RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMCC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000133069

Ensembl transcript IDs: ENST00000329800.7, ENST00000330675.12, ENST00000358024.8, ENST00000367159.2, ENST00000468846.5, ENST00000481950.2, ENST00000495538.5, ENST00000545499.5, ENST00000637895.1, ENST00000648708.1

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCTCCACACTAGCTGCTCTGAGCCTGCTCTCTGGCCCTGGAGGTaGCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCGGCC +
Preference number: 1 (lower is better)
Translates to: ELHTSCSEPALWPWR*PKARDPPIPVFSAA
Trigger: GGCCGCAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGAGCAGCTAGTGTGGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 90 bp TGGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTaGTACTCAGCAGGGAAGACACTGGGGGCACGGGTAGGGAACAAA +
Preference number: 1 (lower is better)
Translates to: WKGPGFRERMGQDLS*YSAGKTLGARVGNK
Trigger: TTTGTTCCCTACCCGTGCCCCCAGTGTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 90 bp GGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGC +
Preference number: 1 (lower is better)
Translates to: GAGAAGMDSLGRRPN*THKEVQGSLLEKCG
Trigger: GCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 90 bp CTCCCAGCCAGGATGATCCAAAGGCTAAATGGAATGGAAGGGCCCTaGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGC +
Preference number: 1 (lower is better)
Translates to: LPARMIQRLNGMEGP*LQREDGAGPLLVLS
Trigger: GCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCCATTCCATTTAGCCTTTGGATCATCCTGGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 90 bp AAACAATCCAACCCCATGTCCACCTCTGCTCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCA +
Preference number: 1 (lower is better)
Translates to: KQSNPMSTSAPLGHR*PHYLQVGLHSKLPS
Trigger: TGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTGGACATGGGGTTGGATTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 90 bp AAGCAAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGGTCCC +
Preference number: 1 (lower is better)
Translates to: KQVQRRGQELLEWTV*AGGQTGHTKKSKGP
Trigger: GGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 90 bp GAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTaGTGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAA +
Preference number: 1 (lower is better)
Translates to: EKVSDRSKYREGGRS*WNGQFGQEAKLDTQ
Trigger: TTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 90 bp GTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATaGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCC +
Preference number: 1 (lower is better)
Translates to: VRQKQVQRRGQELLE*TVWAGGQTGHTKKS
Trigger: GGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 90 bp GAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTaGTTTCCCTGCTCTAGGGGATTCCTCTCTCCTTTTCCAAGAAAT +
Preference number: 1 (lower is better)
Translates to: EDIYFSGRCTTAGRH*FPCSRGFLSPFPRN
Trigger: ATTTCTTGGAAAAGGAGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCACCTCTGCTCCACTTaGCCACAGGTGCCCGCACTA +
Preference number: 2 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLHLCST*PQVPAL
Trigger: TAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGTCTGAGCCTGCTCTCTaGCCCTGGAGGTGCCCGAAG +
Preference number: 2 (lower is better)
Translates to: GRALASERGWGRTSPGTQSEPAL*PWRCPK
Trigger: CTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGA...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCCTGCTCTCTGGCCCTaGAGGTGCCCGAAGGCTAGG +
Preference number: 2 (lower is better)
Translates to: WLQREDGAGPLLVLSREDPALWP*RCPKAR
Trigger: CCTAGCCTTCGGGCACCTCCAGGGCCAGAGAGCAGG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTCTGAGCCTGCTCTCTaGCCCTGGAGGTGCCCGAAG +
Preference number: 2 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSEPAL*PWRCPK
Trigger: CTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNSKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCACCTCTGCTCCACTTaGCCACAGGTGCCCGCACTA +
Preference number: 2 (lower is better)
Translates to: WLQREDGAGPLLVLSREDHLCST*PQVPAL
Trigger: TAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: ANREKVSDRSKYREGGRSSKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: GRALASERGWGRTSPGTQGRRPN*THKEVQ
Trigger: TTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCCCCATGTCCACCTCTaGTCCACTTGGCCACAGGTG +
Preference number: 2 (lower is better)
Translates to: FILTISTRENRSYLRGGLPHVHL*STWPQV
Trigger: CACCTGTGGCCAAGTGGAGCAGAGGTGGACATGGGG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGA +
Preference number: 2 (lower is better)
Translates to: WLQREDGAGPLLVLSREDLEWTV*AGGQTG
Trigger: TCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGGGGGCAGGAGCTGCTaGAATGGACAGTTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: FILTISTRENRSYLRGGLGGRSC*NGQFGQ
Trigger: CTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCACCTCTGCTCCACTTaGCCACAGGTGCCCGCACTA +
Preference number: 2 (lower is better)
Translates to: FILTISTRENRSYLRGGLHLCST*PQVPAL
Trigger: TAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTCTGAGCCTGCTCTCTaGCCCTGGAGGTGCCCGAAG +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSSEPAL*PWRCPK
Trigger: CTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGATAGTGGGGCTGGGTaGCTCGGTCCCACTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSDSGAG*LGPTSP
Trigger: GGGAGAAGTGGGACCGAGCCACCCAGCCCCACTATC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CAA 90 bp GAAGCAAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGGTCC +
Preference number: 2 (lower is better)
Translates to: EASTEKGAGAAGMDS*GRRPNWTHKEVQGS
Trigger: GGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: FILTISTRENRSYLRGGLPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGGGGGCAGGAGCTGCTaGAATGGACAGTTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSGGRSC*NGQFGQ
Trigger: CTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCAGGCCACACCCACCTaGCCTGCAGAGCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLQATPT*PAEPSP
Trigger: GGGGCTGGGCTCTGCAGGCCAGGTGGGTGTGGCCTG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGAAGGGGGCAGGAGCTaGTGGAATGGACAGTTTGGG +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSEGGRS*WNGQFG
Trigger: CCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGTCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGSKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCACCTCTGCTCCACTTaGCCACAGGTGCCCGCACTA +
Preference number: 2 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGHLCST*PQVPAL
Trigger: TAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGGAATGGAAGGGCCCTaGCTTCAGAGAGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSGMEGP*LQREDG
Trigger: CCCATCCTCTCTCTGAAGCCAGGGCCCTTCCATTCC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAACTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGA +
Preference number: 2 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGELEWTV*AGGQTG
Trigger: TCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAG...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGA +
Preference number: 2 (lower is better)
Translates to: FILTISTRENRSYLRGGLLEWTV*AGGQTG
Trigger: TCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCCTGCTCTCTGGCCCTaGAGGTGCCCGAAGGCTAGG +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLPALWP*RCPKAR
Trigger: CCTAGCCTTCGGGCACCTCCAGGGCCAGAGAGCAGG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGATAGTGGGGCTGGGTaGCTCGGTCCCACTTCTCCC +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLDSGAG*LGPTSP
Trigger: GGGAGAAGTGGGACCGAGCCACCCAGCCCCACTATC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSGRRPN*THKEVQ
Trigger: TTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGATCCAAAGGCTAAATaGAATGGAAGGGCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSDPKAK*NGRALA
Trigger: AGCCAGGGCCCTTCCATTCCATTTAGCCTTTGGATC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CAA 90 bp GAGAAAACCGTAGCTATCTCCGAGGTGGGCTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACT +
Preference number: 2 (lower is better)
Translates to: EKTVAISEVGSFLGK*RQSPLLLFLMVFLT
Trigger: AGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCCACCTCGGAGATAGCTACGGTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGAGCTCCACACTAGCTaGTCTGAGCCTGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLELHTS*SEPALW
Trigger: CCAGAGAGCAGGCTCAGAGCAGCTAGTGTGGAGCTC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTATCCTGAGGGTCAGCTaGGAGAAGTCCTTGTGTAAC +
Preference number: 2 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGILRVS*EKSLCN
Trigger: GTTACACAAGGACTTCTCCCAGCTGACCCTCAGGAT...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGGGCAGGACCTCTCCTaGTACTCAGCAGGGAAGACA +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLGQDLS*YSAGKT
Trigger: TGTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGATCCAAAGGCTAAATaGAATGGAAGGGCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLDPKAK*NGRALA
Trigger: AGCCAGGGCCCTTCCATTCCATTTAGCCTTTGGATC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 72 bp CCGGCTGTAGGGCTGCTTGGGGATAGTGGGGCTGGGTaGCTCGGTCCCACTTCTCCCAGCCAGGATGATCCA +
Preference number: 3 (lower is better)
Translates to: PAVGLLGDSGAG*LGPTSPSQDDP
Trigger: TGGATCATCCTGGCTGGGAGAAGTGGGACCGAGCCACCCAGCCCCACTATCCCCAAGCAGCCCTACAGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 3 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 72 bp CCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTaGTACTCAGCAGGGAAGACACTGGGGGCACGGGTA +
Preference number: 3 (lower is better)
Translates to: PGFRERMGQDLS*YSAGKTLGARV
Trigger: TACCCGTGCCCCCAGTGTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLSFLGK*RQSPLL
Trigger: GAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 72 bp AACCCCATGTCCACCTCTGCTCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTAGGGCTGCATTCTAAG +
Preference number: 3 (lower is better)
Translates to: NPMSTSAPLGHR*PHYLQVGLHSK
Trigger: CTTAGAATGCAGCCCTACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTGGACATGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR CCA 72 bp GCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAG +
Preference number: 3 (lower is better)
Translates to: AAGMDSLGRRPN*THKEVQGSLLE
Trigger: CTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CAA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 3 (lower is better)
Translates to: FILTISTRENRSYLRGGLAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR-3UTR CAA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 3 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 72 bp TCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTaGTGGAATGGACAGTTTGGGCAGGAGGCCAAACTG +
Preference number: 3 (lower is better)
Translates to: SDRSKYREGGRS*WNGQFGQEAKL
Trigger: CAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 72 bp GGAAGGTGCACAACAGCTGGCAGGCACTGCTTTCCCTaGTCTAGGGGATTCCTCTCTCCTTTTCCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: GRCTTAGRHCFP*SRGFLSPFPRN
Trigger: ATTTCTTGGAAAAGGAGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
3UTR GCA 72 bp TATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTaGTTTCCCTGCTCTAGGGGATTCCTCTCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: YFSGRCTTAGRH*FPCSRGFLSPF
Trigger: AAAAGGAGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCCGCTGGGGGTCCGGTaGCCCATCGGGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLPLGVR*PIGHVQ
Trigger: CTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGCCCAGCCCCAGAGTTaGTGCCTGCCCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLAQPQS*CLPRLS
Trigger: GCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCAGGCCACACCCACCTaGCCTGCAGAGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLQATPT*PAEPSP
Trigger: GGGGCTGGGCTCTGCAGGCCAGGTGGGTGTGGCCTG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCGCCCCCAAAGCCGCTaGTGCCTGCGCGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQRPQSR*CLRARW
Trigger: CCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCG...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGGCTGGCGCCCCGCTTaGTGGAGGGCCGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAGWRPA*WRAGSG
Trigger: TCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGAGCACGTCCTTGGGCTaGCGCGAGGGCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLSTSLG*REGPFC
Trigger: GCAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCTCAGTGCCCGGGCTaGCTCCTCAGGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQAQCPG*LLRGPI
Trigger: GATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGGTCAATGGCGGCCTTaGTCCGCTGGGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLGQWRP*SAGGPV
Trigger: CACCGGACCCCCAGCGGACCAAGGCCGCCATTGACC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTGCCTGCGCGCACGTTaGCGCCCACGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLCLRAR*RPRPSA
Trigger: GGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCCGCTGGGGGTCCGGTaGCCCATCGGGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNPLGVR*PIGHVQ
Trigger: CTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTGCCGCCCCCACTGCTaGTGTGCAGGCTGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNCRPHC*CAGWRP
Trigger: GGGGCGCCAGCCTGCACAGCAGCAGTGGGGGCGGCA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCCCGCAGCACGTCCTTaGGCTGCCGCGAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAPAARP*AAARAR
Trigger: ACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCGGGCACGTCCAGGCTaGTGGGGCCGTCGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNRARPG*WGRRCH
Trigger: GTGACACCGACGGCCCCATCAGCCTGGACGTGCCCG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCGCCCCCAAAGCCGCTaGTGCCTGCGCGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNRPQSR*CLRARW
Trigger: CCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCGCCCCCAAAGCCGCTaGTGCCTGCGCGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGRPQSR*CLRARW
Trigger: CCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCGCCCCCAAAGCCGCTaGTGCCTGCGCGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEARPQSR*CLRARW
Trigger: CCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCAGAGAGGCTGCCCTTaGCGCCCTCCACCACGCCGC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGQRGCP*RPPPRR
Trigger: GCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCAGCTCCAGCTTGGTaGCCCGGGTCAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQAAPAW*PGSGRT
Trigger: AGTCCTGCCTGACCCGGGTCACCAAGCTGGAGCTGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACAGGTACCCGGGGCTCTaGGGCCCCAGCTGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDRYPGL*GPSCLR
Trigger: CCGCAGACAGCTGGGGCCTCAGAGCCCCGGGTACCT...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR TCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGGCAGCGCCGGCGTCTaGAGTTGGCCCGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDGSAGV*SWPASR
Trigger: TCTGCTGGCGGGCCAACTTCAGACGCCGGCGCTGCC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCGCGAGGGCCCGTTCTaGTCAATCTCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLREGPF*SISFRR
Trigger: GCGCCTGAAGGAGATTGAGCAGAACGGGCCCTCGCG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGCTCAGTGCCCGGGCTaGCTCCTCAGGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNAQCPG*LLRGPI
Trigger: GATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGGCACTGCCGCTCAGTaGCCGGGCTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDGTAAQ*PGCLLR
Trigger: CCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGCCCAGCCCCAGAGTTaGTGCCTGCCCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNAQPQS*CLPRLS
Trigger: GCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGCCCAGCCCCAGAGTTaGTGCCTGCCCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAAQPQS*CLPRLS
Trigger: GCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCGGCCTTGGTCCGCTaGGGGTCCGGTGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSAALVR*GSGAPS
Trigger: CGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGGTGCAGGTGGTCAATaGCGGCCTTGGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQGAGGQ*RPWSAG
Trigger: CCCAGCGGACCAAGGCCGCCATTGACCACCTGCACC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGGCTGGAGACGAGTGTaGCACTGCCGCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQGWRRV*HCRSVP
