RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172765

Ensembl transcript IDs: ENST00000393238.7, ENST00000393238.8, ENST00000426664.6, ENST00000432054.6, ENST00000503256.5, ENST00000508869.5, ENST00000509440.5, ENST00000512902.5, ENST00000513411.5, ENST00000648771.1

Found 584 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAACTTAAGTCTTCAGGCAGTTTGGGG +
Preference number: 1 (lower is better)
Translates to: TVPGQIGTVSIHLSK*LPVPTKLKSSGSLG
Trigger: CCCCAAACTGCCTGAAGACTTAAGTTTTGTGGGCACTGGAAGTCACTTTGATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CCA 90 bp ATTTGGACATGGCTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTaGCATCAGACTTTTACTCCATTCAGAACAGGGGAGAGAGAAGAC +
Preference number: 1 (lower is better)
Translates to: IWTWLVRKARSQYLS*HQTFTPFRTGERED
Trigger: GTCTTCTCTCTCCCCTGTTCTGAATGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAGCCATGTCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR TCA 90 bp GGAAGCTGGCAACATTTCACACCCAAAACTTGGGTCCTGCTAACCTaGCATTTCCTTCACTGCTCTTTAGGAGAATCACCTTTGGTTGAT +
Preference number: 1 (lower is better)
Translates to: GSWQHFTPKTWVLLT*HFLHCSLGESPLVD
Trigger: ATCAACCAAAGGTGATTCTCCTAAAGAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAATGTTGCCAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR GCA 90 bp CAAAGTAGTTATGGAAACAACATGCTGGCTCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTGGCACCATTAGGTAAACTGTCCTTT +
Preference number: 1 (lower is better)
Translates to: QSSYGNNMLALRNPA*QSKRRLAPLGKLSF
Trigger: AAAGGACAGTTTACCTAATGGTGCCAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGTTTCCATAACTACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CCA 90 bp GCAAAGCATACTTTGTTACTCTTTTCAGGGCATCTTATATGCACTTaGTTGCACAGAATGAGGCTAAGAGGGAACAGCATTTGTGACCAA +
Preference number: 1 (lower is better)
Translates to: AKHTLLLFSGHLICT*LHRMRLRGNSICDQ
Trigger: TTGGTCACAAATGCTGTTCCCTCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAGATGCCCTGAAAAGAGTAACAAAGTATGCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CCA 90 bp AGTGGAAAGCCTTCCTTACTAGGACATACTGAGTATACCAAGGAATaGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAA +
Preference number: 1 (lower is better)
Translates to: SGKPSLLGHTEYTKE*KLEQTEVPFNYHKQ
Trigger: TTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTCAGTATGTCCTAGTAAGGAAGGCTTTCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTGGCCCTGCTCTGGGTaGAGTTTTGAGGGGGCAACA +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSWPCSG*SFEGAT
Trigger: TGTTGCCCCCTCAAAACTGCACCCAGAGCAGGGCCA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTCCAGCCCAAGATCACTaGGTGAACGTTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAPAQDH*VNVFLG
Trigger: CCCCAAGAAAACGTTCACCCAGTGATCTTGGGCTGG...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTCCCAAGATCACTGGGTaGACGTTTTCTTGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAPKITG*TFSWGK
Trigger: TTTGCCCCAAGAAAACGTTCACCCAGTGATCTTGGG...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCCCAAGATCACTGGGTaGACGTTTTCTTGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSPKITG*TFSWGK
Trigger: TTTGCCCCAAGAAAACGTTCACCCAGTGATCTTGGG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKCLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCGTAAGTGGCCAACTTaGGTGAGAAAGCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSRKWPT*VRKPER
Trigger: TCTCTCTGGCTTTCTCACCCAAGTTGGCCACTTACG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTGTGCAGTGATCCTTTaGGGGATGATGCTTTCACTT +
Preference number: 2 (lower is better)
Translates to: CSSSTRMMELVMRRGKAACAVIL*GMMLSL
Trigger: AAGTGAAAGCATCATCCCCCAAAGGATCACTGCACA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPCLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAGCCACAATTTAGATTaGCCTTCGGTGTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSSHNLD*PSVCSR
Trigger: TCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLRNPA*QSKRRL
Trigger: CAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGGTGTTAGGTTTAACTaGTTTGCCCTCATCAGGTTT +
Preference number: 2 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAGVRFN*FALIRF
Trigger: AAACCTGATGAGGGCAAACCAGTTAAACCTAACACC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCGTAAGTGGCCAACTTaGGTGAGAAAGCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKRKWPT*VRKPER
Trigger: TCTCTCTGGCTTTCTCACCCAAGTTGGCCACTTACG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACCAGCCCAAGATCACTaGGTGAACGTTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPPAQDH*VNVFLG
Trigger: CCCCAAGAAAACGTTCACCCAGTGATCTTGGGCTGG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAATGGGACTATTTGGCTaGAGGCAGGGGGCTTTCTAC +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPMGLFG*RQGAFY
Trigger: GTAGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCAT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGATGCTGGGGCCAAAATaGAGACAGAAGACTCCACAT +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKMLGPK*RQKTPH
Trigger: ATGTGGAGTCTTCTGTCTTCATTTTGGCCCCAGCAT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATGGGTCCTGCTAACCTaGCATTTCCTTCACTGCTCT +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPWVLLT*HFLHCS
Trigger: AGAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGCACCCTTGTGGCCCTaGTCTGGGTGCAGTTTTGAG +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNAPLWP*SGCSFE
Trigger: CTCAAAACTGCACCCAGAGCAGGGCCACAAGGGTGC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGTCCTTTGGCACTCCTaGCTAAAAAGTCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSVLWHS*LKSHCN
Trigger: ATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGAC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCCTATCCTACTACACTaGTTTTTGGAAACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSPILLH*FLETAS
Trigger: GGAGGCTGTTTCCAAAAACCAGTGTAGTAGGATAGG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAATGCTGGGGCCAAAATaGAGACAGAAGACTCCACAT +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPMLGPK*RQKTPH
Trigger: ATGTGGAGTCTTCTGTCTTCATTTTGGCCCCAGCAT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAACAACATGCTGGCTCTaGGAAATCCAGCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPTTCWL*EIQLAK
Trigger: TTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAGCCACAATTTAGATTaGCCTTCGGTGTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPSHNLD*PSVCSR
Trigger: TCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGCACCCTTGTGGCCCTaGTCTGGGTGCAGTTTTGAG +
Preference number: 2 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIAPLWP*SGCSFE
Trigger: CTCAAAACTGCACCCAGAGCAGGGCCACAAGGGTGC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCGTAAGTGGCCAACTTaGGTGAGAAAGCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNRKWPT*VRKPER
Trigger: TCTCTCTGGCTTTCTCACCCAAGTTGGCCACTTACG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTACTACACTGGTTTTTaGAAACAGCCTCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKYYTGF*KQPPAL
Trigger: GAGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGATAGAAAGTCAGCATaGGACTATTTGGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPDRKSA*DYLAGG
Trigger: GCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 90 bp TATTTGGACATGGCTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTaGGCATCAGACTTTTACTCCATTCAGAACAGGGGAGAGAGAAGA +
Preference number: 2 (lower is better)
Translates to: YLDMASEEGSLPIFV*ASDFYSIQNRGERR
Trigger: TCTTCTCTCTCCCCTGTTCTGAATGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAGCCATGTCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 90 bp CTCATTATTTGGACATGGCTAGTGAGGAAGGCTCGCTCCCAATATTaGTCTTGGCATCAGACTTTTACTCCATTCAGAACAGGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: LIIWTWLVRKARSQY*SWHQTFTPFRTGER
Trigger: TCTCTCCCCTGTTCTGAATGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAGCCATGTCCAAATAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAGTGGCCAACTTGGGTaGGAAAGCCAGAGAGATCCA +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSISGQLG*ESQRDP
Trigger: TGGATCTCTCTGGCTTTCTCACCCAAGTTGGCCACT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGGGGGCTCTCTACTCTaGGCAATTACGCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNGGSLL*AITLKQ
Trigger: CTGCTTTAGCGTAATTGCTCAGAGTAGAGAGCCCCC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGGGGGCTCTCTACTCTaGGCAATTACGCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIGGSLL*AITLKQ
Trigger: CTGCTTTAGCGTAATTGCTCAGAGTAGAGAGCCCCC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACAGCCACAATTTAGATTaGCCTTCGGTGTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSHNLD*PSVCSR
Trigger: TCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACACTGTAGTAGGACTGTaGAGTGATCCTTTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNTVVGL*SDPLGD
Trigger: ATCCCCCAAAGGATCACTGCACAGTCCTACTACAGT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGAGAGGGAGTTTAAACTaGATCTCAAAACAAAGGCGG +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKRGSLN*ISKQRR
Trigger: CCGCCTTTGTTTTGAGATGCAGTTTAAACTCCCTCT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTGGCCCTGCTCTGGGTaGAGTTTTGAGGGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHWPCSG*SFEGAT
Trigger: TGTTGCCCCCTCAAAACTGCACCCAGAGCAGGGCCA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGTCCTTTGGCACTCCTaGCTAAAAAGTCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPVLWHS*LKSHCN
Trigger: ATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGAC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATGTGCAGTGATCCTTTaGGGGATGATGCTTTCACTT +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPCAVIL*GMMLSL
Trigger: AAGTGAAAGCATCATCCCCCAAAGGATCACTGCACA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACCTATCCTACTACACTaGTTTTTGGAAACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPPILLH*FLETAS
Trigger: GGAGGCTGTTTCCAAAAACCAGTGTAGTAGGATAGG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGAATTTCCTGGTAAGTaGAAACAGGCAAAGCATACT +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSEFPGK*KQAKHT
Trigger: AGTATGCTTTGCCTGTTTCCACTTACCAGGAAATTC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGAAGCACTGAGAGTTTaGGTATTACATTCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSEALRV*VLHSSS
Trigger: ACTTGAAGAATGTAATACTCAAACTCTCAGTGCTTC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTGGGTCCTGCTAACCTaGCATTTCCTTCACTGCTCT +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIWVLLT*HFLHCS
Trigger: AGAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCAGCTGAGGTTGGGGTaGAGACTGGAGTACCTGAGT +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHQLRLG*RLEYLS
Trigger: ACTCAGGTACTCCAGTCTTCACCCCAACCTCAGCTG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGGGGGCTCTCTACTCTaGGCAATTACGCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAGGSLL*AITLKQ
Trigger: CTGCTTTAGCGTAATTGCTCAGAGTAGAGAGCCCCC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAGAGGAGCATTCAAATaGGGGGACGTTTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRARGAFK*GDVSTQ
Trigger: CTGGGTGGAAACGTCCCCTCATTTGAATGCTCCTCT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGCGCATTCTACAACCTaGACAATCACCCAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAAHSTT*TITQAN
Trigger: GTTGGCCTGGGTGATTGTTCAGGTTGTAGAATGCGC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRACLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATGGCCCTGCTCTGGGTaGAGTTTTGAGGGGGCAACA +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVWPCSG*SFEGAT
Trigger: TGTTGCCCCCTCAAAACTGCACCCAGAGCAGGGCCA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTGGCCCTGCTCTGGGTaGAGTTTTGAGGGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYWPCSG*SFEGAT
Trigger: TGTTGCCCCCTCAAAACTGCACCCAGAGCAGGGCCA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCCAAAAATTCAGACATaGAATGTGGTAGGATTTCAC +
Preference number: 2 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSPKIQT*NVVGFH
Trigger: GTGAAATCCTACCACATTCCATGTCTGAATTTTTGG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACAGTGGCCAACTTGGGTaGGAAAGCCAGAGAGATCCA +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSGQLG*ESQRDP
Trigger: TGGATCTCTCTGGCTTTCTCACCCAAGTTGGCCACT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATATGCTGGGGCCAAAATaGAGACAGAAGACTCCACAT +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNMLGPK*RQKTPH
Trigger: ATGTGGAGTCTTCTGTCTTCATTTTGGCCCCAGCAT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTGGGTCCTGCTAACCTaGCATTTCCTTCACTGCTCT +
Preference number: 2 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIWVLLT*HFLHCS
Trigger: AGAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCACAACATGCTGGCTCTaGGAAATCCAGCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSITTCWL*EIQLAK
Trigger: TTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACAGCTGAGGTTGGGGTaGAGACTGGAGTACCTGAGT +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVQLRLG*RLEYLS
Trigger: ACTCAGGTACTCCAGTCTTCACCCCAACCTCAGCTG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGGGGCTCTCTACTCTaGGCAATTACGCTAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGGSLL*AITLKQ
Trigger: CTGCTTTAGCGTAATTGCTCAGAGTAGAGAGCCCCC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAACTTCTGGGTCTGGTaGATAATTAAGGGACAAGAA +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPNFWVW*IIKGQE
