSPQHRGEQEAERG
Trigger: ACCACGCTCAGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CAA 90 bp AGGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCACGCCCGCGGTGCAGTTaGATCACACGCTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: RSSCWPSKRSLPTDASLPRPRCS*ITRCAT
Trigger: GGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCG...TGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCGCCCGCGGTGCAGTTaGATCACACGCTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPARPRCS*ITRCAT
Trigger: GGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp CATGGGCAGACGGGAGGCAGCTTTTGGGCAGCGGGGAAAGGACACAGAAGCAGAGCCACGGCCATGTCCTaGCGGTGCACTGCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: HGQTGGSFWAAGKGHRSRATAMS*RCTAGH
Trigger: GTGCCCTGCAGTGCACCGCAAGGACATGGCCGTGGC...TCTGCTTCTGTGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTCTGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS CCA 90 bp CGTGAGCTCGTACGCCACAAACGTGGGGAACACGTGGAGCCCTGTTaGGAACAGGACAGACACGTTACGACCGCAGGACAGCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: RELVRHKRGEHVEPC*EQDRHVTTAGQPPP
Trigger: TGGGGGAGGCTGTCCTGCGGTCGTAACGTGTCTGTCCTGTTCCCAACAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACGAGCTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS TCA 90 bp AGGTCCGGAGGGCAGGGCACAGCAATCCACGGGTCTCTGCCCCACTaGGCTTGCATGTCAGACACACATTTTCAGCGGGACGCAGGGATC +
Preference number: 5 (lower is better)
Translates to: RSGGQGTAIHGSLPH*ACMSDTHFQRDAGI
Trigger: GATCCCTGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCCTGCCCTCCGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS GCA 90 bp TGCAGTTTGATCACACGCTGCGCCACCTCCTCGTGCTCCACAGCCTaGACCGCCCAGGGAAGGACGGGAAACAGCACCCAGAAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: CSLITRCATSSCSTA*TAQGRTGNSTQKKL
Trigger: AAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCACGCTCTGCGTGGGTTaGATCCGCAAGAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHATLCVG*IRKRCP
Trigger: GGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCTCAATGTCGCCTTCTTaGTCACCCCGAGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: EGCSVAKVRASQKEQLLASMSPS*SPRALP
Trigger: GGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGA...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS TCA 90 bp TCAAATGCTTCTGTCCCCTCGATGTGCACTGCAAGCGTTGGGAGGTaGGGCCTCGTGATTGCAGCTCTCCACAGCACCGGGGCGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SNASVPSMCTASVGR*GLVIAALHSTGASK
Trigger: CTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS GCA 90 bp CATGATCCAGGTCCGGAGGGCAGGGCACAGCAATCCACGGGTCTCTaGCCCACTGAGCTTGCATGTCAGACACACATTTTCAGCGGGACG +
Preference number: 5 (lower is better)
Translates to: HDPGPEGRAQQSTGL*PTELACQTHIFSGT
Trigger: CGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCCTGCCCTCCGGACCTGGATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS CCA 90 bp AACACCAGCACCGTGAGCTCGTACGCCACAAACGTGGGGAACACGTaGAGCCCTGTTGGGAACAGGACAGACACGTTACGACCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: NTSTVSSYATNVGNT*SPVGNRTDTLRPQD
Trigger: GTCCTGCGGTCGTAACGTGTCTGTCCTGTTCCCAACAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACGAGCTCACGGTGCTGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS CCA 90 bp CTACGGTTCAAATGCTTCTGTCCCCTCGATGTGCACTGCAAGCGTTaGGAGGTGAGGCCTCGTGATTGCAGCTCTCCACAGCACCGGGGC +
Preference number: 5 (lower is better)
Translates to: LRFKCFCPLDVHCKR*EVRPRDCSSPQHRG
Trigger: GCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCACACGAGGGGTGTGCTaGACAAGGACAGACACGTGG +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHATRGVC*TRTDTW
Trigger: CCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTCAATGTCGCCTTCTTaGTCACCCCGAGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHASMSPS*SPRALP
Trigger: GGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp GAAGGCACCCAGGATGAAAGGACTCAGGTGGGGTGGGCTTCGCACGGACCCCTACCCTGCTGCCAGCTGTaGTTCAGGTTGTTATCGAGG +
Preference number: 5 (lower is better)
Translates to: EGTQDERTQVGWASHGPLPCCQL*FRLLSR
Trigger: CCTCGATAACAACCTGAACAACAGCTGGCAGCAGGG...TAGGGGTCCGTGCGAAGCCCACCCCACCTGAGTCCTTTCATCCTGGGTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp GTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCGACGGGAGGCAGCTTTaGGGCAGCGGGGAAAGGACA +
Preference number: 5 (lower is better)
Translates to: VVIEAANTPSASSIQVGSDGRQL*GSGERT
Trigger: TGTCCTTTCCCCGCTGCCCAAAAGCTGCCTCCCGTC...GCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp ATGTGTGGCTGCAACCCCGGAGTCCTGGACGGAGGTGAAGGCACCCAGGATGAAGAGGGCGCTGAGAGATaGAGCAAAAGGCAGACAGGG +
Preference number: 5 (lower is better)
Translates to: MCGCNPGVLDGGEGTQDEEGAER*SKRQTG
Trigger: CCCTGTCTGCCTTTTGCTCAATCTCTCAGCGCCCTC...TTCATCCTGGGTGCCTTCACCTCCGTCCAGGACTCCGGGGTTGCAGCCACACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS TCA 90 bp GGACGGGAAACAGCACCCAGAAGAAGCTTCTTCCCAACACCTTCATaGTCCAGGTCCGGAGGGCAGGGCACAGCAATCCACGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GRETAPRRSFFPTPS*SRSGGQGTAIHGSL
Trigger: CAGAGACCCGTGGATTGCTGTGCCCTGCCCTCCGGACCTGGATCATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCTGCACGTGGGATGGTaGAATCTCTGGGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPALHVGW*NLWAWS