Trigger: GGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCGGCTGAGCTGGCGCTaGCGCTGGAGCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLRLSWR*RWSTHH
Trigger: ATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCTGCCCCGGCTGAGCTaGCGCTGGCGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNLPRLS*RWRWST
Trigger: AGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCTGCCCCGGCTGAGCTaGCGCTGGCGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDLPRLS*RWRWST
Trigger: AGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCAGGCCACACCCACCTaGCCTGCAGAGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGQATPT*PAEPSP
Trigger: GGGGCTGGGCTCTGCAGGCCAGGTGGGTGTGGCCTG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCTTGCTTCGGGGACCTaGGTTGGGCGCCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGLASGT*VGRRGS
Trigger: GCTGCCGCGGCGCCCAACCCAGGTCCCCGAAGCAAG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR TCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCAGAGAGGCTGCCCTTaGCGCCCTCCACCACGCCGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSQRGCP*RPPPRR
Trigger: GCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACAAGCCGTGCCGGCGATaGGGTACCCGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNKPCRR*GTRGSE
Trigger: CTCAGAGCCCCGGGTACCTCATCGCCGGCACGGCTT...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCACCGCTGGGGGTCCGGTaGCCCATCGGGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPPLGVR*PIGHVQ
Trigger: CTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGG...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACAGCACGTCCTTGGGCTaGCGCGAGGGCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNSTSLG*REGPFC
Trigger: GCAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCT...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGGCACTGCCGCTCAGTaGCCGGGCTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSGTAAQ*PGCLLR
Trigger: CCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCCCAGCCCCAGAGTTaGTGCCTGCCCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSAQPQS*CLPRLS
Trigger: GCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGTCAGGTCGTTGAGCTaGTCCTCCAGCCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLVRSLS*SSSRSY
Trigger: GTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGAC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTGCTGCCGCCCCCACTaGTGCTGTGCAGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSCCRPH*CCAGWR
Trigger: GCGCCAGCCTGCACAGCAGCAGTGGGGGCGGCAGCA...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCGGCACTGGTGCTGGTaGAGGATGGCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNRHWCW*RMAARL
Trigger: CAGCCTGGCCGCCATCCTGCACCAGCACCAGTGCCG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGGTCAATGGCGGCCTTaGTCCGCTGGGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDGQWRP*SAGGPV
Trigger: CACCGGACCCCCAGCGGACCAAGGCCGCCATTGACC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGTCAATGGCGGCCTTaGTCCGCTGGGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGQWRP*SAGGPV
Trigger: CACCGGACCCCCAGCGGACCAAGGCCGCCATTGACC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTGCCTGCGCGCACGTTaGCGCCCACGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNCLRAR*RPRPSA
Trigger: GGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCTGCCCCGGCTGAGCTaGCGCTGGCGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSLPRLS*RWRWST
Trigger: AGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGACTCCACGGCCTCCTaGATGTCCCGTGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQDSTAS*MSRALS
Trigger: TGAGAGGGCACGGGACATCCAGGAGGCCGTGGAGTC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGTTGGTGTGGCTaGCCACTCAGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQQGWCG*PLSWAA
Trigger: TGCTGCCCAGCTGAGTGGCCAGCCACACCAACCCTG...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTCCAGCGCGCCGTCTTaGGGAAGACCGCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNSSAPS*GRPHPL
Trigger: GAGGGGGTGCGGTCTTCCCCAAGACGGCGCGCTGGA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR TCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGGGCTGGCGCCCCGCTTaGTGGAGGGCCGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRGWRPA*WRAGSG
Trigger: TCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCC...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCCGCTGGGGGTCCGGTaGCCCATCGGGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLPLGVR*PIGHVQ
Trigger: CTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACAAAGCCGCTGATGCCTaGGCGCACGTTGGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNKAADA*AHVGAH
Trigger: GTGGGCGCCAACGTGCGCGCAGGCATCAGCGGCTTT...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGAGACGAGTGTGGCACTaGCGCTCAGTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGRRVWH*RSVPGL
Trigger: CAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCT...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCTCTGGCCCTGGAGGTaGCCGAAGGCTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEALWPWR*PKARDP
Trigger: AGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGAG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGACAGCTGGCAGGCACTaGTTTCCCTGCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLTAGRH*FPCSRG
Trigger: TCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCGGGAGCGGATCTGCTaGAGCACGCGGTTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNRERIC*STRLKA
Trigger: CGCCTTCAACCGCGTGCTGCAGCAGATCCGCTCCCG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCGGGAGCGGATCTGCTaGAGCACGCGGTTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDRERIC*STRLKA
Trigger: CGCCTTCAACCGCGTGCTGCAGCAGATCCGCTCCCG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATCTTGGTGCGCCGGCTaGTGCTCCCGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPSWCAG*CSRCCR
Trigger: GCGGCAGCAGCGGGAGCAGCAGCCGGCGCACCAAGA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAGCAGTGTCACCGGCTaGCCAGCTGAGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASSVTG*PAESWG
Trigger: GCCCCAGGACTCAGCTGGCCAGCCGGTGACACTGCT...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGCGGCCTTGGTCCGCTaGGGGTCCGGTGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLAALVR*GSGAPS
Trigger: CGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGTGCAGGTGGTCAATaGCGGCCTTGGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGAGGQ*RPWSAG
Trigger: CCCAGCGGACCAAGGCCGCCATTGACCACCTGCACC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGGTGCAGGTGGTCAATaGCGGCCTTGGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGGAGGQ*RPWSAG
Trigger: CCCAGCGGACCAAGGCCGCCATTGACCACCTGCACC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCCCGCAGCACGTCCTTaGGCTGCCGCGAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLPAARP*AAARAR
Trigger: ACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGACACCACGGCGGTGTaGGTGGCCTGTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEADTTAV*VACERP
Trigger: TGGCCTCTCACAGGCCACCCACACCGCCGTGGTGTC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGGCTGGAGACGAGTGTaGCACTGCCGCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGGWRRV*HCRSVP
Trigger: GGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGCTGGAGACGAGTGTaGCACTGCCGCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGWRRV*HCRSVP
Trigger: GGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCACTGCCCCGGCTGAGCTaGCGCTGGCGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPLPRLS*RWRWST
Trigger: AGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAG...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCAGCGCCCGCGCGTTaGCATTCTCCACGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSAAPAR*HSPRPP
Trigger: TGGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGGGCAGGACCTCTCCTaGTACTCAGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLGQDLS*YSAGKT
Trigger: TGTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGGAATGGAAGGGCCCTaGCTTCAGAGAGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLGMEGP*LQREDG
Trigger: CCCATCCTCTCTCTGAAGCCAGGGCCCTTCCATTCC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCGGGGTCACAGACCCTaGGCAGCACTGGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSRGHRP*AALGCE
Trigger: CTCGCAGCCCAGTGCTGCCCAGGGTCTGTGACCCCG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCCAGGGAGCTACTCTTaGTGCGCCGGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDPGSYS*CAGCCS
Trigger: GGAGCAGCAGCCGGCGCACCAAGAGTAGCTCCCTGG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCCAGGCTGCTGTCCTaGGGGGCCTTGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPARLLS*GALRSR
Trigger: CCTGCTGCGCAAGGCCCCCCAGGACAGCAGCCTGGC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGAGCGGGGACGGCACTaGTGCTGGTGCAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSERGRH*CWCRMA
Trigger: CGCCATCCTGCACCAGCACCAGTGCCGTCCCCGCTC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCAGAGAGGCTGCCCTTaGCGCCCTCCACCACGCCGC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLQRGCP*RPPPRR
Trigger: GCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGATGGAGTCCTCCAGGTaGGACTGTCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLMESSR*DCPSLI
Trigger: GATCAAGGAGGGACAGTCTCACCTGGAGGACTCCAT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNAQSGR*AAPPAA
Trigger: AGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCAGCTCCAGCTTGGTaGCCCGGGTCAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSAAPAW*PGSGRT
Trigger: AGTCCTGCCTGACCCGGGTCACCAAGCTGGAGCTGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGAGGGTGGTGCTGGTaGTGCGCAGGCGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGGWCW*CAGVSS
Trigger: TGAAGACACGCCTGCGCATCACCAGCACCACCCTCC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGGAGGGTGGTGCTGGTaGTGCGCAGGCGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGGGWCW*CAGVSS
Trigger: TGAAGACACGCCTGCGCATCACCAGCACCACCCTCC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCTGAGTCCTGGGGCCTaGTGGATCTCTCTAATGGCA +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLLSPGA*WISLMA
Trigger: TGCCATTAGAGAGATCCAGCAGGCCCCAGGACTCAG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGATGCGTGACACCTGCTaGTTGTCCGCGTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQMRDTC*LSALLA
Trigger: GGCCAACAACGCGGACAAGCAGCAGGTGTCACGCAT...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCGCGAGGGCCCGTTCTaGTCAATCTCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNREGPF*SISFRR
Trigger: GCGCCTGAAGGAGATTGAGCAGAACGGGCCCTCGCG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCGCGAGGGCCCGTTCTaGTCAATCTCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGREGPF*SISFRR
Trigger: GCGCCTGAAGGAGATTGAGCAGAACGGGCCCTCGCG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTCCTTCAGCCCCTGCTaGATGTCCCGCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSFSPC*MSRSTS
Trigger: GGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGCTCAGTGCCCGGGCTaGCTCCTCAGGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLAQCPG*LLRGPI
Trigger: GATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCAGACGAGTGTGGCACTaGCGCTCAGTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSRRVWH*RSVPGL
Trigger: CAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGACCACCTGCTGCTGTTaGTGCTGCAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQTTCCC*CCSSSL
Trigger: CAAGCTGGAGCTGCAGCAGCAACAGCAGCAGGTGGT...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGTCCAGCTGTACCACCTaGTGCTGTTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQSSCTT*CCCCCS
Trigger: GCTGCAGCAGCAACAGCAGCAGGTGGTACAGCTGGA...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGGAGGTACACGTTGCTaGCGTCGGCCAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDGGTRC*RRPAAE
Trigger: CTCTGCTGCTGGCCGACGGCAGCAACGTGTACCTCC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCCAGGAGGTACACGTTaGTGCCGTCGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGPGGTR*CRRPAA
Trigger: TGCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCGACCTTGTCCCCGATaGCTTCGGCCTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEARPCPR*LRPPQP
Trigger: TGGCTGAGGAGGCCGAAGGCATCGGGGACAAGGTCG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCCCGCAGCACGTCCTTaGGCTGCCGCGAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVPAARP*AAARAR
Trigger: ACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATGCCTGCGCGCACGTTaGCGCCCACGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPCLRAR*RPRPSA
Trigger: GGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACAGCTGGCGCTGGCGCTaGAGCACTCATCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSWRWR*STHHRC
Trigger: GCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCT...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGACTCCACGGCCTCCTaGATGTCCCGTGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEADSTAS*MSRALS
Trigger: TGAGAGGGCACGGGACATCCAGGAGGCCGTGGAGTC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGACTCCACGGCCTCCTaGATGTCCCGTGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDDSTAS*MSRALS
Trigger: TGAGAGGGCACGGGACATCCAGGAGGCCGTGGAGTC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGGCTGGCCACTCAGCTaGGCAGCAACACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAGWPLS*AATRAP
Trigger: TGGAGCACGTGTTGCTGCCCAGCTGAGTGGCCAGCC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGCTGGCCACTCAGCTaGGCAGCAACACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGWPLS*AATRAP
Trigger: TGGAGCACGTGTTGCTGCCCAGCTGAGTGGCCAGCC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCAGGGTTGGTGTGGCTaGCCACTCAGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNQGWCG*PLSWAA
Trigger: TGCTGCCCAGCTGAGTGGCCAGCCACACCAACCCTG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAGCACAGGGTTGGTGTaGCTGGCCACTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASTGLV*LATQLG
Trigger: GCCCAGCTGAGTGGCCAGCCACACCAACCCTGTGCT...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACAGCACAGGGTTGGTGTaGCTGGCCACTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSTGLV*LATQLG
Trigger: GCCCAGCTGAGTGGCCAGCCACACCAACCCTGTGCT...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTCTGAGCCTGCTCTCTaGCCCTGGAGGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNSEPAL*PWRCPK
Trigger: CTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTCTGAGCCTGCTCTCTaGCCCTGGAGGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGSEPAL*PWRCPK
Trigger: CTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCAGGCCACACCCACCTaGCCTGCAGAGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLQATPT*PAEPSP
Trigger: GGGGCTGGGCTCTGCAGGCCAGGTGGGTGTGGCCTG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGATAGTGGGGCTGGGTaGCTCGGTCCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNDSGAG*LGPTSP
Trigger: GGGAGAAGTGGGACCGAGCCACCCAGCCCCACTATC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCAGGACGGAGAGGAGCTaGGCGGCACAGCGCATCCCT +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSRTERS*AAQRIP
Trigger: AGGGATGCGCTGTGCCGCCCAGCTCCTCTCCGTCCT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGACCGACGGCGGCTGTaGAACAGGTGCTTCAGACCG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEADRRRL*NRCFRP
Trigger: CGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGACCGACGGCGGCTGTaGAACAGGTGCTTCAGACCG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGDRRRL*NRCFRP
Trigger: CGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGCCAGGCTGCTGTCCTaGGGGGCCTTGCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLARLLS*GALRSR
Trigger: CCTGCTGCGCAAGGCCCCCCAGGACAGCAGCCTGGC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGAGCAGTGTCGGTGGTaGAGGAAGAGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSEQCRW*RKSGDG
Trigger: GCCGTCCCCGCTCTTCCTCCACCACCGACACTGCTC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGCACCGGCTGGCCAGCTaGGTCCTGGGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRHRLAS*VLGPAG
Trigger: TCCAGCAGGCCCCAGGACTCAGCTGGCCAGCCGGTG...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR TCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCGGGCACGTCCAGGCTaGTGGGGCCGTCGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVRARPG*WGRRCH
Trigger: GTGACACCGACGGCCCCATCAGCCTGGACGTGCCCG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGATGGAGTCCTCCAGGTaGGACTGTCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQMESSR*DCPSLI