Trigger: TTCTTGTCCCTTAATTATTCACCAGACCCAGAAGTT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAGGTACAGCAAAGAATaGAAACAGATGCATGGTTAC +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPRYSKE*KQMHGY
Trigger: GTAACCATGCATCTGTTTTCATTCTTTGCTGTACCT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCGCATTCTACAACCTaGACAATCACCCAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHAHSTT*TITQAN
Trigger: GTTGGCCTGGGTGATTGTTCAGGTTGTAGAATGCGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACTTACTAGGACATACTaGGTATACCAAGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLTRTY*VYQGME
Trigger: TTCCATTCCTTGGTATACTCAGTATGTCCTAGTAAG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHCLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGATTGCCCTTCGGTGTaGTCCAGATTGTTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIDCPSV*SRLLVH
Trigger: ATGAACCAACAATCTGGAGCACACCGAAGGGCAATC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCACTGTAGTAGGACTGTaGAGTGATCCTTTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSITVVGL*SDPLGD
Trigger: ATCCCCCAAAGGATCACTGCACAGTCCTACTACAGT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLRNPA*QSKRRL
Trigger: CAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTGTGCTCCAGATTGTTaGTTCATATTAAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKCAPDC*FILKDC
Trigger: ACAGTCCTTTAATATGAACCAACAATCTGGAGCACA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCCAGCCCAAGATCACTaGGTGAACGTTTTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHPAQDH*VNVFLG
Trigger: CCCCAAGAAAACGTTCACCCAGTGATCTTGGGCTGG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTACATTATAGGAAGCTaGCAACATTTCACACCCAAA +
Preference number: 2 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKYIIGS*QHFTPK
Trigger: TTTGGGTGTGAAATGTTGCCAGCTTCCTATAATGTA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACATGGGACTATTTGGCTaGAGGCAGGGGGCTTTCTAC +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHMGLFG*RQGAFY
Trigger: GTAGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCAT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGAGTATACCAAGGAATaGAAATTGGAGCAGACAGAA +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPEYTKE*KLEQTE
Trigger: TTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAACAACATGCTGGCTCTaGGAAATCCAGCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRATTCWL*EIQLAK
Trigger: TTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGCACCTGATCTGCACTaGAGGTCCTTCCTAAGACAG +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYAPDLH*RSFLRQ
Trigger: CTGTCTTAGGAAGGACCTTCAGTGCAGATCAGGTGC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACAGCCATTACTGCACCTaGTCTGCACTGAAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSHYCT*SALKVL
Trigger: AAGGACCTTCAGTGCAGATCAGGTGCAGTAATGGCT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAGAGGAGCATTCAAATaGGGGGACGTTTCCACCCAG +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVRGAFK*GDVSTQ
Trigger: CTGGGTGGAAACGTCCCCTCATTTGAATGCTCCTCT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGCGCATTCTACAACCTaGACAATCACCCAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVAHSTT*TITQAN
Trigger: GTTGGCCTGGGTGATTGTTCAGGTTGTAGAATGCGC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATGTGCTCCAGATTGTTaGTTCATATTAAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPCAPDC*FILKDC
Trigger: ACAGTCCTTTAATATGAACCAACAATCTGGAGCACA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTGTGCAGTGATCCTTTaGGGGATGATGCTTTCACTT +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNCAVIL*GMMLSL
Trigger: AAGTGAAAGCATCATCCCCCAAAGGATCACTGCACA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGATAGAAAGTCAGCATaGGACTATTTGGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRADRKSA*DYLAGG
Trigger: GCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACCCAGGCTAGAGGCATaGACAAATAAACCAGGAATG +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAPRLEA*TNKPGM
Trigger: CATTCCTGGTTTATTTGTCCATGCCTCTAGCCTGGG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAAGGAGCCAGTAGAGTaGAAAGCCTTCCTTACTAGG +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAKEPVE*KAFLTR
Trigger: CCTAGTAAGGAAGGCTTTCCACTCTACTGGCTCCTT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 90 bp AAGCATACTTTGTTACTCTTTTCAGGGCATCTTATATGCACTTGGTaGCACAGAATGAGGCTAAGAGGGAACAGCATTTGTGACCAATAC +
Preference number: 2 (lower is better)
Translates to: KHTLLLFSGHLICTW*HRMRLRGNSICDQY
Trigger: GTATTGGTCACAAATGCTGTTCCCTCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAGATGCCCTGAAAAGAGTAACAAAGTATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGAAGCACTGAGAGTTTaGGTATTACATTCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNEALRV*VLHSSS
Trigger: ACTTGAAGAATGTAATACTCAAACTCTCAGTGCTTC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACCCAAGATCACTGGGTaGACGTTTTCTTGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVPKITG*TFSWGK
Trigger: TTTGCCCCAAGAAAACGTTCACCCAGTGATCTTGGG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCCCAAGATCACTGGGTaGACGTTTTCTTGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYPKITG*TFSWGK
Trigger: TTTGCCCCAAGAAAACGTTCACCCAGTGATCTTGGG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACAGCCATTACTGCACCTaGTCTGCACTGAAGGTCCTT +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSHYCT*SALKVL
Trigger: AAGGACCTTCAGTGCAGATCAGGTGCAGTAATGGCT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGAGGGAGTTTAAACTaGATCTCAAAACAAAGGCGG +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNRGSLN*ISKQRR
Trigger: CCGCCTTTGTTTTGAGATGCAGTTTAAACTCCCTCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYLETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLRNPA*QSKRRL
Trigger: CAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTCCTTTGGCACTCCTaGCTAAAAAGTCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVLWHS*LKSHCN
Trigger: ATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACGTAAGTGGCCAACTTaGGTGAGAAAGCCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVRKWPT*VRKPER
Trigger: TCTCTCTGGCTTTCTCACCCAAGTTGGCCACTTACG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGATAGAAAGTCAGCATaGGACTATTTGGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHDRKSA*DYLAGG
Trigger: GCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACAAGGCAGCTCCTCATTaGAACTCTCTCAGAACTCAG +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHKAAPH*NSLRTQ
Trigger: CTGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAATGCTGGGGCCAAAATaGAGACAGAAGACTCCACAT +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVMLGPK*RQKTPH
Trigger: ATGTGGAGTCTTCTGTCTTCATTTTGGCCCCAGCAT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACACAACATGCTGGCTCTaGGAAATCCAGCTTGCCAAA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYTTCWL*EIQLAK
Trigger: TTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAIHLSK*LPVPTK
Trigger: TTTTGTGGGCACTGGAAGTCACTTTGATAGATGGAT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTCAGCATTTTCATCTaGCTGTACCTCAAAGGAACA +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALSIFI*LYLKGT
Trigger: TGTTCCTTTGAGGTACAGTCAGATGAAAATGCTGAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGTAGTCAATCCCTACTaGGGATATCACCTAGCATAC +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHVVNPY*GYHLAY
Trigger: GTATGCTAGGTGATATCCTCAGTAGGGATTGACTAC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAACTGTAGTAGGACTGTaGAGTGATCCTTTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVTVVGL*SDPLGD
Trigger: ATCCCCCAAAGGATCACTGCACAGTCCTACTACAGT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACACTGTAGTAGGACTGTaGAGTGATCCTTTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYTVVGL*SDPLGD
Trigger: ATCCCCCAAAGGATCACTGCACAGTCCTACTACAGT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTTCATAGTGTCCTTTaGCACTCCTGCCTAAAAAGT +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVHSVL*HSCLKS
Trigger: ACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGATAGAAAGTCAGCATaGGACTATTTGGCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVDRKSA*DYLAGG
Trigger: GCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHIHLSK*LPVPTK
Trigger: TTTTGTGGGCACTGGAAGTCACTTTGATAGATGGAT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGGGGCTTTCTACAGGTaGAAACCTTCCTTTGATAGA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYGAFYR*KPSFDR
Trigger: TCTATCAAAGGAAGGTTTTCACCTGTAGAAAGCCCC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAGGTACAGCAAAGAATaGAAACAGATGCATGGTTAC +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRARYSKE*KQMHGY
Trigger: GTAACCATGCATCTGTTTTCATTCTTTGCTGTACCT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTTATAGAAGAGCTCTaGCAAGACAAAAGAACCCAA +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVIEEL*QDKRTQ
Trigger: TTGGGTTCTTTTGTCTTGTCAGAGCTCTTCTATAAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCAGGGCATCTTATATaGACTTGGTTGCACAGAATG +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSGHLI*TWLHRM
Trigger: CATTCTGTGCAACCAAGTGCATATAAGATGCCCTGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTGTGCTCCAGATTGTTaGTTCATATTAAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: LIDRNRPRANRNSFNPSICAPDC*FILKDC
Trigger: ACAGTCCTTTAATATGAACCAACAATCTGGAGCACA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCCAAAAATTCAGACATaGAATGTGGTAGGATTTCAC +
Preference number: 2 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNPKIQT*NVVGFH
Trigger: GTGAAATCCTACCACATTCCATGTCTGAATTTTTGG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATACTACACTGGTTTTTaGAAACAGCCTCCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVYYTGF*KQPPAL
Trigger: GAGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACCTATCCTACTACACTaGTTTTTGGAAACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVPILLH*FLETAS
Trigger: GGAGGCTGTTTCCAAAAACCAGTGTAGTAGGATAGG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGAATTTCCTGGTAAGTaGAAACAGGCAAAGCATACT +
Preference number: 2 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIEFPGK*KQAKHT
Trigger: AGTATGCTTTGCCTGTTTCCACTTACCAGGAAATTC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCAAAAGTAACAGGATaGGCAGCAAAAGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSKVTG*AAKGTA
Trigger: TGCTGTACCTTTTGCTGCCCATCCTGTTACTTTTGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAATACGCTCATTATTTaGACATGGCTAGTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRANTLII*TWLVRK
Trigger: CTTCCTCACTAGCCATGTCCAAATAATGAGCGTATT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYIHLSK*LPVPTK
Trigger: TTTTGTGGGCACTGGAAGTCACTTTGATAGATGGAT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAA +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVIHLSK*LPVPTK
Trigger: TTTTGTGGGCACTGGAAGTCACTTTGATAGATGGAT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACAGGTACAGCAAAGAATaGAAACAGATGCATGGTTAC +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHRYSKE*KQMHGY
Trigger: GTAACCATGCATCTGTTTTCATTCTTTGCTGTACCT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCAGGGCATCTTATATaGACTTGGTTGCACAGAATG +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSGHLI*TWLHRM
Trigger: CATTCTGTGCAACCAAGTGCATATAAGATGCCCTGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTGTGCTCCAGATTGTTaGTTCATATTAAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNICAPDC*FILKDC
Trigger: ACAGTCCTTTAATATGAACCAACAATCTGGAGCACA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATACATTATAGGAAGCTaGCAACATTTCACACCCAAA +
Preference number: 2 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAYIIGS*QHFTPK
Trigger: TTTGGGTGTGAAATGTTGCCAGCTTCCTATAATGTA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGAATTTCCTGGTAAGTaGAAACAGGCAAAGCATACT +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHEFPGK*KQAKHT
Trigger: AGTATGCTTTGCCTGTTTCCACTTACCAGGAAATTC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATCAAAAGTAACAGGATaGGCAGCAAAAGGTACAGCA +
Preference number: 2 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVSKVTG*AAKGTA
Trigger: TGCTGTACCTTTTGCTGCCCATCCTGTTACTTTTGA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGAGTATACCAAGGAATaGAAATTGGAGCAGACAGAA +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHEYTKE*KLEQTE
Trigger: TTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 90 bp AAGCCTTCCTTACTAGGACATACTGAGTATACCAAGGAATGGAAATaGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAA +
Preference number: 2 (lower is better)
Translates to: KPSLLGHTEYTKEWK*EQTEVPFNYHKQCK
Trigger: TTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTCAGTATGTCCTAGTAAGGAAGGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGAAGCACTGAGAGTTTaGGTATTACATTCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHEALRV*VLHSSS
Trigger: ACTTGAAGAATGTAATACTCAAACTCTCAGTGCTTC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCCAAAAATTCAGACATaGAATGTGGTAGGATTTCAC +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHPKIQT*NVVGFH
Trigger: GTGAAATCCTACCACATTCCATGTCTGAATTTTTGG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCATCTTATATGCACTTaGTTGCACAGAATGAGGCTA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYHLICT*LHRMRL
Trigger: TAGCCTCATTCTGTGCAACCAAGTGCATATAAGATG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCCCAATATTTGTCTTaGCATCAGACTTTTACTCCA +
Preference number: 2 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSQYLS*HQTFTP
