RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMCC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000057704

Ensembl transcript IDs: ENST00000261226.9, ENST00000548918.1, ENST00000551457.1, ENST00000552239.1

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCAGGGGGACCTGATGTCTCCTGGAAGAAAACGTACACTCACATaGCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGG +
Preference number: 1 (lower is better)
Translates to: IQGDLMSPGRKRTLT*LPACSRWREWWDKG
Trigger: CCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTCCCCCTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 90 bp GGACCTGATGTCTCCTGGAAGAAAACGTACACTCACATGCCTTCCTaGCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAG +
Preference number: 1 (lower is better)
Translates to: GPDVSWKKTYTHMPS*LQQMAGVVGQGAQQ
Trigger: CTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 90 bp CTGATGTCTCCTGGAAGAAAACGTACACTCACATGCCTTCCTGCCTaGAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGT +
Preference number: 1 (lower is better)
Translates to: LMSPGRKRTLTCLPA*SRWREWWDKGLNSS
Trigger: ACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGGAGACATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 90 bp CCTGGAAGAAAACGTACACTCACATGCCTTCCTGCCTGCAGCAGATaGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCATGAA +
Preference number: 1 (lower is better)
Translates to: PGRKRTLTCLPACSR*REWWDKGLNSSFHE
Trigger: TTCATGGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 90 bp AAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTaGAAAGATTCACAGATACCAAGAGGGGCCCACCCAGGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: KLTAALNPWCVRSGA*KDSQIPRGAHPGPS
Trigger: GCTGGGGCCTGGGTGGGCCCCTCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 90 bp GATTTCCACGTTACAGGGTCATACACGACTGACTGCTGTGGACACTaGGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: DFHVTGSYTTDCCGH*VHDGTYGPLERSRV
Trigger: CACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCGTGTATGACCCTGTAACGTGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 90 bp GGAAAGATTCACAGATACCAAGAGGGGCCCACCCAGGCCCCAGCTTaGTTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAG +
Preference number: 1 (lower is better)
Translates to: GKIHRYQEGPTQAPA*FRSVSYTQHSAHAE
Trigger: CTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAATCAAGCTGGGGCCTGGGTGGGCCCCTCTTGGTATCTGTGAATCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 90 bp CAATTATGCCAAGGTCTCAATATACAGAGGTTTACCACGCTGGGCTaGTCAGGTGGGCAGGAAATCGGTCTGATTAAGGCAGTGAGCAAG +
Preference number: 1 (lower is better)
Translates to: QLCQGLNIQRFTTLG*SGGQEIGLIKAVSK
Trigger: CTTGCTCACTGCCTTAATCAGACCGATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCTTGGCATAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 90 bp CAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCATaGACATTGTTTCCATCTTCCTCTTTGTTATACACACAGAGACAC +
Preference number: 1 (lower is better)
Translates to: QMAGVVGQGAQQQFP*TLFPSSSLLYTQRH
Trigger: GTGTCTCTGTGTGTATAACAAAGAGGAAGATGGAAACAATGTTCATGGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 90 bp CAGTCTGATGAGGGATTTGAAAACATTCCTGCACACTCTGAAGGCTaGGCATTTGCTAGCCAGTTGAGACAAAATCAGGTGTTGGTTGCC +
Preference number: 1 (lower is better)
Translates to: QSDEGFENIPAHSEG*AFASQLRQNQVLVA
Trigger: GGCAACCAACACCTGATTTTGTCTCAACTGGCTAGCAAATGCCCAGCCTTCAGAGTGTGCAGGAATGTTTTCAAATCCCTCATCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 90 bp AAAACATTCCTGCACACTCTGAAGGCTGGGCATTTGCTAGCCAGTTaGGACAAAATCAGGTGTTGGTTGCCTGGGTATGAGAAGGTGAAA +
Preference number: 1 (lower is better)
Translates to: KTFLHTLKAGHLLAS*DKIRCWLPGYEKVK
Trigger: TTTCACCTTCTCATACCCAGGCAACCAACACCTGATTTTGTCTCAACTGGCTAGCAAATGCCCAGCCTTCAGAGTGTGCAGGAATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 90 bp TCACCGGCTGAAATGAAAGACGGAGTTTCGGAAGATTTCCTTCTGTaGATAGCTGACAAGGATCACGCAGGCAAAAATGCTACCGTTCCA +
Preference number: 1 (lower is better)
Translates to: SPAEMKDGVSEDFLL*IADKDHAGKNATVP
Trigger: TGGAACGGTAGCATTTTTGCCTGCGTGATCCTTGTCAGCTATTCACAGAAGGAAATCTTCCGAAACTCCGTCTTTCATTTCAGCCGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR TCA 90 bp TTTGCTAGCCAGTTGAGACAAAATCAGGTGTTGGTTGCCTGGGTATaGGAAGGTGAAAGCCCCATTCATAAATCCCTATGCCTTCCCATT +
Preference number: 1 (lower is better)
Translates to: FASQLRQNQVLVAWV*EGESPIHKSLCLPI
Trigger: AATGGGAAGGCATAGGGATTTATGAATGGGGCTTTCACCTTCTCATACCCAGGCAACCAACACCTGATTTTGTCTCAACTGGCTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 90 bp AAGAGTGACAGAGCTGGAAAGAGCGAAAACCACATGAATGCTAATTaGCAGAGAAGGATAACAGCCTCACCGGCTGAAATGAAAGACGGA +
Preference number: 1 (lower is better)
Translates to: KSDRAGKSENHMNAN*QRRITASPAEMKDG
Trigger: TCCGTCTTTCATTTCAGCCGGTGAGGCTGTTATCCTTCTCTGTCAATTAGCATTCATGTGGTTTTCGCTCTTTCCAGCTCTGTCACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR-3UTR CCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCGCACACTCTGAAGGCTaGGCATTTGCTAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: CLPACSRWREWWDKGLNSAHSEG*AFASQL
Trigger: CAACTGGCTAGCAAATGCCCAGCCTTCAGAGTGTGC...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCTCTGCCTCCCTGCCTTaGACCTGGCCTCCTTATCTG +
Preference number: 2 (lower is better)
Translates to: GVGWCENEAYVFLDPPRASASLP*TWPPYL
Trigger: CAGATAAGGAGGCCAGGTGCAAGGCAGGGAGGCAGA...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCTTCTCTCTGCCTCCCTaGCTTGCACCTGGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAFSLPP*LAPGLL
Trigger: AAGGAGGCCAGGTGCAAGGCAGGGAGGCAGAGAGAA...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCGCTGGGCTGGTCAGGTaGGCAGGAAATCGGTCTGAT +
Preference number: 2 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAAGLVR*AGNRSD
Trigger: ATCAGACCGATTTCCTGCCCACCTGACCAGCCCAGC...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAAGAGGTTTACCACGCTaGGCTGGTCAGGTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TEYMTGPMVPWREAGWITRGLPR*AGQVGR
Trigger: CCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCT...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCTTCCTGAGTAAGCTTTaGAGTCCCTCACAGACCTGT +
Preference number: 2 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSFLSKL*SPSQTC
Trigger: ACAGGTCTGTGAGGGACTGCAAAGCTTACTCAGGAA...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCGACAAAATCAGGTGTTaGTTGCCTGGGTATGAGAAG +
Preference number: 2 (lower is better)
Translates to: CLPACSRWREWWDKGLNSDKIRC*LPGYEK
Trigger: CTTCTCATACCCAGGCAACCAACACCTGATTTTGTC...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCCAATCTTCATCCAGGTaGACTGCTCCCACTAATCTA +
Preference number: 2 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSQSSSR*TAPTNL
Trigger: TAGATTAGTGGGAGCAGTTCACCTGGATGAAGATTG...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAGAGGTTTACCACGCTaGGCTGGTCAGGTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKRGLPR*AGQVGR
Trigger: CCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAGATGGCGGGAGTGGTaGGACAAGGGGCTCAACAGC +
Preference number: 2 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKRWREW*DKGLNS
Trigger: GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGCCTGCCTGCAGCAGATaGCGGGAGTGGTGGGACAAG +
Preference number: 2 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWPACSR*REWWDK
Trigger: CTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGG...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCATGAATCACATAAAGTaGATCATATCCTCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSMNHIK*IISSRG
Trigger: CCCCCTGGAGGATATGATTCACTTTATGTGATTCAT...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGACTCACATGCCTTCCTaGCTGCAGCAGATGGCGGGA +
Preference number: 2 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKTHMPS*LQQMAG
Trigger: TCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGGACCTATGGTCCCCTaGAGAGAAGCAGGGTGGATC +
Preference number: 2 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLGPMVP*REAGWI
Trigger: GATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACTGGACACTGAGTACATaGCGGGACCTATGGTCCCCT +
Preference number: 2 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHWTLST*RDLWSP
Trigger: AGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCA...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCTTCCTGAGTAAGCTTTaGAGTCCCTCACAGACCTGT +
Preference number: 2 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAFLSKL*SPSQTC
Trigger: ACAGGTCTGTGAGGGACTGCAAAGCTTACTCAGGAA...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTTCTGCCTCCCTGCCTTaGACCTGGCCTCCTTATCTG +
Preference number: 2 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPSASLP*TWPPYL
Trigger: CAGATAAGGAGGCCAGGTGCAAGGCAGGGAGGCAGA...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGCTGGGCTGGTCAGGTaGGCAGGAAATCGGTCTGAT +
Preference number: 2 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPAGLVR*AGNRSD
Trigger: ATCAGACCGATTTCCTGCCCACCTGACCAGCCCAGC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGAAGCCTACGTCTTCTTaGACCCTCCCAGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLKPTSS*TLPEPF
Trigger: GAAGGGCTCTGGGAGGGTCCAAGAAGACGTAGGCTT...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAAAGGTAGGAGAGCTCTaGAACAGATTCGTGTTAACG +
Preference number: 2 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRKVGEL*NRFVLT
Trigger: CGTTAACACGAATCTGTTTCAGAGCTCTCCTACCTT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGATGTGAAGCTCAATTCTaGCAGAGACTTAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRCEAQF*QRLRRE
Trigger: CTCTCTCCTAAGTCTCTGTCAGAATTGAGCTTCACA...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACAGGGTCATACACGACTaGCTGCTGTGGACACTGAGT +
Preference number: 2 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHRVIHD*LLWTLS
Trigger: ACTCAGTGTCCACAGCAGTCAGTCGTGTATGACCCT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCACACCTCAGTGCACTTaGACTTTAGAGGCTATGGTT +
Preference number: 2 (lower is better)
Translates to: GVGWCENEAYVFLDPPRATPQCT*TLEAMV
Trigger: AACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGT...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGAATCCAGGGGGACCTaGTGTCTCCTGGAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLESRGT*CLLEEN
Trigger: GTTTTCTTCCAGGAGACATCAGGTCCCCCTGGATTC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACATTGGTTGCCTGGGTATaGGAAGGTGAAAGCCCCATT +
Preference number: 2 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTLVAWV*EGESPI
Trigger: AATGGGGCTTTCACCTTCTCATACCCAGGCAACCAA...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATGCACATTTGCTAGGCTaGGCACTGGAATGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDAHLLG*ALEWCG
Trigger: CCCACACCATTCCAGTGCTCAGCCTAGCAAATGTGC...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGTCCTCGTTTCCTCATaGTTTCAGCGTTCCGACACC +
Preference number: 2 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPVLVSS*FQRSDT
Trigger: GGTGTCGGAACGCTGAAAGCATGAGGAAACGAGGAC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATTTTACCACGCTGGGCTaGTCAGGTGGGCAGGAAATC +
Preference number: 2 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDFTTLG*SGGQEI
Trigger: GATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAA...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 90 bp AGTGCTAGAATCCAATGTCCAGCATCTTCAACCACTCAGGAGTGTTaGCTGAGAGACCAGGTGGTGCTTACCCACCCAACAAGCACTTTC +
Preference number: 2 (lower is better)
Translates to: SARIQCPASSTTQEC*LRDQVVLTHPTSTF
Trigger: GAAAGTGCTTGTTGGGTGGGTAAGCACCACCTGGTCTCTCAGCAAACACTCCTGAGTGGTTGAAGATGCTGGACATTGGATTCTAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATGACTGCTGTGGACACTaGGTACATGACGGGACCTAT +
Preference number: 2 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDDCCGH*VHDGTY
Trigger: ATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTC...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGAAGGGTCATACACGACTaGCTGCTGTGGACACTGAGT +
Preference number: 2 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRRVIHD*LLWTLS
Trigger: ACTCAGTGTCCACAGCAGTCAGTCGTGTATGACCCT...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGGACCTGATGTCTCCTaGAAGAAAACGTACACTCAC +
Preference number: 2 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLGPDVS*KKTYTH
Trigger: GTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTCC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACGGACCTGATGTCTCCTaGAAGAAAACGTACACTCAC +
Preference number: 2 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHGPDVS*KKTYTH
Trigger: GTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTCC...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCTGGTGTGTCCGAAGTaGTGCTTGGAAAGATTCACA +
Preference number: 2 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKLVCPK*CLERFT
Trigger: TGTGAATCTTTCCAAGCACCACTTCGGACACACCAG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 90 bp GAGAGACCAGGTGGTGCTTACCCACCCAACAAGCACTTTCCATCTTaGGGTTTGCCCAAGATGTTTACCATAAATGAAAGGGGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: ERPGGAYPPNKHFPS*GLPKMFTINERGGE
Trigger: TTCCCCACCCCTTTCATTTATGGTAAACATCTTGGGCAAACCCAAAGATGGAAAGTGCTTGTTGGGTGGGTAAGCACCACCTGGTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR-3UTR TCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACAAACTTGAAAGAACTTaGAGGCAGGAACCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYKLERT*RQEPVA
Trigger: AGCCACTGGTTCCTGCCTTCAAGTTCTTTCAAGTTT...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACAAACTTGAAAGAACTTaGAGGCAGGAACCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHKLERT*RQEPVA
Trigger: AGCCACTGGTTCCTGCCTTCAAGTTCTTTCAAGTTT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAACGAAGTACAAGGACTaGGTTGGCAACTGCTACGGA +
Preference number: 2 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRTKYKD*VGNCYG
Trigger: TCCGTAGCAGTTGCCAACTCAGTCCTTGTACTTCGT...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGAACGAAGTACAAGGACTaGGTTGGCAACTGCTACGGA +
Preference number: 2 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRTKYKD*VGNCYG