Trigger: GATCAAGGAGGGACAGTCTCACCTGGAGGACTCCAT...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSAQSGR*AAPPAA
Trigger: AGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCAGCTCCAGCTTGGTaGCCCGGGTCAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPAAPAW*PGSGRT
Trigger: AGTCCTGCCTGACCCGGGTCACCAAGCTGGAGCTGC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACATTCTTAAAGGCGGGTaGGGGAGGGGCGAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDILKGG*GRGEKG
Trigger: CCCCTTCTCGCCCCTCCCTCACCCGCCTTTAAGAAT...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR TCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGCCTTGCGCAGCAGGTaGGGGCTGCCACGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGALRSR*GLPRWG
Trigger: GCCCCAGCGTGGCAGCCCTCACCTGCTGCGCAAGGC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGTCGTCGCGAGCCTCCTaGTCAATCTTGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQSSRAS*SILICS
Trigger: CGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGA...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTTGATGCGTGACACCTaGTGCTTGTCCGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLLMRDT*CLSALL
Trigger: CAACAACGCGGACAAGCAGCAGGTGTCACGCATCAA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTCCTTCAGCCCCTGCTaGATGTCCCGCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSSFSPC*MSRSTS
Trigger: GGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGA...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAAAAGCCGCTGATGCCTaGGCGCACGTTGGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPKAADA*AHVGAH
Trigger: GTGGGCGCCAACGTGCGCGCAGGCATCAGCGGCTTT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGAGCACTCATCATCGCTaGCATACTTGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLSTHHR*HTWGWR
Trigger: TCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGAGGAGCACCATACAGTaGATTGGACTTAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLRSTIQ*IGLRAP
Trigger: GGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGATGCTGGCCAGCTCCTaGTTCAGGTTCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQMLASS*FRFVIS
Trigger: CGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCAT...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCCCCATGTCCACCTCTaGTCCACTTGGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAPHVHL*STWPQV
Trigger: CACCTGTGGCCAAGTGGAGCAGAGGTGGACATGGGG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCACTCTGGCCCTGGAGGTaGCCGAAGGCTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPLWPWR*PKARDP
Trigger: AGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGAG...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGAGGCCCCAGCTGTCTaGGGACTGTGTCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLEAPAV*GLCQAP
Trigger: GGGGGCCTGACACAGTCCGCAGACAGCTGGGGCCTC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGGCCGGGAGCGGATCTaGTGCAGCACGCGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPGRERI*CSTRLK
Trigger: CTTCAACCGCGTGCTGCAGCAGATCCGCTCCCGGCC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGCCCCCACTGCTGCTGTaGAGGCTGGCGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRPPLLL*RLAPRL
Trigger: CAAGCGGGGCGCCAGCCTGCACAGCAGCAGTGGGGG...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCCCCCACTGCTGCTGTaGAGGCTGGCGCCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSPPLLL*RLAPRL
Trigger: CAAGCGGGGCGCCAGCCTGCACAGCAGCAGTGGGGG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTGCCGCCCCCACTGCTaGTGTGCAGGCTGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGCRPHC*CAGWRP
Trigger: GGGGCGCCAGCCTGCACAGCAGCAGTGGGGGCGGCA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCTGCTGCCGCCCCCACTaGTGCTGTGCAGGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVCCRPH*CCAGWR
Trigger: GCGCCAGCCTGCACAGCAGCAGTGGGGGCGGCAGCA...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCTCTTGGTGCGCCGGCTaGTGCTCCCGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVSWCAG*CSRCCR
Trigger: GCGGCAGCAGCGGGAGCAGCAGCCGGCGCACCAAGA...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAACGGCACTGGTGCTGGTaGAGGATGGCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGERHWCW*RMAARL
Trigger: CAGCCTGGCCGCCATCCTGCACCAGCACCAGTGCCG...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGCCGTCGGTGTCACCATaGCCGGCGGGGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRPSVSP*PAGRLR
Trigger: CCTGAGCCTCCCCGCCGGCCATGGTGACACCGACGG...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCCGTCGGTGTCACCATaGCCGGCGGGGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVPSVSP*PAGRLR
Trigger: CCTGAGCCTCCCCGCCGGCCATGGTGACACCGACGG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGCGGCCTTGGTCCGCTaGGGGTCCGGTGCCCCATCG +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGAALVR*GSGAPS
Trigger: CGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGATCTTCTGGTGCAGGTaGTCAATGGCGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQIFWCR*SMAALV
Trigger: GACCAAGGCCGCCATTGACCACCTGCACCAGAAGAT...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCCCGCAGCACGTCCTTaGGCTGCCGCGAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGPAARP*AAARAR
Trigger: ACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGACACCACGGCGGTGTaGGTGGCCTGTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPDTTAV*VACERP
Trigger: TGGCCTCTCACAGGCCACCCACACCGCCGTGGTGTC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGCAGCGCCCGCGCGTTaGCATTCTCCACGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEAAPAR*HSPRPP
Trigger: TGGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLLEWTV*AGGQTG
Trigger: TCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGGGGGCAGGAGCTGCTaGAATGGACAGTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAGGRSC*NGQFGQ
Trigger: CTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGATGGTCTTCCTGACTTaGGGCATCCTGAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQMVFLT*GILRVS
Trigger: GCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCAT...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGGTCACAGTCGAGGCTaGGCAGCAAGAGTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDGHSRG*AARVLG
Trigger: CCCAAGGACTCTTGCTGCCCAGCCTCGACTGTGACC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCGCTCCTTCTCATCTaGGGAGTCATGGTCGGACAT +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQALLLI*GVMVGH
Trigger: ATGTCCGACCATGACTCCCCAGATGAGAAGGAGCGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGAGCGGGGACGGCACTaGTGCTGGTGCAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEERGRH*CWCRMA
Trigger: CGCCATCCTGCACCAGCACCAGTGCCGTCCCCGCTC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGAGGACAATGAGCAGTaGGCAGTGTCACCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSEDNEQ*AVSPAG
Trigger: GCCAGCCGGTGACACTGCTCACTGCTCATTGTCCTC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR TCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGTCTCGAACACTTGCTTaGTGCGTGACACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQSRTLA*CVTPAA
Trigger: AGCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGA...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCAGAGAGGCTGCCCTTaGCGCCCTCCACCACGCCGC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGQRGCP*RPPPRR
Trigger: GCGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTG...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTGCTGCTGGGAATCCTaGGACGTCTGGTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEACCWES*DVWCSL
Trigger: AAGGGAGCACCAGACGTCTCAGGATTCCCAGCAGCA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTGCTCCAGCTTCTTGTaGAGCTGGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNCSSFL*SWAMVW
Trigger: CCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCAGCACGTCCTTGGGCTaGCGCGAGGGCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSSTSLG*REGPFC
Trigger: GCAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATCCTTCAGCCCCTGCTaGATGTCCCGCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPSFSPC*MSRSTS
Trigger: GGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAAAAGCCGCTGATGCCTaGGCGCACGTTGGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEKAADA*AHVGAH
Trigger: GTGGGCGCCAACGTGCGCGCAGGCATCAGCGGCTTT...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGCTCAGTGCCCGGGCTaGCTCCTCAGGGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGAQCPG*LLRGPI
Trigger: GATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGGCACTGCCGCTCAGTaGCCGGGCTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGGTAAQ*PGCLLR
Trigger: CCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAAGACGAGTGTGGCACTaGCGCTCAGTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGERRVWH*RSVPGL
Trigger: CAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCT...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGACCACCTGCTGCTGTTaGTGCTGCAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGTTCCC*CCSSSL
Trigger: CAAGCTGGAGCTGCAGCAGCAACAGCAGCAGGTGGT...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTCCAGCTGTACCACCTaGTGCTGTTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNSSCTT*CCCCCS
Trigger: GCTGCAGCAGCAACAGCAGCAGGTGGTACAGCTGGA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTCCAGCTGTACCACCTaGTGCTGTTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGSSCTT*CCCCCS
Trigger: GCTGCAGCAGCAACAGCAGCAGGTGGTACAGCTGGA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCTCTGGCCCTGGAGGTaGCCGAAGGCTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLLWPWR*PKARDP
Trigger: AGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGAG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGAGCTCCACACTAGCTaGTCTGAGCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNELHTS*SEPALW
Trigger: CCAGAGAGCAGGCTCAGAGCAGCTAGTGTGGAGCTC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGAGCTCCACACTAGCTaGTCTGAGCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAELHTS*SEPALW
Trigger: CCAGAGAGCAGGCTCAGAGCAGCTAGTGTGGAGCTC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGACAGCTGGCAGGCACTaGTTTCCCTGCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGTAGRH*FPCSRG
Trigger: TCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGT...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGGCCCCCAAACTTTCTaGTTCAGGGCATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAGPQTF*FRAWAG
Trigger: TCCTGCCCATGCCCTGAAGCAGAAAGTTTGGGGGCC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCAGCTCGTCCGATCTaGACCTCTTCATGGTGTATG +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQAARPI*TSSWCM
Trigger: CATACACCATGAAGAGGTGCAGATCGGACGAGCTGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTCGCCCTGTTGTTGCTaGAGCTCGTCCGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASPCCC*SSSDLH
Trigger: GTGCAGATCGGACGAGCTGCAGCAACAACAGGGCGA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCGGCTGTGGAACAGGTaGTTCAGACCGTGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDRLWNR*FRPWPN
Trigger: GTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGGCCGGGAGCGGATCTaGTGCAGCACGCGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLGRERI*CSTRLK
Trigger: CTTCAACCGCGTGCTGCAGCAGATCCGCTCCCGGCC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGTGCCTGCGCGCACGTTaGCGCCCACGTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRCLRAR*RPRPSA
Trigger: GGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCA...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCAAACTCCCGGGGCTTaGACACCACGGCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLQTPGA*TPRRCG
Trigger: CCCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTGCCATACTTGGGGCTaGAGACGAGTGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNCHTWG*RRVWHC
Trigger: GCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTGCCATACTTGGGGCTaGAGACGAGTGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGCHTWG*RRVWHC
Trigger: GCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCATCGCTGCCATACTTaGGGCTGGAGACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGHRCHT*GWRRVW
Trigger: CCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAAGCTGGCGCTGGCGCTaGAGCACTCATCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPSWRWR*STHHRC
Trigger: GCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCACGGCTGAGCTGGCGCTaGCGCTGGAGCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPRLSWR*RWSTHH
Trigger: ATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCG...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCCTGCTCTCTGGCCCTaGAGGTGCCCGAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLPALWP*RCPKAR
Trigger: CCTAGCCTTCGGGCACCTCCAGGGCCAGAGAGCAGG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCAGGCCACACCCACCTaGCCTGCAGAGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGQATPT*PAEPSP
Trigger: GGGGCTGGGCTCTGCAGGCCAGGTGGGTGTGGCCTG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGAATGGAAGGGCCCTaGCTTCAGAGAGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGMEGP*LQREDG
Trigger: CCCATCCTCTCTCTGAAGCCAGGGCCCTTCCATTCC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGGAATGGAAGGGCCCTaGCTTCAGAGAGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAGMEGP*LQREDG
Trigger: CCCATCCTCTCTCTGAAGCCAGGGCCCTTCCATTCC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGGATCCAAAGGCTAAATaGAATGGAAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLDPKAK*NGRALA
Trigger: AGCCAGGGCCCTTCCATTCCATTTAGCCTTTGGATC...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGGCAGCAAGAGTCCTTaGGCAGTCATTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNGSKSP*AVIAGG
Trigger: CCCTCCTGCAATGACTGCCCAAGGACTCTTGCTGCC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGAGCAGTGTCGGTGGTaGAGGAAGAGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEEQCRW*RKSGDG
Trigger: GCCGTCCCCGCTCTTCCTCCACCACCGACACTGCTC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCAAACTTGTTGCGGATaGGGCTGGCAAACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSQTCCG*GWQTPG
Trigger: CCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEAQSGR*AAPPAA
Trigger: AGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCATGCGTGACACCTGCTaGTTGTCCGCGTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSMRDTC*LSALLA
Trigger: GGCCAACAACGCGGACAAGCAGCAGGTGTCACGCAT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCGCGAGGGCCCGTTCTaGTCAATCTCCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLREGPF*SISFRR
Trigger: GCGCCTGAAGGAGATTGAGCAGAACGGGCCCTCGCG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAGCACGTCCTTGGGCTaGCGCGAGGGCCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGSTSLG*REGPFC
Trigger: GCAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCAGACGAGTGTGGCACTaGCGCTCAGTGCCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVRRVWH*RSVPGL
Trigger: CAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCT...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCTCTGGCCCTGGAGGTaGCCGAAGGCTAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVLWPWR*PKARDP
Trigger: AGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGAG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCGGCTGTGGAACAGGTaGTTCAGACCGTGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSRLWNR*FRPWPN
Trigger: GTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGGAGGTACACGTTGCTaGCGTCGGCCAGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLGGTRC*RRPAAE
Trigger: CTCTGCTGCTGGCCGACGGCAGCAACGTGTACCTCC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGAGCCCTCTGACAGCTaGTGGATTTTTCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GRALASERGWGRTSPGTQEPSDS*WIFQQG
Trigger: TCCTTGCTGAAAAATCCAGCAGCTGTCAGAGGGCTC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGGTCAATGGCGGCCTTaGTCCGCTGGGGGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGGQWRP*SAGGPV
Trigger: CACCGGACCCCCAGCGGACCAAGGCCGCCATTGACC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCGGTGCAGGTGGTCAATaGCGGCCTTGGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVGAGGQ*RPWSAG
Trigger: CCCAGCGGACCAAGGCCGCCATTGACCACCTGCACC...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACATCTTCTGGTGCAGGTaGTCAATGGCGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNIFWCR*SMAALV