Trigger: TGACCAAGCCCAGAGATTCAACCATCCCACGTGCAG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS TCA 90 bp ACCCCGAGCACTGCCCATGAGGAACCTGGACACGAGGGGTGTGCTTaGCAAGGACAGACACGTGGAAATGAAGACGCTCTGCGTGGGTTT +
Preference number: 5 (lower is better)
Translates to: TPSTAHEEPGHEGCA*QGQTRGNEDALRGF
Trigger: AAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS TCA 90 bp AGAGGGCTGTTCTGTTGCCTTCTTTGTCACCCCGAGCACTGCCCATaGGGAACCTGGACACGAGGGGTGTGCTTGACAAGGACAGACACG +
Preference number: 5 (lower is better)
Translates to: RGLFCCLLCHPEHCP*GTWTRGVCLTRTDT
Trigger: CGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCAACAGAACAGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375391.5
CDS-3UTR CAA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACGCTCTGCGTGGGTTaGATCCGCAAGAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSTLCVG*IRKRCP
Trigger: GGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGT...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGGCAGAGACGATCCACTaGATGTACTGGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLAETIH*MYWLLL
Trigger: GAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGC...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp TCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCAGAGACGATCCACTaGATGTACTGGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLLPAVVQVVIEAANTPSAETIH*MYWLLL
Trigger: GAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGC...TGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS TCA 90 bp TGCTGTAGTCAATGTCGCCTTCTTTGTCACCCCGAGCACTGCCCATaGGGAACCTGGACACGAGGGGTGTGCTTGACAAGGACAGACACG +
Preference number: 5 (lower is better)
Translates to: CCSQCRLLCHPEHCP*GTWTRGVCLTRTDT
Trigger: CGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTGACTACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS GCA 90 bp GAATGCCTGCTACGGTTCAAATGCTTCTGTCCCCTCGATGTGCACTaGAAGCGTTGGGAGGTGAGGCCTCGTGATTGCAGCTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: ECLLRFKCFCPLDVH*KRWEVRPRDCSSPQ
Trigger: CTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAGCAGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS GCA 90 bp GGTTTCCTGCTACGGTTCAAATGCTTCTGTCCCCTCGATGTGCACTaGAAGCGTTGGGAGGTGAGGCCTCGTGATTGCAGCTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: GFLLRFKCFCPLDVH*KRWEVRPRDCSSPQ
Trigger: CTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAGCAGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619336.1
CDS-3UTR CAA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACGCCGGAGGGCTTCCTaGCATCCCTTCCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQRRRAS*HPFPGG
Trigger: CCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCG...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAACACGAGGGGTGTGCTaGACAAGGACAGACACGTGG +
Preference number: 5 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTATRGVC*TRTDTW
Trigger: CCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGT...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCACAGCTGTTGTTCAGGTaGTTATCGAGGCCGCCAACA +
Preference number: 5 (lower is better)
Translates to: SLLPAVVQVVIEAANTPSQLLFR*LSRPPT
Trigger: TGTTGGCGGCCTCGATAACAACCTGAACAACAGCTG...TGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CAA 90 bp GTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCCCCTGCTGCCAGCTGTaGTTCAGGTTGTTATCGAGG +
Preference number: 5 (lower is better)
Translates to: VVIEAANTPSASSIQVGSPCCQL*FRLLSR
Trigger: CCTCGATAACAACCTGAACAACAGCTGGCAGCAGGG...GCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS TCA 90 bp AGTTTTCAGTTTGTTCAGAACTGCATTCTTCTGGCGGAGAAGCCCTaGGAGCTTCCTGCAGCTGTCCCGGACCCACTGCCGGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SFQFVQNCILLAEKP*ELPAAVPDPLPALH
Trigger: ATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS-3UTR CAA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACGCCCGCGGTGCAGTTaGATCACACGCTGCGCCACC +
Preference number: 5 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQRPRCS*ITRCAT
Trigger: GGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCG...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACTGCACGTGGGATGGTaGAATCTCTGGGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTALHVGW*NLWAWS
Trigger: TGACCAAGCCCAGAGATTCAACCATCCCACGTGCAG...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp GAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTGGCCATTTCTTTGTTCCCCTaGCTTTCCATGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EGCSVAKVRASQKEQLLAISLFP*LSMCSF
Trigger: GAAGCTGCACATGGAAAGCAAGGGGAACAAAGAAAT...GGCCAGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp CTGGTTAGCCTCCAGCAAACATGTCCCCACAAGACTCACCATGAGTCCGTCCTCGCAGAGACGATCCACTaGATGTACTGGCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LVSLQQTCPHKTHHESVLAETIH*MYWLLL
Trigger: GAGGAGCAGCCAGTACATCAAGTGGATCGTCTCTGC...GAGGACGGACTCATGGTGAGTCTTGTGGGGACATGTTTGCTGGAGGCTAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGAGTCGAGCTGGGTGTaGTTGGGTAATACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: CQLLFRLLSRPPTPPQPQESSWV*LGNTAL