Trigger: TCCGTAGCAGTTGCCAACTCAGTCCTTGTACTTCGT...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTGTGAAGCTCAATTCTaGCAGAGACTTAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLCEAQF*QRLRRE
Trigger: CTCTCTCCTAAGTCTCTGTCAGAATTGAGCTTCACA...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCATTTGCTAGCCAGTTaGGACAAAATCAGGTGTTGG +
Preference number: 2 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKHLLAS*DKIRCW
Trigger: CCAACACCTGATTTTGTCTCAACTGGCTAGCAAATG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTGCACATTTGCTAGGCTaGGCACTGGAATGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLAHLLG*ALEWCG
Trigger: CCCACACCATTCCAGTGCTCAGCCTAGCAAATGTGC...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR CAA 90 bp CCAGGTGGTGCTTACCCACCCAACAAGCACTTTCCATCTTTGGGTTaGCCCAAGATGTTTACCATAAATGAAAGGGGTGGGGAAAGGATT +
Preference number: 2 (lower is better)
Translates to: PGGAYPPNKHFPSLG*PKMFTINERGGERI
Trigger: AATCCTTTCCCCACCCCTTTCATTTATGGTAAACATCTTGGGCAAACCCAAAGATGGAAAGTGCTTGTTGGGTGGGTAAGCACCACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR-3UTR GCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGTGTGTCCGAAGTGGTaGTTGGAAAGATTCACAGAT +
Preference number: 2 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPVCPKW*LERFTD
Trigger: ATCTGTGAATCTTTCCAAGCACCACTTCGGACACAC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTATGAATCACATAAAGTaGATCATATCCTCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPMNHIK*IISSRG
Trigger: CCCCCTGGAGGATATGATTCACTTTATGTGATTCAT...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGCAGGATCACCAATTATaGCAAGGTCTCAATATACAG +
Preference number: 2 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLQDHQL*QGLNIQ
Trigger: CTGTATATTGAGACCTTGGCATAATTGGTGATCCTG...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGACACCTCAGTGCACTTaGACTTTAGAGGCTATGGTT +
Preference number: 2 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWTPQCT*TLEAMV
Trigger: AACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGT...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATCAACAGCAGTTTCCATaGACATTGTTTCCATCTTCC +
Preference number: 2 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDQQQFP*TLFPSS
Trigger: GGAAGATGGAAACAATGTTCATGGAAACTGCTGTTG...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGATGTTAAGAGACAGGTaGCAACCTTGGCTCAAACAC +
Preference number: 2 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSMLRDR*QPWLKH
Trigger: GTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACAT...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 90 bp CCTATGCCTTCCCATTTAAAGTGTAACAAAACCCCTCAGGTAGACTaGTTGGATAACAGGTGTGTGATAAGATTTCCACGTTACAGGGTC +
Preference number: 2 (lower is better)
Translates to: PMPSHLKCNKTPQVD*LDNRCVIRFPRYRV
Trigger: GACCCTGTAACGTGGAAATCTTATCACACACCTGTTATCCAACAAGTCTACCTGAGGGGTTTTGTTACACTTTAAATGGGAAGGCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATAAGGGAGCTCTTCTCTaGATCCAAAATACTTTATCA +
Preference number: 2 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDKGALL*IQNTLS
Trigger: TGATAAAGTATTTTGGATTCAGAGAAGAGCTCCCTT...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR TCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTAATCTCCTTACACATTaGAGAGAACAAACAGTGGGA +
Preference number: 2 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLNLLTH*REQTVG
Trigger: TCCCACTGTTTGTTCTCTTCAATGTGTAAGGAGATT...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR CAA 90 bp ATGCCTTCCCATTTAAAGTGTAACAAAACCCCTCAGGTAGACTTGTaGGATAACAGGTGTGTGATAAGATTTCCACGTTACAGGGTCATA +
Preference number: 2 (lower is better)
Translates to: MPSHLKCNKTPQVDL*DNRCVIRFPRYRVI
Trigger: TATGACCCTGTAACGTGGAAATCTTATCACACACCTGTTATCCAACAAGTCTACCTGAGGGGTTTTGTTACACTTTAAATGGGAAGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR GCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCACAGGATCACCAATTATaGCAAGGTCTCAATATACAG +
Preference number: 2 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSQDHQL*QGLNIQ
Trigger: CTGTATATTGAGACCTTGGCATAATTGGTGATCCTG...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 72 bp CCTGGAAGAAAACGTACACTCACATGCCTTCCTGCCTaGAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: PGRKRTLTCLPA*SRWREWWDKGL
Trigger: GAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 72 bp GTCTCCTGGAAGAAAACGTACACTCACATGCCTTCCTaGCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGG +
Preference number: 3 (lower is better)
Translates to: VSWKKTYTHMPS*LQQMAGVVGQG
Trigger: CCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 72 bp GACCTGATGTCTCCTGGAAGAAAACGTACACTCACATaGCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: DLMSPGRKRTLT*LPACSRWREWW
Trigger: CCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCCAGGGATGTGAACTTTaGAATGTTTTCAGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSQGCEL*NVFSSE
Trigger: CTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTG...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCTTTCCATCTTCCTCTTaGTTATACACACAGAGACAC +
Preference number: 3 (lower is better)
Translates to: CLPACSRWREWWDKGLNSFPSSS*LYTQRH
Trigger: GTGTCTCTGTGTGTATAACAAAGAGGAAGATGGAAA...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 72 bp GTTACAGGGTCATACACGACTGACTGCTGTGGACACTaGGTACATGACGGGACCTATGGTCCCCTGGAGAGA +
Preference number: 3 (lower is better)
Translates to: VTGSYTTDCCGH*VHDGTYGPLER
Trigger: TCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCGTGTATGACCCTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 72 bp CACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATaGTTTCAGCGTTCCGACACCTCAGTGCACTTGAAC +
Preference number: 3 (lower is better)
Translates to: HHSVTPYVLVSS*FQRSDTSVHLN
Trigger: GTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR GCA 72 bp AACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTaGTTGGAAAGATTCACAGATACCAAGAGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: NSSTQSLVCPKW*LERFTDTKRGP
Trigger: TGGGCCCCTCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCGCATTTGCTAGCCAGTaGAGACAAAATCAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAAFASQ*RQNQVL
Trigger: CAACACCTGATTTTGTCTCAACTGGCTAGCAAATGC...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACACCCCTCAGGTAGACTaGTTGGATAACAGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHTPQVD*LDNRCV
Trigger: CACACACCTGTTATCCAACAAGTCTACCTGAGGGGT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACACCCCTCAGGTAGACTaGTTGGATAACAGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYTPQVD*LDNRCV
Trigger: CACACACCTGTTATCCAACAAGTCTACCTGAGGGGT...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGAGACAGGTGGCAACCTaGGCTCAAACACTGGACTTA +
Preference number: 3 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLRQVAT*AQTLDL
Trigger: TAAGTCCAGTGTTTGAGCCAAGGTTGCCACCTGTCT...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAGACAGGTGGCAACCTaGGCTCAAACACTGGACTTA +
Preference number: 3 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKRQVAT*AQTLDL
Trigger: TAAGTCCAGTGTTTGAGCCAAGGTTGCCACCTGTCT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 72 bp CTGCACACTCTGAAGGCTGGGCATTTGCTAGCCAGTTaGGACAAAATCAGGTGTTGGTTGCCTGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: LHTLKAGHLLAS*DKIRCWLPGYE
Trigger: CTCATACCCAGGCAACCAACACCTGATTTTGTCTCAACTGGCTAGCAAATGCCCAGCCTTCAGAGTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 72 bp CAAGGTCTCAATATACAGAGGTTTACCACGCTGGGCTaGTCAGGTGGGCAGGAAATCGGTCTGATTAAGGCA +
Preference number: 3 (lower is better)
Translates to: QGLNIQRFTTLG*SGGQEIGLIKA
Trigger: TGCCTTAATCAGACCGATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 72 bp ACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTaGTGCTTGGAAAGATTCACAGATACCAAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: TNSSTQSLVCPK*CLERFTDTKRG
Trigger: GCCCCTCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAGTACAAGGACTGAGTaGGCAACTGCTACGGAGTTA +
Preference number: 3 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKSTRTE*ATATEL
Trigger: TAACTCCGTAGCAGTTGCCAACTCAGTCCTTGTACT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCCTCAGGTAGACTTGTaGGATAACAGGTGTGTGATA +
Preference number: 3 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKPQVDL*DNRCVI
Trigger: TATCACACACCTGTTATCCAACAAGTCTACCTGAGG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGACACCTCAGTGCACTaGAACTTTAGAGGCTATGGT +
Preference number: 3 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPDTSVH*NFRGYG
Trigger: ACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGTC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGCATTTGCTAGCCAGTaGAGACAAAATCAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPAFASQ*RQNQVL
Trigger: CAACACCTGATTTTGTCTCAACTGGCTAGCAAATGC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAGTCTGATGAGGGATTaGAAAACATTCCTGCACACT +
Preference number: 3 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKSLMRD*KTFLHT
Trigger: AGTGTGCAGGAATGTTTTCAAATCCCTCATCAGACT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGAGTACAAGGACTGAGTaGGCAACTGCTACGGAGTTA +
Preference number: 3 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSSTRTE*ATATEL
Trigger: TAACTCCGTAGCAGTTGCCAACTCAGTCCTTGTACT...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGGACACCTCAGTGCACTaGAACTTTAGAGGCTATGGT +
Preference number: 3 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWDTSVH*NFRGYG
Trigger: ACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGTC...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAATATTGCACTTAATTaGAATCCAGGGGGACCTGAT +
Preference number: 3 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKNIALN*NPGGPD
Trigger: ATCAGGTCCCCCTGGATTCAAATTAAGTGCAATATT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 72 bp AGACGGAGTTTCGGAAGATTTCCTTCTGTGAATAGCTaGCAAGGATCACGCAGGCAAAAATGCTACCGTTCC +
Preference number: 3 (lower is better)
Translates to: RRSFGRFPSVNS*QGSRRQKCYRS
Trigger: GGAACGGTAGCATTTTTGCCTGCGTGATCCTTGTCAGCTATTCACAGAAGGAAATCTTCCGAAACTCCGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR CCA 72 bp TGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTaGGGAGAAGATACACGGATCACAGGTCTGAGAAGT +
Preference number: 3 (lower is better)
Translates to: CAAFHSLLYFCH*GEDTRITGLRS
Trigger: ACTTCTCAGACCTGTGATCCGTGTATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATCAGGGATGTGAACTTTaGAATGTTTTCAGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDQGCEL*NVFSSE
Trigger: CTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTG...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 72 bp CAGTTGAGACAAAATCAGGTGTTGGTTGCCTGGGTATaGGAAGGTGAAAGCCCCATTCATAAATCCCTATGC +
Preference number: 3 (lower is better)
Translates to: QLRQNQVLVAWV*EGESPIHKSLC
Trigger: GCATAGGGATTTATGAATGGGGCTTTCACCTTCTCATACCCAGGCAACCAACACCTGATTTTGTCTCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 72 bp GGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCATaGACATTGTTTCCATCTTCCTCTTTGTTATACACA +
Preference number: 3 (lower is better)
Translates to: GVVGQGAQQQFP*TLFPSSSLLYT
Trigger: TGTGTATAACAAAGAGGAAGATGGAAACAATGTTCATGGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGGAATCATGCATATCCTaGCTTTTTATAGGACTCACA +
Preference number: 3 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWESCIS*LFIGLT
Trigger: TGTGAGTCCTATAAAAAGCAAGGATATGCATGATTC...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR-3UTR CAA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAGAATCATGCATATCCTaGCTTTTTATAGGACTCACA +
Preference number: 3 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRESCIS*LFIGLT
Trigger: TGTGAGTCCTATAAAAAGCAAGGATATGCATGATTC...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR TCA 72 bp GAAATGAAAGACGGAGTTTCGGAAGATTTCCTTCTGTaGATAGCTGACAAGGATCACGCAGGCAAAAATGCT +
Preference number: 3 (lower is better)
Translates to: EMKDGVSEDFLL*IADKDHAGKNA
Trigger: AGCATTTTTGCCTGCGTGATCCTTGTCAGCTATTCACAGAAGGAAATCTTCCGAAACTCCGTCTTTCATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR GCA 72 bp ACTGCCCAAGCCTGTGATTCTTCATTCCCTGAATCATaGATATCCTTGCTTTTTATAGGACTCACAGAAAAC +
Preference number: 3 (lower is better)
Translates to: TAQACDSSFPES*ISLLFIGLTEN
Trigger: GTTTTCTGTGAGTCCTATAAAAAGCAAGGATATGCATGATTCAGGGAATGAAGAATCACAGGCTTGGGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CCA 72 bp ATGGCACCTGCTTTGGATTCATTGATGACACCACAATaGGGTGAAGATCTACAGGGAATTTACAATTTTAGG +
Preference number: 3 (lower is better)
Translates to: MAPALDSLMTPQ*GEDLQGIYNFR
Trigger: CCTAAAATTGTAAATTCCCTGTAGATCTTCACCCCATTGTGGTGTCATCAATGAATCCAAAGCAGGTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR-3UTR CAA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCATTTCCATCTTCCTCTTaGTTATACACACAGAGACAC +
Preference number: 3 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSFPSSS*LYTQRH
Trigger: GTGTCTCTGTGTGTATAACAAAGAGGAAGATGGAAA...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCGTTCTACCCGGCTCTTaGAGCGGTGGTGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSVLPGS*SGGAGR
Trigger: CCGGCCGGCACCACCGCTGCAAGAGCCGGGTAGAAC...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAAGGTCCGGTCCACGGTaGGCGCCGTGTCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRRSGPR*APCRCP
Trigger: CGGGCAGCGACACGGCGCTCACCGTGGACCGGACCT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCCCTGCCCGAGGCATTTaGATCTGCAAGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSPARGI*ICKAGR
Trigger: CCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGG...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551457.1
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCACGGCGAGCTTGCCCTaGCTGTCCAGTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSTASLP*LSSVLA
Trigger: AGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGT...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCACTCACATGCCTTCCTaGCTGCAGCAGATGGCGGGA +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSTHMPS*LQQMAG