Trigger: GACCAAGGCCGCCATTGACCACCTGCACCAGAAGAT...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTGCCATACTTGGGGCTaGAGACGAGTGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSCHTWG*RRVWHC
Trigger: GCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCA...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGACTCCACGGCCTCCTaGATGTCCCGTGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLDSTAS*MSRALS
Trigger: TGAGAGGGCACGGGACATCCAGGAGGCCGTGGAGTC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGCAGCGCCCGCGCGTTaGCATTCTCCACGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGAAPAR*HSPRPP
Trigger: TGGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGCAGCGCCCGCGCGTTaGCATTCTCCACGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGAAPAR*HSPRPP
Trigger: TGGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCAGGGTTGGTGTGGCTaGCCACTCAGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLQGWCG*PLSWAA
Trigger: TGCTGCCCAGCTGAGTGGCCAGCCACACCAACCCTG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPSKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCCTGCTCTCTGGCCCTaGAGGTGCCCGAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVPALWP*RCPKAR
Trigger: CCTAGCCTTCGGGCACCTCCAGGGCCAGAGAGCAGG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGAAGGTGCACAACAGCTaGCAGGCACTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGKVHNS*QALLSL
Trigger: CAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTT...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTCATCTGGGGAGTCATaGTCGGACATACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASSGES*SDIPCC
Trigger: GCAGCAGGGTATGTCCGACCATGACTCCCCAGATGA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGCGCTCCTTCTCATCTaGGGAGTCATGGTCGGACAT +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGALLLI*GVMVGH
Trigger: ATGTCCGACCATGACTCCCCAGATGAGAAGGAGCGC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCCAGGGAGCTACTCTTaGTGCGCCGGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSPGSYS*CAGCCS
Trigger: GGAGCAGCAGCCGGCGCACCAAGAGTAGCTCCCTGG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTCTCGAACACTTGCTTaGTGCGTGACACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGSRTLA*CVTPAA
Trigger: AGCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGCAGCTCCAGCTTGGTaGCCCGGGTCAGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGAAPAW*PGSGRT
Trigger: AGTCCTGCCTGACCCGGGTCACCAAGCTGGAGCTGC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCGGAGGGTGGTGCTGGTaGTGCGCAGGCGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVGGWCW*CAGVSS
Trigger: TGAAGACACGCCTGCGCATCACCAGCACCACCCTCC...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCGCGAGCAGGTGTGCCTaGGTTCCCAGACTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVASRCA*VPRLCS
Trigger: GCTGCAGAGTCTGGGAACTCAGGCACACCTGCTCGC...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR GCA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTGCTCAATCTTGATCTaGTCGGTGATCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLCSILI*SVIFRI
Trigger: GATCCTGAAGATCACCGAGCAGATCAAGATTGAGCA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAAAGCCGCTGATGCCTaGGCGCACGTTGGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGKAADA*AHVGAH
Trigger: GTGGGCGCCAACGTGCGCGCAGGCATCAGCGGCTTT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAGCACTCATCATCGCTaGCATACTTGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASTHHR*HTWGWR
Trigger: TCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCT...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGTCAGGTCGTTGAGCTaGTCCTCCAGCCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLVRSLS*SSSRSY
Trigger: GTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGAC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGAAGGGGGCAGGAGCTaGTGGAATGGACAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPEGGRS*WNGQFG
Trigger: CCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAACCCCATGTCCACCTCTaGTCCACTTGGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEPHVHL*STWPQV
Trigger: CACCTGTGGCCAAGTGGAGCAGAGGTGGACATGGGG...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTTAAATCAGGAGGCTTaGTTCGGGGACCTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGLNQEA*FGDLGW
Trigger: CCAACCCAGGTCCCCGAAGCAAGCCTCCTGATTTAA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAAGCTTCTTGTGCAGCTaGGCGATGGTCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPSFLCS*AMVWAD
Trigger: GTCAGCCCAGACCATCGCCCAGCTGCACAAGAAGCT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCAAACTCCCGGGGCTTaGACACCACGGCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGQTPGA*TPRRCG
Trigger: CCCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTG...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCAGCTGGCGCTGGCGCTaGAGCACTCATCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSSWRWR*STHHRC
Trigger: GCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCAGCTGGCGCTGGCGCTaGAGCACTCATCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVSWRWR*STHHRC
Trigger: GCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCT...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCGGCTGAGCTGGCGCTaGCGCTGGAGCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSRLSWR*RWSTHH
Trigger: ATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGCGGCTGAGCTGGCGCTaGCGCTGGAGCACTCATCAT +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRRLSWR*RWSTHH
Trigger: ATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCG...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGGCTGGCCACTCAGCTaGGCAGCAACACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSGWPLS*AATRAP
Trigger: TGGAGCACGTGTTGCTGCCCAGCTGAGTGGCCAGCC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCAGGGTTGGTGTGGCTaGCCACTCAGCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSQGWCG*PLSWAA
Trigger: TGCTGCCCAGCTGAGTGGCCAGCCACACCAACCCTG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNLEWTV*AGGQTG
Trigger: TCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAACACCTCTGCTCCACTTaGCCACAGGTGCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEHLCST*PQVPAL
Trigger: TAGTGCGGGCACCTGTGGCCAAGTGGAGCAGAGGTG...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCATGGTCTTCCTGACTTaGGGCATCCTGAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSMVFLT*GILRVS
Trigger: GCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCAT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGACCGTGGCCAAACATaGAGCCCTCTGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPDRGQT*SPLTAA
Trigger: AGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGGAGGGTGGTGCTGGTaGTGCGCAGGCGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGGGWCW*CAGVSS
Trigger: TGAAGACACGCCTGCGCATCACCAGCACCACCCTCC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACCAGTTTCAGATACTCTaGCACATTGTCGTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDQFQIL*HIVVAS
Trigger: GCTCGCGACGACAATGTGGCAGAGTATCTGAAACTG...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCAGTTTCAGATACTCTaGCACATTGTCGTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAQFQIL*HIVVAS
Trigger: GCTCGCGACGACAATGTGGCAGAGTATCTGAAACTG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAATGCTCCAGCTTCTTGTaGAGCTGGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGECSSFL*SWAMVW
Trigger: CCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCA...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTCCTTCAGCCCCTGCTaGATGTCCCGCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSFSPC*MSRSTS
Trigger: GGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGGCACTGCCGCTCAGTaGCCGGGCTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLGTAAQ*PGCLLR
Trigger: CCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGGTCAGGTCGTTGAGCTaGTCCTCCAGCCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRVRSLS*SSSRSY
Trigger: GTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGAC...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGTCAGGTCGTTGAGCTaGTCCTCCAGCCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSVRSLS*SSSRSY
Trigger: GTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGAC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAATGCTGGCCAGCTCCTaGTTCAGGTTCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPMLASS*FRFVIS
Trigger: CGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCAT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAACCACCTGCTGCTGTTaGTGCTGCAGCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGETTCCC*CCSSSL
Trigger: CAAGCTGGAGCTGCAGCAGCAACAGCAGCAGGTGGT...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGAAGGGGGCAGGAGCTaGTGGAATGGACAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLEGGRS*WNGQFG
Trigger: CCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCCCCATGTCCACCTCTaGTCCACTTGGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSPHVHL*STWPQV
Trigger: CACCTGTGGCCAAGTGGAGCAGAGGTGGACATGGGG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAACAGCTGGCAGGCACTaGTTTCCCTGCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGETAGRH*FPCSRG
Trigger: TCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGT...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTATTTCTCAGGAAGGTaGACAACAGCTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGYFSGR*TTAGRH
Trigger: GTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTATTTCTCAGGAAGGTaGACAACAGCTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNYFSGR*TTAGRH
Trigger: GTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGGCTGCGAGCAGGTGTaGCTGAGTTCCCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSGCEQV*LSSQTL
Trigger: CAGAGTCTGGGAACTCAGGCACACCTGCTCGCAGCC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAATCCTCGCCCTGTTGTTaGTGCAGCTCGTCCGATCTG +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGESSPCC*CSSSDL
Trigger: CAGATCGGACGAGCTGCAGCAACAACAGGGCGAGGA...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAATCTTCTGGTGCAGGTaGTCAATGGCGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPIFWCR*SMAALV
Trigger: GACCAAGGCCGCCATTGACCACCTGCACCAGAAGAT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGGCTGGCCACTCAGCTaGGCAGCAACACGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGGWPLS*AATRAP
Trigger: TGGAGCACGTGTTGCTGCCCAGCTGAGTGGCCAGCC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAGCACAGGGTTGGTGTaGCTGGCCACTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGSTGLV*LATQLG
Trigger: GCCCAGCTGAGTGGCCAGCCACACCAACCCTGTGCT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAGRRPN*THKEVQ
Trigger: TTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACATCCTGAGGGTCAGCTaGGAGAAGTCCTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDILRVS*EKSLCN
Trigger: GTTACACAAGGACTTCTCCCAGCTGACCCTCAGGAT...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACATCCTGAGGGTCAGCTaGGAGAAGTCCTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNILRVS*EKSLCN
Trigger: GTTACACAAGGACTTCTCCCAGCTGACCCTCAGGAT...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTCTGAGCCTGCTCTCTaGCCCTGGAGGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSEPAL*PWRCPK
Trigger: CTTCGGGCACCTCCAGGGCCAGAGAGCAGGCTCAGA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGGGCAGGACCTCTCCTaGTACTCAGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLGQDLS*YSAGKT
Trigger: TGTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGATCCAAAGGCTAAATaGAATGGAAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDDPKAK*NGRALA
Trigger: AGCCAGGGCCCTTCCATTCCATTTAGCCTTTGGATC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGATCCAAAGGCTAAATaGAATGGAAGGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEADPKAK*NGRALA
Trigger: AGCCAGGGCCCTTCCATTCCATTTAGCCTTTGGATC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGATAGTGGGGCTGGGTaGCTCGGTCCCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGDSGAG*LGPTSP
Trigger: GGGAGAAGTGGGACCGAGCCACCCAGCCCCACTATC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTCTTCATGGTGTATGTaGGTCGGCAAGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSSWCM*VGKGNL
Trigger: CAGATTCCCCTTGCCGACCCACATACACCATGAAGA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCGGTCGTGCAGGGACATaGCGTAGGAGACGCGATGCA +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVGRAGT*RRRRDA
Trigger: TGCATCGCGTCTCCTACGCCATGTCCCTGCACGACC...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGGTCGTGCAGGGACATaGCGTAGGAGACGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSGRAGT*RRRRDA
Trigger: TGCATCGCGTCTCCTACGCCATGTCCCTGCACGACC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGCAGAGCAGTGTCGGTaGTGGAGGAAGAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGAEQCR*WRKSGD
Trigger: GTCCCCGCTCTTCCTCCACCACCGACACTGCTCTGC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
3UTR CAA 72 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGGACACACAAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: TEKGAGAAGMDS*GRRPNWTHKEV
Trigger: GACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCAAACTTGTTGCGGATaGGGCTGGCAAACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVQTCCG*GWQTPG
Trigger: CCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAATGGAGTCCTCCAGGTaGGACTGTCCCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEMESSR*DCPSLI
Trigger: GATCAAGGAGGGACAGTCTCACCTGGAGGACTCCAT...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCACAAACACAGAGACCTaGCACGGAGCTGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSTNTET*HGAERQ
Trigger: CTGTCTTTCAGCTCCGTGTCAGGTCTCTGTGTTTGT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR TCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGACAATCTCGGATGGGTaGGTCACTAAAACGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGTISDG*VTKTLA
Trigger: AGCAAGCGTTTTAGTGACTCACCCATCCGAGATTGT...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGATGCGTGACACCTGCTaGTTGTCCGCGTTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRMRDTC*LSALLA
Trigger: GGCCAACAACGCGGACAAGCAGCAGGTGTCACGCAT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATTGATGCGTGACACCTaGTGCTTGTCCGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPLMRDT*CLSALL
Trigger: CAACAACGCGGACAAGCAGCAGGTGTCACGCATCAA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTTCTTCTCGAACACTTaGTTGATGCGTGACACCTGC +
Preference number: 4 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAFFSNT*LMRDTC
Trigger: GCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGTGCTCCAGCTTCTTGTaGAGCTGGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRCSSFL*SWAMVW
Trigger: CCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCA...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGGAGCTCCACACTAGCTaGTCTGAGCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRELHTS*SEPALW
Trigger: CCAGAGAGCAGGCTCAGAGCAGCTAGTGTGGAGCTC...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAAGGAAATTCTGTGAGTaGCCAGCAGAGGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPRKFCE*PAEGDR
Trigger: TCTGTCCCCCTCTGCTGGCCACTCACAGAATTTCCT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTGCCATACTTGGGGCTaGAGACGAGTGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSCHTWG*RRVWHC
Trigger: GCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCATCGCTGCCATACTTaGGGCTGGAGACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSHRCHT*GWRRVW
Trigger: CCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCATCGCTGCCATACTTaGGGCTGGAGACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVHRCHT*GWRRVW
Trigger: CCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: ANREKVSDRSKYREGGRSGRRPN*THKEVQ
Trigger: TTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGGGGGCAGGAGCTGCTaGAATGGACAGTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGGGRSC*NGQFGQ
Trigger: CTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGACCCTGGGCAGCACTaGGCTGCGAGCAGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLDPGQH*AASRCA
Trigger: GGCACACCTGCTCGCAGCCCAGTGCTGCCCAGGGTC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR TCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCTCTCGAACACTTGCTTaGTGCGTGACACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLSRTLA*CVTPAA
Trigger: AGCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGA...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCAAACTTGTTGCGGATaGGGCTGGCAAACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGQTCCG*GWQTPG