Trigger: CAGAGCTGTATTACCCAACAACACCCAGCTCGACTC...TTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp GCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTGGGACTCAGGCATGTTaGTCTGTTCTCACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: AVVQVVIEAANTPSASSIGTQAC*SVLTPS
Trigger: GGAAGGCGTGAGAACAGACAAACATGCCTGAGTCCC...AATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS GCA 90 bp AGGGGTGTGCTTGACAAGGACAGACACGTGGAAATGAAGACGCTCTaGGTGGGTTTGATCCGCAAGAGATGCCCCCACAGCAAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: RGVLDKDRHVEMKTL*VGLIRKRCPHSKPN
Trigger: ATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS GCA 90 bp GTTGCAGAGACTCCACTGTATCCTGAATGCCTGCTACGGTTCAAATaGTTCTGTCCCCTCGATGTGCACTGCAAGCGTTGGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VAETPLYPECLLRFK*FCPLDVHCKRWEVR
Trigger: CCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAGCAGGCATTCAGGATACAGTGGAGTCTCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCAGTCCGTAGACAGCTaGGAAAACGGAATTTTCACT +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAQSVDS*ENGIFT
Trigger: AGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTATTTCTTTGTTCCCCTaGCTTTCCATGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAISLFP*LSMCSF
Trigger: GAAGCTGCACATGGAAAGCAAGGGGAACAAAGAAAT...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp ATGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTGGCCCAGCTGGGGCTTaGAGGACACCGTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: MLSLVIQGTSYFILQREAGPAGA*RTPFLG
Trigger: GCCCAGGAACGGTGTCCTCAAAGCCCCAGCTGGGCC...AGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TCCCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCACCTCAAGCATTCAGGTaGGAAGCTCACTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: SLLPAVVQVVIEAANTPSPQAFR*EAHFHK
Trigger: CTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGG...TGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CAA 90 bp GAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGCGCCGGAGGGCTTCCTaGCATCCCTTCCCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: ESKVSFQAHGQDYNFILQRRRAS*HPFPGG
Trigger: CCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCG...CTGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTTTAAGGGCTTCAACTaGATGTTTTTCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAFKGFN*MFFCCQ
Trigger: CTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTCCCTTGACTGATTTATaGTCGTCAAAAGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAPLTDL*SSKACS
Trigger: GGAACATGCTTTTGACGACAATAAATCAGTCAAGGG...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp GGAGCAGCTGCTGGCCATCTAAGCGCTCACTCCCCACAGACGCTTCCCTTCCACTCAAAATTGACCCCCTaGACTGATTTATTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: GAAAGHLSAHSPQTLPFHSKLTP*TDLLSS
Trigger: TGACGACAATAAATCAGTCAAGGGGGTCAATTTTGA...GTGGAAGGGAAGCGTCTGTGGGGAGTGAGCGCTTAGATGGCCAGCAGCTGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCAGAACTGCCTCAAAATaGACCCCCTTGACTGATTTA +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHARTASK*TPLTDL
Trigger: TAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp CAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCCCAGCTGTTGAATCTCTGGGCTaGGTCAAAATATACTGGTTG +
Preference number: 5 (lower is better)
Translates to: QLSLSSSWSIHERDHAPAVESLG*VKIYWL
Trigger: CAACCAGTATATTTTGACCAAGCCCAGAGATTCAAC...AGCTGGGGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCAAGATCAGGATTTCTTaGTTCCCCTTGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAKIRIS*FPLLSM
Trigger: CATGGAAAGCAAGGGGAACAAAGAAATCCTGATCTT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp GGGTGTTGTTGGGTAATACAGCTCTGCATGGGCAGACGGGAGGCAGCTTTTGGGCCTCAAGCATTCAGGTaGGAAGCTCACTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: GCCWVIQLCMGRREAAFGPQAFR*EAHFHK
Trigger: CTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGG...CCCAAAAGCTGCCTCCCGTCTGCCCATGCAGAGCTGTATTACCCAACAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp GTTGTTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCCAGCAGCAGTGTTATTaGAAGGACACCACAGTCATG +
Preference number: 5 (lower is better)
Translates to: VVIEAANTPSASSIQVGSQQQCY*KDTTVM
Trigger: CATGACTGTGGTGTCCTTCAAATAACACTGCTGCTG...GCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp GCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCTTTTAAGGGCTTCAACTaGATGTTTTTCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: ARGLFCCQGASFPEGAAAFKGFN*MFFCCQ
Trigger: CTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAA...AGCAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp CTGCTAGAGGGCTGTTCTGTTGCCAAGGTGCGAGCTTCCCAGAAGGAGCAGCTGCCCTTGACTGATTTATaGTCGTCAAAAGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: LLEGCSVAKVRASQKEQLPLTDL*SSKACS
Trigger: GGAACATGCTTTTGACGACAATAAATCAGTCAAGGG...CAGCTGCTCCTTCTGGGAAGCTCGCACCTTGGCAACAGAACAGCCCTCTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCTCAAAATTGACCCCCTaGACTGATTTATTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHASKLTP*TDLLSS