Trigger: TCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGT...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCTCTGCCTCCCTGCCTTaGACCTGGCCTCCTTATCTG +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSSASLP*TWPPYL
Trigger: CAGATAAGGAGGCCAGGTGCAAGGCAGGGAGGCAGA...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCCGGCCGAGCCTGACGTaGCACTCGAACATTCATCAT +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSRPSLT*HSNIHH
Trigger: ATGATGAATGTTCGAGTGGCACGTCAGGCTCGGCCG...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCTTGATACGTCCCGCCTaGTGCTTGTCTGCGTTGTTC +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSLIRPA*CLSALF
Trigger: GAACAACGCAGACAAGCAGCAGGCGGGACGTATCAA...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCCTGGCATGCCCGATTTaGTGCTCTCCATGCAATGGG +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSLACPI*CSPCNG
Trigger: CCCATTGCATGGAGAGCAGCAAATCGGGCATGCCAG...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCCCTGGCTGTCCAGTGTaGTGGCTCCACCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAPGCPV*WLHQPQ
Trigger: TTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGG...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCGGATCACGGCGAGCTTaGCCTGGCTGTCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAGSRRA*PGCPVC
Trigger: GCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCC...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCTTCACGGTGTCTGTCTaGAGAGCTTGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSFTVSV*RACCSC
Trigger: GCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAA...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAACGGCGAGCTTGCCCTaGCTGTCCAGTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRTASLP*LSSVLA
Trigger: AGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCGCTTGCTGCTCTTGCTaGTGGAGCTCCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSACCSC*WSSSLE
Trigger: TTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGC...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCCTAGAGGCTCCATTCTaGTCGATCTCTCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSLEAPF*SISLSF
Trigger: AAAGCTCAGAGAGATCGAGCAGAATGGAGCCTCTAG...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCAAAGCAAGCTTGAGCTaGCTAAGTCCCGCTCACACA +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSKASLS*LSPAHT
Trigger: TGTGTGAGCGGGACTTAGGCAGCTCAAGCTTGCTTT...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGATTCTCTCTGCCTCCCTaGCTTGCACCTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRFSLPP*LAPGLL
Trigger: AAGGAGGCCAGGTGCAAGGCAGGGAGGCAGAGAGAA...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATCGGCTCTTGCAGCGGTaGTGCCGGCCGGGGTACGAG +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDRLLQR*CRPGYE
Trigger: CTCGTACCCCGGCCGGCACCACCGCTGCAAGAGCCG...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACACCGGGACATCAAAGTTaGGGTTGGTGTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITPGHQS*GWCLTP
Trigger: GGGGGTCAGACACCAACCTCAACTTTGATGTCCCGG...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAAGGTAGGAGAGCTCTaGAACAGATTCGTGTTAACG +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSKVGEL*NRFVLT
Trigger: CGTTAACACGAATCTGTTTCAGAGCTCTCCTACCTT...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACGGATCACGGCGAGCTTaGCCTGGCTGTCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHGSRRA*PGCPVC
Trigger: GCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCC...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAATGCTGGCCAGCTCCTaGTTCAGGTTGGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRMLASS*FRLAVS
Trigger: TGAGACAGCCAACCTGAAGCAGGAGCTGGCCAGCAT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGCTAGCTCACCCTCCTaGCCGAGGCATTTGAATCTG +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRASSPS*PRHLNL
Trigger: CAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGC...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAACTTTCCCGTCTTCTaGGGCTGCCGCGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWNFPVF*GCRAAS
Trigger: GCTCGCGGCGCGGCAGCCCCAGAAGACGGGAAAGTT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCAAGGTGCCAAGAATGTaGCAGCGACTCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSKVPRM*QRLFIM
Trigger: CATGATGAAGAGTCGCTGCCACATTCTTGGCACCTT...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTGCCTGCAGCAGATaGCGGGAGTGGTGGGACAAG +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTPACSR*REWWDK
Trigger: CTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGG...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGCCTGCCTGCAGCAGATaGCGGGAGTGGTGGGACAAG +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLPACSR*REWWDK
Trigger: CTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGG...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACACTGTCGGCCGAGCCTaGCGTGCCACTCGAACATTC +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYTVGRA*RATRTF
Trigger: GAATGTTCGAGTGGCACGTCAGGCTCGGCCGACAGT...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCAAGGTAGGAGAGCTCTaGAACAGATTCGTGTTAACG +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSKVGEL*NRFVLT
Trigger: CGTTAACACGAATCTGTTTCAGAGCTCTCCTACCTT...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACATGGACACTGAGTACATaGCGGGACCTATGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITWTLST*RDLWSP
Trigger: AGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCA...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCGACTGCTGTGGACACTaGGTACATGACGGGACCTAT +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRADCCGH*VHDGTY
Trigger: ATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTC...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAAGGGTCATACACGACTaGCTGCTGTGGACACTGAGT +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRRVIHD*LLWTLS
Trigger: ACTCAGTGTCCACAGCAGTCAGTCGTGTATGACCCT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCATATTGCACTTAATTTaGATCCAGGGGGACCTGATG +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSILHLI*IQGDLM
Trigger: CATCAGGTCCCCCTGGATTCAAATTAAGTGCAATAT...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAAAGGAGAGACAGCCATaGGATCAGGGTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITKERQP*DQGGTG
Trigger: ACCAGTCCCACCCTGATCTCATGGCTGTCTCTCCTT...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAGCACATTTGCTAGGCTaGGCACTGGAATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITAHLLG*ALEWCG
Trigger: CCCACACCATTCCAGTGCTCAGCCTAGCAAATGTGC...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCATACGTCCCGCCTGCTaGTTGTCTGCGTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAIRPAC*LSALFT
Trigger: AGTGAACAACGCAGACAAGCAGCAGGCGGGACGTAT...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAAAACTGCACCTTCAGTaGCTCGATGTCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRKLHLQ*LDVLSQ
Trigger: CTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTTT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCTATTCTCTCTTAAACTaGACCTTCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: CLPACSRWREWWDKGLNSYSLLN*TFSASM
Trigger: CATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATA...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCAGAGCTTGCTGCTCTTaGTGGTGGAGCTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRARACCS*WWSSSL
Trigger: TAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCT...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCGTCCGAAGTGGTGCTTaGAAAGATTCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSVRSGA*KDSQIP
Trigger: TGGTATCTGTGAATCTTTCCAAGCACCACTTCGGAC...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAGCAGCACTCAATCCCTaGTGTGTCCGAAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITAALNP*CVRSGA
Trigger: AGCACCACTTCGGACACACCAGGGATTGAGTGCTGC...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 72 bp AGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTaGGAAAGATTCACAGATACCAAGAGGGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SSTQSLVCPKWC*ERFTDTKRGPP
Trigger: GGGTGGGCCCCTCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATCCGGGACATCAAAGTTaGGGTTGGTGTCTGACCCCC +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNPGHQS*GWCLTP
Trigger: GGGGGTCAGACACCAACCTCAACTTTGATGTCCCGG...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGCACAGGTGGAGTAAGTaGGACCCCTGGCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWHRWSK*DPWHAR
Trigger: TCGGGCATGCCAGGGGTCTCACTTACTCCACCTGTG...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTACTGTCGGCCGAGCCTaGCGTGCCACTCGAACATTC +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPTVGRA*RATRTF
Trigger: GAATGTTCGAGTGGCACGTCAGGCTCGGCCGACAGT...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCAACAGCCTCACCGGCTaGAATGAAAGACGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRANSLTG*NERRSF
Trigger: GAAACTCCGTCTTTCATTTCAGCCGGTGAGGCTGTT...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCCCATCGCGCGATGTTTaGTCAATTTTTATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSPSRDV*SIFICS
Trigger: AGAGCAGATAAAAATTGAGCAAACATCGCGCGATGG...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGTGAGACCCCTGGCATaGCCGATTTGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYVRPLA*PICCSP
Trigger: TGGAGAGCAGCAAATCGGGCATGCCAGGGGTCTCAC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAGTCTGCAGAGCTTGCTaGTCTTGCTGGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTVCRAC*SCWWSS
Trigger: GGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGAC...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGTCTGCAGAGCTTGCTaGTCTTGCTGGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLVCRAC*SCWWSS
Trigger: GGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGAC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAGTCCTCGTTTCCTCATaGTTTCAGCGTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITVLVSS*FQRSDT
Trigger: GGTGTCGGAACGCTGAAAGCATGAGGAAACGAGGAC...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACACTCACATGCCTTCCTaGCTGCAGCAGATGGCGGGA +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHTHMPS*LQQMAG
Trigger: TCCCGCCATCTGCTGCAGGCAGGAAGGCATGTGAGT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGTTCTCTCTGCCTCCCTaGCTTGCACCTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKFSLPP*LAPGLL
Trigger: AAGGAGGCCAGGTGCAAGGCAGGGAGGCAGAGAGAA...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCGGGGACGGAGTGTGCTaGTTTCCATTCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAGDGVC*FPFSSL
Trigger: TAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCC...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACCCAGCCCCAAACGACTaGTTTCCGTTACTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHPAPND*FPLLSA
Trigger: GGCCGACAGTAACGGAAACCAGTCGTTTGGGGCTGG...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGCCAGCCCCAAACGACTaGTTTCCGTTACTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLPAPND*FPLLSA
Trigger: GGCCGACAGTAACGGAAACCAGTCGTTTGGGGCTGG...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAAGCGACTCTTCATCATaGGTGAGACGAACTTCGCGA +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRSDSSS*VRRTSR
Trigger: TCGCGAAGTTCGTCTCACCCATGATGAAGAGTCGCT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAGAGGTTTACCACGCTaGGCTGGTCAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWRGLPR*AGQVGR
Trigger: CCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAGCACACTCTGAAGGCTaGGCATTTGCTAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITAHSEG*AFASQL
Trigger: CAACTGGCTAGCAAATGCCCAGCCTTCAGAGTGTGC...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGTGGACACTGAGTACATaGCGGGACCTATGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKWTLST*RDLWSP
Trigger: AGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCA...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGAAGGAGAGACAGCCATaGGATCAGGGTGGGACTGGT +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLKERQP*DQGGTG
Trigger: ACCAGTCCCACCCTGATCTCATGGCTGTCTCTCCTT...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAACCCAGGCCCCAGCTTaGTTTAGGAGTGTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITTQAPA*FRSVSY
Trigger: GTAACTTACACTCCTAAATCAAGCTGGGGCCTGGGT...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATGCACATTTGCTAGGCTaGGCACTGGAATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNAHLLG*ALEWCG
Trigger: CCCACACCATTCCAGTGCTCAGCCTAGCAAATGTGC...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGTGAGACCCCTGGCATaGCCGATTTGCTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPVRPLA*PICCSP
Trigger: TGGAGAGCAGCAAATCGGGCATGCCAGGGGTCTCAC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATCGGCCGAGCCTGACGTaGCACTCGAACATTCATCAT +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNRPSLT*HSNIHH
Trigger: ATGATGAATGTTCGAGTGGCACGTCAGGCTCGGCCG...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACTCTGTCTGCAGAGCTTaGTGCTCTTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHSVCRA*CSCWWS
Trigger: GCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGA...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGCACAACATTCTCTCTaGCTCCCTGCCTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYAQHSL*LPALHL
Trigger: CAGGTGCAAGGCAGGGAGGCAGAGAGAATGTTGTGC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAGCACAACATTCTCTCTaGCTCCCTGCCTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTAQHSL*LPALHL
Trigger: CAGGTGCAAGGCAGGGAGGCAGAGAGAATGTTGTGC...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTTGCTCGGGATCACCCTaGGAGCCGCGGGCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGCSGSP*EPRARG
Trigger: CCCCCTCGCCCGCGGCTCCCAGGGTGATCCCGAGCA...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACATGCTGCTCTTGCTGGTaGAGCTCCAGCTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITCCSCW*SSSLEM