Trigger: CCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTGCTCAATCTTGATCTaGTCGGTGATCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: WLQREDGAGPLLVLSREDCSILI*SVIFRI
Trigger: GATCCTGAAGATCACCGAGCAGATCAAGATTGAGCA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCTCGTCGCGAGCCTCCTaGTCAATCTTGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVSSRAS*SILICS
Trigger: CGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGA...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGTGCTCCAGCTTCTTGTaGAGCTGGGCGATGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGCSSFL*SWAMVW
Trigger: CCAGACCATCGCCCAGCTGCACAAGAAGCTGGAGCA...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCAGCACTCATCATCGCTaGCATACTTGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLSTHHR*HTWGWR
Trigger: TCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCT...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCATGCTGGCCAGCTCCTaGTTCAGGTTCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSMLASS*FRFVIS
Trigger: CGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCAT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTAGCTGTACCACCTGCTaGTGTTGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSCTTC*CCCCSS
Trigger: GGAGCTGCAGCAGCAACAGCAGCAGGTGGTACAGCT...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAGCTGTACCACCTGCTaGTGTTGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGSCTTC*CCCCSS
Trigger: GGAGCTGCAGCAGCAACAGCAGCAGGTGGTACAGCT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTCCAGCTGTACCACCTaGTGCTGTTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSSCTT*CCCCCS
Trigger: GCTGCAGCAGCAACAGCAGCAGGTGGTACAGCTGGA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCCACTTGGCCACAGGTaGCCGCACTATCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGPLGHR*PHYLQV
Trigger: TACCTGGAGATAGTGCGGGCACCTGTGGCCAAGTGG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGAGCTCCACACTAGCTaGTCTGAGCCTGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGELHTS*SEPALW
Trigger: CCAGAGAGCAGGCTCAGAGCAGCTAGTGTGGAGCTC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGACAGCTGGCAGGCACTaGTTTCCCTGCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGTAGRH*FPCSRG
Trigger: TCCCCTAGAGCAGGGAAAGCAGTGCCTGCCAGCTGT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCAGTCCTGGGGCCTGCTaGATCTCTCTAATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSSPGAC*ISLMAA
Trigger: AGCTGCCATTAGAGAGATCCAGCAGGCCCCAGGACT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTAGCTTCTTGTGCAGCTaGGCGATGGTCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSFLCS*AMVWAD
Trigger: GTCAGCCCAGACCATCGCCCAGCTGCACAAGAAGCT...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCAAACTCCCGGGGCTTaGACACCACGGCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLQTPGA*TPRRCG
Trigger: CCCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGGCTGGAGACGAGTGTaGCACTGCCGCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLGWRRV*HCRSVP
Trigger: GGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCATCGCTGCCATACTTaGGGCTGGAGACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGHRCHT*GWRRVW
Trigger: CCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATG...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGGCAGGAGGCCAAACTaGACACACAAAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPGRRPN*THKEVQ
Trigger: TTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAATCCTGAGGGTCAGCTaGGAGAAGTCCTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPILRVS*EKSLCN
Trigger: GTTACACAAGGACTTCTCCCAGCTGACCCTCAGGAT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGATGGTCTTCCTGACTTaGGGCATCCTGAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRMVFLT*GILRVS
Trigger: GCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCAT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGGGCAGGACCTCTCCTaGTACTCAGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGGQDLS*YSAGKT
Trigger: TGTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGAAGGTGCACAACAGCTaGCAGGCACTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRKVHNS*QALLSL
Trigger: CAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCAAGGTGCACAACAGCTaGCAGGCACTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSKVHNS*QALLSL
Trigger: CAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGACCGTGGCCAAACATaGAGCCCTCTGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGDRGQT*SPLTAA
Trigger: AGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGAGGTGCTTCAGACCGTaGCCAAACATGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRRCFRP*PNMEPS
Trigger: AGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTCATCTGGGGAGTCATaGTCGGACATACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSSSGES*SDIPCC
Trigger: GCAGCAGGGTATGTCCGACCATGACTCCCCAGATGA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGTCTCGAACACTTGCTTaGTGCGTGACACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRSRTLA*CVTPAA
Trigger: AGCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGA...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLAQSGR*AAPPAA
Trigger: AGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTCGTCGCGAGCCTCCTaGTCAATCTTGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSSRAS*SILICS
Trigger: CGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGTTGATGCGTGACACCTaGTGCTTGTCCGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRLMRDT*CLSALL
Trigger: CAACAACGCGGACAAGCAGCAGGTGTCACGCATCAA...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGAGGAGCACCATACAGTaGATTGGACTTAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRRSTIQ*IGLRAP
Trigger: GGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCAGGCACTGCTTTCCCTaGTCTAGGGGATTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVRHCFP*SRGFLS
Trigger: AGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGCCT...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCTATTTCTCAGGAAGGTaGACAACAGCTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLYFSGR*TTAGRH
Trigger: GTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATA...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCCAGGAGGTACACGTTaGTGCCGTCGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLPGGTR*CRRPAA
Trigger: TGCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGATCTTCTGGTGCAGGTaGTCAATGGCGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGIFWCR*SMAALV
Trigger: GACCAAGGCCGCCATTGACCACCTGCACCAGAAGAT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGTGCCCATGGGAGGCTaGGATGTGAAAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEVPMGG*DVKRNH
Trigger: ATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCAC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAAGGTGCACAACAGCTaGCAGGCACTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGKVHNS*QALLSL
Trigger: CAGGGAAAGCAGTGCCTGCCAGCTGTTGTGCACCTT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGCCCTCTGACAGCTGCTaGATTTTCTTTAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGPSDSC*IFFKSG
Trigger: TCCTGATTTAAAGAAAATCCAGCAGCTGTCAGAGGG...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR GCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGCAGTTTCAGATACTCTaGCACATTGTCGTCGCGAGC +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRQFQIL*HIVVAS
Trigger: GCTCGCGACGACAATGTGGCAGAGTATCTGAAACTG...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTTTGATGCGTGACACCTaGTGCTTGTCCGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGLMRDT*CLSALL
Trigger: CAACAACGCGGACAAGCAGCAGGTGTCACGCATCAA...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAATTCTTCTCGAACACTTaGTTGATGCGTGACACCTGC +
Preference number: 4 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEFFSNT*LMRDTC
Trigger: GCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAA...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTAGGCACTGCTTTCCCTaGTCTAGGGGATTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGRHCFP*SRGFLS
Trigger: AGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGCCT...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTATTTCTCAGGAAGGTaGACAACAGCTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSYFSGR*TTAGRH
Trigger: GTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTTCCAAGGGTCCCTCCTaGAGAAGTGTGGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSKGPS*RSVASW
Trigger: CCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGA...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTGGAATGGACAGTTTaGGCAGGAGGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGLEWTV*AGGQTG
Trigger: TCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAG...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGGTGCCCATGGGAGGCTaGGATGTGAAAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRVPMGG*DVKRNH
Trigger: ATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCAC...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGATCTGCACCTCTTCATaGTGTATGTGGGTCGGCAAG +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRICTSS*CMWVGK
Trigger: CTTGCCGACCCACATACACCATGAAGAGGTGCAGAT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
3UTR CAA 72 bp GTAGCTATCTCCGAGGTGGGCTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTC +
Preference number: 4 (lower is better)
Translates to: VAISEVGSFLGK*RQSPLLLFLMV
Trigger: GACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCCACCTCGGAGATAGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCCTTGGACTTCATCTTaGCAGTGCCAGCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVPWTSS*QCQQEI
Trigger: AATTTCCTGCTGGCACTGTCAAGATGAAGTCCAAGG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR TCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCAAACTTGTTGCGGATaGGGCTGGCAAACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLQTCCG*GWQTPG
Trigger: CCCGGGAGTTTGCCAGCCTCATCCGCAACAAGTTTG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR TCA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGAAACATGGAGCCCTCTaGCAGCTGCTGGATTTTCTT +
Preference number: 4 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRKHGAL*QLLDFL
Trigger: AAGAAAATCCAGCAGCTGTCAGAGGGCTCCATGTTT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR TCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTTGCTGCTGGGAATCCTaGGACGTCTGGTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLCCWES*DVWCSL
Trigger: AAGGGAGCACCAGACGTCTCAGGATTCCCAGCAGCA...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCTGCTCAATCTTGATCTaGTCGGTGATCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: FILTISTRENRSYLRGGLCSILI*SVIFRI
Trigger: GATCCTGAAGATCACCGAGCAGATCAAGATTGAGCA...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCTTCTTCTCGAACACTTaGTTGATGCGTGACACCTGC +
Preference number: 4 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVFFSNT*LMRDTC
Trigger: GCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAA...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTTCTTCTCGAACACTTaGTTGATGCGTGACACCTGC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSFFSNT*LMRDTC
Trigger: GCAGGTGTCACGCATCAAGCAAGTGTTCGAGAAGAA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGCTGTACCACCTGCTaGTGTTGCTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSCTTC*CCCCSS
Trigger: GGAGCTGCAGCAGCAACAGCAGCAGGTGGTACAGCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGAAGGGGGCAGGAGCTaGTGGAATGGACAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLEGGRS*WNGQFG
Trigger: CCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGCTTCTTGTGCAGCTaGGCGATGGTCTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSFLCS*AMVWAD
Trigger: GTCAGCCCAGACCATCGCCCAGCTGCACAAGAAGCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGATCCTGAGGGTCAGCTaGGAGAAGTCCTTGTGTAAC +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGILRVS*EKSLCN
Trigger: GTTACACAAGGACTTCTCCCAGCTGACCCTCAGGAT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGTGCCCATGGGAGGCTaGGATGTGAAAAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGVPMGG*DVKRNH
Trigger: ATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCAC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTGCTCAATCTTGATCTaGTCGGTGATCTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSCSILI*SVIFRI
Trigger: GATCCTGAAGATCACCGAGCAGATCAAGATTGAGCA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTTCGTCGCGAGCCTCCTaGTCAATCTTGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSSRAS*SILICS
Trigger: CGAGCAGATCAAGATTGAGCAGGAGGCTCGCGACGA...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTATGCTGGCCAGCTCCTaGTTCAGGTTCGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLMLASS*FRFVIS
Trigger: CGAGATGACGAACCTGAAGCAGGAGCTGGCCAGCAT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTATGGTCTTCCTGACTTaGGGCATCCTGAGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLMVFLT*GILRVS
Trigger: GCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCAT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCCTTATCGACCTGTGTaGGCACTGTTTCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLPYRPV*ALFPEA
Trigger: GGCTTCGGGAAACAGTGCCCACACAGGTCGATAAGG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGGTGCTTCAGACCGTaGCCAAACATGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLRCFRP*PNMEPS
Trigger: AGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGCACTCATCATCGCTaGCATACTTGGGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSTHHR*HTWGWR
Trigger: TCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGGAGCACCATACAGTaGATTGGACTTAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLRSTIQ*IGLRAP
Trigger: GGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR GCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGGCACTGCTTTCCCTaGTCTAGGGGATTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLRHCFP*SRGFLS
Trigger: AGAGAGGAATCCCCTAGAGCAGGGAAAGCAGTGCCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CCA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCCCTCTGACAGCTGCTaGATTTTTCAGCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGPSDSC*IFQQGK
Trigger: TTTTCCTTGCTGAAAAATCCAGCAGCTGTCAGAGGG...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR TCA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCCTCTTATATTCATATaGGGCCTGGGGTCTAAATTA +
Preference number: 4 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGPLIFI*GLGSKL
Trigger: TAATTTAGACCCCAGGCCTCATATGAATATAAGAGG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CCA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTGCCTTGGTTATAGCTTaGAATAGTTCATTTCGACCT +
Preference number: 4 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLALVIA*NSSFRP
Trigger: AGGTCGAAATGAACTATTCCAAGCTATAACCAAGGC...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS GCA 90 bp GTGCGCCGGCTGCTGCTCCCGCTGCTGCCGCCCCCACTGCTGCTGTaGAGGCTGGCGCCCCGCTTGATGGAGGGCCGGGAGCGGATCTGC +
Preference number: 5 (lower is better)
Translates to: VRRLLLPLLPPPLLL*RLAPRLMEGRERIC
Trigger: GCAGATCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCTGCACAGCAGCAGTGGGGGCGGCAGCAGCGGGAGCAGCAGCCGGCGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS GCA 90 bp TGCAGGCTGGCGCCCCGCTTGATGGAGGGCCGGGAGCGGATCTGCTaGAGCACGCGGTTGAAGGCGGTGGGCCGGGCGGGCAGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: CRLAPRLMEGRERIC*STRLKAVGRAGRSC
Trigger: GCACGACCTGCCCGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGCAGATCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS GCA 90 bp CTGTGCAGGCTGGCGCCCCGCTTGATGGAGGGCCGGGAGCGGATCTaGTGCAGCACGCGGTTGAAGGCGGTGGGCCGGGCGGGCAGGTCG +
Preference number: 5 (lower is better)
Translates to: LCRLAPRLMEGRERI*CSTRLKAVGRAGRS
Trigger: CGACCTGCCCGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGCAGATCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCTGCACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS TCA 90 bp CTTGCTTCGGGGACCTGGGTTGGGCGCCGCGGCAGCGCCGGCGTCTaGAGTTGGCCCGCCAGCAGAGTTAGCACCCGTGGTCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LASGTWVGRRGSAGV*SWPASRVSTRGLPR
Trigger: CCTGGGGAGACCACGGGTGCTAACTCTGCTGGCGGGCCAACTTCAGACGCCGGCGCTGCCGCGGCGCCCAACCCAGGTCCCCGAAGCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS GCA 90 bp CTGGTGCAGGTGGTCAATGGCGGCCTTGGTCCGCTGGGGGTCCGGTaGCCCATCGGGCACGTCCAGGCTGATGGGGCCGTCGGTGTCACC +