Trigger: TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCCAAAAATTCAGACATaGAATGTGGTAGGATTTCAC +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYPKIQT*NVVGFH
Trigger: GTGAAATCCTACCACATTCCATGTCTGAATTTTTGG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTACATTATAGGAAGCTaGCAACATTTCACACCCAAA +
Preference number: 2 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYYIIGS*QHFTPK
Trigger: TTTGGGTGTGAAATGTTGCCAGCTTCCTATAATGTA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 3 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCTGTGCAGTGATCCTTaGGGGGATGATGCTTTCACT +
Preference number: 3 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLCSDP*GDDAFT
Trigger: AGTGAAAGCATCATCCCCCAAAGGATCACTGCACAG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTCGGTGTGCTCCAGATaGTTGGTTCATATTAAAGGA +
Preference number: 3 (lower is better)
Translates to: CSSSTRMMELVMRRGKAASVCSR*LVHIKG
Trigger: TCCTTTAATATGAACCAACAATCTGGAGCACACCGA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTCTCCACATCATCACTTaGGTTGTAATTAGGGGTGTT +
Preference number: 3 (lower is better)
Translates to: CSSSTRMMELVMRRGKAALHIIT*VVIRGV
Trigger: AACACCCCTAATTACAACCAAAGTGATGATGTGGAG...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CCA 72 bp TGGCTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTaGCATCAGACTTTTACTCCATTCAGAACAGGGGAG +
Preference number: 3 (lower is better)
Translates to: WLVRKARSQYLS*HQTFTPFRTGE
Trigger: CTCCCCTGTTCTGAATGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACTGTGCAGTGATCCTTaGGGGGATGATGCTTTCACT +
Preference number: 3 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLCSDP*GDDAFT
Trigger: AGTGAAAGCATCATCCCCCAAAGGATCACTGCACAG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGGAAGCACTGAGAGTTaGAGTATTACATTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAGSTES*SITFFK
Trigger: CTTGAAGAATGTAATACTCAAACTCTCAGTGCTTCC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 3 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACTACTACACTGGTTTTaGGAAACAGCCTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLLHWF*ETASCS
Trigger: AGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTAG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAGACAGAATAAAGCTTaGAAATTAAGAATGCTGGGG +
Preference number: 3 (lower is better)
Translates to: CSSSTRMMELVMRRGKAARQNKA*KLRMLG
Trigger: CCCCAGCATTCTTAATTTCAAAGCTTTATTCTGTCT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCTTATATGCACTTGGTaGCACAGAATGAGGCTAAGA +
Preference number: 3 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLICTW*HRMRLR
Trigger: TCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR GCA 72 bp CCTATCCTACTACACTGGTTTTTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTTTCCTCTTCAACTAAG +
Preference number: 3 (lower is better)
Translates to: PILLHWFLETAS*SPCTTLSSSTK
Trigger: CTTAGTTGAAGAGGAAAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTAGGATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTCGGTGTGCTCCAGATaGTTGGTTCATATTAAAGGA +
Preference number: 3 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKSVCSR*LVHIKG
Trigger: TCCTTTAATATGAACCAACAATCTGGAGCACACCGA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGCATCTTATATGCACTaGGTTGCACAGAATGAGGCT +
Preference number: 3 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPASYMH*VAQNEA
Trigger: AGCCTCATTCTGTGCAACCAAGTGCATATAAGATGC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR TCA 72 bp AGGGACAAGAAAGCCATTACTGCACCTGATCTGCACTaGAGGTCCTTCCTAAGACAGTTTGAGAAAGGAAGA +
Preference number: 3 (lower is better)
Translates to: RDKKAITAPDLH*RSFLRQFEKGR
Trigger: TCTTCCTTTCTCAAACTGTCTTAGGAAGGACCTTCAGTGCAGATCAGGTGCAGTAATGGCTTTCTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR GCA 72 bp TATGGAAACAACATGCTGGCTCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTGGCACCATTAGGTAAA +
Preference number: 3 (lower is better)
Translates to: YGNNMLALRNPA*QSKRRLAPLGK
Trigger: TTTACCTAATGGTGCCAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGTTTCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATCGGTGTGCTCCAGATaGTTGGTTCATATTAAAGGA +
Preference number: 3 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPSVCSR*LVHIKG
Trigger: TCCTTTAATATGAACCAACAATCTGGAGCACACCGA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAAGCCACAATTTAGATaGCCCTTCGGTGTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIKPQFR*PFGVLQ
Trigger: CTGGAGCACACCGAAGGGCAATCTAAATTGTGGCTT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGGAAGCACTGAGAGTTaGAGTATTACATTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKGSTES*SITFFK
Trigger: CTTGAAGAATGTAATACTCAAACTCTCAGTGCTTCC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATTAGGAGAATCACCTTaGGTTGATTCTCTTAGGCAG +
Preference number: 3 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLGESP*VDSLRQ
Trigger: CTGCCTAAGAGAATCAACCAAAGGTGATTCTCCTAA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACTTATATGCACTTGGTaGCACAGAATGAGGCTAAGA +
Preference number: 3 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLICTW*HRMRLR
Trigger: TCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTCGGTGTGCTCCAGATaGTTGGTTCATATTAAAGGA +
Preference number: 3 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSVCSR*LVHIKG
Trigger: TCCTTTAATATGAACCAACAATCTGGAGCACACCGA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTGTGCAGTGATCCTTaGGGGGATGATGCTTTCACT +
Preference number: 3 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALCSDP*GDDAFT
Trigger: AGTGAAAGCATCATCCCCCAAAGGATCACTGCACAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGAGACAGAATAAAGCTTaGAAATTAAGAATGCTGGGG +
Preference number: 3 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKRQNKA*KLRMLG
Trigger: CCCCAGCATTCTTAATTTCAAAGCTTTATTCTGTCT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 3 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR TCA 72 bp GGGCAAATAGGAACAGTTTCAATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAACTTAAGTCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: GQIGTVSIHLSK*LPVPTKLKSSG
Trigger: GCCTGAAGACTTAAGTTTTGTGGGCACTGGAAGTCACTTTGATAGATGGATTGAAACTGTTCCTATTTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTTAGGTTTAACTGGTTaGCCCTCATCAGGTTTTCGC +
Preference number: 3 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLGLTG*PSSGFR
Trigger: GCGAAAACCTGATGAGGGCAAACCAGTTAAACCTAA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTTAGGTTTAACTGGTTaGCCCTCATCAGGTTTTCGC +
Preference number: 3 (lower is better)
Translates to: LIDRNRPRANRNSFNPSILGLTG*PSSGFR
Trigger: GCGAAAACCTGATGAGGGCAAACCAGTTAAACCTAA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGGAAGCACTGAGAGTTaGAGTATTACATTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNGSTES*SITFFK
Trigger: CTTGAAGAATGTAATACTCAAACTCTCAGTGCTTCC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCTACTACACTGGTTTTaGGAAACAGCCTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILLHWF*ETASCS
Trigger: AGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTAG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTACTACACTGGTTTTaGGAAACAGCCTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALLHWF*ETASCS
Trigger: AGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGAGAATCACCTTTGGTaGATTCTCTTAGGCAGACAG +
Preference number: 3 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIENHLW*ILLGRQ
Trigger: CTGTCTGCCTAAGAGAATCAACCAAAGGTGATTCTC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGAGAATCACCTTTGGTaGATTCTCTTAGGCAGACAG +
Preference number: 3 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNENHLW*ILLGRQ
Trigger: CTGTCTGCCTAAGAGAATCAACCAAAGGTGATTCTC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR GCA 72 bp AGTCCTTCAAGCCACAATTTAGATTGCCCTTCGGTGTaGTCCAGATTGTTGGTTCATATTAAAGGACTGTTT +
Preference number: 3 (lower is better)
Translates to: SPSSHNLDCPSV*SRLLVHIKGLF
Trigger: AAACAGTCCTTTAATATGAACCAACAATCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCTTGAAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR GCA 72 bp AAGCATACTTTGTTACTCTTTTCAGGGCATCTTATATaGACTTGGTTGCACAGAATGAGGCTAAGAGGGAAC +
Preference number: 3 (lower is better)
Translates to: KHTLLLFSGHLI*TWLHRMRLRGN
Trigger: GTTCCCTCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAGATGCCCTGAAAAGAGTAACAAAGTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCTACTACACTGGTTTTaGGAAACAGCCTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLLHWF*ETASCS
Trigger: AGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTAG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCTCCACATCATCACTTaGGTTGTAATTAGGGGTGTT +
Preference number: 3 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLHIIT*VVIRGV
Trigger: AACACCCCTAATTACAACCAAAGTGATGATGTGGAG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGCATCTTATATGCACTaGGTTGCACAGAATGAGGCT +
Preference number: 3 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAASYMH*VAQNEA
Trigger: AGCCTCATTCTGTGCAACCAAGTGCATATAAGATGC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCTGAGAAATCCAGCTaGCCAAAGCAAAAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSEKSS*PKQKEA
Trigger: AGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTTAGGAGAATCACCTTaGGTTGATTCTCTTAGGCAG +
Preference number: 3 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILGESP*VDSLRQ
Trigger: CTGCCTAAGAGAATCAACCAAAGGTGATTCTCCTAA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 3 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTTATATGCACTTGGTaGCACAGAATGAGGCTAAGA +
Preference number: 3 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALICTW*HRMRLR
Trigger: TCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCATCTTATATGCACTaGGTTGCACAGAATGAGGCT +
Preference number: 3 (lower is better)
Translates to: SLSTISSLRSINYSVNVHASYMH*VAQNEA
Trigger: AGCCTCATTCTGTGCAACCAAGTGCATATAAGATGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCAGGCAAAGCATACTTaGTTACTCTTTTCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIQAKHT*LLFSGH
Trigger: ATGCCCTGAAAAGAGTAACAAAGTATGCTTTGCCTG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCTCGCTCCCAATATTaGTCTTGGCATCAGACTTTT +
Preference number: 3 (lower is better)
Translates to: SLSTISSLRSINYSVNVHARSQY*SWHQTF
Trigger: AAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR TCA 72 bp TTTGATAAAACACACAGTCTAGTAGTCAATCCCTACTaGGGATATCACCTAGCATACACGACATACAGACAG +
Preference number: 3 (lower is better)
Translates to: FDKTHSLVVNPY*GYHLAYTTYRQ
Trigger: CTGTCTGTATGTCGTGTATGCTAGGTGATATCCTCAGTAGGGATTGACTACTAGACTGTGTGTTTTATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CCA 72 bp CCTTCCTTACTAGGACATACTGAGTATACCAAGGAATaGAAATTGGAGCAGACAGAAGTACCCTTCAATTAT +
Preference number: 3 (lower is better)
Translates to: PSLLGHTEYTKE*KLEQTEVPFNY
Trigger: ATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTCAGTATGTCCTAGTAAGGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTTAGGTTTAACTGGTTaGCCCTCATCAGGTTTTCGC +
Preference number: 3 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYLGLTG*PSSGFR
Trigger: GCGAAAACCTGATGAGGGCAAACCAGTTAAACCTAA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGGAAGCACTGAGAGTTaGAGTATTACATTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIGSTES*SITFFK
Trigger: CTTGAAGAATGTAATACTCAAACTCTCAGTGCTTCC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCTCCACATCATCACTTaGGTTGTAATTAGGGGTGTT +
Preference number: 3 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLHIIT*VVIRGV
Trigger: AACACCCCTAATTACAACCAAAGTGATGATGTGGAG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAGACAGAATAAAGCTTaGAAATTAAGAATGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIRQNKA*KLRMLG
Trigger: CCCCAGCATTCTTAATTTCAAAGCTTTATTCTGTCT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGAGAATCACCTTTGGTaGATTCTCTTAGGCAGACAG +
Preference number: 3 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYENHLW*ILLGRQ
Trigger: CTGTCTGCCTAAGAGAATCAACCAAAGGTGATTCTC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCTTATATGCACTTGGTaGCACAGAATGAGGCTAAGA +
Preference number: 3 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLICTW*HRMRLR
Trigger: TCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGGTGAAAACCTTCCTTaGATAGATAGAAACCGTCCC +
Preference number: 3 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYGENLP*IDRNRP
Trigger: GGGACGGTTTCTATCTATCAAAGGAAGGTTTTCACC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTGGGAACCATAATTTaGCCTGTGTCAGATTACAAT +
Preference number: 3 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVGTII*PVSDYN
Trigger: ATTGTAATCTGACACAGGCAAAATTATGGTTCCCAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCTCCACATCATCACTTaGGTTGTAATTAGGGGTGTT +
Preference number: 3 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYLHIIT*VVIRGV
Trigger: AACACCCCTAATTACAACCAAAGTGATGATGTGGAG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATTAGGAGAATCACCTTaGGTTGATTCTCTTAGGCAG +
Preference number: 3 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVLGESP*VDSLRQ
Trigger: CTGCCTAAGAGAATCAACCAAAGGTGATTCTCCTAA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR GCA 72 bp CAATTTCTATATACAGTAAAAGTGCTGCTGAGAATCTaGAGCGACCAGACAGAACATAAATTTAAATCTCTC +
Preference number: 3 (lower is better)
Translates to: QFLYTVKVLLRI*SDQTEHKFKSL