Trigger: CATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCA...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAAGCGACTCTTCATCATaGGTGAGACGAACTTCGCGA +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITSDSSS*VRRTSR
Trigger: TCGCGAAGTTCGTCTCACCCATGATGAAGAGTCGCT...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGGCTGGGCTGGTCAGGTaGGCAGGAAATCGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWAGLVR*AGNRSD
Trigger: ATCAGACCGATTTCCTGCCCACCTGACCAGCCCAGC...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAAGATGGCGGGAGTGGTaGGACAAGGGGCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRRWREW*DKGLNS
Trigger: GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCT...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATAAGCCTACGTCTTCTTaGACCCTCCCAGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNKPTSS*TLPEPF
Trigger: GAAGGGCTCTGGGAGGGTCCAAGAAGACGTAGGCTT...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGACTCTACTTCTGTCACTaGGGAGAAGATACACGGATC +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRLYFCH*GEDTRI
Trigger: GATCCGTGTATCTTCTCCCCAGTGACAGAAGTAGAG...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGACTGCTGTGGACACTaGGTACATGACGGGACCTAT +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYDCCGH*VHDGTY
Trigger: ATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAGGGTCATACACGACTaGCTGCTGTGGACACTGAGT +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTRVIHD*LLWTLS
Trigger: ACTCAGTGTCCACAGCAGTCAGTCGTGTATGACCCT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACTTGATACGTCCCGCCTaGTGCTTGTCTGCGTTGTTC +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHLIRPA*CLSALF
Trigger: GAACAACGCAGACAAGCAGCAGGCGGGACGTATCAA...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACACAATGTTGTCGGCGCTaGCAAACTTATTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITQCCRR*QTYSGS
Trigger: TGATCCGGAATAAGTTTGGCAGCGCCGACAACATTG...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTCCTGGCTGTCCAGTGTaGTGGCTCCACCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLPGCPV*WLHQPQ
Trigger: TTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGG...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACAAACTGCACCTTCAGTaGCTCGATGTCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHKLHLQ*LDVLSQ
Trigger: CTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTTT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGTCTGTCTGCAGAGCTTaGTGCTCTTGCTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWSVCRA*CSCWWS
Trigger: GCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGA...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCACGGTGTCTGTCTaGAGAGCTTGCTGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYFTVSV*RACCSC
Trigger: GCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAA...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACGGCAAAGAAGGTaGCAAGAATGTGGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLSRQRR*QECGSD
Trigger: GTCGCTGCCACATTCTTGGCACCTTCTTTGCCGTGA...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGTCCTCGTTTCCTCATaGTTTCAGCGTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYVLVSS*FQRSDT
Trigger: GGTGTCGGAACGCTGAAAGCATGAGGAAACGAGGAC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATGCTTGCTGCTCTTGCTaGTGGAGCTCCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNACCSC*WSSSLE
Trigger: TTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGC...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACATTTGGAAATGTCCTTTaGGCTCCTAGAGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITFGNVL*APRGSI
Trigger: AATGGAGCCTCTAGGAGCTCAAAGGACATTTCCAAA...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATTTGGCTGTCTCATGCTaGTGCAGGTCCGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDLAVSC*CRSVRS
Trigger: TGACCTGACGGACCTGCATCAGCATGAGACAGCCAA...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGAGGCCAGGATCACGTTaGTGCACCTCCCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSRPGSR*CTSPGE
Trigger: TTCTCCTGGGGAGGTGCATCAACGTGATCCTGGCCT...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAACTCTTCATCATGGGTaGGACGAACTTCGCGATGGT +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTTLHHG*DELRDG
Trigger: ACCATCGCGAAGTTCGTCTCACCCATGATGAAGAGT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAAAACTTGAAAGAACTTaGAGGCAGGAACCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITKLERT*RQEPVA
Trigger: AGCCACTGGTTCCTGCCTTCAAGTTCTTTCAAGTTT...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGATTTCCTTCTGTaGATAGCTGACAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWREDFLL*IADKDH
Trigger: GTGATCCTTGTCAGCTATTCACAGAAGGAAATCTTC...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAGCGAGCCACCGGCTGTaGTCGGGATCACCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSASHRL*SGSPWE
Trigger: CTCCCAGGGTGATCCCGAGCACAGCCGGTGGCTCGC...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACATGTGGAAGTCCAGGATaGCATCCGGGACATCAAAGT +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTCGSPG*HPGHQS
Trigger: ACTTTGATGTCCCGGATGGCATCCTGGACTTCCACA...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGACTGGCATGCCCGATTTaGTGCTCTCCATGCAATGGG +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRLACPI*CSPCNG
Trigger: CCCATTGCATGGAGAGCAGCAAATCGGGCATGCCAG...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAGAGCTTGCTGCTCTTaGTGGTGGAGCTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWRACCS*WWSSSL
Trigger: TAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAAAGCAAGCTTGAGCTaGCTAAGTCCCGCTCACACA +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTKASLS*LSPAHT
Trigger: TGTGTGAGCGGGACTTAGGCAGCTCAAGCTTGCTTT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGTCTGCCTCCCTGCCTTaGACCTGGCCTCCTTATCTG +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSSASLP*TWPPYL
Trigger: CAGATAAGGAGGCCAGGTGCAAGGCAGGGAGGCAGA...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGGGGACGGAGTGTGCTaGTTTCCATTCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLGDGVC*FPFSSL
Trigger: TAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGTGAGTTTGACCTTGTaGAAGTCCAGGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLVSLTL*KSRMPS
Trigger: GGATGGCATCCTGGACTTCCACAAGGTCAAACTCAC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTGCTGCTCTTGCTGGTaGAGCTCCAGCTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLCCSCW*SSSLEM
Trigger: CATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCA...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGATTTACCACGCTGGGCTaGTCAGGTGGGCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRFTTLG*SGGQEI
Trigger: GATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAA...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACAATGTTAAGAGACAGGTaGCAACCTTGGCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITMLRDR*QPWLKH
Trigger: GTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACAT...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACATCTCTGAGCTTTCGATaGTACTGCTCTAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITSLSFR*YCSNFF
Trigger: GAAGAAGTTAGAGCAGTATCATCGAAAGCTCAGAGA...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATTCTGCTCGATCTCTCTaGGCTTTCGATGATACTGCT +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNSARSL*AFDDTA
Trigger: AGCAGTATCATCGAAAGCTCAGAGAGATCGAGCAGA...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAATGTCCTCAGCCAGCTaGGCTTGGGTATCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRMSSAS*AWVSLI
Trigger: GATCAAGGATACCCAAGCTCAGCTGGCTGAGGACAT...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTACGAAGTACAAGGACTaGGTTGGCAACTGCTACGGA +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPTKYKD*VGNCYG
Trigger: TCCGTAGCAGTTGCCAACTCAGTCCTTGTACTTCGT...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACACAACAGCAGTTTCCATaGACATTGTTTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITQQQFP*TLFPSS
Trigger: GGAAGATGGAAACAATGTTCATGGAAACTGCTGTTG...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGAGAATCCAGGGGGACCTaGTGTCTCCTGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRESRGT*CLLEEN
Trigger: GTTTTCTTCCAGGAGACATCAGGTCCCCCTGGATTC...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACATCTGTCTCCCAGACTTaGAAGATCAGTGTATACACA +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITSVSQT*KISVYT
Trigger: TGTGTATACACTGATCTTTCAAGTCTGGGAGACAGA...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTCCTTCTGTGAATAGCTaGCAAGGATCACGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPPSVNS*QGSRRQ
Trigger: TTGCCTGCGTGATCCTTGTCAGCTATTCACAGAAGG...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATCCTCACCGGCTGAAATaGAAGACGGAGTTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDPHRLK*KTEFRK
Trigger: CTTCCGAAACTCCGTCTTTCATTTCAGCCGGTGAGG...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAAGGTATTCATGTCATaGCGTTCTACCAAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTKVFMS*RSTKGH
Trigger: GTGGCCCTTGGTAGAACGTCATGACATGAATACCTT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551457.1
CDS-3UTR GCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACTTGCTTCAGGCTGTCTaGAGTGAGTTTGACCTTGTG +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHLLQAV*SEFDLV
Trigger: CACAAGGTCAAACTCACTGCAGACAGCCTGAAGCAA...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGCTAGAGGCTCCATTCTaGTCGATCTCTCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLLEAPF*SISLSF
Trigger: AAAGCTCAGAGAGATCGAGCAGAATGGAGCCTCTAG...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTGTGAGTTTGACCTTGTaGAAGTCCAGGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPVSLTL*KSRMPS
Trigger: GGATGGCATCCTGGACTTCCACAAGGTCAAACTCAC...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGGTCAGGTCATGCAGCTaGTCCTCCAGTCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWVRSCS*SSSRSY
Trigger: GTATGAGCGACTGGAGGACCAGCTGCATGACCTGAC...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACAAGGTGCCAAGAATGTaGCAGCGACTCTTCATCATG +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHKVPRM*QRLFIM
Trigger: CATGATGAAGAGTCGCTGCCACATTCTTGGCACCTT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTGGACCTATGGTCCCCTaGAGAGAAGCAGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLGPMVP*REAGWI
Trigger: GATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCC...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATGCACACTCTGAAGGCTaGGCATTTGCTAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDAHSEG*AFASQL
Trigger: CAACTGGCTAGCAAATGCCCAGCCTTCAGAGTGTGC...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAAGGAAAGTATCATCTaGGCTGAAGGCGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTKESII*AEGGEW
Trigger: CCATTCACCGCCTTCAGCCCAGATGATACTTTCCTT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATCTGGTGTGTCCGAAGTaGTGCTTGGAAAGATTCACA +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNLVCPK*CLERFT
Trigger: TGTGAATCTTTCCAAGCACCACTTCGGACACACCAG...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 72 bp TGCCTTGCACCTGGCCTCCTTATCTGTCTCCCAGACTaGAAAGATCAGTGTATACACATCAACGCGGTAGAC +
Preference number: 4 (lower is better)
Translates to: CLAPGLLICLPD*KDQCIHINAVD
Trigger: GTCTACCGCGTTGATGTGTATACACTGATCTTTCAAGTCTGGGAGACAGATAAGGAGGCCAGGTGCAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTTGGAAATGTCCTTTaGGCTCCTAGAGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYFGNVL*APRGSI
Trigger: AATGGAGCCTCTAGGAGCTCAAAGGACATTTCCAAA...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGAGCTTGGGTATCCTTaGTCTCCCTCAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSELGYP*SPSVPP
Trigger: TGGAGGAACTGAGGGAGATCAAGGATACCCAAGCTC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGATGTCCTCAGCCAGCTaGGCTTGGGTATCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWMSSAS*AWVSLI
Trigger: GATCAAGGATACCCAAGCTCAGCTGGCTGAGGACAT...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAACTCTTCATCATGGGTaGGACGAACTTCGCGATGGT +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRTLHHG*DELRDG
Trigger: ACCATCGCGAAGTTCGTCTCACCCATGATGAAGAGT...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGAAACTTGAAAGAACTTaGAGGCAGGAACCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKKLERT*RQEPVA
Trigger: AGCCACTGGTTCCTGCCTTCAAGTTCTTTCAAGTTT...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGATTGGTTGCCTGGGTATaGGAAGGTGAAAGCCCCATT +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRLVAWV*EGESPI
Trigger: AATGGGGCTTTCACCTTCTCATACCCAGGCAACCAA...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACACACCTCAGTGCACTTaGACTTTAGAGGCTATGGTT +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHTPQCT*TLEAMV
Trigger: AACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCAAGGGAGCTCTTCTCTaGATCCAAAATACTTTATCA +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAKGALL*IQNTLS
Trigger: TGATAAAGTATTTTGGATTCAGAGAAGAGCTCCCTT...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGCACGGATCACAGGTCTaGGAAGTGTGCATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWHGSQV*EVCIKA
Trigger: TGCTTTAATGCACACTTCTCAGACCTGTGATCCGTG...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTCACGGATCACAGGTCTaGGAAGTGTGCATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPHGSQV*EVCIKA
Trigger: TGCTTTAATGCACACTTCTCAGACCTGTGATCCGTG...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACATATGCCAGGTAGGTTaGGCCTATCCAAGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHICQVG*AYPSEN
Trigger: GTTTTCACTTGGATAGGCTCAACCTACCTGGCATAT...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTATGCTGGCCAGCTCCTaGTTCAGGTTGGCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLMLASS*FRLAVS
Trigger: TGAGACAGCCAACCTGAAGCAGGAGCTGGCCAGCAT...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTTTCCTGAGTAAGCTTTaGAGTCCCTCACAGACCTGT +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPFLSKL*SPSQTC