Trigger: TGACGACAATAAATCAGTCAAGGGGGTCAATTTTGA...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp TTTGTTCTTGCAAATGTAGGGGGAGCATTCCGGCCCAGGGGAAGCTCAGTGAGTTCGAGCTGGGTGTTGTaGGGTAATACAGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: FVLANVGGAFRPRGSSVSSSWVL*GNTALH
Trigger: ATGCAGAGCTGTATTACCCAACAACACCCAGCTCGA...ACTCACTGAGCTTCCCCTGGGCCGGAATGCTCCCCCTACATTTGCAAGAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TCCTCCCAGCTCAGTCTCTCCAGCAGCTGGTCTATACATGAGCGCGACCACGCCATTGCAGTTTTCAGTTaGTTCAGAACTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: SSQLSLSSSWSIHERDHAIAVFS*FRTAFF
Trigger: GAAGAATGCAGTTCTGAACAAACTGAAAACTGCAAT...GGCGTGGTCGCGCTCATGTATAGACCAGCTGCTGGAGAGACTGAGCTGGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474393.5
CDS-3UTR CAA 90 bp GCACATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTCAGTCCGTAGACAGCTaGGAAAACGGAATTTTCACT +
Preference number: 5 (lower is better)
Translates to: AHPGTTFKVIGKTQCPGSQSVDS*ENGIFT
Trigger: AGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTG...AGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACCTACGCTGCACGTGGGATGGTaGAATCTCTGGGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CSGDRCTKISQITTKEPTLHVGW*NLWAWS
Trigger: TGACCAAGCCCAGAGATTCAACCATCCCACGTGCAG...CGTAGGTTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CAA 90 bp CCTGCTGCCAGCTGTTGTTCAGGTTGTTATCGAGGCCGCCAACACCCCCTCAGCACTTCTTATTTCATCTaGCAGAGAGAGGCTAATTTC +
Preference number: 5 (lower is better)
Translates to: PAASCCSGCYRGRQHPLSTSYFI*QREANF
Trigger: GAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGT...GCTGAGGGGGTGTTGGCGGCCTCGATAACAACCTGAACAACAGCTGGCAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CAA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTCAGTCCGTAGACAGCTaGGAAAACGGAATTTTCACT +
Preference number: 5 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTQSVDS*ENGIFT
Trigger: AGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTG...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAAGAACTGCCTCAAAATaGACCCCCTTGACTGATTTA +
Preference number: 5 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTARTASK*TPLTDL
Trigger: TAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCT...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCAGTTGAATCTCTGGGCTaGGTCAAAATATACTGGTTG +
Preference number: 5 (lower is better)
Translates to: PGTTFKVIGKTQCPGSTAVESLG*VKIYWL
Trigger: CAACCAGTATATTTTGACCAAGCCCAGAGATTCAAC...TGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TTATCGAGGCCGCCAACACCCCCTCAGCCTCAAGCATTCAGGTTGGAAGCTCACAACACTCCATCTCTTTaGCTACTTAAACCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSRPPTPPQPQAFRLEAHNTPSL*LLKPKP
Trigger: TGGCTTTGGTTTAAGTAGCAAAAGAGATGGAGTGTT...GTGAGCTTCCAACCTGAATGCTTGAGGCTGAGGGGGTGTTGGCGGCCTCGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGCTGGACTCTGCGGACTaGGGGCAAAGGGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMLDSAD*GQRVVG
Trigger: ACCCACCACCCTTTGCCCCAAGTCCGCAGAGTCCAG...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS TCA 90 bp ATAGGACAAGAATATTCTGTAAAAGCCGGGATAACACGACTGCACTaGCGCTCTGCTAGAGGGCTGTTCTGTTGCCTTCTTTGTCACCCC +
Preference number: 5 (lower is better)
Translates to: IGQEYSVKAGITRLH*RSARGLFCCLLCHP
Trigger: GGGGTGACAAAGAAGGCAACAGAACAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTATCCCGGCTTTTACAGAATATTCTTGTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375391.5
CDS-3UTR CAA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGTCTGCCCCACTGAGCTaGCATGTCAGACACACATTT +
Preference number: 5 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQSAPLS*HVRHTF
Trigger: AAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGA...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CATCCAGGCACCACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGTTGAATCTCTGGGCTaGGTCAAAATATACTGGTTG +
Preference number: 5 (lower is better)
Translates to: HPGTTFKVIGKTQCPGSTVESLG*VKIYWL
Trigger: CAACCAGTATATTTTGACCAAGCCCAGAGATTCAAC...AGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGTGGTGCCTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS GCA 90 bp TTTCTCTTCATCCGACAGGCCCACGTCTTTCTCCACTGCTCCAATTaGAGTTTTCAGTTTGTTCAGAACTGCATTCTTCTGGCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FLFIRQAHVFLHCSN*SFQFVQNCILLAEK
Trigger: CTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS CCA 90 bp TCTGCACGTGGGATGGTTGAATCTCTGGGCTTGGTCAAAATATACTaGTTGTTCTGGGAGTCAATCAGCATGCTAAGACCCAAGTCATCC +
Preference number: 5 (lower is better)
Translates to: SARGMVESLGLVKIY*LFWESISMLRPKSS
Trigger: GGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS-3UTR CAA 90 bp ACATTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAATCTGCCCCACTGAGCTaGCATGTCAGACACACATTT +
Preference number: 5 (lower is better)
Translates to: TFKVIGKTQCPGSTAHNQSAPLS*HVRHTF
Trigger: AAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGA...TTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAACGCTCTGCGTGGGTTaGATCCGCAAGAGATGCCCC +
Preference number: 5 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITTLCVG*IRKRCP
Trigger: GGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGT...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp ATCATGGCTACCCGGAACGCTTCTTTCCCATTTTTCCCCCATGTATTGGTGCTTAGCTGCAGTAACAGGTaGATGAGGTCCTTACCTTTC +