Trigger: GAGAGATTTAAATTTATGTTCTGTCTGGTCGCTGCAGATTCTCAGCAGCACTTTTACTGTATATAGAAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
3UTR TCA 72 bp AATCCTATTAGAAACCATAAGGAAGCACTGAGAGTTTaGGTATTACATTCTTCAAGTATGCTGTTCGGATTT +
Preference number: 3 (lower is better)
Translates to: NPIRNHKEALRV*VLHSSSMLFGF
Trigger: AAATCCGAACAGCATACTTGAAGAATGTAATACTCAAACTCTCAGTGCTTCCTTATGGTTTCTAATAGGATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGCCTCCAGGGCCTCCTaGATGTCCCGGGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAASRAS*MSRARS
Trigger: TGAACGGGCCCGGGACATCCAGGAGGCCCTGGAGGC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTCGAGCTCAAGCGCCTaGTCCTTCCACTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAASSSSA*SFHCGR
Trigger: GCGGCCGCAGTGGAAGGAGCAGGCGCTTGAGCTCGA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGCAGCCTTTGTGCGCTaGGGGTCTGGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAAAFVR*GSGVPS
Trigger: GGATGGAACACCAGACCCTCAGCGCACAAAGGCTGC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTTGGAGATGCGCGTCTaGCATGCCTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLEMRV*HASRAS
Trigger: GGAGGCCCTGGAGGCATGCCAGACGCGCATCTCCAA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAATCTCTCTGGGCTTTaGGACTACAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAANLSGL*DYSACC
Trigger: GCAGCAGGCGCTGTAGTCTCAAAGCCCAGAGAGATT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGCCTGCTCCTTCCACTaGGGCCGCCGCACCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNACSFH*GRRTRS
Trigger: GGACCGGGTGCGGCGGCCGCAGTGGAAGGAGCAGGC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTCTGCTGCTGAATGGGTaGCCTGGGAGAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAALLLNG*PGRSWK
Trigger: TTTCCAGCTTCTCCCAGGCCACCCATTCAGCAGCAG...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCGCCTGCTGCTGAATaGGTGGCCTGGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKAPAAE*VAWEKL
Trigger: CAGCTTCTCCCAGGCCACCCATTCAGCAGCAGGCGC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCCTCCAGGGCCTCCTaGATGTCCCGGGCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNASRAS*MSRARS
Trigger: TGAACGGGCCCGGGACATCCAGGAGGCCCTGGAGGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCCTTTGTGCGCTaGGGGTCTGGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKAAFVR*GSGVPS
Trigger: GGATGGAACACCAGACCCTCAGCGCACAAAGGCTGC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGCGCATTCTACAACCTaGACAATCACCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAAHSTT*TITQAN
Trigger: GTTGGCCTGGGTGATTGTTCAGGTTGTAGAATGCGC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTTGGGGCCTCTGGCTTaGCCCGCCTACTATGCAAGC +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKLGPLA*PAYYAS
Trigger: GCTTGCATAGTAGGCGGGGCAAGCCAGAGGCCCCAA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGCACCCTTGTGGCCCTaGTCTGGGTGCAGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSAPLWP*SGCSFE
Trigger: CTCAAAACTGCACCCAGAGCAGGGCCACAAGGGTGC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTGGAGGCCACTGCACTaGATGTTTGGGCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSWRPLH*MFGQGC
Trigger: GCAGCCTTGCCCAAACATCCAGTGCAGTGGCCTCCA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGGGGGACCACACAGTTaGCTACAGTGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAGGPHS*LQWRQR
Trigger: TCTTTGTCTCCACTGTAGCCAACTGTGTGGTCCCCC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTACTGCAGAGGAGCTGTaGCATAGTCTGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAATAEEL*HSLSLL
Trigger: CAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAATCTCTCTGGGCTTTaGGACTACAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSNLSGL*DYSACC
Trigger: GCAGCAGGCGCTGTAGTCTCAAAGCCCAGAGAGATT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCAGCTGAGGTTGGGGTaGAGACTGGAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSQLRLG*RLEYLS
Trigger: ACTCAGGTACTCCAGTCTTCACCCCAACCTCAGCTG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAGCCATTACTGCACCTaGTCTGCACTGAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAASHYCT*SALKVL
Trigger: AAGGACCTTCAGTGCAGATCAGGTGCAGTAATGGCT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCAGAGTCTGTGTGGATaGTGCCATCGGTACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSQSLCG*CHRYWR
Trigger: CCTCCAGTACCGATGGCAGCATCCACACAGACTCTG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCAATGGCAGCCTTTGTaGGCTGAGGGTCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSQWQPL*AEGLVF
Trigger: GAACACCAGACCCTCAGCGCACAAAGGCTGCCATTG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGACCTGCTGCTGCTGCTaGTGCAGCTCCATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKTCCCC*CSSILE
Trigger: CTCCAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAALETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGTGCTGCTGAGAATCTaGAGCGACCAGACAGAACAT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAVLLRI*SDQTEH
Trigger: ATGTTCTGTCTGGTCGCTGCAGATTCTCAGCAGCAC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCAGCCTTTGTGCGCTaGGGGTCTGGTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNAAFVR*GSGVPS
Trigger: GGATGGAACACCAGACCCTCAGCGCACAAAGGCTGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGCGCATTCTACAACCTaGACAATCACCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSAHSTT*TITQAN
Trigger: GTTGGCCTGGGTGATTGTTCAGGTTGTAGAATGCGC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTCGAGCTCAAGCGCCTaGTCCTTCCACTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSISSSSA*SFHCGR
Trigger: GCGGCCGCAGTGGAAGGAGCAGGCGCTTGAGCTCGA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTTGGGGCCTCTGGCTTaGCCCGCCTACTATGCAAGC +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNLGPLA*PAYYAS
Trigger: GCTTGCATAGTAGGCGGGGCAAGCCAGAGGCCCCAA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGAGTCTGTGTGGATGCTaGCATCGGTACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKSLCGC*HRYWRP
Trigger: TGGCCTCCAGTACCGATGGCAGCATCCACACAGACT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAACCACCTGCTGCTGCTaGTGCTGCAGCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPTTCCC*CCSSIL
Trigger: CAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGTGGT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTCCAGCCCTTCTAGCTaGACCACCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSSPSS*TTCCCC
Trigger: GCAGCAGCAGCAGGTGGTGCAGCTAGAAGGGCTGGA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSCLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGATTGCCCTTCGGTGTaGTCCAGATTGTTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAADCPSV*SRLLVH
Trigger: ATGAACCAACAATCTGGAGCACACCGAAGGGCAATC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAALRNPA*QSKRRL
Trigger: CAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAG...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTCCCTTTGGGGCCTCTaGCTTGCCCCGCCTACTATG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSLWGL*LAPPTM
Trigger: CATAGTAGGCGGGGCAAGCCAGAGGCCCCAAAGGGA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGTGAGGCAATCTCTCTaGGCTTTGAGACTACAGCGC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSVRQSL*ALRLQR
Trigger: GCGCTGTAGTCTCAAAGCCCAGAGAGATTGCCTCAC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTGTTTGTTTTGGAGCTaGATGCTCCTACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAACLFWS*MLLQRC
Trigger: GCATCGCTGTAGGAGCATCCAGCTCCAAAACAAACA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAAGGAGCCAGTAGAGTaGAAAGCCTTCCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAKEPVE*KAFLTR
Trigger: CCTAGTAAGGAAGGCTTTCCACTCTACTGGCTCCTT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGACCAGACTTCCTGTTaGTTTGGGGACTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSDQTSC*FGDFPL
Trigger: CAAAGGGAAGTCCCCAAATCAACAGGAAGTCTGGTC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAATCTCTCTGGGCTTTaGGACTACAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPNLSGL*DYSACC
Trigger: GCAGCAGGCGCTGTAGTCTCAAAGCCCAGAGAGATT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGGGGGCTCTCTACTCTaGGCAATTACGCTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKGGSLL*AITLKQ
Trigger: CTGCTTTAGCGTAATTGCTCAGAGTAGAGAGCCCCC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGGGGCTTTCTACAGGTaGAAACCTTCCTTTGATAGA +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAGAFYR*KPSFDR
Trigger: TCTATCAAAGGAAGGTTTTCACCTGTAGAAAGCCCC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACGGGGGATCCCATTCTaGTCTACCTCTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPRGIPF*STSLSF
Trigger: GAAGCTCAGAGAGGTAGAGCAGAATGGGATCCCCCG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACATGCTCCTACAGCGATaGCCCCTGTGGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNMLLQR*PLWCCW
Trigger: CCAACAGCACCACAGGGGGCATCGCTGTAGGAGCAT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTCAAATCCTGAGCTCTaGATGTCCAGGGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAASNPEL*MSRVFV
Trigger: AACAAACACCCTGGACATGCAGAGCTCAGGATTTGA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGATGCGCGTCTGGCATaGCTCCAGGGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNDARLA*LQGLLD
Trigger: ATCCAGGAGGCCCTGGAGGCATGCCAGACGCGCATC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATGCTGCTGCTGCTGCTaGAGCTCCATCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPCCCCC*SSILEM
Trigger: CATCTCCAAGATGGAGCTGCAGCAGCAGCAGCAGCA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAAGAGGGCGTCCCAGTaGTTCCAGAGAAAGGCAATA +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSKRASQ*FQRKAI
Trigger: TATTGCCTTTCTCTGGAAGCACTGGGACGCCCTCTT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGTCCTTTGGCACTCCTaGCTAAAAAGTCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAVLWHS*LKSHCN
Trigger: ATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGAC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTCCACAGAGTCTGTGTaGATGCTGCCATCGGTACTG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKSTESV*MLPSVL
Trigger: CAGTACCGATGGCAGCATCCACACAGACTCTGTGGA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTTGGAGATGCGCGTCTaGCATGCCTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSILEMRV*HASRAS
Trigger: GGAGGCCCTGGAGGCATGCCAGACGCGCATCTCCAA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCCAGCCCAAGATCACTaGGTGAACGTTTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKPAQDH*VNVFLG
Trigger: CCCCAAGAAAACGTTCACCCAGTGATCTTGGGCTGG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp GGAGGCAGGGGGCTTTCTACAGGTGAAAACCTTCCTTaGATAGATAGAAACCGTCCCAGGGCAAATAGGAAC +
Preference number: 4 (lower is better)
Translates to: GGRGLSTGENLP*IDRNRPRANRN
Trigger: GTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAAAGGAAGGTTTTCACCTGTAGAAAGCCCCCTGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTTTGTTCCGAATGAGTaGGGCAATCTCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSFVPNE*GNLSGL
Trigger: AAGCCCAGAGAGATTGCCTCACTCATTCGGAACAAA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTACAACATGCTGGCTCTaGGAAATCCAGCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSTTCWL*EIQLAK
Trigger: TTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCAGCTGAGGTTGGGGTaGAGACTGGAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNQLRLG*RLEYLS
Trigger: ACTCAGGTACTCCAGTCTTCACCCCAACCTCAGCTG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTATGTTTGGGCAAGGCTaGTTACTTCCAACCGTTCGA +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSMFGQG*LLPTVR
Trigger: TCGAACGGTTGGAAGTAAGCAGCCTTGCCCAAACAT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAGCCTGCTGTTTGTCTaGACTGTTGGCAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSSLLFV*TVGKLQ
Trigger: TTGAAGCTTGCCAACAGTGCAGACAAACAGCAGGCT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGATGCGCGTCTGGCATaGCTCCAGGGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRADARLA*LQGLLD
Trigger: ATCCAGGAGGCCCTGGAGGCATGCCAGACGCGCATC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTCTAGCTGCACCACCTaGTGCTGCTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSISSCTT*CCCCCS
Trigger: GCTGCAGCAGCAGCAGCAGCAGGTGGTGCAGCTAGA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTCTAGCTGCACCACCTaGTGCTGCTGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSSCTT*CCCCCS
Trigger: GCTGCAGCAGCAGCAGCAGCAGGTGGTGCAGCTAGA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATCCACAGAGTCTGTGTaGATGCTGCCATCGGTACTG +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPSTESV*MLPSVL
Trigger: CAGTACCGATGGCAGCATCCACACAGACTCTGTGGA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGCGCCTGCTGCTGAATaGGTGGCCTGGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIAPAAE*VAWEKL
Trigger: CAGCTTCTCCCAGGCCACCCATTCAGCAGCAGGCGC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTTGGAGATGCGCGTCTaGCATGCCTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILEMRV*HASRAS
Trigger: GGAGGCCCTGGAGGCATGCCAGACGCGCATCTCCAA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGTTCATAGTGTCCTTTaGCACTCCTGCCTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAVHSVL*HSCLKS
Trigger: ACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAAC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCAGCATGGGACTATTTaGCTGGAGGCAGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNQHGTI*LEAGGF
