Pregenerated sensors for TMCO2 (Homo sapiens)
Ensembl gene IDs: ENSG00000188800Ensembl transcript IDs: ENST00000372766.4, ENST00000468258.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GCGTTCTCTATCTTTATTGATACACCACTGCACACATaGGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: AFSIFIDTPLHT*GKQCFPGKDWS Trigger: ACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CCA 90 bp | TCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCCTGGTGGACAAGGGACTCTaGCAGTCAGAGCAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLSLLIHHCTHEGNSAFLVDKGL*QSEQLQ Trigger: CTGCAGCTGCTCTGACTGCCAGAGTCCCTTGTCCAC...CAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTCCCAAACTTGTTTGCTaGGGTGCACTAGTCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: CTHEGNSAFLEKIGVHHIPKLVC*GALVSP Trigger: GGGAGAGACTAGTGCACCTCAGCAAACAAGTTTGGG...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | TCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCCTGACACCACTGCACACATaGGGGAAACAGTGCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLSLLIHHCTHEGNSAFLTPLHT*GKQCFP Trigger: AGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGT...CAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTTTCGTGGCAGGTTTTTaGGCAACGATTATCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CTHEGNSAFLEKIGVHHIFVAGF*ATIIPS Trigger: AGAAGGGATAATCGTTGCTCAAAAACCTGCCACGAA...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CCA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCAGCAATCCCTCTTCGTaGCAGGTTTTTGAGCAACGA | + |
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Preference number: 4 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFSNPSS*QVFEQR Trigger: TCGTTGCTCAAAAACCTGCCACGAAGAGGGATTGCT...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTAAGAAATCCTCAAGATaGTTTGCACAGCTGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CTHEGNSAFLEKIGVHHIKKSSR*FAQLEQ Trigger: TTGCTCCAGCTGTGCAAATCATCTTGAGGATTTCTT...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CCA 90 bp | TCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCCTGCACTTCCTTCTGGGTTaGCTAGCAAAGCCTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SLSLLIHHCTHEGNSAFLHFLLG*LAKPQK Trigger: TTTTTGAGGCTTTGCTAGCCAACCCAGAAGGAAGTG...CAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR GCA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTTCTAGGAACTACATGTaGAGAAGCTTCAGGAATCTA | + |
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Preference number: 4 (lower is better) Translates to: CTHEGNSAFLEKIGVHHISRNYM*RSFRNL Trigger: TAGATTCCTGAAGCTTCTGCACATGTAGTTCCTAGA...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCGTTCTCTATCTTTATTaGTACACCACTGCACACATG | + |
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Preference number: 4 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFVLYLY*YTTAHM Trigger: CATGTGTGCAGTGGTGTATCAATAAAGATAGAGAAC...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR GCA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCATCCTCAAGATGATTTaGACAGCTGGAGCAAGATTA | + |
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Preference number: 4 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFILKMI*TAGARL Trigger: TAATCTTGCTCCAGCTGTGCAAATCATCTTGAGGAT...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR GCA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCTTATTGATACACCACTaGACACATGAGGGAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFLLIHH*THEGNS Trigger: ACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAA...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCAGCCTCAAAAATATGTaGGCCCTTCTTGTAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFSLKNM*ALLVKF Trigger: AAACTTTACAAGAAGGGCTCACATATTTTTGAGGCT...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR TCA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCAGATTATTATTGTCTTaGATTCGGAGACCACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFRLLLS*IRRPLP Trigger: AGGAAGTGGTCTCCGAATTCAAGACAATAATAATCT...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS CCA 90 bp | AGTCAGAGCAGCTGCAGTAGGGCTCAGAGGAGCAATCCCTCTTCGTaGCAGGTTTTTGAGCAACGATTATCCCTTCTAGGTTCTTCATTT | + |
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Preference number: 5 (lower is better) Translates to: SQSSCSRAQRSNPSS*QVFEQRLSLLGSSF Trigger: AAATGAAGAACCTAGAAGGGATAATCGTTGCTCAAAAACCTGCCACGAAGAGGGATTGCTCCTCTGAGCCCTACTGCAGCTGCTCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372766.4 ENST00000468258.1 |