Trigger: ACAGGTCTGTGAGGGACTGCAAAGCTTACTCAGGAA...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAGTGTGTCCGAAGTGGTaGTTGGAAAGATTCACAGAT +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTVCPKW*LERFTD
Trigger: ATCTGTGAATCTTTCCAAGCACCACTTCGGACACAC...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGCTGCTCTCCATGCAATaGGGGGCAGTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWLLSMQ*GAVRDF
Trigger: GAAATCTCGAACTGCCCCCCATTGCATGGAGAGCAG...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAGACGAACTTCGCGATaGTGGACACACACACTAAGA +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWRRTSR*WTHTLR
Trigger: TCTTAGTGTGTGTGTCCACCATCGCGAAGTTCGTCT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCATGGCACACAGGATATaGTCCCAGTTTTTACAAAAT +
Preference number: 4 (lower is better)
Translates to: GVGWCENEAYVFLDPPRAMAHRI*SQFLQN
Trigger: ATTTTGTAAAAACTGGGACCATATCCTGTGTGCCAT...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAATGGCACACAGGATATaGTCCCAGTTTTTACAAAAT +
Preference number: 4 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRMAHRI*SQFLQN
Trigger: ATTTTGTAAAAACTGGGACCATATCCTGTGTGCCAT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGAAGGCAGGAACCAGTaGCTTCATCTTGGTATTATC +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLEGRNQ*LHLGII
Trigger: GATAATACCAAGATGAAGCCACTGGTTCCTGCCTTC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGAAGGCAGGAACCAGTaGCTTCATCTTGGTATTATC +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYEGRNQ*LHLGII
Trigger: GATAATACCAAGATGAAGCCACTGGTTCCTGCCTTC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAATGTTAAGAGACAGGTaGCAACCTTGGCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTMLRDR*QPWLKH
Trigger: GTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACAT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAGGAAAGTATCATCTaGGCTGAAGGCGGTGAATGG +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWKESII*AEGGEW
Trigger: CCATTCACCGCCTTCAGCCCAGATGATACTTTCCTT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGGTCCGAAGTGGTGCTTaGAAAGATTCACAGATACCA +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLVRSGA*KDSQIP
Trigger: TGGTATCTGTGAATCTTTCCAAGCACCACTTCGGAC...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGTGGAATGGTGTGGGCTaGTGTGAAAATGAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWWNGVG*CENEAY
Trigger: GTAGGCTTCATTTTCACACCAGCCCACACCATTCCA...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGCTCTACTTCTGTCACTaGGGAGAAGATACACGGATC +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWLYFCH*GEDTRI
Trigger: GATCCGTGTATCTTCTCCCCAGTGACAGAAGTAGAG...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGGGGGGTGGGGTGTTCTaGTTTAATCATATTCAGAGT +
Preference number: 4 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKGGGVF*FNHIQS
Trigger: ACTCTGAATATGATTAAACCAGAACACCCCACCCCC...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261226.9
3UTR CAA 72 bp TCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTaGAACTTTAGAGGCTATGGTTCGGTTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSCFQRSDTSVH*NFRGYGSVVLQ
Trigger: TTGAAGGACAACCGAACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAAAGGTATTCATGTCATaGCGTTCTACCCGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRKVFMS*RSTRLL
Trigger: CAAGAGCCGGGTAGAACGTCATGACATGAATACCTT...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAGGCGATGGAGTGAGCTaGTTTCTGATTCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRGDGVS*FLILLL
Trigger: GAGAAGAAGAATCAGAAATCAGCTCACTCCATCGCC...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGATCTGCTCGATCTCTCTaGGCTTTCGATGATACTGCT +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRSARSL*AFDDTA
Trigger: AGCAGTATCATCGAAAGCTCAGAGAGATCGAGCAGA...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCACACAGGTGGAGTAAGTaGGACCCCTGGCATGCCCGA +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSHRWSK*DPWHAR
Trigger: TCGGGCATGCCAGGGGTCTCACTTACTCCACCTGTG...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCAACAGCAGTTTCCATaGACATTGTTTCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKQQQFP*TLFPSS
Trigger: GGAAGATGGAAACAATGTTCATGGAAACTGCTGTTG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATCACATGAATGCTAATTaGCAGAGAAGGATAACAGCC +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNHMNAN*QRRITA
Trigger: GGCTGTTATCCTTCTCTGTCAATTAGCATTCATGTG...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACACAGAGCACGTTTTGTTaGAATATTTCTCTTAGGACA +
Preference number: 4 (lower is better)
Translates to: TEYMTGPMVPWREAGWITQSTFC*NISLRT
Trigger: TGTCCTAAGAGAAATATTTCAACAAAACGTGCTCTG...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGGACACCACAATGGGGTaGAGATCTACAGGGAATTTA +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWDTTMG*RSTGNL
Trigger: TAAATTCCCTGTAGATCTTCACCCCATTGTGGTGTC...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTATTCTCTCTTAAACTaGACCTTCAGTGCCTCGATG +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYYSLLN*TFSASM
Trigger: CATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATA...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGATTCCTGAGTAAGCTTTaGAGTCCCTCACAGACCTGT +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRFLSKL*SPSQTC
Trigger: ACAGGTCTGTGAGGGACTGCAAAGCTTACTCAGGAA...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTCTGCTCTCCATGCAATaGGGGGCAGTTCGAGATTTC +
Preference number: 4 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLLLSMQ*GAVRDF
Trigger: GAAATCTCGAACTGCCCCCCATTGCATGGAGAGCAG...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTATTCCGGATCAGGTTaGCAAACTCTCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYYSGSG*QTLWTY
Trigger: ATAAGTCCAGAGAGTTTGCCAACCTGATCCGGAATA...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTATTCCGGATCAGGTTaGCAAACTCTCTGGACTTAT +
Preference number: 4 (lower is better)
Translates to: LQTRGDGVCCFPFSSLLLYSGSG*QTLWTY
Trigger: ATAAGTCCAGAGAGTTTGCCAACCTGATCCGGAATA...CAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAGATTCCAAGGCTTCCTaGATGTCCCGCGAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSDSKAS*MSRERS
Trigger: CGAGCGCTCGCGGGACATCCAGGAAGCCTTGGAATC...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTGATTCCAAGGCTTCCTaGATGTCCCGCGAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGDSKAS*MSRERS
Trigger: CGAGCGCTCGCGGGACATCCAGGAAGCCTTGGAATC...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp AGGTCTCAATATACAGAGGTTTACCACGCTGGGCTGGTCAGGTGGGCAGGAAATTTATCATCCTTTCTATaGCACACAGGATATGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSQYTEVYHAGLVRWAGNLSSFL*HTGYGP
Trigger: GGGACCATATCCTGTGTGCCATAGAAAGGATGATAA...ATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCTGTATATTGAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACATTATCATCCTTTCTATaGCACACAGGATATGGTCCC +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTLSSFL*HTGYGP
Trigger: GGGACCATATCCTGTGTGCCATAGAAAGGATGATAA...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTAGAGGTTTACCACGCTaGGCTGGTCAGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGRGLPR*AGQVGR
Trigger: CCTGCCCACCTGACCAGCCCAGCGTGGTAAACCTCT...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATTGGAATGGTGTGGGCTaGTGTGAAAATGAAGCCTAC +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDWNGVG*CENEAY
Trigger: GTAGGCTTCATTTTCACACCAGCCCACACCATTCCA...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTTTGATGACACCACAATaGGGTGAAGATCTACAGGGA +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPLMTPQ*GEDLQG
Trigger: TCCCTGTAGATCTTCACCCCATTGTGGTGTCATCAA...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATAAGGAATTTTTCAAGTaGGCAATGTTGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDKEFFK*AMLSAL
Trigger: CAGCGCCGACAACATTGCTCACTTGAAAAATTCCTT...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACTCCTCTTGCAGGGTCTaGGAAATAAAACCATATTCT +
Preference number: 4 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHSSCRV*EIKPYS
Trigger: AGAATATGGTTTTATTTCTCAGACCCTGCAAGAGGA...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAAGGCCAGGATCACGTTaGTGCACCTCCCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSRPGSR*CTSPGE
Trigger: TTCTCCTGGGGAGGTGCATCAACGTGATCCTGGCCT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGATGTGAAGCTCAATTCTaGCAGAGACTTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRCEAQF*QRLRRE
Trigger: CTCTCTCCTAAGTCTCTGTCAGAATTGAGCTTCACA...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGACATTTGCTAGCCAGTTaGGACAAAATCAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRHLLAS*DKIRCW
Trigger: CCAACACCTGATTTTGTCTCAACTGGCTAGCAAATG...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGATGAATCACATAAAGTaGATCATATCCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWMNHIK*IISSRG
Trigger: CCCCCTGGAGGATATGATTCACTTTATGTGATTCAT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGAGACGAACTTCGCGATaGTGGACACACACACTAAGA +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSRRTSR*WTHTLR
Trigger: TCTTAGTGTGTGTGTCCACCATCGCGAAGTTCGTCT...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTGCTGGGCTGGTCAGGTaGGCAGGAAATCGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGAGLVR*AGNRSD
Trigger: ATCAGACCGATTTCCTGCCCACCTGACCAGCCCAGC...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTGGACCTATGGTCCCCTaGAGAGAAGCAGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGGPMVP*REAGWI
Trigger: GATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCC...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATGACAAAATCAGGTGTTaGTTGCCTGGGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDDKIRC*LPGYEK
Trigger: CTTCTCATACCCAGGCAACCAACACCTGATTTTGTC...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGAGACAAAATCAGGTGTTaGTTGCCTGGGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRDKIRC*LPGYEK
Trigger: CTTCTCATACCCAGGCAACCAACACCTGATTTTGTC...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGGACCTGATGTCTCCTaGAAGAAAACGTACACTCAC +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSGPDVS*KKTYTH
Trigger: GTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTCC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGACTCTCTGGACTTATTaGAAACGAACACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWTLWTY*KRTQVE
Trigger: CTCCACCTGTGTTCGTTTTCAATAAGTCCAGAGAGT...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGAAGGAATTTTTCAAGTaGGCAATGTTGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSKEFFK*AMLSAL
Trigger: CAGCGCCGACAACATTGCTCACTTGAAAAATTCCTT...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTTTGGCTGTCTCATGCTaGTGCAGGTCCGTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGLAVSC*CRSVRS
Trigger: TGACCTGACGGACCTGCATCAGCATGAGACAGCCAA...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGCAATCTTCATCCAGGTaGACTGCTCCCACTAATCTA +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSQSSSR*TAPTNL
Trigger: TAGATTAGTGGGAGCAGTTCACCTGGATGAAGATTG...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATATATTGCACTTAATTTaGATCCAGGGGGACCTGATG +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDILHLI*IQGDLM
Trigger: CATCAGGTCCCCCTGGATTCAAATTAAGTGCAATAT...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAAGGGAGCTCTTCTCTaGATCCAAAATACTTTATCA +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTKGALL*IQNTLS
Trigger: TGATAAAGTATTTTGGATTCAGAGAAGAGCTCCCTT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATTCTGTCTCCCAGACTTaGAAGATCAGTGTATACACA +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDSVSQT*KISVYT
Trigger: TGTGTATACACTGATCTTTCAAGTCTGGGAGACAGA...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGTTGAGCCTATCCAAGTaGAAACAAGGTTATTTGACA +
Preference number: 4 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKLSLSK*KQGYLT
Trigger: TGTCAAATAACCTTGTTTTCACTTGGATAGGCTCAA...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTCTTCATATAAGCCCTaGATTTTAAGTGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYSSYKP*ILSGAI
Trigger: AATGGCACCACTTAAAATTCAGGGCTTATATGAAGA...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGACCATCGCGCGATGTTTaGTCAATTTTTATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRPSRDV*SIFICS
Trigger: AGAGCAGATAAAAATTGAGCAAACATCGCGCGATGG...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTCAATGTTGTCGGCGCTaGCAAACTTATTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLQCCRR*QTYSGS
Trigger: TGATCCGGAATAAGTTTGGCAGCGCCGACAACATTG...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAACATTCATCATCACTaGCATACTTGGGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTNIHHH*HTWVCS
Trigger: TGAACAAACCCAAGTATGGCAGTGATGATGAATGTT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTCAGGATCACCAATTATaGCAAGGTCTCAATATACAG +
Preference number: 4 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPQDHQL*QGLNIQ
Trigger: CTGTATATTGAGACCTTGGCATAATTGGTGATCCTG...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGTCACGCAGGCAAAAATaGTACCGTTCCAAGCTACAA +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWSRRQK*YRSKLQ
Trigger: TTGTAGCTTGGAACGGTAGCATTTTTGCCTGCGTGA...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGTTCGAGATTTCACGTaGGCATCTTTCAAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSVRDFT*ASFKER
Trigger: TCGCTCTTTGAAAGATGCCCACGTGAAATCTCGAAC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGGTTCGAGATTTCACGTaGGCATCTTTCAAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWVRDFT*ASFKER
Trigger: TCGCTCTTTGAAAGATGCCCACGTGAAATCTCGAAC...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAGTCAGGTCATGCAGCTaGTCCTCCAGTCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSVRSCS*SSSRSY
Trigger: GTATGAGCGACTGGAGGACCAGCTGCATGACCTGAC...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTTTTACCACGCTGGGCTaGTCAGGTGGGCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGFTTLG*SGGQEI
Trigger: GATTTCCTGCCCACCTGACCAGCCCAGCGTGGTAAA...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTGCAGCACTCAATCCCTaGTGTGTCCGAAGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGAALNP*CVRSGA