Preference number: 5 (lower is better)
Translates to: LVQVVNGGLGPLGVR*PIGHVQADGAVGVT
Trigger: GGTGACACCGACGGCCCCATCAGCCTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCACCTGCACCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 90 bp CTGATGCCTGCGCGCACGTTGGCGCCCACGTCCTTCAGCCCCTGCTaGATGTCCCGCAGCACGTCCTTGGGCTGCCGCGAGGGCCCGTTC +
Preference number: 5 (lower is better)
Translates to: LMPARTLAPTSFSPC*MSRSTSLGCREGPF
Trigger: GAACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCATCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CCA 90 bp CCCAGCTGTCTGCGGACTGTGTCAGGCCCCCGGGGTCACAGACCCTaGGCAGCACTGGGCTGCGAGCAGGTGTGCCTGAGTTCCCAGACT +
Preference number: 5 (lower is better)
Translates to: PSCLRTVSGPRGHRP*AALGCEQVCLSSQT
Trigger: AGTCTGGGAACTCAGGCACACCTGCTCGCAGCCCAGTGCTGCCCAGGGTCTGTGACCCCGGGGGCCTGACACAGTCCGCAGACAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGAGCAGCGCCCGCGCGTaGGCATTCTCCACGCCCTCC +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLSSARA*AFSTPS
Trigger: GGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGCT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS GCA 90 bp CTGCCCCGGCTGAGCTGGCGCTGGCGCTGGAGCACTCATCATCGCTaGCATACTTGGGGCTGGAGACGAGTGTGGCACTGCCGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: LPRLSWRWRWSTHHR*HTWGWRRVWHCRSV
Trigger: CACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTGGTCAATGGCGGCCTaGGTCCGCTGGGGGTCCGGT +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLWSMAA*VRWGSG
Trigger: ACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACTCCCGCAGCACGTCCTaGGGCTGCCGCGAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNSRSTS*GCREGP
Trigger: CGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGA...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTCCCGCAGCACGTCCTaGGGCTGCCGCGAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSRSTS*GCREGP
Trigger: CGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAGGCTGGCGCCCCGCTaGATGGAGGGCCGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEARLAPR*MEGRER
Trigger: CCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCT...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCAAACTCCCGGGGCTaGGACACCACGGCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GRALASERGWGRTSPGTQANSRG*DTTAVW
Trigger: CCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS TCA 90 bp CTTATCGACCTGTGTGGGCACTGTTTCCCGAAGCCGTGCCGGCGATaGGGTACCCGGGGCTCTGAGGCCCCAGCTGTCTGCGGACTGTGT +
Preference number: 5 (lower is better)
Translates to: LIDLCGHCFPKPCRR*GTRGSEAPAVCGLC
Trigger: ACACAGTCCGCAGACAGCTGGGGCCTCAGAGCCCCGGGTACCTCATCGCCGGCACGGCTTCGGGAAACAGTGCCCACACAGGTCGATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS GCA 90 bp ACTCATCATCGCTGCCATACTTGGGGCTGGAGACGAGTGTGGCACTaGCGCTCAGTGCCCGGGCTGCCTCCTCAGGGGGCCCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: THHRCHTWGWRRVWH*RSVPGLPPQGAHLP
Trigger: TGGAAGATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CCA 90 bp GGGAGCGAAGACAGGTCACAGTCGAGGCTGGGCAGCAAGAGTCCTTaGGCAGTCATTGCAGGAGGGAGAAGGGAGACAACCCCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: GSEDRSQSRLGSKSP*AVIAGGRRETTPGP
Trigger: GGGGCCGGGGGTTGTCTCCCTTCTCCCTCCTGCAATGACTGCCCAAGGACTCTTGCTGCCCAGCCTCGACTGTGACCTGTCTTCGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCCAGAGAGGCTGCCCTaGACGCCCTCCACCACGCCG +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAPERLP*TPSTTP
Trigger: CGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACCCAGAGAGGCTGCCCTaGACGCCCTCCACCACGCCG +
Preference number: 5 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNPERLP*TPSTTP
Trigger: CGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGG...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGAGCTCAGTCAGGTCGTaGAGCTGCTCCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLSSVRS*SCSSSR
Trigger: GCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGATCACGTTGATGAACTaGCCCAGCAGCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLITLMN*PSSARA
Trigger: CGCGCGGGCGCTGCTGGGCAAGTTCATCAACGTGAT...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS GCA 90 bp GTCTGGTGCTCCCTTTCCCGAGACCGACGGCGGCTGTGGAACAGGTaGTTCAGACCGTGGCCAAACATGGAGCCCTCTGACAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VWCSLSRDRRRLWNR*FRPWPNMEPSDSCW
Trigger: CCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAGGGAGCACCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGCGTGACACCTGCTGCTaGTCCGCGTTGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLRDTCC*SALLAS
Trigger: ACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACG...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCCAGAGAGGCTGCCCTaGACGCCCTCCACCACGCCG +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSPERLP*TPSTTP
Trigger: CGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACGCAAACTCCCGGGGCTaGGACACCACGGCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNANSRG*DTTAVW
Trigger: CCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGC...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCAGCAGCGCCCGCGCGTaGGCATTCTCCACGCCCTCC +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSSSARA*AFSTPS
Trigger: GGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGCT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATGCTGCAGCACGCGGTaGAAGGCGGTGGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPCCSTR*KAVGRA
Trigger: CGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGCA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCTCCCGCAGCACGTCCTaGGGCTGCCGCGAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVSRSTS*GCREGP
Trigger: CGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGA...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTGCTGCAGCTCCAGCTaGGTGACCCGGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: WLQREDGAGPLLVLSREDCCSSS*VTRVRQ
Trigger: CTGCCTGACCCGGGTCACCAAGCTGGAGCTGCAGCA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTGCTGCAGCTCCAGCTaGGTGACCCGGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEACCSSS*VTRVRQ
Trigger: CTGCCTGACCCGGGTCACCAAGCTGGAGCTGCAGCA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTGCTGCAGCTCCAGCTaGGTGACCCGGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGCCSSS*VTRVRQ
Trigger: CTGCCTGACCCGGGTCACCAAGCTGGAGCTGCAGCA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTCCAGGGAGCTACTCTaGGTGCGCCGGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSRELL*VRRLLL
Trigger: GAGCAGCAGCCGGCGCACCAAGAGTAGCTCCCTGGA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCCAGGAGGTACACGTaGCTGCCGTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSARRYT*LPSASS
Trigger: GCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS CCA 90 bp CCTCGCCCTGTTGTTGCTGCAGCTCGTCCGATCTGCACCTCTTCATaGTGTATGTGGGTCGGCAAGGGGAATCTGTCCTTCCAGCGCGCC +
Preference number: 5 (lower is better)
Translates to: PRPVVAAARPICTSS*CMWVGKGNLSFQRA
Trigger: GGCGCGCTGGAAGGACAGATTCCCCTTGCCGACCCACATACACCATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAACAGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 90 bp GGCGTAGGAGACGCGATGCATCTCCGGAGAGCGCTCCTTCTCATCTaGGGAGTCATGGTCGGACATACCCTGCTGCTGCTGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GVGDAMHLRRALLLI*GVMVGHTLLLLMLL
Trigger: CAGCAGCATCAGCAGCAGCAGGGTATGTCCGACCATGACTCCCCAGATGAGAAGGAGCGCTCTCCGGAGATGCATCGCGTCTCCTACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTCAGCACTGCCAAACTaGTTGCGGATGAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLSALPN*LRMRLA
Trigger: TGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: GRALASERGWGRTSPGTQAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAGGCTGGCGCCCCGCTaGATGGAGGGCCGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGRLAPR*MEGRER
Trigger: CCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTCCAGGGAGCTACTCTaGGTGCGCCGGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSSRELL*VRRLLL
Trigger: GAGCAGCAGCCGGCGCACCAAGAGTAGCTCCCTGGA...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS CCA 90 bp GTTGTTGCTGCAGCTCGTCCGATCTGCACCTCTTCATGGTGTATGTaGGTCGGCAAGGGGAATCTGTCCTTCCAGCGCGCCGTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: VVAAARPICTSSWCM*VGKGNLSFQRAVLG
Trigger: CCCCAAGACGGCGCGCTGGAAGGACAGATTCCCCTTGCCGACCCACATACACCATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 90 bp AAGTTCCTTCCTTGGGCTGACATCTCGCTCAGCTGGACGGTGAGCTaGCTTGAGAAGCCTGAGCCTGCAGTCCCTGTGGCAGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: KFLPWADISLSWTVS*LEKPEPAVPVAVPA
Trigger: TGCCGGAACTGCCACAGGGACTGCAGGCTCAGGCTTCTCAAGCCAGCTCACCGTCCAGCTGAGCGAGATGTCAGCCCAAGGAAGGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS CCA 90 bp CTTTCCCGAGACCGACGGCGGCTGTGGAACAGGTGCTTCAGACCGTaGCCAAACATGGAGCCCTCTGACAGCTGCTGGATTTTCTGCGCT +
Preference number: 5 (lower is better)
Translates to: LSRDRRRLWNRCFRP*PNMEPSDSCWIFCA
Trigger: AGCGCAGAAAATCCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS-3UTR CAA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCATGCCTGCGCGCACGTaGGCGCCCACGTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FILTISTRENRSYLRGGLMPART*APTSFS
Trigger: GCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCAT...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCCCAGAGAGGCTGCCCTaGACGCCCTCCACCACGCCG +
Preference number: 5 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVPERLP*TPSTTP
Trigger: CGGCGTGGTGGAGGGCGTCAAGGGCAGCCTCTCTGG...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCAGCTCAGTCAGGTCGTaGAGCTGCTCCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSSSVRS*SCSSSR
Trigger: GCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGAGCAGCGCCCGCGCGTaGGCATTCTCCACGCCCTCC +
Preference number: 5 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRSSARA*AFSTPS
Trigger: GGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGCT...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTTTAAATCAGGAGGCTaGCTTCGGGGACCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLFKSGG*LRGPGL
Trigger: CAACCCAGGTCCCCGAAGCAAGCCTCCTGATTTAAA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGTGCTGCAGCACGCGGTaGAAGGCGGTGGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGCCSTR*KAVGRA
Trigger: CGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGCA...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS GCA 90 bp CAGCTCCATCCTCCTCGCCCTGTTGTTGCTGCAGCTCGTCCGATCTaGACCTCTTCATGGTGTATGTGGGTCGGCAAGGGGAATCTGTCC +
Preference number: 5 (lower is better)
Translates to: QLHPPRPVVAAARPI*TSSWCMWVGKGNLS
Trigger: GGACAGATTCCCCTTGCCGACCCACATACACCATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAACAGGGCGAGGAGGATGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCTGGTCAATGGCGGCCTaGGTCCGCTGGGGGTCCGGT +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSWSMAA*VRWGSG
Trigger: ACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCA...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCTGGTCAATGGCGGCCTaGGTCCGCTGGGGGTCCGGT +
Preference number: 5 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVWSMAA*VRWGSG
Trigger: ACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCA...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GGAAGGGCCCTGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGGCCTCCTGCTCAATCTaGATCTGCTCGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: GRALASERGWGRTSPGTQASCSI*ICSVIF
Trigger: GAAGATCACCGAGCAGATCAAGATTGAGCAGGAGGC...CTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCAGGGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAAACAGATACTCTGCCACATaGTCGTCGCGAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TEKGAGAAGMDSLGRRPNRYSAT*SSRASC
Trigger: GCAGGAGGCTCGCGACGACAATGTGGCAGAGTATCT...GTTTGGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCATGCCTGCGCGCACGTaGGCGCCCACGTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSMPART*APTSFS
Trigger: GCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCAT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGCACCATACAGTGCATaGGACTTAGGGCTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGAPYSA*DLGLPS
Trigger: GCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAATCACGTTGATGAACTaGCCCAGCAGCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPITLMN*PSSARA
Trigger: CGCGCGGGCGCTGCTGGGCAAGTTCATCAACGTGAT...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAGGGGCGTGATGAAGTaGGCGATGGTGGACACGAAC +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEARGVMK*AMVDTN
Trigger: GTTCGTGTCCACCATCGCCAACTTCATCACGCCCCT...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS TCA 90 bp GCTTCAGGTTCGTCATCTCGTTCTGATGAAGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCTCGTACCTGTAGCGCTCCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: ASGSSSRSDEAQSGR*AAPPAARTCSAPPA
Trigger: TGCAGGAGGAGCGCTACAGGTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGAACCTGAAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 90 bp CTGGCCAGGCCAGGCCACACTTGGCTGAGAAGCTCGAGAGGAGGATaGCGGTCAGAGAGACATCAGGTCTGTGTTGGTGACTTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LARPGHTWLRSSRGG*RSERHQVCVGDLSL
Trigger: AAGAGACAAGTCACCAACACAGACCTGATGTCTCTCTGACCGGCATCCTCCTCTCGAGCTTCTCAGCCAAGTGTGGCCTGGCCTGGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS CCA 90 bp TCCAAGGCATCTAAGTTCCTTCCTTGGGCTGACATCTCGCTCAGCTaGACGGTGAGCTGGCTTGAGAAGCCTGAGCCTGCAGTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: SKASKFLPWADISLS*TVSWLEKPEPAVPV
Trigger: CACAGGGACTGCAGGCTCAGGCTTCTCAAGCCAGCTCACCGTCCAGCTGAGCGAGATGTCAGCCCAAGGAAGGAACTTAGATGCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS CCA 90 bp CTTTCCCGAGACCGACGGCGGCTGTGGAACAGGTGCTTCAGACCGTaGCCAAACATGGAGCCCTCTGACAGCTGCTGGATTTTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: LSRDRRRLWNRCFRP*PNMEPSDSCWIFQQ
Trigger: TTGCTGAAAAATCCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGTGGTCAATGGCGGCCTaGGTCCGCTGGGGGTCCGGT +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGWSMAA*VRWGSG
Trigger: ACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCA...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGCAAACTCCCGGGGCTaGGACACCACGGCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGANSRG*DTTAVW
Trigger: CCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTGCAAACTCCCGGGGCTaGGACACCACGGCGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGANSRG*DTTAVW
Trigger: CCACACCGCCGTGGTGTCCAAGCCCCGGGAGTTTGC...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGTGCTGCAGCTCCAGCTaGGTGACCCGGGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRCCSSS*VTRVRQ
Trigger: CTGCCTGACCCGGGTCACCAAGCTGGAGCTGCAGCA...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCGCTGGAATGGACAGTTaGGGCAGGAGGCCAAACTGG +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSAGMDS*GRRPNW
Trigger: CCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCAGC...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCAATGGTCTTCCTGACTaGGGGCATCCTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEANGLPD*GHPEGQ
Trigger: CTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATT...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGGCCAGGAGGTACACGTaGCTGCCGTCGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGARRYT*LPSASS
Trigger: GCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGGC...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATCTCCCTTATCGACCTaGTCCCCGATGCCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPSPLST*SPMPSA
Trigger: GGCCGAAGGCATCGGGGACAAGGTCGATAAGGGAGA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCGCCTCCTGCTCAATCTaGATCTGCTCGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAASCSI*ICSVIF
Trigger: GAAGATCACCGAGCAGATCAAGATTGAGCAGGAGGC...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACGCCTCCTGCTCAATCTaGATCTGCTCGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: WLQREDGAGPLLVLSREDASCSI*ICSVIF
Trigger: GAAGATCACCGAGCAGATCAAGATTGAGCAGGAGGC...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCCGTGACACCTGCTGCTaGTCCGCGTTGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FILTISTRENRSYLRGGLRDTCC*SALLAS
Trigger: ACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACG...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTTCTCGAACACTTGCTaGATGCGTGACACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WLQREDGAGPLLVLSREDFSNTC*MRDTCC