Preference number: 5 (lower is better)
Translates to: IMATRNASFPFFPHVLVLSCSNR*MRSLPF
Trigger: GAAAGGTAAGGACCTCATCAACCTGTTACTGCAGCT...AAGCACCAATACATGGGGGAAAAATGGGAAAGAAGCGTTCCGGGTAGCCATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS GCA 90 bp GCCTCCCCCAGCGCACACTATTTCTCACAACTTCAGTGTGTCACTTaGTTCAATACAGGAATTAAAATCCTAAATCCTCCCAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: ASPSAHYFSQLQCVT*FNTGIKILNPPKCT
Trigger: CGTGCACTTGGGAGGATTTAGGATTTTAATTCCTGTATTGAAGCAAGTGACACACTGAAGTTGTGAGAAATAGTGTGCGCTGGGGGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS CCA 90 bp GGGATGGTTGAATCTCTGGGCTTGGTCAAAATATACTGGTTGTTCTaGGAGTCAATCAGCATGCTAAGACCCAAGTCATCCTCCACTTCT +
Preference number: 5 (lower is better)
Translates to: GMVESLGLVKIYWLF*ESISMLRPKSSSTS
Trigger: AGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS-3UTR CAA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAACACGAGGGGTGTGCTaGACAAGGACAGACACGTGG +
Preference number: 5 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITTRGVC*TRTDTW
Trigger: CCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGT...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAGTTCTGTTGCCTTCTTaGTCACCCCGAGCACTGCCC +
Preference number: 5 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITVLLPS*SPRALP
Trigger: GGGCAGTGCTCGGGGTGACAAAGAAGGCAACAGAAC...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375391.5
CDS-3UTR CAA 90 bp TCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGAAATAAAACTGGCCTaGCAGACACAGAGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: SLVIQGTSYFILQREANFEIKLA*QTQRPR
Trigger: GCGAGGCCTCTGTGTCTGCAAGGCCAGTTTTATTTC...GAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTATCCTTCTGGAAGGGATaGGAAAATGAGACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CFLSSFRALLISSCRERLSFWKG*ENETSL
Trigger: GAGGCTGGTCTCATTTTCCAATCCCTTCCAGAAGGA...TAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TGCTCTGGTGACAGGTGCACCAAAATCTCACAGATCACCACTAAAGAACCTACGAGCTACTTTCCTCTTTaGTGCGGTGTCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: CSGDRCTKISQITTKEPTSYFPL*CGVWKN
Trigger: GTTTTTCCAGACACCGCACAAAAGAGGAAAGTAGCT...CGTAGGTTCTTTAGTGGTGATCTGTGAGATTTTGGTGCACCTGTCACCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CAA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGTTTAAGGGCTTCAACTaGATGTTTTTCTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQFKGFN*MFFCCQ
Trigger: CTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAA...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGCCCTTGACTGATTTATaGTCGTCAAAAGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQPLTDL*SSKACS
Trigger: GGAACATGCTTTTGACGACAATAAATCAGTCAAGGG...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGAGAACTGCCTCAAAATaGACCCCCTTGACTGATTTA +
Preference number: 5 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQRTASK*TPLTDL
Trigger: TAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCT...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGAAGATCAGGATTTCTTaGTTCCCCTTGCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQKIRIS*FPLLSM
Trigger: CATGGAAAGCAAGGGGAACAAAGAAATCCTGATCTT...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS-3UTR CAA 90 bp ATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTGGCAGCTGTTGTTCAGGTaGTTATCGAGGCCGCCAACA +
Preference number: 5 (lower is better)
Translates to: IQGTSYFILQREANFVFWQLLFR*LSRPPT
Trigger: TGTTGGCGGCCTCGATAACAACCTGAACAACAGCTG...CCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS TCA 90 bp GGTAACAATGTCCTTTATAAAGTGGTGATCTGCACGTGGGATGGTTaGATCTCTGGGCTTGGTCAAAATATACTGGTTGTTCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: GNNVLYKVVICTWDG*ISGLGQNILVVLGV
Trigger: GACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAAAGGACATTGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS CCA 90 bp GGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATTTCGTGTTTTaGGGGGAGTTTGATGTTACTCTCATCAAGTCGGTTTCCTGCTAC +
Preference number: 5 (lower is better)
Translates to: GTSYFILQREANFVF*GEFDVTLIKSVSCY
Trigger: GTAGCAGGAAACCGACTTGATGAGAGTAACATCAAACTCCCCCCAAAACACGAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619336.1
CDS-3UTR CAA 90 bp TTCAAGGTGATCGGTAAAACGCAGTGTCCCGGGTCTACTGCACATAATCAACAGTCAAAATTGACCCCCTaGACTGATTTATTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: FKVIGKTQCPGSTAHNQQSKLTP*TDLLSS
Trigger: TGACGACAATAAATCAGTCAAGGGGGTCAATTTTGA...CTGTTGATTATGTGCAGTAGACCCGGGACACTGCGTTTTACCGATCACCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS-3UTR CAA 90 bp CTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAATACAGGTTTAATTGACTaGCAGTTCTCCATGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSLVIQGTSYFILQREANTGLID*QFSMAG
Trigger: CCCAGCCATGGAGAACTGCAAGTCAATTAAACCTGT...ATTAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp ATCATGGCTACCCGGAACGCTTCTTTCCCATTTTTCCCCCATGTATTGGTGCTTAAAACAGTGTGGAGGTaGCTCAGAGAACTAAAAGTA +
Preference number: 5 (lower is better)
Translates to: IMATRNASFPFFPHVLVLKTVWR*LRELKV