Trigger: AGCACCACTTCGGACACACCAGGGATTGAGTGCTGC...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAAAGCCTACGTCTTCTTaGACCCTCCCAGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSKPTSS*TLPEPF
Trigger: GAAGGGCTCTGGGAGGGTCCAAGAAGACGTAGGCTT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGCCCTGAATTTTAAGTaGTGCCATTTCTTCCTACCC +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSALNFK*CHFFLP
Trigger: GGGTAGGAAGAAATGGCACCACTTAAAATTCAGGGC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAGAGCTTGGGTATCCTTaGTCTCCCTCAGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSELGYP*SPSVPP
Trigger: TGGAGGAACTGAGGGAGATCAAGGATACCCAAGCTC...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGAAATCTCCTTACACATTaGAGAGAACAAACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRNLLTH*REQTVG
Trigger: TCCCACTGTTTGTTCTCTTCAATGTGTAAGGAGATT...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTATACGTCCCGCCTGCTaGTTGTCTGCGTTGTTCACT +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGIRPAC*LSALFT
Trigger: AGTGAACAACGCAGACAAGCAGCAGGCGGGACGTAT...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATACAAAAGTAATTAGTTaGCTGAGGGAAGCTAGTTCC +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDTKVIS*LREASS
Trigger: GGAACTAGCTTCCCTCAGGCAACTAATTACTTTTGT...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTTTGGTTGCCTGGGTATaGGAAGGTGAAAGCCCCATT +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGLVAWV*EGESPI
Trigger: AATGGGGCTTTCACCTTCTCATACCCAGGCAACCAA...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTACCCAGGCCCCAGCTTaGTTTAGGAGTGTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGTQAPA*FRSVSY
Trigger: GTAACTTACACTCCTAAATCAAGCTGGGGCCTGGGT...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCATGTGGAAGTCCAGGATaGCATCCGGGACATCAAAGT +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSCGSPG*HPGHQS
Trigger: ACTTTGATGTCCCGGATGGCATCCTGGACTTCCACA...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATAACATTCATCATCACTaGCATACTTGGGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDNIHHH*HTWVCS
Trigger: TGAACAAACCCAAGTATGGCAGTGATGATGAATGTT...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGTTGAGCCTATCCAAGTaGAAACAAGGTTATTTGACA +
Preference number: 4 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWLSLSK*KQGYLT
Trigger: TGTCAAATAACCTTGTTTTCACTTGGATAGGCTCAA...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTAGAGCGAAAACCACATaGATGCTAATTGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLRAKTT*MLIDRE
Trigger: TTCTCTGTCAATTAGCATTCATGTGGTTTTCGCTCT...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR GCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGTGGACTTGTACTAAATaGTCAACGATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSWTCTK*STIPFS
Trigger: AGAGAATGGAATCGTTGAGCATTTAGTACAAGTCCA...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTGGACCTGATGTCTCCTaGAAGAAAACGTACACTCAC +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGGPDVS*KKTYTH
Trigger: GTGAGTGTACGTTTTCTTCCAGGAGACATCAGGTCC...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTCTGGTGTGTCCGAAGTaGTGCTTGGAAAGATTCACA +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGLVCPK*CLERFT
Trigger: TGTGAATCTTTCCAAGCACCACTTCGGACACACCAG...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CCA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGATATGCTAGAGAAATaGCAAGGCAATAAACACAGA +
Preference number: 4 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSDMLEK*QGNKHR
Trigger: TCTGTGTTTATTGCCTTGCCATTTCTCTAGCATATC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTACTCTCTGGACTTATTaGAAACGAACACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGTLWTY*KRTQVE
Trigger: CTCCACCTGTGTTCGTTTTCAATAAGTCCAGAGAGT...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCACATTTGCTAGCCAGTTaGGACAAAATCAGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSHLLAS*DKIRCW
Trigger: CCAACACCTGATTTTGTCTCAACTGGCTAGCAAATG...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAACACCTCAGTGCACTTaGACTTTAGAGGCTATGGTT +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSTPQCT*TLEAMV
Trigger: AACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTCAATCTTCATCCAGGTaGACTGCTCCCACTAATCTA +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGQSSSR*TAPTNL
Trigger: TAGATTAGTGGGAGCAGTTCACCTGGATGAAGATTG...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTATATGCCAGGTAGGTTaGGCCTATCCAAGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGICQVG*AYPSEN
Trigger: GTTTTCACTTGGATAGGCTCAACCTACCTGGCATAT...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTTCTCTGAGCTTTCGATaGTACTGCTCTAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGSLSFR*YCSNFF
Trigger: GAAGAAGTTAGAGCAGTATCATCGAAAGCTCAGAGA...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAATGAATCACATAAAGTaGATCATATCCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSMNHIK*IISSRG
Trigger: CCCCCTGGAGGATATGATTCACTTTATGTGATTCAT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 72 bp TCCCATTTAAAGTGTAACAAAACCCCTCAGGTAGACTaGTTGGATAACAGGTGTGTGATAAGATTTCCACGT +
Preference number: 4 (lower is better)
Translates to: SHLKCNKTPQVD*LDNRCVIRFPR
Trigger: ACGTGGAAATCTTATCACACACCTGTTATCCAACAAGTCTACCTGAGGGGTTTTGTTACACTTTAAATGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR TCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAAATCTCCTTACACATTaGAGAGAACAAACAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSNLLTH*REQTVG
Trigger: TCCCACTGTTTGTTCTCTTCAATGTGTAAGGAGATT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
3UTR CAA 72 bp CATTTAAAGTGTAACAAAACCCCTCAGGTAGACTTGTaGGATAACAGGTGTGTGATAAGATTTCCACGTTAC +
Preference number: 4 (lower is better)
Translates to: HLKCNKTPQVDL*DNRCVIRFPRY
Trigger: GTAACGTGGAAATCTTATCACACACCTGTTATCCAACAAGTCTACCTGAGGGGTTTTGTTACACTTTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR GCA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCATGGACTTGTACTAAATaGTCAACGATTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSWTCTK*STIPFS
Trigger: AGAGAATGGAATCGTTGAGCATTTAGTACAAGTCCA...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp GCTGCCCGGCATCTCCGCGCTCCGGCCGCGAACTTTCCCGTCTTCTaGGGCTGCCGCGCCGCGAGCCACCGGCTGTGCTCGGGATCACCC +
Preference number: 5 (lower is better)
Translates to: AARHLRAPAANFPVF*GCRAASHRLCSGSP
Trigger: GGGTGATCCCGAGCACAGCCGGTGGCTCGCGGCGCGGCAGCCCCAGAAGACGGGAAAGTTCGCGGCCGGAGCGCGGAGATGCCGGGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS GCA 90 bp CGGCATCTCCGCGCTCCGGCCGCGAACTTTCCCGTCTTCTGGGGCTaGCGCGCCGCGAGCCACCGGCTGTGCTCGGGATCACCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RHLRAPAANFPVFWG*RAASHRLCSGSPWE
Trigger: CTCCCAGGGTGATCCCGAGCACAGCCGGTGGCTCGCGGCGCGGCAGCCCCAGAAGACGGGAAAGTTCGCGGCCGGAGCGCGGAGATGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CAA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGGATCACGGCGAGCTaGCCCTGGCTGTCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CLPACSRWREWWDKGLNSRITAS*PWLSSV
Trigger: CACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCT...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp GTTCCTCCAGGATCACGGCGAGCTTGCCCTGGCTGTCCAGTGTGCTaGCTCCACCAGCCCCAAACGACTGGTTTCCGTTACTGTCGGCCG +
Preference number: 5 (lower is better)
Translates to: VPPGSRRACPGCPVC*LHQPQTTGFRYCRP
Trigger: CGGCCGACAGTAACGGAAACCAGTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCTGGAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCCGTCCCGCCTGCTGCTaGTCTGCGTTGTTCACTAGT +
Preference number: 5 (lower is better)
Translates to: CLPACSRWREWWDKGLNSRPACC*SALFTS
Trigger: ACTAGTGAACAACGCAGACAAGCAGCAGGCGGGACG...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCCCTGGCATGCCCGATTaGCTGCTCTCCATGCAATGG +
Preference number: 5 (lower is better)
Translates to: CLPACSRWREWWDKGLNSPGMPD*LLSMQW
Trigger: CCATTGCATGGAGAGCAGCAAATCGGGCATGCCAGG...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp TCAGTTCCTCCAGGATCACGGCGAGCTTGCCCTGGCTGTCCAGTGTaGTGGCTCCACCAGCCCCAAACGACTGGTTTCCGTTACTGTCGG +
Preference number: 5 (lower is better)
Translates to: SVPPGSRRACPGCPV*WLHQPQTTGFRYCR
Trigger: CCGACAGTAACGGAAACCAGTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCTGGAGGAACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp TTGCCCTGGCTGTCCAGTGTGCTGGCTCCACCAGCCCCAAACGACTaGTTTCCGTTACTGTCGGCCGAGCCTGACGTGCCACTCGAACAT +
Preference number: 5 (lower is better)
Translates to: LPWLSSVLAPPAPND*FPLLSAEPDVPLEH
Trigger: ATGTTCGAGTGGCACGTCAGGCTCGGCCGACAGTAACGGAAACCAGTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCTCCTGCCCGAGGCATTaGAATCTGCAAGGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSSCPRH*NLQGRQ
Trigger: CTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGA...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551457.1
CDS TCA 90 bp CCTTCAGTGCCTCGATGTCCTCAGCCAGCTGAGCTTGGGTATCCTTaGTCTCCCTCAGTTCCTCCAGGATCACGGCGAGCTTGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PSVPRCPQPAELGYP*SPSVPPGSRRACPG
Trigger: GCCAGGGCAAGCTCGCCGTGATCCTGGAGGAACTGAGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAGGACATCGAGGCACTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp TCCTTGATCTCCCTCAGTTCCTCCAGGATCACGGCGAGCTTGCCCTaGCTGTCCAGTGTGCTGGCTCCACCAGCCCCAAACGACTGGTTT +
Preference number: 5 (lower is better)
Translates to: SLISLSSSRITASLP*LSSVLAPPAPNDWF
Trigger: AAACCAGTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCTGGAGGAACTGAGGGAGATCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACCGTTCTACCCGGCTCTaGCAGCGGTGGTGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHRSTRL*QRWCRP
Trigger: CGGCCGGCACCACCGCTGCAAGAGCCGGGTAGAACG...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS GCA 90 bp AGCAAACCCAGGAGCAGAGCAGGATCGGCAGCTAGCTCACCCTCCTaGCCGAGGCATTTGAATCTGCAAGGCAGGCAGGCTAGATATTCC +
Preference number: 5 (lower is better)
Translates to: SKPRSRAGSAASSPS*PRHLNLQGRQARYS
Trigger: GGAATATCTAGCCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGCTGCCGATCCTGCTCTGCTCCTGGGTTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551457.1
ENST00000552239.1
CDS-3UTR CAA 90 bp TGCCTTCCTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCCCCATCGCGCGATGTTaGCTCAATTTTTATCTGCTC +
Preference number: 5 (lower is better)
Translates to: CLPACSRWREWWDKGLNSPIARC*LNFYLL
Trigger: GAGCAGATAAAAATTGAGCAAACATCGCGCGATGGG...GCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAGGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCACCCCTCAGGTAGACTaGTTGGATAACAGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSTPQVD*LDNRCV
Trigger: CACACACCTGTTATCCAACAAGTCTACCTGAGGGGT...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCCTACGTCTTCTaGGACCCTCCCAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWREAYVF*DPPRAL
Trigger: AAGGGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTC...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS TCA 90 bp GCAGAGCAGGATCGGCAGCTAGCTCACCCTCCTGCCCGAGGCATTTaGATCTGCAAGGCAGGCAGGCTAGATATTCCAAACAGCACCTAC +
Preference number: 5 (lower is better)
Translates to: AEQDRQLAHPPARGI*ICKAGRLDIPNSTY
Trigger: GTAGGTGCTGTTTGGAATATCTAGCCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGCTGCCGATCCTGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551457.1
ENST00000552239.1
CDS-3UTR CAA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACACAGAGCTTGCTGCTCTaGCTGGTGGAGCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TEYMTGPMVPWREAGWITQSLLL*LVELQL
Trigger: AAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTG...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGTGTGGGCTGGTGTGAAAATGAAGCCTACGTCTTCTTGGACCCTCCCAGAGCCCTGCCATACTTGGGTTaGTTCACGATGGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GVGWCENEAYVFLDPPRALPYLG*FTMVAL
Trigger: CAGCGCTACCATCGTGAACAAACCCAAGTATGGCAG...GGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTCATTTTCACACCAGCCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAGGATCACGGCGAGCTaGCCCTGGCTGTCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWRITAS*PWLSSV
Trigger: CACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp CCCAGGAGAACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTGCTaGTCTTGCTGGTGGAGCTCCAGCTTAGAAATGCGAGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PRRTLAFTVSVCRAC*SCWWSSSLEMRVWQ
Trigger: CTGCCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCTCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp CTCCCCAGGAGAACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTaGTGCTCTTGCTGGTGGAGCTCCAGCTTAGAAATGCGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LPRRTLAFTVSVCRA*CSCWWSSSLEMRVW
Trigger: CCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCTCCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp GTAAGTGAGACCCCTGGCATGCCCGATTTGCTGCTCTCCATGCAATaGGGGGCAGTTCGAGATTTCACGTGGGCATCTTTCAAAGAGCGA +
Preference number: 5 (lower is better)
Translates to: VSETPGMPDLLLSMQ*GAVRDFTWASFKER
Trigger: TCGCTCTTTGAAAGATGCCCACGTGAAATCTCGAACTGCCCCCCATTGCATGGAGAGCAGCAAATCGGGCATGCCAGGGGTCTCACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCGTCCCGCCTGCTGCTaGTCTGCGTTGTTCACTAGT +
Preference number: 5 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKRPACC*SALFTS
Trigger: ACTAGTGAACAACGCAGACAAGCAGCAGGCGGGACG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCAGAGCTTGCTGCTCTaGCTGGTGGAGCTCCAGCTT +
Preference number: 5 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKQSLLL*LVELQL
Trigger: AAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAGAAGCCTACGTCTTCTaGGACCCTCCCAGAGCCCTT +
Preference number: 5 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTEAYVF*DPPRAL
Trigger: AAGGGCTCTGGGAGGGTCCAAGAAGACGTAGGCTTC...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS TCA 90 bp TCTCTCTTAAACTGCACCTTCAGTGCCTCGATGTCCTCAGCCAGCTaGGCTTGGGTATCCTTGATCTCCCTCAGTTCCTCCAGGATCACG +