Trigger: GCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGAA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCTCAGCACTGCCAAACTaGTTGCGGATGAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSSALPN*LRMRLA
Trigger: TGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGA...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCACCATACAGTGCATaGGACTTAGGGCTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPAPYSA*DLGLPS
Trigger: GCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGC...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCATCACGTTGATGAACTaGCCCAGCAGCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVITLMN*PSSARA
Trigger: CGCGCGGGCGCTGCTGGGCAAGTTCATCAACGTGAT...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCATCACGTTGATGAACTaGCCCAGCAGCGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSITLMN*PSSARA
Trigger: CGCGCGGGCGCTGCTGGGCAAGTTCATCAACGTGAT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCAATGGTCTTCCTGACTaGGGGCATCCTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSNGLPD*GHPEGQ
Trigger: CTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATT...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEASFLGK*RQSPLL
Trigger: GAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGA...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp CTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCAGCTGGGTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LDTQRSPRVPPGEVWPAGSFLGK*RQSPLL
Trigger: GAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGA...CCCAGCTGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAATCCTCCTCGCCCTGTaGTTGCTGCAGCTCGTCCGA +
Preference number: 5 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEILLAL*LLQLVR
Trigger: TCGGACGAGCTGCAGCAACAACAGGGCGAGGAGGAT...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAATCTCCCTTATCGACCTaGTCCCCGATGCCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGESPLST*SPMPSA
Trigger: GGCCGAAGGCATCGGGGACAAGGTCGATAAGGGAGA...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358024.8
ENST00000545499.5
CDS TCA 90 bp GCTTCAGGTTCGTCATCTCGTTCTGATGAAGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCTCGTACAGCAGTCTCTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASGSSSRSDEAQSGR*AAPPAARTAVSSSL
Trigger: CAAGGAGGAAGAGACTGCTGTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGAACCTGAAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468846.5
CDS GCA 90 bp CAGCTCTCAATTTCACAAAGCCACGCCACCCTTTTAGCCAACGCGTaGAGAGCTCCTCACTCTGAGAACAGACTTCTCCCCAGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLSISQSHATLLANA*RAPHSENRLLPSGG
Trigger: GCCTCCACTGGGGAGAAGTCTGTTCTCAGAGTGAGGAGCTCTGCACGCGTTGGCTAAAAGGGTGGCGTGGCTTTGTGAAATTGAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS GCA 90 bp ACAGCCATGAGAGGTGGGCCTGGCTGCCTCTACATGCAGAGTGTCTaGTCATTAAGGGCTGAACAACCTGGTTCATTCTGCTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TAMRGGPGCLYMQSV*SLRAEQPGSFCWAP
Trigger: AGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCAGACACTCTGCATGTAGAGGCAGCCAGGCCCACCTCTCATGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS CCA 90 bp CTTTCCCGAGACCGACGGCGGCTGTGGAACAGGTGCTTCAGACCGTaGCCAAACATGGAGCCCTCTGACAGCTGCTGGATTTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: LSRDRRRLWNRCFRP*PNMEPSDSCWIFFK
Trigger: TTTAAAGAAAATCCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp GGGCTCTTTCCTAGGAAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTAGCTCAGTCAGGTCGTaGAGCTGCTCCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GLFPRKVEAEPSPPILNGSSVRS*SCSSSR
Trigger: GCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCT...ACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGCAGCGCCCGCGCGTaGGCATTCTCCACGCCCTCC +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSSARA*AFSTPS
Trigger: GGAGGGCGTGGAGAATGCCAACGCGCGGGCGCTGCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCAGGGGCGTGATGAAGTaGGCGATGGTGGACACGAAC +
Preference number: 5 (lower is better)
Translates to: FILTISTRENRSYLRGGLRGVMK*AMVDTN
Trigger: GTTCGTGTCCACCATCGCCAACTTCATCACGCCCCT...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCCTCCTCGCCCTGTTGTaGCTGCAGCTCGTCCGATCT +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSLLALL*LQLVRS
Trigger: AGATCGGACGAGCTGCAGCAACAACAGGGCGAGGAG...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp TCTGGCCCTGGAGGTGCCCGAAGGCTAGGGACCCTCCCATCCCTGTGTTCTCTGTTTTTGGTTAGCATCTaGGATTTCTCCAGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SGPGGARRLGTLPSLCSLFLVSI*DFSSPL
Trigger: CAAAGGGCTGGAGAAATCCAAGATGCTAACCAAAAA...CAGAGAACACAGGGATGGGAGGGTCCCTAGCCTTCGGGCACCTCCAGGGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR CAA 90 bp TGGCTTCAGAGAGAGGATGGGGCAGGACCTCTCCTGGTACTCAGCAGGGAAGACTCCTTGGACTTCATCTaGACAGTGCCAGCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: WLQREDGAGPLLVLSREDSLDFI*TVPAGN
Trigger: ATTTCCTGCTGGCACTGTCAAGATGAAGTCCAAGGA...GTCTTCCCTGCTGAGTACCAGGAGAGGTCCTGCCCCATCCTCTCTCTGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329800.7
CDS-3UTR CAA 90 bp ATTCTTAATGGTCTTCCTGACTTGGGGCATCCTGAGGGTCAGCTGGGAGAAGTCAGATACTCTGCCACATaGTCGTCGCGAGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ILNGLPDLGHPEGQLGEVRYSAT*SSRASC
Trigger: GCAGGAGGCTCGCGACGACAATGTGGCAGAGTATCT...GACTTCTCCCAGCTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATTAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGCGTGACACCTGCTGCTaGTCCGCGTTGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGRDTCC*SALLAS
Trigger: ACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACG...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp GCCAAACTGGACACACAAAGAAGTCCAAGGGTCCCTCCTGGAGAAGTGTGGCCATTCTCGAACACTTGCTaGATGCGTGACACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AKLDTQRSPRVPPGEVWPFSNTC*MRDTCC
Trigger: GCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGAA...TGGCCACACTTCTCCAGGAGGGACCCTTGGACTTCTTTGTGTGTCCAGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTATGCCTGCGCGCACGTaGGCGCCCACGTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLMPART*APTSFS
Trigger: GCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCAT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAATCAGCACTGCCAAACTaGTTGCGGATGAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGESALPN*LRMRLA
Trigger: TGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGA...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGCACCATACAGTGCATaGGACTTAGGGCTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSAPYSA*DLGLPS
Trigger: GCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCAGGGGCGTGATGAAGTaGGCGATGGTGGACACGAAC +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSRGVMK*AMVDTN
Trigger: GTTCGTGTCCACCATCGCCAACTTCATCACGCCCCT...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AGTGCCCATGGGAGGCTGGGATGTGAAAAGAAACCATACACAACACTCCAGAGCGTCCTTGGGCAGTCATaGCAGGAGGGAGAAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SAHGRLGCEKKPYTTLQSVLGQS*QEGEGR
Trigger: TCTCCCTTCTCCCTCCTGCAATGACTGCCCAAGGAC...GCTCTGGAGTGTTGTGTATGGTTTCTTTTCACATCCCAGCCTCCCATGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp GCCAACAGGGAGAAGGTGTCAGACAGAAGCAAGTACAGAGAAGGGGGCAGGAGCCGAGAAGGGGGAGCCTaGGTTATAGCTTGGAATAGT +
Preference number: 5 (lower is better)
Translates to: ANREKVSDRSKYREGGRSREGGA*VIAWNS
Trigger: ACTATTCCAAGCTATAACCAAGGCTCCCCCTTCTCG...GCTCCTGCCCCCTTCTCTGTACTTGCTTCTGTCTGACACCTTCTCCCTGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTTTCCAGCGCGCCGTCTaGGGGAAGACCGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLFQRAV*GKTAPP
Trigger: AGGGGGTGCGGTCTTCCCCAAGACGGCGCGCTGGAA...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS TCA 90 bp TGGGCCTGGCTGCCTCTACATGCAGAGTGTCTGCTCATTAAGGGCTaGACAACCTGGTTCATTCTGCTGGGCTCCTCCAGCTCTCAATTT +
Preference number: 5 (lower is better)
Translates to: WAWLPLHAECLLIKG*TTWFILLGSSSSQF
Trigger: AAATTGAGAGCTGGAGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCAGACACTCTGCATGTAGAGGCAGCCAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS TCA 90 bp CTGTCCACTAGCTGTGTGTCCATGAGTGAGTTCCCTTCATCCTTCTaGGCCTCAGCTTGCTCATCTGGACTCCATGGCTGCCAAACCATG +
Preference number: 5 (lower is better)
Translates to: LSTSCVSMSEFPSSF*ASACSSGLHGCQTM
Trigger: CATGGTTTGGCAGCCATGGAGTCCAGATGAGCAAGCTGAGGCTCAGAAGGATGAAGGGAACTCACTCATGGACACACAGCTAGTGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS-3UTR CAA 90 bp AAGTACAGAGAAGGGGGCAGGAGCTGCTGGAATGGACAGTTTGGGCAGGAGGCCCCTGCTGTCCACTTTTaGGTTAGCATCTTGGATTTC +
Preference number: 5 (lower is better)
Translates to: KYREGGRSCWNGQFGQEAPAVHF*VSILDF
Trigger: GAAATCCAAGATGCTAACCAAAAAGTGGACAGCAGG...GGCCTCCTGCCCAAACTGTCCATTCCAGCAGCTCCTGCCCCCTTCTCTGTACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS GCA 90 bp ATGCAGAGTGTCTGCTCATTAAGGGCTGAACAACCTGGTTCATTCTaGTGGGCTCCTCCAGCTCTCAATTTCACAAAGCCACGCCACCCT +
Preference number: 5 (lower is better)
Translates to: MQSVCSLRAEQPGSF*WAPPALNFTKPRHP
Trigger: AGGGTGGCGTGGCTTTGTGAAATTGAGAGCTGGAGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCAGACACTCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS-3UTR CAA 90 bp TGGAATGGACAGTTTGGGCAGGAGGCCAAACTGGACACACAAAGAAGTCCAAGGTTCTCGAACACTTGCTaGATGCGTGACACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WNGQFGQEAKLDTQRSPRFSNTC*MRDTCC
Trigger: GCAGCAGGTGTCACGCATCAAGCAAGTGTTCGAGAA...CCTTGGACTTCTTTGTGTGTCCAGTTTGGCCTCCTGCCCAAACTGTCCATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGTCAGCACTGCCAAACTaGTTGCGGATGAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGSALPN*LRMRLA
Trigger: TGCCAGCCTCATCCGCAACAAGTTTGGCAGTGCTGA...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAGCTCAGTCAGGTCGTaGAGCTGCTCCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSSVRS*SCSSSR
Trigger: GCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGAATGGTCTTCCTGACTaGGGGCATCCTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGNGLPD*GHPEGQ
Trigger: CTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATT...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS CCA 90 bp CAGAGTGTCTGCTCATTAAGGGCTGAACAACCTGGTTCATTCTGCTaGGCTCCTCCAGCTCTCAATTTCACAAAGCCACGCCACCCTTTT +
Preference number: 5 (lower is better)
Translates to: QSVCSLRAEQPGSFC*APPALNFTKPRHPF
Trigger: AAAAGGGTGGCGTGGCTTTGTGAAATTGAGAGCTGGAGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCAGACACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTCGTGACACCTGCTGCTaGTCCGCGTTGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLRDTCC*SALLAS
Trigger: ACTGGCCAACAACGCGGACAAGCAGCAGGTGTCACG...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp AAAGTTGAGGCAGAGCCCTCTCCTCCTATTCTTAATGGTCTTCCTGACTTGGGGTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KVEAEPSPPILNGLPDLGSFLGK*RQSPLL
Trigger: GAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGA...CCCCAAGTCAGGAAGACCATTAAGAATAGGAGGAGAGGGCTCTGCCTCAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS CCA 90 bp AATAACTGTGAGGCATCAATTTCCAAGGCATCTAAGTTCCTTCCTTaGGCTGACATCTCGCTCAGCTGGACGGTGAGCTGGCTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NNCEASISKASKFLP*ADISLSWTVSWLEK
Trigger: CTTCTCAAGCCAGCTCACCGTCCAGCTGAGCGAGATGTCAGCCCAAGGAAGGAACTTAGATGCCTTGGAAATTGATGCCTCACAGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS CCA 90 bp GTTCCCTTCATCCTTCTGAGCCTCAGCTTGCTCATCTGGACTCCATaGCTGCCAAACCATGATAAGAGCTTCAAGACCAACAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: VPFILLSLSLLIWTP*LPNHDKSFKTNRGE
Trigger: TTCTCCTCTGTTGGTCTTGAAGCTCTTATCATGGTTTGGCAGCCATGGAGTCCAGATGAGCAAGCTGAGGCTCAGAAGGATGAAGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS-3UTR CAA 90 bp CACTATCTCCAGGTAGGGCTGCATTCTAAGCTCCCTTCAGGCCAACAGGGAGAAGATTTCTCCAGCCCTTaGTCTGCGAATAACACTTCA +
Preference number: 5 (lower is better)
Translates to: HYLQVGLHSKLPSGQQGEDFSSP*SANNTS
Trigger: TGAAGTGTTATTCGCAGACAAAGGGCTGGAGAAATC...TTCTCCCTGTTGGCCTGAAGGGAGCTTAGAATGCAGCCCTACCTGGAGATAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTAATGGTCTTCCTGACTaGGGGCATCCTGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLNGLPD*GHPEGQ
Trigger: CTGACCCTCAGGATGCCCCAAGTCAGGAAGACCATT...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS-3UTR CAA 90 bp TTCATCCTCACCATCTCCACCAGAGAAAACCGTAGCTATCTCCGAGGTGGGCTCGAGTCACTAAAACGCTaGCTGAATAATGGGGAACAA +
Preference number: 5 (lower is better)
Translates to: FILTISTRENRSYLRGGLESLKR*LNNGEQ
Trigger: TTGTTCCCCATTATTCAGCAAGCGTTTTAGTGACTC...GAGCCCACCTCGGAGATAGCTACGGTTTTCTCTGGTGGAGATGGTGAGGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS-3UTR CAA 90 bp TTTAGAGGATATTTATTTCTCAGGAAGGTGCACAACAGCTGGCAGGCACTGCTTTCTTTCCTAGGAAAGTaGAGGCAGAGCCCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: FRGYLFLRKVHNSWQALLSFLGK*RQSPLL
Trigger: GAGGAGAGGGCTCTGCCTCAACTTTCCTAGGAAAGA...AAGCAGTGCCTGCCAGCTGTTGTGCACCTTCCTGAGAAATAAATATCCTCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000545499.5
CDS TCA 90 bp CGGTCAGAGAGACATCAGGTCTGTGTTGGTGACTTGTCTCTTGCATaGGTTCATTTAATGACCAGTTTCATGGGAAATCCTCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RSERHQVCVGDLSLA*VHLMTSFMGNPLFS
Trigger: GGAGAAGAGAGGATTTCCCATGAAACTGGTCATTAAATGAACTCATGCAAGAGACAAGTCACCAACACAGACCTGATGTCTCTCTGACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS GCA 72 bp CTGGCGCCCCGCTTGATGGAGGGCCGGGAGCGGATCTaGTGCAGCACGCGGTTGAAGGCGGTGGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: LAPRLMEGRERI*CSTRLKAVGRA
Trigger: CGCCCGGCCCACCGCCTTCAACCGCGTGCTGCAGCAGATCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS TCA 72 bp CGCCCCCACTGCTGCTGTGCAGGCTGGCGCCCCGCTTaGTGGAGGGCCGGGAGCGGATCTGCTGCAGCACGC +
Preference number: 6 (lower is better)
Translates to: RPHCCCAGWRPA*WRAGSGSAAAR
Trigger: GCGTGCTGCAGCAGATCCGCTCCCGGCCCTCCATCAAGCGGGGCGCCAGCCTGCACAGCAGCAGTGGGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS GCA 72 bp GCCCTCCACCACGCCGCCCCCAAAGCCGCTGATGCCTaGGCGCACGTTGGCGCCCACGTCCTTCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: ALHHAAPKAADA*AHVGAHVLQPL
Trigger: CAGGGGCTGAAGGACGTGGGCGCCAACGTGCGCGCAGGCATCAGCGGCTTTGGGGGCGGCGTGGTGGAGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS TCA 72 bp CCCGAAGCCGTGCCGGCGATGAGGTACCCGGGGCTCTaGGGCCCCAGCTGTCTGCGGACTGTGTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PEAVPAMRYPGL*GPSCLRTVSGP
Trigger: GGGGCCTGACACAGTCCGCAGACAGCTGGGGCCTCAGAGCCCCGGGTACCTCATCGCCGGCACGGCTTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS TCA 72 bp GGGACCTGGGTTGGGCGCCGCGGCAGCGCCGGCGTCTaGAGTTGGCCCGCCAGCAGAGTTAGCACCCGTGGT +
Preference number: 6 (lower is better)
Translates to: GTWVGRRGSAGV*SWPASRVSTRG
Trigger: ACCACGGGTGCTAACTCTGCTGGCGGGCCAACTTCAGACGCCGGCGCTGCCGCGGCGCCCAACCCAGGTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS GCA 72 bp GTGGTCAATGGCGGCCTTGGTCCGCTGGGGGTCCGGTaGCCCATCGGGCACGTCCAGGCTGATGGGGCCGTC +
Preference number: 6 (lower is better)
Translates to: VVNGGLGPLGVR*PIGHVQADGAV
Trigger: GACGGCCCCATCAGCCTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp GCGCGCACGTTGGCGCCCACGTCCTTCAGCCCCTGCTaGATGTCCCGCAGCACGTCCTTGGGCTGCCGCGAG +
Preference number: 6 (lower is better)
Translates to: ARTLAPTSFSPC*MSRSTSLGCRE
Trigger: CTCGCGGCAGCCCAAGGACGTGCTGCGGGACATGCAGCAGGGGCTGAAGGACGTGGGCGCCAACGTGCGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp CGCTGCCATACTTGGGGCTGGAGACGAGTGTGGCACTaGCGCTCAGTGCCCGGGCTGCCTCCTCAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: RCHTWGWRRVWH*RSVPGLPPQGA
Trigger: GGCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp GGAGACGAGTGTGGCACTGCCGCTCAGTGCCCGGGCTaGCTCCTCAGGGGGCCCATCTTCCAGGGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: GDECGTAAQCPG*LLRGPIFQGVL
Trigger: AAGGACCCCCTGGAAGATGGGCCCCCTGAGGAGGCAGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CCA 72 bp TTCTGGTGCAGGTGGTCAATGGCGGCCTTGGTCCGCTaGGGGTCCGGTGCCCCATCGGGCACGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: FWCRWSMAALVR*GSGAPSGTSRL
Trigger: CAGCCTGGACGTGCCCGATGGGGCACCGGACCCCCAGCGGACCAAGGCCGCCATTGACCACCTGCACCAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CCA 72 bp GCCCAGCCCCAGAGTTGCTGCCTGCCCCGGCTGAGCTaGCGCTGGCGCTGGAGCACTCATCATCGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: AQPQSCCLPRLS*RWRWSTHHRCH
Trigger: ATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGCCGGGGCAGGCAGCAACTCTGGGGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CCA 72 bp CTGCGGACTGTGTCAGGCCCCCGGGGTCACAGACCCTaGGCAGCACTGGGCTGCGAGCAGGTGTGCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LRTVSGPRGHRP*AALGCEQVCLS