Trigger: TACTTTTAGTTCTCTGAGCAACCTCCACACTGTTTT...AAGCACCAATACATGGGGGAAAAATGGGAAAGAAGCGTTCCGGGTAGCCATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CAA 90 bp AGCCTCAAGCATTCAGGTTGGAAGCTCACTTCCATAAGCCTGGTCTCAGATGTTACTTCTTATTTCATCTaGCAGAGAGAGGCTAATTTC +
Preference number: 5 (lower is better)
Translates to: SLKHSGWKLTSISLVSDVTSYFI*QREANF
Trigger: GAAATTAGCCTCTCTCTGCAAGATGAAATAAGAAGT...AACATCTGAGACCAGGCTTATGGAAGTGAGCTTCCAACCTGAATGCTTGAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS-3UTR CAA 90 bp AATGCAAATCAAAACCACAATGCAATACCTTACTCCTCCAAGAATGGCCGTAACGGTGCTTCTTTTACATaGCCGCGGTCATGTTACATG +
Preference number: 5 (lower is better)
Translates to: NANQNHNAIPYSSKNGRNGASFT*PRSCYM
Trigger: CATGTAACATGACCGCGGCAATGTAAAAGAAGCACC...GTTACGGCCATTCTTGGAGGAGTAAGGTATTGCATTGTGGTTTTGATTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS TCA 90 bp ACAATTTCAACAACATGTCTTCTGATTAGTGAGTGGCTCAGGAGGTaGAGAAGCAGCTGTTCTGGAACGCTTACTGATTTATTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: TISTTCLLISEWLRR*RSSCSGTLTDLLSS
Trigger: TGACGACAATAAATCAGTAAGCGTTCCAGAACAGCTGCTTCTTCACCTCCTGAGCCACTCACTAATCAGAAGACATGTTGTTGAAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473287.1
CDS-3UTR CAA 90 bp TGCTTTCTCTCGTCATTCAGGGCACTTCTTATTTCATCTTGCAGAGAGAGGCTAGCTTGGCTTTCAAATTaGTTCACGATGCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: CFLSSFRALLISSCRERLAWLSN*FTMLSD
Trigger: ATCAGAAAGCATCGTGAACAAATTTGAAAGCCAAGC...TAGCCTCTCTCTGCAAGATGAAATAAGAAGTGCCCTGAATGACGAGAGAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS-3UTR CAA 90 bp TGCAAAGTACCTGGAGAACACCCTAAAGTTAATTCAGAACACCTTATGAGGATGGATGCTCTTGTTACTTaGCAGTGGCTACCTAACACT +
Preference number: 5 (lower is better)
Translates to: CKVPGEHPKVNSEHLMRMDALVT*QWLPNT
Trigger: AGTGTTAGGTAGCCACTGCAAAGTAACAAGAGCATC...CATCCTCATAAGGTGTTCTGAATTAACTTTAGGGTGTTCTCCAGGTACTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CAA 90 bp TGTACAAATCCAAAGAGCTGGAGAAAATCTCCACAATCTATACATCCGACAAAGCAGCACGATTTGCAGTaGCAAAAATATGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: CTNPKSWRKSPQSIHPTKQHDLQ*QKYGTS
Trigger: GCTGGTTCCATATTTTTGCAACTGCAAATCGTGCTG...CTTTGTCGGATGTATAGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CAA 90 bp TGTACAAATCCAAAGAGCTGGAGAAAATCTCCACAATCTATACATCCGACAAAGGTTGAATCTCTGGGCTaGGTCAAAATATACTGGTTG +
Preference number: 5 (lower is better)
Translates to: CTNPKSWRKSPQSIHPTKVESLG*VKIYWL
Trigger: CAACCAGTATATTTTGACCAAGCCCAGAGATTCAAC...CTTTGTCGGATGTATAGATTGTGGAGATTTTCTCCAGCTCTTTGGATTTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622371.1
CDS-3UTR CAA 90 bp AGAATCAAAAGTAAGCTTCCAAGCTCACGGCCAGGATTACAACTTCATATTACAATTGCAGTTTTCAGTTaGTTCAGAACTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: RIKSKLPSSRPGLQLHITIAVFS*FRTAFF
Trigger: GAAGAATGCAGTTCTGAACAAACTGAAAACTGCAAT...TGTAATATGAAGTTGTAATCCTGGCCGTGAGCTTGGAAGCTTACTTTTGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375391.5
ENST00000434316.7
CDS GCA 90 bp TTGATGTTGCATATTTTTAAGGGCTTCAACTTGATGTTTTTCTGCTaGCAGAAGTTCCATATATTCTGTTTCTTCCTTTATTGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LMLHIFKGFNLMFFC*QKFHIFCFFLYCSL
Trigger: GAGGCTGCAATAAAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000473287.1
ENST00000474393.5
CDS CAA 72 bp GTCTCCCGCCTCGGAGCGCAGCGCCGGAGGGCTTCCTaGCATCCCTTCCCAGGCGGGACCAGGGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: VSRLGAQRRRAS*HPFPGGTREAG
Trigger: CCCGGCCTCCCTGGTCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCGCTGCGCTCCGAGGCGGGAGAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS GCA 72 bp TCTCCCGCCTCGGAGCGCAGCGCCGGAGGGCTTCCTTaGATCCCTTCCCAGGCGGGACCAGGGAGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: SPASERSAGGLP*IPSQAGPGRPG
Trigger: TCCCGGCCTCCCTGGTCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCGCTGCGCTCCGAGGCGGGAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS GCA 72 bp AGCCCTGAGAGCTTCCTGCAGCTGTCCCGGACCCACTaGCGGCTCTGCATGGCAGCCACCCCTCGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: SPESFLQLSRTH*RLCMAATPRPR
Trigger: CCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS GCA 72 bp TGCCGGCTCTGCATGGCAGCCACCCCTCGCCCGCGGTaGAGTTTGATCACACGCTGCGCCACCTCCTCGTGC +
Preference number: 6 (lower is better)
Translates to: CRLCMAATPRPR*SLITRCATSSC
Trigger: GCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS TCA 72 bp GGCTGGACCGTCTCTCCGGTCTGGGCACACACCTCGTaGTTGCAGCTCTCCACAGCACCGGGGCGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: GWTVSPVWAHTS*LQLSTAPGRAR
Trigger: TCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTGCCCAGACCGGAGAGACGGTCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434316.7
ENST00000460039.5
ENST00000491166.1
CDS GCA 72 bp GGACCGTCTCTCCGGTCTGGGCACACACCTCGTGATTaGAGCTCTCCACAGCACCGGGGCGAGCAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: GPSLRSGHTPRD*SSPQHRGEQEA
Trigger: AGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGTGTGTGCCCAGACCGGAGAGACGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434316.7
ENST00000460039.5
ENST00000491166.1
CDS GCA 72 bp ATGAGAGTCGGCATGACGGCCATGAAGAGCCCGAGCTaGACGTCCTGCGTCACCAGCATGCCGAGGAGCACG +
Preference number: 6 (lower is better)