Preference number: 5 (lower is better)
Translates to: SLLNCTFSASMSSAS*AWVSLISLSSSRIT
Trigger: CGTGATCCTGGAGGAACTGAGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTTTAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTCCGGGACATCAAAGTaGAGGTTGGTGTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYSGTSK*RLVSDP
Trigger: GGGGTCAGACACCAACCTCAACTTTGATGTCCCGGA...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTCCTGGCATGCCCGATTaGCTGCTCTCCATGCAATGG +
Preference number: 5 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPPGMPD*LLSMQW
Trigger: CCATTGCATGGAGAGCAGCAAATCGGGCATGCCAGG...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCTCAGCCAGCTGAGCTaGGGTATCCTTGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKLSQLS*GILDLP
Trigger: AGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACACTCAGCCAGCTGAGCTaGGGTATCCTTGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTLSQLS*GILDLP
Trigger: AGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAG...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGACTAATCCCATGTTCATaGTCCAAACCCAGCAACGGA +
Preference number: 5 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRLIPCS*SKPSNG
Trigger: TCCGTTGCTGGGTTTGGACAATGAACATGGGATTAG...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS TCA 90 bp GGCAAACTCTCTGGACTTATTGAAAACGAACACAGGTGGAGTAAGTaGGACCCCTGGCATGCCCGATTTGCTGCTCTCCATGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: GKLSGLIENEHRWSK*DPWHARFAALHAMG
Trigger: CCCCATTGCATGGAGAGCAGCAAATCGGGCATGCCAGGGGTCTCACTTACTCCACCTGTGTTCGTTTTCAATAAGTCCAGAGAGTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp AGAACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTGCTGCTCTTaGTGGTGGAGCTCCAGCTTAGAAATGCGAGTCTGGCAGGATTCC +
Preference number: 5 (lower is better)
Translates to: RTLAFTVSVCRACCS*WWSSSLEMRVWQDS
Trigger: GGAATCCTGCCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp TTGATGCACCTCCCCAGGAGAACTTTAGCATTCACGGTGTCTGTCTaGAGAGCTTGCTGCTCTTGCTGGTGGAGCTCCAGCTTAGAAATG +
Preference number: 5 (lower is better)
Translates to: LMHLPRRTLAFTVSV*RACCSCWWSSSLEM
Trigger: CATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCTCCTGGGGAGGTGCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp ACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTGCTGCTCTTGCTaGTGGAGCTCCAGCTTAGAAATGCGAGTCTGGCAGGATTCCAAG +
Preference number: 5 (lower is better)
Translates to: TLAFTVSVCRACCSC*WSSSLEMRVWQDSK
Trigger: CTTGGAATCCTGCCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGTCCGGGACATCAAAGTaGAGGTTGGTGTCTGACCCC +
Preference number: 5 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWSGTSK*RLVSDP
Trigger: GGGGTCAGACACCAACCTCAACTTTGATGTCCCGGA...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGGCAGTGAGTTTGACCTaGTGGAAGTCCAGGATGCCA +
Preference number: 5 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKAVSLT*WKSRMP
Trigger: TGGCATCCTGGACTTCCACAAGGTCAAACTCACTGC...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACCTGCCATACTTGGGTTaGTTCACGATGGTAGCGCTG +
Preference number: 5 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHLPYLG*FTMVAL
Trigger: CAGCGCTACCATCGTGAACAAACCCAAGTATGGCAG...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTGCCTGCAGCAGATGGCGGGAGTGGTGGGACAAGGGGCTCAACAGCAGTTTCCGAATCATGCATATCCTaGCTTTTTATAGGACTCACA +
Preference number: 5 (lower is better)
Translates to: LPAADGGSGGTRGSTAVSESCIS*LFIGLT
Trigger: TGTGAGTCCTATAAAAAGCAAGGATATGCATGATTC...GGAAACTGCTGTTGAGCCCCTTGTCCCACCACTCCCGCCATCTGCTGCAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACAGACAGGTGGCAACCTaGGCTCAAACACTGGACTTA +
Preference number: 5 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYRQVAT*AQTLDL
Trigger: TAAGTCCAGTGTTTGAGCCAAGGTTGCCACCTGTCT...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CGACTGACTGCTGTGGACACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAATAATGGCACCTGCTTaGGATTCATTGATGACACCA +
Preference number: 5 (lower is better)
Translates to: RLTAVDTEYMTGPMVPWRIMAPA*DSLMTP
Trigger: TGGTGTCATCAATGAATCCAAAGCAGGTGCCATTAT...TCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGTGTCCACAGCAGTCAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CAA 90 bp ACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGATCTGTCTGCAGTGAGTTaGACCTTGTGGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TECAAFHSLLYFCHWGEDLSAVS*TLWKSR
Trigger: CCTGGACTTCCACAAGGTCAAACTCACTGCAGACAG...ATCTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACCCCATCGCGCGATGTTaGCTCAATTTTTATCTGCTC +
Preference number: 5 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYPIARC*LNFYLL
Trigger: GAGCAGATAAAAATTGAGCAAACATCGCGCGATGGG...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACTGAGTACATGACGGGACCTATGGTCCCCTGGAGAGAAGCAGGGTGGATCACACCTGTATCTTTCCTCTaGCAGGGTCTGAGAAATAAA +
Preference number: 5 (lower is better)
Translates to: TEYMTGPMVPWREAGWITPVSFL*QGLRNK
Trigger: TTTATTTCTCAGACCCTGCAAGAGGAAAGATACAGG...TGTGATCCACCCTGCTTCTCTCCAGGGGACCATAGGTCCCGTCATGTACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAAAAATCAGGTGTTGGTaGCCTGGGTATGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTKIRCW*PGYEKV
Trigger: CACCTTCTCATACCCAGGCAACCAACACCTGATTTT...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGACACCTCAGTGCACTaGAACTTTAGAGGCTATGGT +
Preference number: 5 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYDTSVH*NFRGYG
Trigger: ACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGTC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACCCTGCTTTGGATTCATaGATGACACCACAATGGGGT +
Preference number: 5 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHPALDS*MTPQWG
Trigger: ACCCCATTGTGGTGTCATCAATGAATCCAAAGCAGG...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS CCA 90 bp CAAAATATAGCAAGAAGAGTCACGGCAAAGAAGGTGCCAAGAATGTaGCAGCGACTCTTCATCATGGGTGAGACGAACTTCGCGATGGTG +
Preference number: 5 (lower is better)
Translates to: QNIARRVTAKKVPRM*QRLFIMGETNFAMV
Trigger: CACCATCGCGAAGTTCGTCTCACCCATGATGAAGAGTCGCTGCCACATTCTTGGCACCTTCTTTGCCGTGACTCTTCTTGCTATATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGCAGTGAGTTTGACCTaGTGGAAGTCCAGGATGCCA +
Preference number: 5 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSAVSLT*WKSRMP
Trigger: TGGCATCCTGGACTTCCACAAGGTCAAACTCACTGC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGCTGTCTGCAGTGAGTTaGACCTTGTGGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSLSAVS*TLWKSR
Trigger: CCTGGACTTCCACAAGGTCAAACTCACTGCAGACAG...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGTTATTCCGGATCAGGTaGGCAAACTCTCTGGACTTA +
Preference number: 5 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKLFRIR*ANSLDL
Trigger: TAAGTCCAGAGAGTTTGCCAACCTGATCCGGAATAA...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTTAGGAGTGTAAGTTACACTCAGCACTCAGCCCACGCTGAGTCTGATGCCCACTCATCACTGCCATACTaGGGTTTGTTCACGATGGTA +
Preference number: 5 (lower is better)
Translates to: FRSVSYTQHSAHAESDAHSSLPY*GLFTMV
Trigger: TACCATCGTGAACAAACCCAAGTATGGCAGTGATGA...GTGGGCATCAGACTCAGCGTGGGCTGAGTGCTGAGTGTAACTTACACTCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp AACAGCTCCAGACTAGAGGGGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACGCATTTGCTAGCCAGTaGAGACAAAATCAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NSSRLEGTECAAFHSLLYAFASQ*RQNQVL
Trigger: CAACACCTGATTTTGTCTCAACTGGCTAGCAAATGC...GTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCCCCTCTAGTCTGGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp AGGCAGGCTAGATATTCCAAACAGCACCTACCATATGACTCAGCCTaGACTTTGGAGATACTGCTCACATTATCTCGGGGTATTCCTGTG +
Preference number: 5 (lower is better)
Translates to: RQARYSKQHLPYDSA*TLEILLTLSRGIPV
Trigger: CACAGGAATACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCCAGGCTGAGTCATATGGTAGGTGCTGTTTGGAATATCTAGCCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS-3UTR CAA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTTCATCACTGCCATACTaGGGTTTGTTCACGATGGTA +
Preference number: 5 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPSSLPY*GLFTMV
Trigger: TACCATCGTGAACAAACCCAAGTATGGCAGTGATGA...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGAGACAGGTGGCAACCTaGGCTCAAACACTGGACTTA +
Preference number: 5 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSRQVAT*AQTLDL
Trigger: TAAGTCCAGTGTTTGAGCCAAGGTTGCCACCTGTCT...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GGACGGAGTGTGCTGCTTTCCATTCTCTTCTCTACTTCTGTCACTGGGGAGAAGCAGGGATGTGAACTTTaGAATGTTTTCAGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GRSVLLSILFSTSVTGEKQGCEL*NVFSSE
Trigger: CTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTG...CTTCTCCCCAGTGACAGAAGTAGAGAAGAGAATGGAAAGCAGCACACTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGATGTCCGAAGTGGTGCTaGGAAAGATTCACAGATACC +
Preference number: 5 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRCPKWC*ERFTDT
Trigger: GGTATCTGTGAATCTTTCCAAGCACCACTTCGGACA...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp GGTCTGAGAAATAAAACCATATTCTCTCTTAAACTGCACCTTCAGTaGCTCGATGTCCTCAGCCAGCTGAGCTTGGGTATCCTTGATCTC +
Preference number: 5 (lower is better)
Translates to: GLRNKTIFSLKLHLQ*LDVLSQLSLGILDL
Trigger: GAGATCAAGGATACCCAAGCTCAGCTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATATGGTTTTATTTCTCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 90 bp CCAAACAGCACCTACCATATGACTCAGCCTGGACTTTGGAGATACTaGTCACATTATCTCGGGGTATTCCTGTGTTTGTCTCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: PNSTYHMTQPGLWRY*SHYLGVFLCLSQRN
Trigger: GTTTCTCTGAGACAAACACAGGAATACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCCAGGCTGAGTCATATGGTAGGTGCTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS-3UTR CAA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGATTATTCCGGATCAGGTaGGCAAACTCTCTGGACTTA +
Preference number: 5 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRLFRIR*ANSLDL
Trigger: TAAGTCCAGAGAGTTTGCCAACCTGATCCGGAATAA...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACATTTGCTAGGCTGAGCACTGGAATGGTGTGGGCTGGTGTGAAAATGAAGCCTAGTCTGATGAGGGATTaGAAAACATTCCTGCACACT +
Preference number: 5 (lower is better)
Translates to: TFARLSTGMVWAGVKMKPSLMRD*KTFLHT
Trigger: AGTGTGCAGGAATGTTTTCAAATCCCTCATCAGACT...AGGCTTCATTTTCACACCAGCCCACACCATTCCAGTGCTCAGCCTAGCAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGGACACCTCAGTGCACTaGAACTTTAGAGGCTATGGT +
Preference number: 5 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSDTSVH*NFRGYG
Trigger: ACCATAGCCTCTAAAGTTCAAGTGCACTGAGGTGTC...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACATTTCCATCTTCCTCTTaGTTATACACACAGAGACAC +
Preference number: 5 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTFPSSS*LYTQRH
Trigger: GTGTCTCTGTGTGTATAACAAAGAGGAAGATGGAAA...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp ACAAACTTGGGACTAATCCCATGTTCATTGTCCAAACCCAGCAACGGAGTACTTAGTACAAGGACTGAGTaGGCAACTGCTACGGAGTTA +
Preference number: 5 (lower is better)
Translates to: TNLGLIPCSLSKPSNGVLSTRTE*ATATEL
Trigger: TAACTCCGTAGCAGTTGCCAACTCAGTCCTTGTACT...AAGTACTCCGTTGCTGGGTTTGGACAATGAACATGGGATTAGTCCCAAGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS-3UTR CAA 90 bp ACCATTCAGTCACACCCTACGTCCTCGTTTCCTCATGCTTTCAGCGTTCCGACAGAATCATGCATATCCTaGCTTTTTATAGGACTCACA +
Preference number: 5 (lower is better)
Translates to: TIQSHPTSSFPHAFSVPTESCIS*LFIGLT
Trigger: TGTGAGTCCTATAAAAAGCAAGGATATGCATGATTC...TGTCGGAACGCTGAAAGCATGAGGAAACGAGGACGTAGGGTGTGACTGAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGGCATTTGCTAGCCAGTaGAGACAAAATCAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWAFASQ*RQNQVL
Trigger: CAACACCTGATTTTGTCTCAACTGGCTAGCAAATGC...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp TTCTCTAAACTAACAGCAGCACTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAATATTGCACTTAATTaGAATCCAGGGGGACCTGAT +
Preference number: 5 (lower is better)
Translates to: FSKLTAALNPWCVRSGAWNIALN*NPGGPD
Trigger: ATCAGGTCCCCCTGGATTCAAATTAAGTGCAATATT...CCAAGCACCACTTCGGACACACCAGGGATTGAGTGCTGCTGTTAGTTTAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTTATGTTCAGTGAGATGTTAAGAGACAGGTGGCAACCTTGGCTCAAACACTGGAACTCTCTGGACTTATaGAAAACGAACACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LMFSEMLRDRWQPWLKHWNSLDL*KTNTGG
Trigger: TCCACCTGTGTTCGTTTTCAATAAGTCCAGAGAGTT...CCAGTGTTTGAGCCAAGGTTGCCACCTGTCTCTTAACATCTCACTGAACATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CCCAAACAGGGATGTGAACTTTTGAATGTTTTCAGCTCAGAGGCAGTATGGTCGCCTGTATCTTTCCTCTaGCAGGGTCTGAGAAATAAA +
Preference number: 5 (lower is better)
Translates to: PKQGCELLNVFSSEAVWSPVSFL*QGLRNK
Trigger: TTTATTTCTCAGACCCTGCAAGAGGAAAGATACAGG...CGACCATACTGCCTCTGAGCTGAAAACATTCAAAAGTTCACATCCCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTCAATCCCTGGTGTGTCCGAAGTGGTGCTTGGAAAGATTCACAGATACCAAGAACCAGTGGCTTCATCTaGGTATTATCATCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: LNPWCVRSGAWKDSQIPRTSGFI*VLSSFL
Trigger: TAGAAAGGATGATAATACCAAGATGAAGCCACTGGT...TCTTGGTATCTGTGAATCTTTCCAAGCACCACTTCGGACACACCAGGGATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTCGTTTCCTCATGCTTTCAGCGTTCCGACACCTCAGTGCACTTGAACTTTAGAACCAGTGGCTTCATCTaGGTATTATCATCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: LVSSCFQRSDTSVHLNFRTSGFI*VLSSFL
Trigger: TAGAAAGGATGATAATACCAAGATGAAGCCACTGGT...TCTAAAGTTCAAGTGCACTGAGGTGTCGGAACGCTGAAAGCATGAGGAAACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTAGTACAAGGACTGAGTaGGCAACTGCTACGGAGTTA +
Preference number: 5 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGSTRTE*ATATEL
Trigger: TAACTCCGTAGCAGTTGCCAACTCAGTCCTTGTACT...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAAAAATCAGGTGTTGGTaGCCTGGGTATGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSKIRCW*PGYEKV
Trigger: CACCTTCTCATACCCAGGCAACCAACACCTGATTTT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp GTCCTAGTTTTTCTTACACACGAGTCCGCACAATCATTCACTGTAAAATTTGGTCCTCAGGTAGACTTGTaGGATAACAGGTGTGTGATA +