Trigger: ACTCAGGCACACCTGCTCGCAGCCCAGTGCTGCCCAGGGTCTGTGACCCCGGGGGCCTGACACAGTCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS TCA 72 bp CTGTGTGGGCACTGTTTCCCGAAGCCGTGCCGGCGATaGGGTACCCGGGGCTCTGAGGCCCCAGCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: LCGHCFPKPCRR*GTRGSEAPAVC
Trigger: GCAGACAGCTGGGGCCTCAGAGCCCCGGGTACCTCATCGCCGGCACGGCTTCGGGAAACAGTGCCCACACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330675.12
CDS CAA 90 bp GCTGAGCTGGCGCTGGCGCTGGAGCACTCATCATCGCTGCCATACTaGGGGCTGGAGACGAGTGTGGCACTGCCGCTCAGTGCCCGGGCT +
Preference number: 6 (lower is better)
Translates to: AELALALEHSSSLPY*GLETSVALPLSARA
Trigger: AGCCCGGGCACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp AGCCCCTGCTGCATGTCCCGCAGCACGTCCTTGGGCTaGCGCGAGGGCCCGTTCTGCTCAATCTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: SPCCMSRSTSLG*REGPFCSISFR
Trigger: CCTGAAGGAGATTGAGCAGAACGGGCCCTCGCGGCAGCCCAAGGACGTGCTGCGGGACATGCAGCAGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000367159.2
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp TGCCTTCGGCCTCCTCAGCCAGGAGGTACACGTTGCTaGCGTCGGCCAGCAGCAGAGCAGTGTCGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: CLRPPQPGGTRC*RRPAAEQCRWW
Trigger: CCACCACCGACACTGCTCTGCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGGCTGAGGAGGCCGAAGGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS CAA 72 bp CCGATGCCTTCGGCCTCCTCAGCCAGGAGGTACACGTaGCTGCCGTCGGCCAGCAGCAGAGCAGTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: PMPSASSARRYT*LPSASSRAVSV
Trigger: CACCGACACTGCTCTGCTGCTGGCCGACGGCAGCAACGTGTACCTCCTGGCTGAGGAGGCCGAAGGCATCGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS TCA 72 bp CCACCCTTGGCCTGGCCAGGCCAGGCCACACTTGGCTaGGAAGCTCGAGAGGAGGATGCCGGTCAGAGAGAC +
Preference number: 6 (lower is better)
Translates to: PPLAWPGQATLG*EAREEDAGQRD
Trigger: GTCTCTCTGACCGGCATCCTCCTCTCGAGCTTCTCAGCCAAGTGTGGCCTGGCCTGGCCAGGCCAAGGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS CCA 72 bp TCTTTAAATCAGGAGGCTTGCTTCGGGGACCTGGGTTaGGCGCCGCGGCAGCGCCGGCGTCTGAAGTTGGCC +
Preference number: 6 (lower is better)
Translates to: SLNQEACFGDLG*APRQRRRLKLA
Trigger: GGCCAACTTCAGACGCCGGCGCTGCCGCGGCGCCCAACCCAGGTCCCCGAAGCAAGCCTCCTGATTTAAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CAA 90 bp GGGGAGCGAAGACAGGTCACAGTCGAGGCTGGGCAGCAAGAGTCCTaGGGCAGTCATTGCAGGAGGGAGAAGGGAGACAACCCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GERRQVTVEAGQQES*GSHCRREKGDNPRP
Trigger: GGGCCGGGGGTTGTCTCCCTTCTCCCTCCTGCAATGACTGCCCAAGGACTCTTGCTGCCCAGCCTCGACTGTGACCTGTCTTCGCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS TCA 72 bp GGGGGACAGAGGTCCACAGCTGAGGACAATGAGCAGTaGGCAGTGTCACCGGCTGGCCAGCTGAGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: GGQRSTAEDNEQ*AVSPAGQLSPG
Trigger: CCCAGGACTCAGCTGGCCAGCCGGTGACACTGCTCACTGCTCATTGTCCTCAGCTGTGGACCTCTGTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329800.7
ENST00000468846.5
CDS GCA 72 bp CTGAGCTGGCGCTGGCGCTGGAGCACTCATCATCGCTaGCATACTTGGGGCTGGAGACGAGTGTGGCACTGC +
Preference number: 6 (lower is better)
Translates to: LSWRWRWSTHHR*HTWGWRRVWHC
Trigger: GCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGCCAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CAA 72 bp GCGCTGGCGCTGGAGCACTCATCATCGCTGCCATACTaGGGGCTGGAGACGAGTGTGGCACTGCCGCTCAGT +
Preference number: 6 (lower is better)
Translates to: ALALEHSSSLPY*GLETSVALPLS
Trigger: ACTGAGCGGCAGTGCCACACTCGTCTCCAGCCCCAAGTATGGCAGCGATGATGAGTGCTCCAGCGCCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp TCCCTTTCCCGAGACCGACGGCGGCTGTGGAACAGGTaGTTCAGACCGTGGCCAAACATGGAGCCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: SLSRDRRRLWNR*FRPWPNMEPSD
Trigger: GTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS CCA 72 bp GTCTGGTGCTCCCTTTCCCGAGACCGACGGCGGCTGTaGAACAGGTGCTTCAGACCGTGGCCAAACATGGAG +
Preference number: 6 (lower is better)
Translates to: VWCSLSRDRRRL*NRCFRPWPNME
Trigger: CTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTCTCGGGAAAGGGAGCACCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS CCA 72 bp CCTTGGGCTGACATCTCGCTCAGCTGGACGGTGAGCTaGCTTGAGAAGCCTGAGCCTGCAGTCCCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: PWADISLSWTVS*LEKPEPAVPVA
Trigger: TGCCACAGGGACTGCAGGCTCAGGCTTCTCAAGCCAGCTCACCGTCCAGCTGAGCGAGATGTCAGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS GCA 72 bp GCAGTGTCACCGGCTGGCCAGCTGAGTCCTGGGGCCTaGTGGATCTCTCTAATGGCAGCTTCTCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: AVSPAGQLSPGA*WISLMAASHSR
Trigger: TCTGCTGTGAGAAGCTGCCATTAGAGAGATCCAGCAGGCCCCAGGACTCAGCTGGCCAGCCGGTGACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329800.7
ENST00000468846.5
CDS GCA 72 bp CAGCAGAGCATCCAGGTTTCCAGGAGCACCATACAGTaGATTGGACTTAGGGCTCCCCAGCGCCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: QQSIQVSRSTIQ*IGLRAPQRPTR
Trigger: CCTGGTGGGGCGCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCTGGAAACCTGGATGCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS GCA 72 bp CCTCCTCGCCCTGTTGTTGCTGCAGCTCGTCCGATCTaGACCTCTTCATGGTGTATGTGGGTCGGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: PPRPVVAAARPI*TSSWCMWVGKG
Trigger: CCCCTTGCCGACCCACATACACCATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAACAGGGCGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 72 bp TCGACCTGGGGAGCGAAGACAGGTCACAGTCGAGGCTaGGCAGCAAGAGTCCTTGGGCAGTCATTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: STWGAKTGHSRG*AARVLGQSLQE
Trigger: CTCCTGCAATGACTGCCCAAGGACTCTTGCTGCCCAGCCTCGACTGTGACCTGTCTTCGCTCCCCAGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 72 bp GCAGCTCGTCCGATCTGCACCTCTTCATGGTGTATGTaGGTCGGCAAGGGGAATCTGTCCTTCCAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: AARPICTSSWCM*VGKGNLSFQRA
Trigger: GGCGCGCTGGAAGGACAGATTCCCCTTGCCGACCCACATACACCATGAAGAGGTGCAGATCGGACGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 72 bp GACCGACGGCGGCTGTGGAACAGGTGCTTCAGACCGTaGCCAAACATGGAGCCCTCTGACAGCTGCTGGATT +
Preference number: 6 (lower is better)
Translates to: DRRRLWNRCFRP*PNMEPSDSCWI
Trigger: AATCCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTGTTCCACAGCCGCCGTCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS CCA 72 bp GACGCGATGCATCTCCGGAGAGCGCTCCTTCTCATCTaGGGAGTCATGGTCGGACATACCCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DAMHLRRALLLI*GVMVGHTLLLL
Trigger: CAGCAGCAGCAGGGTATGTCCGACCATGACTCCCCAGATGAGAAGGAGCGCTCTCCGGAGATGCATCGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358024.8
ENST00000495538.5
ENST00000545499.5
CDS CAA 72 bp AGAGCATCCAGGTTTCCAGGAGCACCATACAGTGCATaGGACTTAGGGCTCCCCAGCGCCCCACCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RASRFPGAPYSA*DLGLPSAPPGP
Trigger: TGGGCCTGGTGGGGCGCTGGGGAGCCCTAAGTCCAATGCACTGTATGGTGCTCCTGGAAACCTGGATGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS CCA 72 bp GTGTCACCGGCTGGCCAGCTGAGTCCTGGGGCCTGCTaGATCTCTCTAATGGCAGCTTCTCACAGCAGAACT +
Preference number: 6 (lower is better)
Translates to: VSPAGQLSPGAC*ISLMAASHSRT
Trigger: AGTTCTGCTGTGAGAAGCTGCCATTAGAGAGATCCAGCAGGCCCCAGGACTCAGCTGGCCAGCCGGTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329800.7
ENST00000468846.5
CDS CCA 72 bp GACAGGTCACAGTCGAGGCTGGGCAGCAAGAGTCCTTaGGCAGTCATTGCAGGAGGGAGAAGGGAGACAACC +
Preference number: 6 (lower is better)
Translates to: DRSQSRLGSKSP*AVIAGGRRETT
Trigger: GGTTGTCTCCCTTCTCCCTCCTGCAATGACTGCCCAAGGACTCTTGCTGCCCAGCCTCGACTGTGACCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CAA 90 bp CCTCCAGCCGCTCGTACAGCAGTCTCTTCCTCCTTGGACTTCATCTaGACAGTGCCAGCAGGAAATTCTGTGAGTGGCCAGCAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PPAARTAVSSSLDFI*TVPAGNSVSGQQRG
Trigger: CCCCCTCTGCTGGCCACTCACAGAATTTCCTGCTGGCACTGTCAAGATGAAGTCCAAGGAGGAAGAGACTGCTGTACGAGCGGCTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468846.5
CDS CCA 72 bp AGGGGGACAGAGGTCCACAGCCATGAGAGGTGGGCCTaGCTGCCTCTACATGCAGAGTGTCTGCTCATTAAG +
Preference number: 6 (lower is better)
Translates to: RGTEVHSHERWA*LPLHAECLLIK
Trigger: CTTAATGAGCAGACACTCTGCATGTAGAGGCAGCCAGGCCCACCTCTCATGGCTGTGGACCTCTGTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS TCA 72 bp CTTCCATGGAGTCCTCCAGGTGAGACTGTCCCTCCTTaGTCTCCCGTAGCTCTTCCAGCAGAGCATCCAGGT +
Preference number: 6 (lower is better)
Translates to: LPWSPPGETVPP*SPVALPAEHPG
Trigger: ACCTGGATGCTCTGCTGGAAGAGCTACGGGAGATCAAGGAGGGACAGTCTCACCTGGAGGACTCCATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS TCA 72 bp TCGTCATCTCGTTCTGATGAAGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCTCGTACCTGTAGCGCT +
Preference number: 6 (lower is better)
Translates to: SSSRSDEAQSGR*AAPPAARTCSA
Trigger: AGCGCTACAGGTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000329800.7
ENST00000330675.12
ENST00000358024.8
ENST00000481950.2
ENST00000495538.5
ENST00000545499.5
ENST00000637895.1
CDS TCA 72 bp CAGGTGCTTCAGACCGTGGCCAAACATGGAGCCCTCTaGCAGCTGCTGGATTTTCTGCGCTCTGACTTCCTG +
Preference number: 6 (lower is better)
Translates to: QVLQTVAKHGAL*QLLDFLRSDFL
Trigger: CAGGAAGTCAGAGCGCAGAAAATCCAGCAGCTGTCAGAGGGCTCCATGTTTGGCCACGGTCTGAAGCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS CCA 72 bp TCGGCAAGGGGAATCTGTCCTTCCAGCGCGCCGTCTTaGGGAAGACCGCACCCCCTCTTATATTCATATGAG +
Preference number: 6 (lower is better)
Translates to: SARGICPSSAPS*GRPHPLLYSYE
Trigger: CTCATATGAATATAAGAGGGGGTGCGGTCTTCCCCAAGACGGCGCGCTGGAAGGACAGATTCCCCTTGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 72 bp TCTAAGTTCCTTCCTTGGGCTGACATCTCGCTCAGCTaGACGGTGAGCTGGCTTGAGAAGCCTGAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SKFLPWADISLS*TVSWLEKPEPA
Trigger: TGCAGGCTCAGGCTTCTCAAGCCAGCTCACCGTCCAGCTGAGCGAGATGTCAGCCCAAGGAAGGAACTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS TCA 72 bp TCGTCATCTCGTTCTGATGAAGCTCAGTCAGGTCGTTaGGCTGCTCCTCCAGCCGCTCGTACAGCAGTCTCT +
Preference number: 6 (lower is better)
Translates to: SSSRSDEAQSGR*AAPPAARTAVS
Trigger: AGAGACTGCTGTACGAGCGGCTGGAGGAGCAGCTCAACGACCTGACTGAGCTTCATCAGAACGAGATGACGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468846.5
CDS CCA 72 bp GTTGTTGCTGCAGCTCGTCCGATCTGCACCTCTTCATaGTGTATGTGGGTCGGCAAGGGGAATCTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: VVAAARPICTSS*CMWVGKGNLSF
Trigger: GAAGGACAGATTCCCCTTGCCGACCCACATACACCATGAAGAGGTGCAGATCGGACGAGCTGCAGCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358024.8
CDS CCA 72 bp ACCAGGTCTCCCTTATCGACCCATGAGAGGTGGGCCTaGCTGCCTCTACATGCAGAGTGTCTGCTCATTAAG +
Preference number: 6 (lower is better)
Translates to: TRSPLSTHERWA*LPLHAECLLIK
Trigger: CTTAATGAGCAGACACTCTGCATGTAGAGGCAGCCAGGCCCACCTCTCATGGGTCGATAAGGGAGACCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481950.2
ENST00000637895.1
CDS CAA 90 bp AGGTCTCCCTTATCGACAGCAGTCTCTTCCTCCTTGGACTTCATCTaGACAGTGCCAGCAGGAAATTCTGTGAGTGGCCAGCAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: RSPLSTAVSSSLDFI*TVPAGNSVSGQQRG
Trigger: CCCCCTCTGCTGGCCACTCACAGAATTTCCTGCTGGCACTGTCAAGATGAAGTCCAAGGAGGAAGAGACTGCTGTCGATAAGGGAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329800.7
ENST00000367159.2
CDS TCA 72 bp CTGCCTCTACATGCAGAGTGTCTGCTCATTAAGGGCTaGACAACCTGGTTCATTCTGCTGGGCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LPLHAECLLIKG*TTWFILLGSSS
Trigger: GCTGGAGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCAGACACTCTGCATGTAGAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS GCA 72 bp ATTTCACAAAGCCACGCCACCCTTTTAGCCAACGCGTaGAGAGCTCCTCACTCTGAGAACAGACTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: ISQSHATLLANA*RAPHSENRLLP
Trigger: GGGGAGAAGTCTGTTCTCAGAGTGAGGAGCTCTGCACGCGTTGGCTAAAAGGGTGGCGTGGCTTTGTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS CCA 72 bp GAGGCATCAATTTCCAAGGCATCTAAGTTCCTTCCTTaGGCTGACATCTCGCTCAGCTGGACGGTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: EASISKASKFLP*ADISLSWTVSW
Trigger: CCAGCTCACCGTCCAGCTGAGCGAGATGTCAGCCCAAGGAAGGAACTTAGATGCCTTGGAAATTGATGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS CAA 72 bp TGGCTTGTCACGCTTCAGTTACAGGCAGGAGCATTGTaGTCCAACCTGGGTTCATCCTGGGTGTGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: WLVTLQLQAGAL*SNLGSSWVCCP
Trigger: TGGACAGCACACCCAGGATGAACCCAGGTTGGACAACAATGCTCCTGCCTGTAACTGAAGCGTGACAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS TCA 72 bp AAATCCTCTCTTCTCCATCTCCACGCTCAGTATGGGTaGCTGGGGCTGACCCCAACATCTCCACCAGAGAAA +
Preference number: 6 (lower is better)
Translates to: KSSLLHLHAQYG*LGLTPTSPPEK
Trigger: TTTCTCTGGTGGAGATGTTGGGGTCAGCCCCAGTCACCCATACTGAGCGTGGAGATGGAGAAGAGAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS TCA 72 bp TCGGCAACCTCAGGCCGGAAAATAAACAGCTCCATGTaGACAGTTCTTTCGGCTTCTGGTTCTAGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SATSGRKINSSM*TVLSASGSSCW
Trigger: CCAGCAGCTAGAACCAGAAGCCGAAAGAACTGTTCACATGGAGCTGTTTATTTTCCGGCCTGAGGTTGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS TCA 72 bp GAGCCCGCATTCCTCAACCTTCTGGTGGCTGGACCCTaGGAGTTGCCTAGATCTCATTTCCCATCTGAATAT +
Preference number: 6 (lower is better)
Translates to: EPAFLNLLVAGP*ELPRSHFPSEY
Trigger: ATATTCAGATGGGAAATGAGATCTAGGCAACTCTCAGGGTCCAGCCACCAGAAGGTTGAGGAATGCGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS CCA 72 bp TGCTCATTAAGGGCTGAACAACCTGGTTCATTCTGCTaGGCTCCTCCAGCTCTCAATTTCACAAAGCCACGC +
Preference number: 6 (lower is better)
Translates to: CSLRAEQPGSFC*APPALNFTKPR
Trigger: GCGTGGCTTTGTGAAATTGAGAGCTGGAGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS CCA 72 bp CTTCCTGACTCTGAGCTGCTCAGGCCAAATGAGGAATaGCATTGGCTTATTCTGGTGAGCTCCTTAGTGGCT +
Preference number: 6 (lower is better)
Translates to: LPDSELLRPNEE*HWLILVSSLVA
Trigger: AGCCACTAAGGAGCTCACCAGAATAAGCCAATGCCATTCCTCATTTGGCCTGAGCAGCTCAGAGTCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495538.5
CDS CCA 72 bp GTTCCCTTCATCCTTCTGAGCCTCAGCTTGCTCATCTaGACTCCATGGCTGCCAAACCATGATAAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: VPFILLSLSLLI*TPWLPNHDKSF
Trigger: GAAGCTCTTATCATGGTTTGGCAGCCATGGAGTCCAGATGAGCAAGCTGAGGCTCAGAAGGATGAAGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS GCA 72 bp GTCTGCTCATTAAGGGCTGAACAACCTGGTTCATTCTaGTGGGCTCCTCCAGCTCTCAATTTCACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: VCSLRAEQPGSF*WAPPALNFTKP
Trigger: TGGCTTTGTGAAATTGAGAGCTGGAGGAGCCCAGCAGAATGAACCAGGTTGTTCAGCCCTTAATGAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367159.2
CDS GCA 72 bp CATTCCTCAACCTTCTGGTGGCTGGACCCTGAGAGTTaGCTAGATCTCATTTCCCATCTGAATATGGCTTGT +
Preference number: 6 (lower is better)
Translates to: HSSTFWWLDPES*LDLISHLNMAC
Trigger: ACAAGCCATATTCAGATGGGAAATGAGATCTAGGCAACTCTCAGGGTCCAGCCACCAGAAGGTTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS CAA 90 bp CACACATTATTCAAACAATCTCGGATGGGTGAGTCACTAAAACGCTaGCTGAATAATGGGGAACAAACACAGAGACCTGACACGGAGCTG +
Preference number: 6 (lower is better)
Translates to: HTLFKQSRMGESLKR*LNNGEQTQRPDTEL
Trigger: CAGCTCCGTGTCAGGTCTCTGTGTTTGTTCCCCATTATTCAGCAAGCGTTTTAGTGACTCACCCATCCGAGATTGTTTGAATAATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS CAA 72 bp GAGTTGCCTAGATCTCATTTCCCATCTGAATATGGCTaGTCACGCTTCAGTTACAGGCAGGAGCATTGTTGT +
Preference number: 6 (lower is better)
Translates to: ELPRSHFPSEYG*SRFSYRQEHCC
Trigger: ACAACAATGCTCCTGCCTGTAACTGAAGCGTGACAAGCCATATTCAGATGGGAAATGAGATCTAGGCAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648708.1
CDS CAA 72 bp TTCAAACAATCTCGGATGGGTGAGTCACTAAAACGCTaGCTGAATAATGGGGAACAAACACAGAGACCTGAC +
Preference number: 6 (lower is better)
Translates to: FKQSRMGESLKR*LNNGEQTQRPD
Trigger: GTCAGGTCTCTGTGTTTGTTCCCCATTATTCAGCAAGCGTTTTAGTGACTCACCCATCCGAGATTGTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS CAA 90 bp CCTGCTGTCCACTTTTTGGTTAGCATCTTGGATTTCTCCAGCCCTTaGTCTGCGAATAACACTTCACACATTATTCAAACAATCTCGGAT +
Preference number: 6 (lower is better)
Translates to: PAVHFLVSILDFSSP*SANNTSHIIQTISD
Trigger: ATCCGAGATTGTTTGAATAATGTGTGAAGTGTTATTCGCAGACAAAGGGCTGGAGAAATCCAAGATGCTAACCAAAAAGTGGACAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545499.5
CDS CAA 72 bp CACTTTTTGGTTAGCATCTTGGATTTCTCCAGCCCTTaGTCTGCGAATAACACTTCACACATTATTCAAACA +
Preference number: 6 (lower is better)
Translates to: HFLVSILDFSSP*SANNTSHIIQT
Trigger: TGTTTGAATAATGTGTGAAGTGTTATTCGCAGACAAAGGGCTGGAGAAATCCAAGATGCTAACCAAAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545499.5