Translates to: MRVGMTAMKSPS*TSCVTSMPRST
Trigger: CGTGCTCCTCGGCATGCTGGTGACGCAGGACGTGCAGCTCGGGCTCTTCATGGCCGTCATGCCGACTCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434316.7
ENST00000465556.1
ENST00000474393.5
CDS GCA 72 bp GTGCACTGCAAGCGTTGGGAGGTGAGGCCTCGTGATTaGAGCTCTCCACAGCACCGGGGCGAGCAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VHCKRWEVRPRD*SSPQHRGEQEA
Trigger: AGCCTCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS CAA 90 bp CGGAGGGCAGGGCACAGCAATCCACGGGTCTCTGCCCCACTGAGCTaGCATGTCAGACACACATTTTCAGCGGGACGCAGGGATCCGCGC +
Preference number: 6 (lower is better)
Translates to: RRAGHSNPRVSAPLS*HVRHTFSAGRRDPR
Trigger: GCGCGGATCCCTGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCCTGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS TCA 72 bp CGATGTGCACTGCAAGCGTTGGGAGGTGAGGCCTCGTaGTTGCAGCTCTCCACAGCACCGGGGCGAGCAAGA +
Preference number: 6 (lower is better)
Translates to: RCALQALGGEAS*LQLSTAPGRAR
Trigger: TCTTGCTCGCCCCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS TCA 72 bp TCTGTCCCCTCGATGTGCACTGCAAGCGTTGGGAGGTaGGGCCTCGTGATTGCAGCTCTCCACAGCACCGGG +
Preference number: 6 (lower is better)
Translates to: SVPSMCTASVGR*GLVIAALHSTG
Trigger: CCCGGTGCTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS GCA 72 bp GCACGTCCTGCGTCACCAGCATGCCGAGGAGCACGGTaGTGTAGTCAATGTCGCCTTCTTTGTCACCCCGAG +
Preference number: 6 (lower is better)
Translates to: ARPASPACRGAR*CSQCRLLCHPE
Trigger: CTCGGGGTGACAAAGAAGGCGACATTGACTACAGCACCGTGCTCCTCGGCATGCTGGTGACGCAGGACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434316.7
ENST00000474393.5
CDS TCA 72 bp GGGCAGGGCACAGCAATCCACGGGTCTCTGCCCCACTaGGCTTGCATGTCAGACACACATTTTCAGCGGGAC +
Preference number: 6 (lower is better)
Translates to: GQGTAIHGSLPH*ACMSDTHFQRD
Trigger: GTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS CCA 72 bp GGAACACGTGGAGCCCTATGGAGGCGAAGAAAACGATaGCCAGGAAGTCGCGGATGGGTTCGATGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GTRGALWRRRKR*PGSRGWVRWRW
Trigger: CCACCTCCATCGAACCCATCCGCGACTTCCTGGCCATCGTTTTCTTCGCCTCCATAGGGCTCCACGTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434316.7
CDS CCA 72 bp GTACGCCACAAACGTGGGGAACACGTGGAGCCCTGTTaGGAACAGGACAGACACGTTACGACCGCAGGACAG +
Preference number: 6 (lower is better)
Translates to: VRHKRGEHVEPC*EQDRHVTTAGQ
Trigger: CTGTCCTGCGGTCGTAACGTGTCTGTCCTGTTCCCAACAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS CAA 72 bp GGGCACAGCAATCCACGGGTCTCTGCCCCACTGAGCTaGCATGTCAGACACACATTTTCAGCGGGACGCAGG +
Preference number: 6 (lower is better)
Translates to: GHSNPRVSAPLS*HVRHTFSAGRR
Trigger: CCTGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS CAA 72 bp CGTACGCCACAAACGTGGGGAACACGTGGAGCCCTGTaGGGAACAGGACAGACACGTTACGACCGCAGGACA +
Preference number: 6 (lower is better)
Translates to: RTPQTWGTRGAL*GTGQTRYDRRT
Trigger: TGTCCTGCGGTCGTAACGTGTCTGTCCTGTTCCCAACAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS TCA 72 bp CAATGTCGCCTTCTTTGTCACCCCGAGCACTGCCCATaGGGAACCTGGACACGAGGGGTGTGCTTGACAAGG +
Preference number: 6 (lower is better)
Translates to: QCRLLCHPEHCP*GTWTRGVCLTR
Trigger: CCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS CCA 72 bp ACCGTGAGCTCGTACGCCACAAACGTGGGGAACACGTaGAGCCCTGTTGGGAACAGGACAGACACGTTACGA +
Preference number: 6 (lower is better)
Translates to: TVSSYATNVGNT*SPVGNRTDTLR
Trigger: TCGTAACGTGTCTGTCCTGTTCCCAACAGGGCTCCACGTGTTCCCCACGTTTGTGGCGTACGAGCTCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS TCA 72 bp TTCTGTTGCCTTCTTTGTCACCCCGAGCACTGCCCATaGGGAACCTGGACACGAGGGGTGTGCTTGACAAGG +
Preference number: 6 (lower is better)
Translates to: FCCLLCHPEHCP*GTWTRGVCLTR
Trigger: CCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGCAACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375391.5
CDS GCA 72 bp TCCTTTATTGCAGCCTCTCTCAGGGCCTCCAGGCGCTaGCGGCTGCTCTCCTTCATGTTCACGACATCTTTG +
Preference number: 6 (lower is better)
Translates to: SFIAASLRASRR*RLLSFMFTTSL
Trigger: CAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000473287.1
ENST00000474393.5
CDS GCA 72 bp CTACGGTTCAAATGCTTCTGTCCCCTCGATGTGCACTaGAAGCGTTGGGAGGTGAGGCCTCGTGATTGCAGC +
Preference number: 6 (lower is better)
Translates to: LRFKCFCPLDVH*KRWEVRPRDCS
Trigger: GCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS CCA 72 bp AAATGCTTCTGTCCCCTCGATGTGCACTGCAAGCGTTaGGAGGTGAGGCCTCGTGATTGCAGCTCTCCACAG +
Preference number: 6 (lower is better)
Translates to: KCFCPLDVHCKR*EVRPRDCSSPQ
Trigger: CTGTGGAGAGCTGCAATCACGAGGCCTCACCTCCCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619336.1
ENST00000620021.4
CDS CAA 72 bp GACAGACACGTGGAAATGAAGACGCTCTGCGTGGGTTaGATCCGCAAGAGATGCCCCCACAGCAAGCCAAAT +
Preference number: 6 (lower is better)
Translates to: DRHVEMKTLCVG*IRKRCPHSKPN
Trigger: ATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS GCA 72 bp ACTCCACTGTATCCTGAATGCCTGCTACGGTTCAAATaGTTCTGTCCCCTCGATGTGCACTGCAAGCGTTGG +
Preference number: 6 (lower is better)
Translates to: TPLYPECLLRFK*FCPLDVHCKRW