Trigger: AAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCTCATTATTTGGACATaGCTAGTGAGGAAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLIIWT*LVRKAR
Trigger: GCGAGCCTTCCTCACTAGCCATGTCCAAATAATGAG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp GAGCCCAGACAAGGCAGGGTGTTAGGTTTAACTGGTTaGCCCTCATCAGGTTTTCGCATCTTTTTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: EPRQGRVLGLTG*PSSGFRIFLVG
Trigger: ACCCACTAAAAAGATGCGAAAACCTGATGAGGGCAAACCAGTTAAACCTAACACCCTGCCTTGTCTGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATACCGTTCCACATAGCTaGAGAGGGCGTCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNTVPHS*RGRPSA
Trigger: AGCACTGGGACGCCCTCTTCAGCTATGTGGAACGGT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGGGGGCTCTCTACTCTaGGCAATTACGCTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNGGSLL*AITLKQ
Trigger: CTGCTTTAGCGTAATTGCTCAGAGTAGAGAGCCCCC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCACCTGATCTGCACTaGAGGTCCTTCCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNAPDLH*RSFLRQ
Trigger: CTGTCTTAGGAAGGACCTTCAGTGCAGATCAGGTGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAACTTCTGGGTCTGGTaGATAATTAAGGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAANFWVW*IIKGQE
Trigger: TTCTTGTCCCTTAATTATTCACCAGACCCAGAAGTT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCGCATTCTACAACCTaGACAATCACCCAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNAHSTT*TITQAN
Trigger: GTTGGCCTGGGTGATTGTTCAGGTTGTAGAATGCGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACAGCACTTTAGGAAGCTaGGGAGGGTGGATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSTLGS*GGWIAW
Trigger: CCAAGCAATCCACCCTCCTCAGCTTCCTAAAGTGCT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR TCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTACAACTTTAAAGTGCTaGAAAGAAAACTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAATTLKC*KENCPS
Trigger: GGATGGGCAGTTTTCTTTTCAGCACTTTAAAGTTGT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGTTGGGGATGTTGTCTaGACTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKVGDVV*TAKFVP
Trigger: CGGAACAAATTTGGCAGTGCAGACAACATCCCCAAC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATATGCTCCTACAGCGATaGCCCCTGTGGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNMLLQR*PLWCCW
Trigger: CCAACAGCACCACAGGGGGCATCGCTGTAGGAGCAT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCACCTGCTGCTGCTGCTaGTGCAGCTCCATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSITCCCC*CSSILE
Trigger: CTCCAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATACCACCTGCTGCTGCTaGTGCTGCAGCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNTTCCC*CCSSIL
Trigger: CAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGTGGT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTCCAGCCCTTCTAGCTaGACCACCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISSPSS*TTCCCC
Trigger: GCAGCAGCAGCAGGTGGTGCAGCTAGAAGGGCTGGA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAAGAGGGCGTCCCAGTaGTTCCAGAGAAAGGCAATA +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPKRASQ*FQRKAI
Trigger: TATTGCCTTTCTCTGGAAGCACTGGGACGCCCTCTT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTGGCCCTGCTCTGGGTaGAGTTTTGAGGGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIWPCSG*SFEGAT
Trigger: TGTTGCCCCCTCAAAACTGCACCCAGAGCAGGGCCA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAAGCATCCGTGTGTGTaGGCGCGCACGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIKHPCV*ARTQFA
Trigger: AGCAAACTGCGTGCGCGCGCACACACACGGATGCTT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTATAGTCTGTCACTGCTaGACATACTTGGTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSIVCHC*TYLVSE
Trigger: CTCGGAAACCAAGTATGTGCAGCAGTGACAGACTAT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR GCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGGATTTGAACAAGCATaGTCTTCCAACCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAGFEQA*SSNHLC
Trigger: ACAAAGATGGTTGGAAGAGCATGCTTGTTCAAATCC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCGCCTGCTGCTGAATaGGTGGCCTGGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHAPAAE*VAWEKL
Trigger: CAGCTTCTCCCAGGCCACCCATTCAGCAGCAGGCGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGTGAGGCAATCTCTCTaGGCTTTGAGACTACAGCGC +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNVRQSL*ALRLQR
Trigger: GCGCTGTAGTCTCAAAGCCCAGAGAGATTGCCTCAC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTCCTCTAGTCTGGCCTaGGTTTCCCGGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSSSLA*VSRISW
Trigger: CCAGGAGATCCGGGAAACCCAGGCCAGACTAGAGGA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCCAGCCCAAGATCACTaGGTGAACGTTTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNPAQDH*VNVFLG
Trigger: CCCCAAGAAAACGTTCACCCAGTGATCTTGGGCTGG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACATGGGACTATTTGGCTaGAGGCAGGGGGCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNMGLFG*RQGAFY
Trigger: GTAGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCAT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCCCAGGCTAGAGGCATaGACAAATAAACCAGGAATG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKPRLEA*TNKPGM
Trigger: CATTCCTGGTTTATTTGTCCATGCCTCTAGCCTGGG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGAAGGCAGCTCCTCATTaGAACTCTCTCAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKKAAPH*NSLRTQ
Trigger: CTGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGGTTTCATTTGGGGTTaGGGTGTGGGAACCATAATT +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSGFIWG*GVGTII
Trigger: AATTATGGTTCCCACACCCCAACCCCAAATGAAACC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTACTGCTGCACATACTTaGTTTCCGAGAATAACGCTG +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSTAAHT*FPRITL
Trigger: CAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCAAATTTGTTCCGAATaGGTGAGGCAATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKQICSE*VRQSLW
Trigger: CCAGAGAGATTGCCTCACTCATTCGGAACAAATTTG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTGGGTCCTGCTAACCTaGCATTTCCTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNWVLLT*HFLHCS
Trigger: AGAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCTCAGCATTTTCATCTaGCTGTACCTCAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLSIFI*LYLKGT
Trigger: TGTTCCTTTGAGGTACAGTCAGATGAAAATGCTGAG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGTAGTCAATCCCTACTaGGGATATCACCTAGCATAC +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKVVNPY*GYHLAY
Trigger: GTATGCTAGGTGATATCCTCAGTAGGGATTGACTAC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGTCTGTGTGGATGCTaGCATCGGTACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSLCGC*HRYWRP
Trigger: TGGCCTCCAGTACCGATGGCAGCATCCACACAGACT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCAATGGCAGCCTTTGTaGGCTGAGGGTCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNQWQPL*AEGLVF
Trigger: GAACACCAGACCCTCAGCGCACAAAGGCTGCCATTG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCCGGGGGATCCCATTCTaGTCTACCTCTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIRGIPF*STSLSF
Trigger: GAAGCTCAGAGAGGTAGAGCAGAATGGGATCCCCCG...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGATGCGCGTCTGGCATaGCTCCAGGGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVDARLA*LQGLLD
Trigger: ATCCAGGAGGCCCTGGAGGCATGCCAGACGCGCATC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTGCTGCTGCTGCTGCTaGAGCTCCATCTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSICCCCC*SSILEM
Trigger: CATCTCCAAGATGGAGCTGCAGCAGCAGCAGCAGCA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCCAGCCCTTCTAGCTaGACCACCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSSPSS*TTCCCC
Trigger: GCAGCAGCAGCAGGTGGTGCAGCTAGAAGGGCTGGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTTGGAAACAGCCTCCTaGTCTCCTTGCACAACCCTT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNLETAS*SPCTTL
Trigger: AAGGGTTGTGCAAGGAGAGCAGGAGGCTGTTTCCAA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTCAGGGCATCTTATATaGACTTGGTTGCACAGAATG +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSSGHLI*TWLHRM
Trigger: CATTCTGTGCAACCAAGTGCATATAAGATGCCCTGA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGGCATAGTCTGTCACTaGTGCACATACTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPGIVCH*CTYLVS
Trigger: GGAAACCAAGTATGTGCAGCAGTGACAGACTATGCC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCTGCTGCTGAATGGGTaGCCTGGGAGAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLLLNG*PGRSWK
Trigger: TTTCCAGCTTCTCCCAGGCCACCCATTCAGCAGCAG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGGTGTTAGGTTTAACTaGTTTGCCCTCATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSGVRFN*FALIRF
Trigger: AAACCTGATGAGGGCAAACCAGTTAAACCTAACACC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACCCAGGCTAGAGGCATaGACAAATAAACCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPPRLEA*TNKPGM
Trigger: CATTCCTGGTTTATTTGTCCATGCCTCTAGCCTGGG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTTCCCAATATTTGTCTTaGCATCAGACTTTTACTCCA +
Preference number: 4 (lower is better)
Translates to: CSSSTRMMELVMRRGKAASQYLS*HQTFTP
Trigger: TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGA...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp ATGGCTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTaGGCATCAGACTTTTACTCCATTCAGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: MASEEGSLPIFV*ASDFYSIQNRG
Trigger: TCCCCTGTTCTGAATGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTTTGTTCCGAATGAGTaGGGCAATCTCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNFVPNE*GNLSGL
Trigger: AAGCCCAGAGAGATTGCCTCACTCATTCGGAACAAA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTATTTTGGGCTAGACTaGAAGTTTGAAATCACTCCC +
Preference number: 4 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSYFGLD*KFEITP
Trigger: GGGAGTGATTTCAAACTTTCAGTCTAGCCCAAAATA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACACCGTTCCACATAGCTaGAGAGGGCGTCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHTVPHS*RGRPSA
Trigger: AGCACTGGGACGCCCTCTTCAGCTATGTGGAACGGT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCAGCTGAGGTTGGGGTaGAGACTGGAGTACCTGAGT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIQLRLG*RLEYLS
Trigger: ACTCAGGTACTCCAGTCTTCACCCCAACCTCAGCTG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGCACCTGATCTGCACTaGAGGTCCTTCCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNAPDLH*RSFLRQ
Trigger: CTGTCTTAGGAAGGACCTTCAGTGCAGATCAGGTGC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAGAGGAGCATTCAAATaGGGGGACGTTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIRGAFK*GDVSTQ
Trigger: CTGGGTGGAAACGTCCCCTCATTTGAATGCTCCTCT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGTAGTCAATCCCTACTaGGGATATCACCTAGCATAC +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPVVNPY*GYHLAY
Trigger: GTATGCTAGGTGATATCCTCAGTAGGGATTGACTAC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGGCACTCGAATCTGCTaGAGGACACGATTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIGTRIC*RTRFRA
Trigger: AGCTCTGAATCGTGTCCTGCAGCAGATTCGAGTGCC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGGTACTGGAGGCCACTaGACTGGATGTTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAGTGGH*TGCLGK
Trigger: CTTGCCCAAACATCCAGTGCAGTGGCCTCCAGTACC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTAGTCTGTGTGGATGCTaGCATCGGTACTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISLCGC*HRYWRP
Trigger: TGGCCTCCAGTACCGATGGCAGCATCCACACAGACT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACAGCCTGCTGTTTGTCTaGACTGTTGGCAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSLLFV*TVGKLQ
Trigger: TTGAAGCTTGCCAACAGTGCAGACAAACAGCAGGCT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTTGATGCGGGCAGCCTaGTGTTTGTCTGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLMRAA*CLSALL
Trigger: CAACAGTGCAGACAAACAGCAGGCTGCCCGCATCAA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACACCTGCTGCTGCTGCTaGTGCAGCTCCATCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHTCCCC*CSSILE
Trigger: CTCCAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACACCACCTGCTGCTGCTaGTGCTGCAGCTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHTTCCC*CCSSIL
Trigger: CAAGATGGAGCTGCAGCAGCAGCAGCAGCAGGTGGT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNCLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCACCCTTGTGGCCCTaGTCTGGGTGCAGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHAPLWP*SGCSFE
Trigger: CTCAAAACTGCACCCAGAGCAGGGCCACAAGGGTGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCCCTTTGGGGCCTCTaGCTTGCCCCGCCTACTATG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSLWGL*LAPPTM
Trigger: CATAGTAGGCGGGGCAAGCCAGAGGCCCCAAAGGGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCTGCTGCTGAATGGGTaGCCTGGGAGAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILLLNG*PGRSWK
Trigger: TTTCCAGCTTCTCCCAGGCCACCCATTCAGCAGCAG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCCTCTAGTCTGGCCTaGGTTTCCCGGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSSSLA*VSRISW
Trigger: CCAGGAGATCCGGGAAACCCAGGCCAGACTAGAGGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGGGGGACCACACAGTTaGCTACAGTGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNGGPHS*LQWRQR