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| CDS-3UTR CAA 90 bp | TCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCCTGCCACTTCCTTCTGGGTaGGCTAGCAAAGCCTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: SLSLLIHHCTHEGNSAFLPLPSG*ASKASK Trigger: TTTTGAGGCTTTGCTAGCCAACCCAGAAGGAAGTGG...CAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CAA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTCTTCGTGGCAGGTTTTaGAGCAACGATTATCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CTHEGNSAFLEKIGVHHILRGRF*SNDYPF Trigger: GAAGGGATAATCGTTGCTCAAAAACCTGCCACGAAG...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CAA 90 bp | CGTTCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCAGAGACTCTAAGAGGTaGTCCCAGCTAGAAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: RSLSLLIHHCTHEGNSAFRDSKR*SQLEDE Trigger: TTCATCTTCTAGCTGGGACAACCTCTTAGAGTCTCT...GAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CAA 90 bp | TCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCCTGAATCCTCAAGATGATTaGCACAGCTGGAGCAAGATT | + |
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Preference number: 5 (lower is better) Translates to: SLSLLIHHCTHEGNSAFLNPQDD*HSWSKI Trigger: AATCTTGCTCCAGCTGTGCAAATCATCTTGAGGATT...CAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CAA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTCTTTCCTGGAAAAGATaGGAGTCCATCACATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: CTHEGNSAFLEKIGVHHILSWKR*ESITFQ Trigger: TTGAAATGTGATGGACTCCAATCTTTTCCAGGAAAG...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CAA 90 bp | TGCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATTGGAGTCCATCACATTAAGATTATTATTGTCTaGAATTCGGAGACCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: CTHEGNSAFLEKIGVHHIKIIIV*NSETTS Trigger: GGAAGTGGTCTCCGAATTCAAGACAATAATAATCTT...AATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS-3UTR CAA 90 bp | TCTCTATCTTTATTGATACACCACTGCACACATGAGGGAAACAGTGCTTTCCTGTTTCAAAATTTTCTCTaGCAGACCCAAGGACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: SLSLLIHHCTHEGNSAFLFQNFL*QTQGQE Trigger: TTCCTGTCCTTGGGTCTGCAAGAGAAAATTTTGAAA...CAGGAAAGCACTGTTTCCCTCATGTGTGCAGTGGTGTATCAATAAAGATAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS TCA 90 bp | AAGCCTCAAAAATATGTGAGCCCTTCTTGTAAAGTTTGTAGAGTGTaGTTACAAACAACAATGTTTTCTGTAGTCCCAGCTACTTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KPQKYVSPSCKVCRV*LQTTMFSVVPATWE Trigger: CTCCCAAGTAGCTGGGACTACAGAAAACATTGTTGTTTGTAATCACACTCTACAAACTTTACAAGAAGGGCTCACATATTTTTGAGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468258.1 |
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| CDS GCA 90 bp | ATTCCTATTCCCAATAAAATCAAGAAAGAAATCCTCAAGATGATTTaGACAGCTGGAGCAAGATTATCTAATAGTCCCAAACTTGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: IPIPNKIKKEILKMI*TAGARLSNSPKLVC Trigger: GCAAACAAGTTTGGGACTATTAGATAATCTTGCTCCAGCTGTGCAAATCATCTTGAGGATTTCTTTCTTGATTTTATTGGGAATAGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS GCA 72 bp | CTGATGTGGACAAGGGACTCTGGCAGTCAGAGCAGCTaGAGTAGGGCTCAGAGGAGCAATCCCTCTTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: LMWTRDSGSQSS*SRAQRSNPSSW Trigger: CCACGAAGAGGGATTGCTCCTCTGAGCCCTACTGCAGCTGCTCTGACTGCCAGAGTCCCTTGTCCACATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000372766.4 ENST00000468258.1 |
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| CDS CCA 72 bp | AGCTGCAGTAGGGCTCAGAGGAGCAATCCCTCTTCGTaGCAGGTTTTTGAGCAACGATTATCCCTTCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: SCSRAQRSNPSS*QVFEQRLSLLG Trigger: ACCTAGAAGGGATAATCGTTGCTCAAAAACCTGCCACGAAGAGGGATTGCTCCTCTGAGCCCTACTGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000372766.4 ENST00000468258.1 |
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| CDS TCA 72 bp | GGCTCAGAGGAGCAATCCCTCTTCGTGGCAGGTTTTTaGGCAACGATTATCCCTTCTAGGTTCTTCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: GSEEQSLFVAGF*ATIIPSRFFIL Trigger: CAAAATGAAGAACCTAGAAGGGATAATCGTTGCTCAAAAACCTGCCACGAAGAGGGATTGCTCCTCTGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372766.4 ENST00000468258.1 |
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| CDS CAA 72 bp | GCACACATGAGGGAAACAGTGCTTTCCTGGAAAAGATaGGAGTCCATCACATTTCAAATGGGGGAAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: AHMRETVLSWKR*ESITFQMGEVN Trigger: GTTTACTTCCCCCATTTGAAATGTGATGGACTCCAATCTTTTCCAGGAAAGCACTGTTTCCCTCATGTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000372766.4 ENST00000468258.1 |
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| CDS CAA 72 bp | TTCCATACTGTGCTGAGAGAGAGAGACTCTAAGAGGTaGTCCCAGCTAGAAGATGAAGATGTTGACATTTTA | + |
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Preference number: 6 (lower is better) Translates to: FHTVLRERDSKR*SQLEDEDVDIL Trigger: TAAAATGTCAACATCTTCATCTTCTAGCTGGGACAACCTCTTAGAGTCTCTCTCTCTCAGCACAGTATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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| CDS CAA 90 bp | TGTATCCAATTCCATACTGTGCTGAGAGAGAGAGACTCTAAGAGGTaGTCCCAGCTAGAAGATGAAGATGTTGACATTTTAATAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CIQFHTVLRERDSKR*SQLEDEDVDILISS Trigger: GCTGCTTATTAAAATGTCAACATCTTCATCTTCTAGCTGGGACAACCTCTTAGAGTCTCTCTCTCTCAGCACAGTATGGAATTGGATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372766.4 |
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