Trigger: CCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAGCAGGCATTCAGGATACAGTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS CAA 90 bp GACAGGCCCACGTCTTTCTCCACTGCTCCAATTGCAGTTTTCAGTTaGTTCAGAACTGCATTCTTCTGGCGGAGAAGCCCTGAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: DRPTSFSTAPIAVFS*FRTAFFWRRSPESF
Trigger: GAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS CAA 90 bp CTTGACAAGGACAGACACGTGGAAATGAAGACGCTCTGCGTGGGTTaGATCCGCAAGAGATGCCCCCACAGCAAGCCAAATGCAATCATT +
Preference number: 6 (lower is better)
Translates to: LDKDRHVEMKTLCVG*IRKRCPHSKPNAII
Trigger: AATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS GCA 72 bp TACTCTCATCAAGTCGGTTTCCTGCTACGGTTCAAATaGTTCTGTCCCCTCGATGTGCACTGCAAGCGTTGG +
Preference number: 6 (lower is better)
Translates to: YSHQVGFLLRFK*FCPLDVHCKRW
Trigger: CCAACGCTTGCAGTGCACATCGAGGGGACAGAAGCATTTGAACCGTAGCAGGAAACCGACTTGATGAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619336.1
CDS GCA 72 bp ATGAAGACGCTCTGCGTGGGTTTGATCCGCAAGAGATaGCCCCACAGCAAGCCAAATGCAATCATTAACAGT +
Preference number: 6 (lower is better)
Translates to: MKTLCVGLIRKR*PHSKPNAIINS
Trigger: ACTGTTAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
CDS GCA 72 bp GGGGAGTTTGATGTTACTCTCATCAAGTCGGTTTCCTaGTACGGTTCAAATGCTTCTGTCCCCTCGATGTGC +
Preference number: 6 (lower is better)
Translates to: GEFDVTLIKSVS*YGSNASVPSMC
Trigger: GCACATCGAGGGGACAGAAGCATTTGAACCGTAGCAGGAAACCGACTTGATGAGAGTAACATCAAACTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619336.1
CDS CAA 90 bp GCACGTGGGATGGTTGAATCTCTGGGCTTGGTCAAAATATACTGGTaGTTCTGGGAGTCAATCAGCATGCTAAGACCCAAGTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: ARGMVESLGLVKIYW*FWESISMLRPKSSS
Trigger: GGAGGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS TCA 72 bp GAATATTCTGTAAAAGCCGGGATAACACGACTGCACTaGCGCTCTGCTAGAGGGCTGTTCTGTTGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: EYSVKAGITRLH*RSARGLFCCLL
Trigger: AAGAAGGCAACAGAACAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTATCCCGGCTTTTACAGAATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375391.5
CDS TCA 72 bp AAAAAGTCACCCTGTTGCAGAGACTCCACTGTATCCTaGATGCCTGCTACGGTTCAAATGCTTCTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: KKSPCCRDSTVS*MPATVQMLLSP
Trigger: AGGGGACAGAAGCATTTGAACCGTAGCAGGCATTCAGGATACAGTGGAGTCTCTGCAACAGGGTGACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620021.4
CDS CCA 72 bp GGGATGGTTGAATCTCTGGGCTTGGTCAAAATATACTaGTTGTTCTGGGAGTCAATCAGCATGCTAAGACCC +
Preference number: 6 (lower is better)
Translates to: GMVESLGLVKIY*LFWESISMLRP
Trigger: GGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS CAA 72 bp ACGTCTTTCTCCACTGCTCCAATTGCAGTTTTCAGTTaGTTCAGAACTGCATTCTTCTGGCGGAGAAGCCCT +
Preference number: 6 (lower is better)
Translates to: TSFSTAPIAVFS*FRTAFFWRRSP
Trigger: AGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS TCA 72 bp TTCAGCTCTTTCTGGAAAATTTCAAACGTGTGCACCTaGAACAGTTTCTCTTCATCCGACAGGCCCACGTCT +
Preference number: 6 (lower is better)
Translates to: FSSFWKISNVCT*NSFSSSDRPTS
Trigger: AGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000474393.5
CDS GCA 72 bp AGCATGTTCCTCTATCTCTTCCTCCAGACGATCCGCTaGCTTTCTTACATCTTCAAGAATCTCGTCAAGCAT +
Preference number: 6 (lower is better)
Translates to: SMFLYLFLQTIR*LSYIFKNLVKH
Trigger: ATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGATAGAGGAACATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000473287.1
ENST00000474393.5
CDS CCA 72 bp GAATCTCTGGGCTTGGTCAAAATATACTGGTTGTTCTaGGAGTCAATCAGCATGCTAAGACCCAAGTCATCC +
Preference number: 6 (lower is better)
Translates to: ESLGLVKIYWLF*ESISMLRPKSS
Trigger: GGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS TCA 72 bp ACAACATGTCTTCTGATTAGTGAGTGGCTCAGGAGGTaGAGAAGCAGCTGTTCTGGAACGCTTACTGATTTA +
Preference number: 6 (lower is better)
Translates to: TTCLLISEWLRR*RSSCSGTLTDL
Trigger: TAAATCAGTAAGCGTTCCAGAACAGCTGCTTCTTCACCTCCTGAGCCACTCACTAATCAGAAGACATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473287.1
CDS GCA 72 bp CAGATATTCCCAAGATCAGGATTTCTTTGTTCCCCTTaGTTTCCATGTGCAGCTTCCGATAATAGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: QIFPRSGFLCSP*FPCAASDNRVQ
Trigger: TTGGACCCTATTATCGGAAGCTGCACATGGAAAGCAAGGGGAACAAAGAAATCCTGATCTTGGGAATATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434316.7
ENST00000474393.5
CDS TCA 72 bp GTCCTTTATAAAGTGGTGATCTGCACGTGGGATGGTTaGATCTCTGGGCTTGGTCAAAATATACTGGTTGTT +
Preference number: 6 (lower is better)
Translates to: VLYKVVICTWDG*ISGLGQNILVV
Trigger: AACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000462877.5
ENST00000474393.5
ENST00000622371.1
CDS GCA 72 bp AGCGCACACTATTTCTCACAACTTCAGTGTGTCACTTaGTTCAATACAGGAATTAAAATCCTAAATCCTCCC +
Preference number: 6 (lower is better)
Translates to: SAHYFSQLQCVT*FNTGIKILNPP
Trigger: GGGAGGATTTAGGATTTTAATTCCTGTATTGAAGCAAGTGACACACTGAAGTTGTGAGAAATAGTGTGCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491166.1
CDS GCA 72 bp TTGCATATTTTTAAGGGCTTCAACTTGATGTTTTTCTaGTGCCAGAAGTTCCATATATTCTGTTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LHIFKGFNLMFF*CQKFHIFCFFL
Trigger: AAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000375391.5
ENST00000434316.7
ENST00000473287.1
ENST00000474393.5