Trigger: TCTTTGTCTCCACTGTAGCCAACTGTGTGGTCCCCC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp CATTATAGGAAGCTGGCAACATTTCACACCCAAAACTaGGGTCCTGCTAACCTGACATTTCCTTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: HYRKLATFHTQN*GPANLTFPSLL
Trigger: GAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAATGTTGCCAGCTTCCTATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACACCGTTCCACATAGCTaGAGAGGGCGTCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYTVPHS*RGRPSA
Trigger: AGCACTGGGACGCCCTCTTCAGCTATGTGGAACGGT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCATCATCTAGGGGATaGAAAGAACCGTTCCACATA +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNASSRG*KEPFHI
Trigger: TATGTGGAACGGTTCTTTTCATCCCCTAGATGATGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAGTGGCCAACTTGGGTaGGAAAGCCAGAGAGATCCA +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRASGQLG*ESQRDP
Trigger: TGGATCTCTCTGGCTTTCTCACCCAAGTTGGCCACT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTAGTGGCCAACTTGGGTaGGAAAGCCAGAGAGATCCA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISGQLG*ESQRDP
Trigger: TGGATCTCTCTGGCTTTCTCACCCAAGTTGGCCACT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCCCAAGATCACTGGGTaGACGTTTTCTTGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNPKITG*TFSWGK
Trigger: TTTGCCCCAAGAAAACGTTCACCCAGTGATCTTGGG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGGGGCTTTCTACAGGTaGAAACCTTCCTTTGATAGA +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNGAFYR*KPSFDR
Trigger: TCTATCAAAGGAAGGTTTTCACCTGTAGAAAGCCCC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGCCATTACTGCACCTaGTCTGCACTGAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSHYCT*SALKVL
Trigger: AAGGACCTTCAGTGCAGATCAGGTGCAGTAATGGCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAGCCATTACTGCACCTaGTCTGCACTGAAGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSISHYCT*SALKVL
Trigger: AAGGACCTTCAGTGCAGATCAGGTGCAGTAATGGCT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGAACTTCTGGGTCTGGTaGATAATTAAGGGACAAGAA +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKNFWVW*IIKGQE
Trigger: TTCTTGTCCCTTAATTATTCACCAGACCCAGAAGTT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGAGGTACAGCAAAGAATaGAAACAGATGCATGGTTAC +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKRYSKE*KQMHGY
Trigger: GTAACCATGCATCTGTTTTCATTCTTTGCTGTACCT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGAGATTAATACCTGCTaGCCACGGCTGGACACAGTG +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAEINTC*PRLDTV
Trigger: CACTGTGTCCAGCCGTGGTCAGCAGGTATTAATCTC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTTGCCCCGCCTACTATaGAAGCTTGTCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILPRLL*KLVPLF
Trigger: GAAGAGAGGGACAAGCTTGCATAGTAGGCGGGGCAA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGTACTGGAGGCCACTaGACTGGATGTTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGTGGH*TGCLGK
Trigger: CTTGCCCAAACATCCAGTGCAGTGGCCTCCAGTACC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATTGATGCGGGCAGCCTaGTGTTTGTCTGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALMRAA*CLSALL
Trigger: CAACAGTGCAGACAAACAGCAGGCTGCCCGCATCAA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTGTCTAACTCTCTGCTaGATGCACTCGCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNICLTLC*MHSPEG
Trigger: ACCCTCTGGCGAGTGCATGCAGCAGAGAGTTAGACA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGCACCCTTGTGGCCCTaGTCTGGGTGCAGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYAPLWP*SGCSFE
Trigger: CTCAAAACTGCACCCAGAGCAGGGCCACAAGGGTGC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGTGCTGCTGAGAATCTaGAGCGACCAGACAGAACAT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNVLLRI*SDQTEH
Trigger: ATGTTCTGTCTGGTCGCTGCAGATTCTCAGCAGCAC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGTGAGGCAATCTCTCTaGGCTTTGAGACTACAGCGC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIVRQSL*ALRLQR
Trigger: GCGCTGTAGTCTCAAAGCCCAGAGAGATTGCCTCAC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGGGGGACCACACAGTTaGCTACAGTGGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIGGPHS*LQWRQR
Trigger: TCTTTGTCTCCACTGTAGCCAACTGTGTGGTCCCCC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGGTGTTAGGTTTAACTaGTTTGCCCTCATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPGVRFN*FALIRF
Trigger: AAACCTGATGAGGGCAAACCAGTTAAACCTAACACC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCCGTAAGTGGCCAACTTaGGTGAGAAAGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIRKWPT*VRKPER
Trigger: TCTCTCTGGCTTTCTCACCCAAGTTGGCCACTTACG...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCATCTTATATGCACTTaGTTGCACAGAATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKHLICT*LHRMRL
Trigger: TAGCCTCATTCTGTGCAACCAAGTGCATATAAGATG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTATGGGACTATTTGGCTaGAGGCAGGGGGCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIMGLFG*RQGAFY
Trigger: GTAGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCAT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCAGCATGGGACTATTTaGCTGGAGGCAGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHQHGTI*LEAGGF
Trigger: AAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGGTTTCATTTGGGGTTaGGGTGTGGGAACCATAATT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNGFIWG*GVGTII
Trigger: AATTATGGTTCCCACACCCCAACCCCAAATGAAACC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp TGGGTTTTAGTGCAGTCCTTCAAGCCACAATTTAGATaGCCCTTCGGTGTGCTCCAGATTGTTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: WVLVQSFKPQFR*PFGVLQIVGSY
Trigger: ATATGAACCAACAATCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCTTGAAGGACTGCACTAAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACATCTTCTGCTGCAGGTaGGCAATGGCAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHIFCCR*AMAAFV
Trigger: CACAAAGGCTGCCATTGCTCACCTGCAGCAGAAGAT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTGGAAAACCCACCTTTaGCACTATCCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNWKTHL*HYPPHL
Trigger: AAGGTGTGGTGGATAGTGTCAAAGGTGGGTTTTCCA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCAAGGAATAAAGTGCTaGACGTCCTGTTGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNQGIKC*TSCCES
Trigger: AGACTCGCAACAGGACGTTCAGCACTTTATTCCTTG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCACCTGATCTGCACTaGAGGTCCTTCCTAAGACAG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHAPDLH*RSFLRQ
Trigger: CTGTCTTAGGAAGGACCTTCAGTGCAGATCAGGTGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACAGAGGAGCATTCAAATaGGGGGACGTTTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHRGAFK*GDVSTQ
Trigger: CTGGGTGGAAACGTCCCCTCATTTGAATGCTCCTCT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGTGGCACTCGAATCTaGTGCAGGACACGATTCAGA +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGGTRI*CRTRFR
Trigger: TCTGAATCGTGTCCTGCAGCAGATTCGAGTGCCACC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTTGCCCCGCCTACTATaGAAGCTTGTCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLPRLL*KLVPLF
Trigger: GAAGAGAGGGACAAGCTTGCATAGTAGGCGGGGCAA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGGTACTGGAGGCCACTaGACTGGATGTTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVGTGGH*TGCLGK
Trigger: CTTGCCCAAACATCCAGTGCAGTGGCCTCCAGTACC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACAGAGTCTGTGTGGATaGTGCCATCGGTACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVQSLCG*CHRYWR
Trigger: CCTCCAGTACCGATGGCAGCATCCACACAGACTCTG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACAATGGCAGCCTTTGTaGGCTGAGGGTCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVQWQPL*AEGLVF
Trigger: GAACACCAGACCCTCAGCGCACAAAGGCTGCCATTG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGCCTGCTGTTTGTCTaGACTGTTGGCAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSLLFV*TVGKLQ
Trigger: TTGAAGCTTGCCAACAGTGCAGACAAACAGCAGGCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCGGGGGATCCCATTCTaGTCTACCTCTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYRGIPF*STSLSF
Trigger: GAAGCTCAGAGAGGTAGAGCAGAATGGGATCCCCCG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGCCACAATTTAGATTaGCCTTCGGTGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSHNLD*PSVCSR
Trigger: TCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCCTGAGAAATCCAGCTTaGCAAAGCAAAAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSILRNPA*QSKRRL
Trigger: CAGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAG...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTGCTGCTGAGAATCTaGAGCGACCAGACAGAACAT +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVLLRI*SDQTEH
Trigger: ATGTTCTGTCTGGTCGCTGCAGATTCTCAGCAGCAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGCCAATCCTCCGCAGTaGCCACCTCAGCCTATGTAT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYANPPQ*PPQPMY
Trigger: ATACATAGGCTGAGGTGGGCACTGCGGAGGATTGGC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCCACAGAGTCTGTGTaGATGCTGCCATCGGTACTG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSTESV*MLPSVL
Trigger: CAGTACCGATGGCAGCATCCACACAGACTCTGTGGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTGTTTGTTTTGGAGCTaGATGCTCCTACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSICLFWS*MLLQRC
Trigger: GCATCGCTGTAGGAGCATCCAGCTCCAAAACAAACA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACAGCATGGGACTATTTaGCTGGAGGCAGGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVQHGTI*LEAGGF
Trigger: AAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGTCCCAATATTTGTCTTaGCATCAGACTTTTACTCCA +
Preference number: 4 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKSQYLS*HQTFTP
Trigger: TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGA...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAATACGCTCATTATTTaGACATGGCTAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPNTLII*TWLVRK
Trigger: CTTCCTCACTAGCCATGTCCAAATAATGAGCGTATT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAAGGCAGCTCCTCATTaGAACTCTCTCAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNKAAPH*NSLRTQ
Trigger: CTGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCCAGTAGCGGTGGGGTaGACAGAAGAACCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYPVAVG*TEEPPY
Trigger: GTAAGGAGGTTCTTCTGTCCACCCCACCGCTACTGG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACATCTTCTGCTGCAGGTaGGCAATGGCAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYIFCCR*AMAAFV
Trigger: CACAAAGGCTGCCATTGCTCACCTGCAGCAGAAGAT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTTTGTTCCGAATGAGTaGGGCAATCTCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIFVPNE*GNLSGL
Trigger: AAGCCCAGAGAGATTGCCTCACTCATTCGGAACAAA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCAAATTTGTTCCGAATaGGTGAGGCAATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNQICSE*VRQSLW
Trigger: CCAGAGAGATTGCCTCACTCATTCGGAACAAATTTG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCAAGGAATAAAGTGCTaGACGTCCTGTTGCGAGTCT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIQGIKC*TSCCES
Trigger: AGACTCGCAACAGGACGTTCAGCACTTTATTCCTTG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGCATCATCTAGGGGATaGAAAGAACCGTTCCACATA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNASSRG*KEPFHI
Trigger: TATGTGGAACGGTTCTTTTCATCCCCTAGATGATGC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACAGTGGCCAACTTGGGTaGGAAAGCCAGAGAGATCCA +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSGQLG*ESQRDP
Trigger: TGGATCTCTCTGGCTTTCTCACCCAAGTTGGCCACT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAATGCTGGGGCCAAAATaGAGACAGAAGACTCCACAT +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAMLGPK*RQKTPH
Trigger: ATGTGGAGTCTTCTGTCTTCATTTTGGCCCCAGCAT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTACAACATGCTGGCTCTaGGAAATCCAGCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNITTCWL*EIQLAK
Trigger: TTTGGCAAGCTGGATTTCTCAGAGCCAGCATGTTGT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCAGTGAAGACCACATaGAAATACGCTCATTATTTG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNAVKTT*KYAHYL
Trigger: CAAATAATGAGCGTATTTTCATGTGGTCTTCACTGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTGTCAGGCAGTCTGCTaGTTTTGCTTGCCACAAAGC +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHCQAVC*FCLPQS
Trigger: GCTTTGTGGCAAGCAAAATCAGCAGACTGCCTGACA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTATGTTTGGGCAAGGCTaGTTACTTCCAACCGTTCGA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIMFGQG*LLPTVR
Trigger: TCGAACGGTTGGAAGTAAGCAGCCTTGCCCAAACAT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTTGATGCGGGCAGCCTaGTGTTTGTCTGCACTGTTG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYLMRAA*CLSALL
Trigger: CAACAGTGCAGACAAACAGCAGGCTGCCCGCATCAA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTTGGGGATGTTGTCTaGACTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVGDVV*TAKFVP
Trigger: CGGAACAAATTTGGCAGTGCAGACAACATCCCCAAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTAGCCACAATTTAGATTaGCCTTCGGTGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISHNLD*PSVCSR
Trigger: TCTGGAGCACACCGAAGGGCAATCTAAATTGTGGCT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTACTGTAGTAGGACTGTaGAGTGATCCTTTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNITVVGL*SDPLGD
Trigger: ATCCCCCAAAGGATCACTGCACAGTCCTACTACAGT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACAGCTACCACTGGGAATaGTTTCCCCCACCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSYHWE*FPPPKS