Preference number: 5 (lower is better)
Translates to: VLVFLTHESAQSFTVKFGPQVDL*DNRCVI
Trigger: TATCACACACCTGTTATCCAACAAGTCTACCTGAGG...ACCAAATTTTACAGTGAATGATTGTGCGGACTCGTGTGTAAGAAAAACTAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 90 bp TGGCTTCATCTTGGTATTATCATCCTTTCTATGGCACACAGGATATaGTCCCAGTTTTTACAAAATATAGCAAGAAGAGTCACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: WLHLGIIILSMAHRI*SQFLQNIARRVTAK
Trigger: CTTTGCCGTGACTCTTCTTGCTATATTTTGTAAAAACTGGGACCATATCCTGTGTGCCATAGAAAGGATGATAATACCAAGATGAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAAACTCTCTGGACTTATaGAAAACGAACACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSNSLDL*KTNTGG
Trigger: TCCACCTGTGTTCGTTTTCAATAAGTCCAGAGAGTT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCAAGTCTGATGAGGGATTaGAAAACATTCCTGCACACT +
Preference number: 5 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSSLMRD*KTFLHT
Trigger: AGTGTGCAGGAATGTTTTCAAATCCCTCATCAGACT...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS-3UTR CAA 90 bp CTTGTACTAAATGCTCAACGATTCCATTCTCTCAGACTATGGAACATTCTGTCATTCCAAGCTACAAACTaGGGACTAATCCCATGTTCA +
Preference number: 5 (lower is better)
Translates to: LVLNAQRFHSLRLWNILSFQATN*GLIPCS
Trigger: TGAACATGGGATTAGTCCCAAGTTTGTAGCTTGGAA...TGACAGAATGTTCCATAGTCTGAGAGAATGGAATCGTTGAGCATTTAGTACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS GCA 72 bp GTCTTCTGGGGCTGCCGCGCCGCGAGCCACCGGCTGTaGTCGGGATCACCCTGGGAGCCGCGGGCGAGGGGG +
Preference number: 6 (lower is better)
Translates to: VFWGCRAASHRL*SGSPWEPRARG
Trigger: CCCCCTCGCCCGCGGCTCCCAGGGTGATCCCGAGCACAGCCGGTGGCTCGCGGCGCGGCAGCCCCAGAAGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS TCA 72 bp GGTGCCGGCCGGGGTACGAGTAGGTCCGGTCCACGGTaGGCGCCGTGTCGCTGCCCGGCATCTCCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: GAGRGTSRSGPR*APCRCPASPRS
Trigger: GGAGCGCGGAGATGCCGGGCAGCGACACGGCGCTCACCGTGGACCGGACCTACTCGTACCCCGGCCGGCACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS GCA 72 bp CGCGCTCCGGCCGCGAACTTTCCCGTCTTCTGGGGCTaGCGCGCCGCGAGCCACCGGCTGTGCTCGGGATCA +
Preference number: 6 (lower is better)
Translates to: RAPAANFPVFWG*RAASHRLCSGS
Trigger: TGATCCCGAGCACAGCCGGTGGCTCGCGGCGCGGCAGCCCCAGAAGACGGGAAAGTTCGCGGCCGGAGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS CCA 72 bp CATCTCCGCGCTCCGGCCGCGAACTTTCCCGTCTTCTaGGGCTGCCGCGCCGCGAGCCACCGGCTGTGCTCG +
Preference number: 6 (lower is better)
Translates to: HLRAPAANFPVF*GCRAASHRLCS
Trigger: CGAGCACAGCCGGTGGCTCGCGGCGCGGCAGCCCCAGAAGACGGGAAAGTTCGCGGCCGGAGCGCGGAGATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS GCA 72 bp CCAGGATCACGGCGAGCTTGCCCTGGCTGTCCAGTGTaGTGGCTCCACCAGCCCCAAACGACTGGTTTCCGT +
Preference number: 6 (lower is better)
Translates to: PGSRRACPGCPV*WLHQPQTTGFR
Trigger: ACGGAAACCAGTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 72 bp TCCCTCAGTTCCTCCAGGATCACGGCGAGCTTGCCCTaGCTGTCCAGTGTGCTGGCTCCACCAGCCCCAAAC +
Preference number: 6 (lower is better)
Translates to: SLSSSRITASLP*LSSVLAPPAPN
Trigger: GTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCTGGAGGAACTGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS TCA 72 bp TTCCAGAAGCTCCTCAGGGGTCCCTTTGGCCGGGGCTaGGTCCCATGTCCATGCCCTAGTTGCAAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: FQKLLRGPFGRG*VPCPCPSCKGG
Trigger: GCCTCCCTTGCAACTAGGGCATGGACATGGGACTCAGCCCCGGCCAAAGGGACCCCTGAGGAGCTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS CCA 72 bp CTGTCCAGTGTGCTGGCTCCACCAGCCCCAAACGACTaGTTTCCGTTACTGTCGGCCGAGCCTGACGTGCCA +
Preference number: 6 (lower is better)
Translates to: LSSVLAPPAPND*FPLLSAEPDVP
Trigger: TGGCACGTCAGGCTCGGCCGACAGTAACGGAAACCAGTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 90 bp TGGGTATCCTTGATCTCCCTCAGTTCCTCCAGGATCACGGCGAGCTaGCCCTGGCTGTCCAGTGTGCTGGCTCCACCAGCCCCAAACGAC +
Preference number: 6 (lower is better)
Translates to: WVSLISLSSSRITAS*PWLSSVLAPPAPND
Trigger: GTCGTTTGGGGCTGGTGGAGCCAGCACACTGGACAGCCAGGGCAAGCTCGCCGTGATCCTGGAGGAACTGAGGGAGATCAAGGATACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 72 bp AGGAGCAGAGCAGGATCGGCAGCTAGCTCACCCTCCTaGCCGAGGCATTTGAATCTGCAAGGCAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: RSRAGSAASSPS*PRHLNLQGRQA
Trigger: AGCCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGCTGCCGATCCTGCTCTGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551457.1
ENST00000552239.1
CDS TCA 72 bp CCTCGATGTCCTCAGCCAGCTGAGCTTGGGTATCCTTaGTCTCCCTCAGTTCCTCCAGGATCACGGCGAGCT +
Preference number: 6 (lower is better)
Translates to: PRCPQPAELGYP*SPSVPPGSRRA
Trigger: AGCTCGCCGTGATCCTGGAGGAACTGAGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAGGACATCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS TCA 72 bp CGTATGTTCAGGGGCAGGCTTAAGGTATTCATGTCATaGCGTTCTACCCGGCTCTTGCAGCGGTGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: RMFRGRLKVFMS*RSTRLLQRWCR
Trigger: CCGGCACCACCGCTGCAAGAGCCGGGTAGAACGTCATGACATGAATACCTTAAGCCTGCCCCTGAACATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261226.9
CDS TCA 72 bp AAGGTCAGGAGATCGAGACCATCCTGGCTGACACGGTaGAACCCCATCTCAAGGGCCACACAGCAAACCCAG +
Preference number: 6 (lower is better)
Translates to: KVRRSRPSWLTR*NPISRATQQTQ
Trigger: CTGGGTTTGCTGTGTGGCCCTTGAGATGGGGTTTCACCGTGTCAGCCAGGATGGTCTCGATCTCCTGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS GCA 72 bp CTCCCCAGGAGAACTTTAGCATTCACGGTGTCTGTCTaGAGAGCTTGCTGCTCTTGCTGGTGGAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LPRRTLAFTVSV*RACCSCWWSSS
Trigger: GCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCTCCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 72 bp ACCCCTGGCATGCCCGATTTGCTGCTCTCCATGCAATaGGGGGCAGTTCGAGATTTCACGTGGGCATCTTTC +
Preference number: 6 (lower is better)
Translates to: TPGMPDLLLSMQ*GAVRDFTWASF
Trigger: GAAAGATGCCCACGTGAAATCTCGAACTGCCCCCCATTGCATGGAGAGCAGCAAATCGGGCATGCCAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 90 bp CTTAAACTGCACCTTCAGTGCCTCGATGTCCTCAGCCAGCTGAGCTaGGGTATCCTTGATCTCCCTCAGTTCCTCCAGGATCACGGCGAG +
Preference number: 6 (lower is better)
Translates to: LKLHLQCLDVLSQLS*GILDLPQFLQDHGE
Trigger: CTCGCCGTGATCCTGGAGGAACTGAGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 90 bp AGCAGAGCAGGATCGGCAGCTAGCTCACCCTCCTGCCCGAGGCATTaGAATCTGCAAGGCAGGCAGGCTAGATATTCCAAACAGCACCTA +
Preference number: 6 (lower is better)
Translates to: SRAGSAASSPSCPRH*NLQGRQARYSKQHL
Trigger: TAGGTGCTGTTTGGAATATCTAGCCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGCTGCCGATCCTGCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551457.1
ENST00000552239.1
CDS TCA 72 bp AACTGCACCTTCAGTGCCTCGATGTCCTCAGCCAGCTaGGCTTGGGTATCCTTGATCTCCCTCAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: NCTFSASMSSAS*AWVSLISLSSS
Trigger: GGAGGAACTGAGGGAGATCAAGGATACCCAAGCTCAGCTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS TCA 72 bp GATCGGCAGCTAGCTCACCCTCCTGCCCGAGGCATTTaGATCTGCAAGGCAGGCAGGCTAGATATTCCAAAC +
Preference number: 6 (lower is better)
Translates to: DRQLAHPPARGI*ICKAGRLDIPN
Trigger: GTTTGGAATATCTAGCCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGCTGCCGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551457.1
ENST00000552239.1
CDS GCA 72 bp GCATTCACGGTGTCTGTCTGCAGAGCTTGCTGCTCTTaGTGGTGGAGCTCCAGCTTAGAAATGCGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: AFTVSVCRACCS*WWSSSLEMRVW
Trigger: CCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 72 bp TTCACGGTGTCTGTCTGCAGAGCTTGCTGCTCTTGCTaGTGGAGCTCCAGCTTAGAAATGCGAGTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: FTVSVCRACCSC*WSSSLEMRVWQ
Trigger: CTGCCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 72 bp GGATCGGCAGCTAGCTCACCCTCCTGCCCGAGGCATTaGAATCTGCAAGGCAGGCAGGCTAGATATTCCAAA +
Preference number: 6 (lower is better)
Translates to: GSAASSPSCPRH*NLQGRQARYSK
Trigger: TTTGGAATATCTAGCCTGCCTGCCTTGCAGATTCAAATGCCTCGGGCAGGAGGGTGAGCTAGCTGCCGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000551457.1
ENST00000552239.1
CDS TCA 72 bp CCCAAACGACTGGTTTCCGTTACTGTCGGCCGAGCCTaGCGTGCCACTCGAACATTCATCATCACTGCCATA +
Preference number: 6 (lower is better)
Translates to: PKRLVSVTVGRA*RATRTFIITAI
Trigger: TATGGCAGTGATGATGAATGTTCGAGTGGCACGTCAGGCTCGGCCGACAGTAACGGAAACCAGTCGTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 72 bp AGCATTCACGGTGTCTGTCTGCAGAGCTTGCTGCTCTaGCTGGTGGAGCTCCAGCTTAGAAATGCGAGTCTG +
Preference number: 6 (lower is better)
Translates to: SIHGVCLQSLLL*LVELQLRNASL
Trigger: CAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 90 bp GAGAACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTGCTGCTCTaGCTGGTGGAGCTCCAGCTTAGAAATGCGAGTCTGGCAGGATTC +
Preference number: 6 (lower is better)
Translates to: ENFSIHGVCLQSLLL*LVELQLRNASLAGF
Trigger: GAATCCTGCCAGACTCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 72 bp ACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTGCTaGTCTTGCTGGTGGAGCTCCAGCTTAGAAATGCGA +
Preference number: 6 (lower is better)
Translates to: TLAFTVSVCRAC*SCWWSSSLEMR
Trigger: TCGCATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 72 bp GCAAGAAGAGTCACGGCAAAGAAGGTGCCAAGAATGTaGCAGCGACTCTTCATCATGGGTGAGACGAACTTC +
Preference number: 6 (lower is better)
Translates to: ARRVTAKKVPRM*QRLFIMGETNF
Trigger: GAAGTTCGTCTCACCCATGATGAAGAGTCGCTGCCACATTCTTGGCACCTTCTTTGCCGTGACTCTTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS TCA 72 bp TCTGGACTTATTGAAAACGAACACAGGTGGAGTAAGTaGGACCCCTGGCATGCCCGATTTGCTGCTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SGLIENEHRWSK*DPWHARFAALH
Trigger: ATGGAGAGCAGCAAATCGGGCATGCCAGGGGTCTCACTTACTCCACCTGTGTTCGTTTTCAATAAGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 72 bp AGAACTTTAGCATTCACGGTGTCTGTCTGCAGAGCTTaGTGCTCTTGCTGGTGGAGCTCCAGCTTAGAAATG +
Preference number: 6 (lower is better)
Translates to: RTLAFTVSVCRA*CSCWWSSSLEM
Trigger: CATTTCTAAGCTGGAGCTCCACCAGCAAGAGCAGCAAGCTCTGCAGACAGACACCGTGAATGCTAAAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 72 bp TTTTGCTTCAGGCTGTCTGCAGTGAGTTTGACCTTGTaGAAGTCCAGGATGCCATCCGGGACATCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: FCFRLSAVSLTL*KSRMPSGTSKL
Trigger: CAACTTTGATGTCCCGGATGGCATCCTGGACTTCCACAAGGTCAAACTCACTGCAGACAGCCTGAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261226.9
ENST00000548918.1
ENST00000551457.1
CDS CAA 72 bp AGATACTGCTCACATTATCTCGGGGTATTCCTGTGTTaGTCTCAGAGAAACTCCACGCCCTGCACTGTACCC +
Preference number: 6 (lower is better)
Translates to: RYCSHYLGVFLC*SQRNSTPCTVP
Trigger: GGGTACAGTGCAGGGCGTGGAGTTTCTCTGAGACAAACACAGGAATACCCCGAGATAATGTGAGCAGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS CAA 90 bp ACGTGGGCATCTTTCAAAGAGCGATGTATATCCTTCAGGTGGTCTTaGGAAATGTCCTTTGAGCTCCTAGAGGCTCCATTCTGCTCGATC +
Preference number: 6 (lower is better)
Translates to: TWASFKERCISFRWS*EMSFELLEAPFCSI
Trigger: GATCGAGCAGAATGGAGCCTCTAGGAGCTCAAAGGACATTTCCAAAGACCACCTGAAGGATATACATCGCTCTTTGAAAGATGCCCACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CAA 90 bp GGACTTTGGAGATACTGCTCACATTATCTCGGGGTATTCCTGTGTTaGTCTCAGAGAAACTCCACGCCCTGCACTGTACCCAATACAAAT +
Preference number: 6 (lower is better)
Translates to: GLWRYCSHYLGVFLC*SQRNSTPCTVPNTN
Trigger: ATTTGTATTGGGTACAGTGCAGGGCGTGGAGTTTCTCTGAGACAAACACAGGAATACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS CAA 72 bp TCCAAACAGCACCTACCATATGACTCAGCCTGGACTTaGGAGATACTGCTCACATTATCTCGGGGTATTCCT +
Preference number: 6 (lower is better)
Translates to: SKQHLPYDSAWT*EILLTLSRGIP
Trigger: AGGAATACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCCAGGCTGAGTCATATGGTAGGTGCTGTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS CAA 90 bp GCTAGATATTCCAAACAGCACCTACCATATGACTCAGCCTGGACTTaGGAGATACTGCTCACATTATCTCGGGGTATTCCTGTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: ARYSKQHLPYDSAWT*EILLTLSRGIPVFV
Trigger: GACAAACACAGGAATACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCCAGGCTGAGTCATATGGTAGGTGCTGTTTGGAATATCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS GCA 72 bp CTAAGGAATTTTTCAAGTGAGCAATGTTGTCGGCGCTaGCAAACTTATTCCGGATCAGGTTGGCAAACTCTC +
Preference number: 6 (lower is better)
Translates to: LRNFSSEQCCRR*QTYSGSGWQTL
Trigger: GAGAGTTTGCCAACCTGATCCGGAATAAGTTTGGCAGCGCCGACAACATTGCTCACTTGAAAAATTCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 72 bp AATAAAACCATATTCTCTCTTAAACTGCACCTTCAGTaGCTCGATGTCCTCAGCCAGCTGAGCTTGGGTATC +
Preference number: 6 (lower is better)
Translates to: NKTIFSLKLHLQ*LDVLSQLSLGI
Trigger: GATACCCAAGCTCAGCTGGCTGAGGACATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATATGGTTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS GCA 72 bp ACCTACCATATGACTCAGCCTGGACTTTGGAGATACTaGTCACATTATCTCGGGGTATTCCTGTGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: TYHMTQPGLWRY*SHYLGVFLCLS
Trigger: AGACAAACACAGGAATACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCCAGGCTGAGTCATATGGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS CCA 72 bp AGATATTCCAAACAGCACCTACCATATGACTCAGCCTaGACTTTGGAGATACTGCTCACATTATCTCGGGGT +
Preference number: 6 (lower is better)
Translates to: RYSKQHLPYDSA*TLEILLTLSRG
Trigger: ACCCCGAGATAATGTGAGCAGTATCTCCAAAGTCCAGGCTGAGTCATATGGTAGGTGCTGTTTGGAATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552239.1
CDS CAA 72 bp TTATTCCGGATCAGGTTGGCAAACTCTCTGGACTTATaGAAAACGAACACAGGTGGAGTAAGTGAGACCCCT +
Preference number: 6 (lower is better)
Translates to: LFRIRLANSLDL*KTNTGGVSETP
Trigger: AGGGGTCTCACTTACTCCACCTGTGTTCGTTTTCAATAAGTCCAGAGAGTTTGCCAACCTGATCCGGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1
CDS CCA 72 bp CTTGGTATTATCATCCTTTCTATGGCACACAGGATATaGTCCCAGTTTTTACAAAATATAGCAAGAAGAGTC +
Preference number: 6 (lower is better)
Translates to: LGIIILSMAHRI*SQFLQNIARRV
Trigger: GACTCTTCTTGCTATATTTTGTAAAAACTGGGACCATATCCTGTGTGCCATAGAAAGGATGATAATACCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261226.9
ENST00000551457.1