Trigger: GCTCTTTGGTGGGGGAAAGCATTCCCAGTGGTAGCT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTACAACATATCTATACTaGCCAGTGGCAACGGACTGC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNITTYLY*PVATDC
Trigger: GCAGTCCGTTGCCACTGGGCAGTATAGATATGTTGT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTCTCTTCATCTTGGGTaGCACTCGAATCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHSLHLG*HSNLLQ
Trigger: CTGCAGCAGATTCGAGTGCCACCCAAGATGAAGAGA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTGTGCAGTGATCCTTTaGGGGATGATGCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSICAVIL*GMMLSL
Trigger: AAGTGAAAGCATCATCCCCCAAAGGATCACTGCACA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGAATTTCCTGGTAAGTaGAAACAGGCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNEFPGK*KQAKHT
Trigger: AGTATGCTTTGCCTGTTTCCACTTACCAGGAAATTC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTCATTATTTGGACATaGCTAGTGAGGAAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALIIWT*LVRKAR
Trigger: GCGAGCCTTCCTCACTAGCCATGTCCAAATAATGAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACAATACGCTCATTATTTaGACATGGCTAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNNTLII*TWLVRK
Trigger: CTTCCTCACTAGCCATGTCCAAATAATGAGCGTATT...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAAGGCAGCTCCTCATTaGAACTCTCTCAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAKAAPH*NSLRTQ
Trigger: CTGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCTTCTAGTGGATCCCTaGGCTTCTCACCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHLLVDP*ASHLHS
Trigger: ACTGTGAAGGTGAGAAGCCCAGGGATCCACTAGAAG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
3UTR CAA 72 bp TTGTTACTCTTTTCAGGGCATCTTATATGCACTTGGTaGCACAGAATGAGGCTAAGAGGGAACAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: LLLFSGHLICTW*HRMRLRGNSIC
Trigger: ACAAATGCTGTTCCCTCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAGATGCCCTGAAAAGAGTAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp TACTTTGTTACTCTTTTCAGGGCATCTTATATGCACTaGGTTGCACAGAATGAGGCTAAGAGGGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: YFVTLFRASYMH*VAQNEAKREQH
Trigger: ATGCTGTTCCCTCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAGATGCCCTGAAAAGAGTAACAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGACCAGACTTCCTGTTaGTTTGGGGACTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVDQTSC*FGDFPL
Trigger: CAAAGGGAAGTCCCCAAATCAACAGGAAGTCTGGTC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTGGAAAACCCACCTTTaGCACTATCCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHWKTHL*HYPPHL
Trigger: AAGGTGTGGTGGATAGTGTCAAAGGTGGGTTTTCCA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGCATCATCTAGGGGATaGAAAGAACCGTTCCACATA +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAASSRG*KEPFHI
Trigger: TATGTGGAACGGTTCTTTTCATCCCCTAGATGATGC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTGGGTCCTGCTAACCTaGCATTTCCTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYWVLLT*HFLHCS
Trigger: AGAGCAGTGAAGGAAATGTCAGGTTAGCAGGACCCA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNIHLSK*LPVPTK
Trigger: TTTTGTGGGCACTGGAAGTCACTTTGATAGATGGAT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGGACTATTCAGGATTTaGACAAGCATGCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNGLFRI*TSMLFQ
Trigger: TTGGAAGAGCATGCTTGTTCAAATCCTGAATAGTCC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAGAGGGCGTCCCAGTaGTTCCAGAGAAAGGCAATA +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVKRASQ*FQRKAI
Trigger: TATTGCCTTTCTCTGGAAGCACTGGGACGCCCTCTT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAGAGGGAGTTTAAACTaGATCTCAAAACAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIRGSLN*ISKQRR
Trigger: CCGCCTTTGTTTTGAGATGCAGTTTAAACTCCCTCT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCTCTTCATCTTGGGTaGCACTCGAATCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSLHLG*HSNLLQ
Trigger: CTGCAGCAGATTCGAGTGCCACCCAAGATGAAGAGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTGTTTGTTTTGGAGCTaGATGCTCCTACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHCLFWS*MLLQRC
Trigger: GCATCGCTGTAGGAGCATCCAGCTCCAAAACAAACA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTGTGCAGTGATCCTTTaGGGGATGATGCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNICAVIL*GMMLSL
Trigger: AAGTGAAAGCATCATCCCCCAAAGGATCACTGCACA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTACTACACTGGTTTTTaGAAACAGCCTCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIYYTGF*KQPPAL
Trigger: GAGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACCTATCCTACTACACTaGTTTTTGGAAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAPILLH*FLETAS
Trigger: GGAGGCTGTTTCCAAAAACCAGTGTAGTAGGATAGG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGTTCATAGTGTCCTTTaGCACTCCTGCCTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNVHSVL*HSCLKS
Trigger: ACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAAC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACCCCAGGCTAGAGGCATaGACAAATAAACCAGGAATG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHPRLEA*TNKPGM
Trigger: CATTCCTGGTTTATTTGTCCATGCCTCTAGCCTGGG...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTGGAAAACCCACCTTTaGCACTATCCACCACACCTT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYWKTHL*HYPPHL
Trigger: AAGGTGTGGTGGATAGTGTCAAAGGTGGGTTTTCCA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTATCCATCTATCAAAGTaGCTTCCAGTGCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIIHLSK*LPVPTK
Trigger: TTTTGTGGGCACTGGAAGTCACTTTGATAGATGGAT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGGGCTTTCTACAGGTaGAAACCTTCCTTTGATAGA +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGAFYR*KPSFDR
Trigger: TCTATCAAAGGAAGGTTTTCACCTGTAGAAAGCCCC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGGTACAGCAAAGAATaGAAACAGATGCATGGTTAC +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNRYSKE*KQMHGY
Trigger: GTAACCATGCATCTGTTTTCATTCTTTGCTGTACCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGTTATAGAAGAGCTCTaGCAAGACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIVIEEL*QDKRTQ
Trigger: TTGGGTTCTTTTGTCTTGTCAGAGCTCTTCTATAAC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCTTACTAGGACATACTaGGTATACCAAGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLTRTY*VYQGME
Trigger: TTCCATTCCTTGGTATACTCAGTATGTCCTAGTAAG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGCAGTGAAGACCACATaGAAATACGCTCATTATTTG +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIAVKTT*KYAHYL
Trigger: CAAATAATGAGCGTATTTTCATGTGGTCTTCACTGC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGTTGGGGATGTTGTCTaGACTGCCAAATTTGTTCCG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVVGDVV*TAKFVP
Trigger: CGGAACAAATTTGGCAGTGCAGACAACATCCCCAAC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTCAGGGCATCTTATATaGACTTGGTTGCACAGAATG +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISGHLI*TWLHRM
Trigger: CATTCTGTGCAACCAAGTGCATATAAGATGCCCTGA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCATCTTATATGCACTTaGTTGCACAGAATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNHLICT*LHRMRL
Trigger: TAGCCTCATTCTGTGCAACCAAGTGCATATAAGATG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGAATTTCCTGGTAAGTaGAAACAGGCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNEFPGK*KQAKHT
Trigger: AGTATGCTTTGCCTGTTTCCACTTACCAGGAAATTC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGTTCATAGTGTCCTTTaGCACTCCTGCCTAAAAAGT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIVHSVL*HSCLKS
Trigger: ACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAAC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCGAGTATACCAAGGAATaGAAATTGGAGCAGACAGAA +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIEYTKE*KLEQTE
Trigger: TTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTC...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAGGAGCCAGTAGAGTaGAAAGCCTTCCTTACTAGG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVKEPVE*KAFLTR
Trigger: CCTAGTAAGGAAGGCTTTCCACTCTACTGGCTCCTT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCTCATTATTTGGACATaGCTAGTGAGGAAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYLIIWT*LVRKAR
Trigger: GCGAGCCTTCCTCACTAGCCATGTCCAAATAATGAG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGTTTCATTTGGGGTTaGGGTGTGGGAACCATAATT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGFIWG*GVGTII
Trigger: AATTATGGTTCCCACACCCCAACCCCAAATGAAACC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTGCCTAGGAATGTGTaGACTATTCAGGATTTGAAC +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALPRNV*TIQDLN
Trigger: GTTCAAATCCTGAATAGTCCACACATTCCTAGGCAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACAAATTTGTTCCGAATaGGTGAGGCAATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVQICSE*VRQSLW
Trigger: CCAGAGAGATTGCCTCACTCATTCGGAACAAATTTG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTATTTTGGGCTAGACTaGAAGTTTGAAATCACTCCC +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIYFGLD*KFEITP
Trigger: GGGAGTGATTTCAAACTTTCAGTCTAGCCCAAAATA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAACAGTCTCAGAGAAGTaGCTTTCACAAAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVTVSEK*LSQNRQ
Trigger: CTGCCTGTTTTGTGAAAGTCACTTCTCTGAGACTGT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCAAATCCTGAGCTCTaGATGTCCAGGGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSNPEL*MSRVFV
Trigger: AACAAACACCCTGGACATGCAGAGCTCAGGATTTGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATCAAATCCTGAGCTCTaGATGTCCAGGGTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVSNPEL*MSRVFV
Trigger: AACAAACACCCTGGACATGCAGAGCTCAGGATTTGA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGTCCTTTGGCACTCCTaGCTAAAAAGTCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYVLWHS*LKSHCN
Trigger: ATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGAC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGTGTTAGGTTTAACTaGTTTGCCCTCATCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGVRFN*FALIRF
Trigger: AAACCTGATGAGGGCAAACCAGTTAAACCTAACACC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCCCAAAAATTCAGACATaGAATGTGGTAGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIPKIQT*NVVGFH
Trigger: GTGAAATCCTACCACATTCCATGTCTGAATTTTTGG...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCCTATCCTACTACACTaGTTTTTGGAAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYPILLH*FLETAS
Trigger: GGAGGCTGTTTCCAAAAACCAGTGTAGTAGGATAGG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTACATTATAGGAAGCTaGCAACATTTCACACCCAAA +
Preference number: 4 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIYIIGS*QHFTPK
Trigger: TTTGGGTGTGAAATGTTGCCAGCTTCCTATAATGTA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGAATTTCCTGGTAAGTaGAAACAGGCAAAGCATACT +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAEFPGK*KQAKHT
Trigger: AGTATGCTTTGCCTGTTTCCACTTACCAGGAAATTC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGAGTATACCAAGGAATaGAAATTGGAGCAGACAGAA +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIEYTKE*KLEQTE
Trigger: TTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACAGAGCTTTCTATATCTaGGAGCCTAGGAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYRAFYI*EPRRTL
Trigger: CAGAGTTCTCCTAGGCTCCCAGATATAGAAAGCTCT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR TCA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGAAGCACTGAGAGTTTaGGTATTACATTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIEALRV*VLHSSS
Trigger: ACTTGAAGAATGTAATACTCAAACTCTCAGTGCTTC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGAAGCACTGAGAGTTTaGGTATTACATTCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAEALRV*VLHSSS
Trigger: ACTTGAAGAATGTAATACTCAAACTCTCAGTGCTTC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGCAGTGAAGACCACATaGAAATACGCTCATTATTTG +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHAVKTT*KYAHYL
Trigger: CAAATAATGAGCGTATTTTCATGTGGTCTTCACTGC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACTCAGCATTTTCATCTaGCTGTACCTCAAAGGAACA +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVLSIFI*LYLKGT
Trigger: TGTTCCTTTGAGGTACAGTCAGATGAAAATGCTGAG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACAGGAGAACTCTGTGCTaGATAAACAGAAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYRRTLC*INRKLL
Trigger: CAGAAGCTTTCTGTTTATTCAGCACAGAGTTCTCCT...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAGAGGGAGTTTAAACTaGATCTCAAAACAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVRGSLN*ISKQRR
Trigger: CCGCCTTTGTTTTGAGATGCAGTTTAAACTCCCTCT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATCAGGGCATCTTATATaGACTTGGTTGCACAGAATG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVSGHLI*TWLHRM
Trigger: CATTCTGTGCAACCAAGTGCATATAAGATGCCCTGA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR GCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCTGCTGATTTTGCTTaGCACAAAGCTCATCCTTCA +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSADFA*HKAHPS
Trigger: TGAAGGATGAGCTTTGTGGCAAGCAAAATCAGCAGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCAAAAGTAACAGGATaGGCAGCAAAAGGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSKVTG*AAKGTA
Trigger: TGCTGTACCTTTTGCTGCCCATCCTGTTACTTTTGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGTTATAGAAGAGCTCTaGCAAGACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVVIEEL*QDKRTQ
Trigger: TTGGGTTCTTTTGTCTTGTCAGAGCTCTTCTATAAC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGTTATAGAAGAGCTCTaGCAAGACAAAAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYVIEEL*QDKRTQ
Trigger: TTGGGTTCTTTTGTCTTGTCAGAGCTCTTCTATAAC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR TCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACTTACTAGGACATACTaGGTATACCAAGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVLTRTY*VYQGME
Trigger: TTCCATTCCTTGGTATACTCAGTATGTCCTAGTAAG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTGTGCTCCAGATTGTTaGTTCATATTAAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SLSTISSLRSINYSVNVHCAPDC*FILKDC
Trigger: ACAGTCCTTTAATATGAACCAACAATCTGGAGCACA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACATCTTATATGCACTTaGTTGCACAGAATGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVHLICT*LHRMRL
Trigger: TAGCCTCATTCTGTGCAACCAAGTGCATATAAGATG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAATACGCTCATTATTTaGACATGGCTAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVNTLII*TWLVRK
Trigger: CTTCCTCACTAGCCATGTCCAAATAATGAGCGTATT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTGTGCTCCAGATTGTTaGTTCATATTAAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYCAPDC*FILKDC
Trigger: ACAGTCCTTTAATATGAACCAACAATCTGGAGCACA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTACCAAAAATTCAGACATaGAATGTGGTAGGATTTCAC +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVPKIQT*NVVGFH
Trigger: GTGAAATCCTACCACATTCCATGTCTGAATTTTTGG...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CCA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATACATTATAGGAAGCTaGCAACATTTCACACCCAAA +
Preference number: 4 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVYIIGS*QHFTPK
Trigger: TTTGGGTGTGAAATGTTGCCAGCTTCCTATAATGTA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
3UTR CAA 72 bp TTACTAGGACATACTGAGTATACCAAGGAATGGAAATaGGAGCAGACAGAAGTACCCTTCAATTATCATAAA +
Preference number: 4 (lower is better)
Translates to: LLGHTEYTKEWK*EQTEVPFNYHK
Trigger: TTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCTTGGTATACTCAGTATGTCCTAGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393238.7
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS GCA 90 bp AGCAGCCGGCGTCTCCGCCAGCGCCGTCGCTCGAGCTCAAGCGCCTaGTCCTTCCACTGCGGCCGCCGCACCCGGTCCATCCCCCACAAC +
Preference number: 5 (lower is better)
Translates to: SSRRLRQRRRSSSSA*SFHCGRRTRSIPHN
Trigger: GTTGTGGGGGATGGACCGGGTGCGGCGGCCGCAGTGGAAGGAGCAGGCGCTTGAGCTCGAGCGACGGCGCTGGCGGAGACGCCGGCTGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393238.8
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGAGCAATGGCAGCCTTaGTGCGCTGAGGGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSEQWQP*CAEGLV
Trigger: CACCAGACCCTCAGCGCACAAAGGCTGCCATTGCTC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCGGGCAGCCTGCTGTTaGTCTGCACTGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSRAACC*SALLAS
Trigger: GCTTGCCAACAGTGCAGACAAACAGCAGGCTGCCCG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCGGGCAGCCTGCTGTTaGTCTGCACTGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKRAACC*SALLAS
Trigger: GCTTGCCAACAGTGCAGACAAACAGCAGGCTGCCCG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAGGATGTTGATGAGTTaGCCCAGAAGGTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: CSSSTRMMELVMRRGKAARMLMS*PRRFRA
Trigger: TGCCCGGAACCTTCTGGGCAAACTCATCAACATCCT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGTGCTGAACGTCCTGTaGCGAGTCTTCATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSVLNVL*RVFMRG
Trigger: CCCCCTCATGAAGACTCGCAACAGGACGTTCAGCAC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS GCA 90 bp GTTTCCGAGAATAACGCTGCAAATGAGGACAGCTACCACTGGGAATaGTTTCCCCCACCAAAGAGCCGCAGTGAAGCTTCTAGTGGATCC +
Preference number: 5 (lower is better)
Translates to: VSENNAANEDSYHWE*FPPPKSRSEASSGS
Trigger: GGATCCACTAGAAGCTTCACTGCGGCTCTTTGGTGGGGGAAAGCATTCCCAGTGGTAGCTGTCCTCATTTGCAGCGTTATTCTCGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAAGTATTCAGCAACGTaGTCGTCCCGGGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAKYSAT*SSRAVC
Trigger: ACAAACAGCCCGGGACGACAACGTTGCTGAATACTT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAGGGGGACCACACAGTaGGCTACAGTGGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSRGTTQ*ATVETK
Trigger: CTTTGTCTCCACTGTAGCCAACTGTGTGGTCCCCCT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAAGCCACAATTTAGATaGCCCTTCGGTGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAKPQFR*PFGVLQ
Trigger: CTGGAGCACACCGAAGGGCAATCTAAATTGTGGCTT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS GCA 90 bp CCAGCTTCCAAACTGCAGAGGAGCTGTGGCATAGTCTGTCACTGCTaGACATACTTGGTTTCCGAGAATAACGCTGCAAATGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: PASKLQRSCGIVCHC*TYLVSENNAANEDS
Trigger: GCTGTCCTCATTTGCAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGTTTGGAAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCGGGCAGCCTGCTGTTaGTCTGCACTGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNRAACC*SALLAS
Trigger: GCTTGCCAACAGTGCAGACAAACAGCAGGCTGCCCG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTAAAGGCAGCTCCTCATaGGAACTCTCTCAGAACTCA +
Preference number: 5 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAKGSSS*ELSQNS
Trigger: TGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTTT...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS GCA 90 bp GTTCCAGCTTCCAAACTGCAGAGGAGCTGTGGCATAGTCTGTCACTaGTGCACATACTTGGTTTCCGAGAATAACGCTGCAAATGAGGAC +
Preference number: 5 (lower is better)
Translates to: VPASKLQRSCGIVCH*CTYLVSENNAANED
Trigger: GTCCTCATTTGCAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGTTTGGAAGCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CCA 90 bp TACTTGGTTTCCGAGAATAACGCTGCAAATGAGGACAGCTACCACTaGGAATGCTTTCCCCCACCAAAGAGCCGCAGTGAAGCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: YLVSENNAANEDSYH*ECFPPPKSRSEASS
Trigger: ACTAGAAGCTTCACTGCGGCTCTTTGGTGGGGGAAAGCATTCCCAGTGGTAGCTGTCCTCATTTGCAGCGTTATTCTCGGAAACCAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAAGTATTCAGCAACGTaGTCGTCCCGGGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSKYSAT*SSRAVC
Trigger: ACAAACAGCCCGGGACGACAACGTTGCTGAATACTT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCAGCTGTGCTCAAGTTTCTTTaGCAGCTGGAGGATAGTTTG +
Preference number: 5 (lower is better)
Translates to: CSSSTRMMELVMRRGKAAVLKFL*QLEDSL
Trigger: CAAACTATCCTCCAGCTGCAAAAGAAACTTGAGCAC...AGCTGCCTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGTCGTCCCGGGCTGTTaGTGCAATCTTGATTTGTTC +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKVVPGC*CNLDLF
Trigger: GAACAAATCAAGATTGCACAAACAGCCCGGGACGAC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCTGGAAAACCCACCTTaGACACTATCCACCACACCT +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKLENPP*TLSTTP
Trigger: AGGTGTGGTGGATAGTGTCAAAGGTGGGTTTTCCAG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAGGATGTTGATGAGTTaGCCCAGAAGGTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPRMLMS*PRRFRA
Trigger: TGCCCGGAACCTTCTGGGCAAACTCATCAACATCCT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAAAGGCAGCTCCTCATaGGAACTCTCTCAGAACTCA +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSKGSSS*ELSQNS
Trigger: TGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTTT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCACTGCTGCACATACTaGGTTTCCGAGAATAACGCT +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSHCCTY*VSENNA
Trigger: AGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTAAGCTCATCCTTCATTaGTGCACTGCCAGAGAAAGC +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSKLILH*CTARES
Trigger: GCTTTCTCTGGCAGTGCACAAATGAAGGATGAGCTT...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGAGCAATGGCAGCCTTaGTGCGCTGAGGGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIEQWQP*CAEGLV
Trigger: CACCAGACCCTCAGCGCACAAAGGCTGCCATTGCTC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGTGCTCAAGTTTCTTTaGCAGCTGGAGGATAGTTTG +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSVLKFL*QLEDSL
Trigger: CAAACTATCCTCCAGCTGCAAAAGAAACTTGAGCAC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAAAGCCACAATTTAGATaGCCCTTCGGTGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPKPQFR*PFGVLQ
Trigger: CTGGAGCACACCGAAGGGCAATCTAAATTGTGGCTT...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGGCAGTCTGCTGATTTaGCTTGCCACAAAGCTCATC +
Preference number: 5 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPGSLLI*LATKLI
Trigger: GATGAGCTTTGTGGCAAGCAAAATCAGCAGACTGCC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACTTTGGGGCCTCTGGCTaGCCCCGCCTACTATGCAAG +
Preference number: 5 (lower is better)
Translates to: SLSTISSLRSINYSVNVHFGASG*PRLLCK
Trigger: CTTGCATAGTAGGCGGGGCAAGCCAGAGGCCCCAAA...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426664.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGAGCAATGGCAGCCTTaGTGCGCTGAGGGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: SLSTISSLRSINYSVNVHEQWQP*CAEGLV
Trigger: CACCAGACCCTCAGCGCACAAAGGCTGCCATTGCTC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCATCTGCACTGCCAAATTaGTTCCGAATGAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPSALPN*FRMSEA
Trigger: TGCCTCACTCATTCGGAACAAATTTGGCAGTGCAGA...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATGCTGCAGCTCCATCTaGGAGATGCGCGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRACCSSI*EMRVWH
Trigger: ATGCCAGACGCGCATCTCCAAGATGGAGCTGCAGCA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGGGGGACCACACAGTaGGCTACAGTGGAGACAAAG +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNRGTTQ*ATVETK
Trigger: CTTTGTCTCCACTGTAGCCAACTGTGTGGTCCCCCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGTGCTGAACGTCCTGTaGCGAGTCTTCATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAVLNVL*RVFMRG
Trigger: CCCCCTCATGAAGACTCGCAACAGGACGTTCAGCAC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTTCGGTGTGCTCCAGATaGTTGGTTCATATTAAAGGA +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSSVCSR*LVHIKG
Trigger: TCCTTTAATATGAACCAACAATCTGGAGCACACCGA...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTCTCCACATCATCACTTaGGTTGTAATTAGGGGTGTT +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSLHIIT*VVIRGV
Trigger: AACACCCCTAATTACAACCAAAGTGATGATGTGGAG...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGAGAATCACCTTTGGTaGATTCTCTTAGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKENHLW*ILLGRQ
Trigger: CTGTCTGCCTAAGAGAATCAACCAAAGGTGATTCTC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGCGCGCGCACGCAGTTaGCTAGAGCAGCTAATGCAA +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAARARS*LEQLMQ
Trigger: TTGCATTAGCTGCTCTAGCAAACTGCGTGCGCGCGC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS TCA 90 bp ACTCTTAGAGCTTTCTATATCTGGGAGCCTAGGAGAACTCTGTGCTaGATAAACAGAAAGCTTCTGCCAAACAAGCATCCGTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: TLRAFYIWEPRRTLC*INRKLLPNKHPCVC
Trigger: GCACACACACGGATGCTTGTTTGGCAGAAGCTTTCTGTTTATTCAGCACAGAGTTCTCCTAGGCTCCCAGATATAGAAAGCTCTAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGGCTGTTTGTGCAATCTaGATTTGTTCTGTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKAVCAI*ICSVSF
Trigger: GAAGCTCACAGAACAAATCAAGATTGCACAAACAGC...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCAATCTCTCTGGGCTTaGAGACTACAGCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIQSLWA*RLQRLL
Trigger: CAGCAGGCGCTGTAGTCTCAAAGCCCAGAGAGATTG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATACAGCCAGGAGGATGTaGATGAGTTTGCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNTARRM*MSLPRR
Trigger: CCTTCTGGGCAAACTCATCAACATCCTCCTGGCTGT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AAGGAAGATAGAAAGTCAGCATGGGACTATTTGGCTGGAGGCAGGGGGCTTTCTGGAAGCACTGAGAGTTaGAGTATTACATTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KEDRKSAWDYLAGGRGLSGSTES*SITFFK
Trigger: CTTGAAGAATGTAATACTCAAACTCTCAGTGCTTCC...AGAAAGCCCCCTGCCTCCAGCCAAATAGTCCCATGCTGACTTTCTATCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCAGAGAATCACCTTTGGTaGATTCTCTTAGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPENHLW*ILLGRQ
Trigger: CTGTCTGCCTAAGAGAATCAACCAAAGGTGATTCTC...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGCAGGCAAAGCATACTTaGTTACTCTTTTCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKQAKHT*LLFSGH
Trigger: ATGCCCTGAAAAGAGTAACAAAGTATGCTTTGCCTG...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTCTGAGAAATCCAGCTaGCCAAAGCAAAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNSEKSS*PKQKEA
Trigger: AGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAGA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTAAATGTTCAAGTTCCACCAGGATGATGGAACTGGTTATGCGACGGGGGAAGATAAGCTCTTTCCATTaGTTCCAGCTTCCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SKCSSSTRMMELVMRRGKISSFH*FQLPNC
Trigger: GCAGTTTGGAAGCTGGAACAAATGGAAAGAGCTTAT...CTTCCCCCGTCGCATAACCAGTTCCATCATCCTGGTGGAACTTGAACATTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS TCA 90 bp CCAGTGGCAACGGACTGCCTAGGAATGTGTGGACTATTCAGGATTTaGACAAGCATGCTCTTCCAACCATCTTTGTTTTCACATGAAGTA +
Preference number: 5 (lower is better)
Translates to: PVATDCLGMCGLFRI*TSMLFQPSLFSHEV
Trigger: TACTTCATGTGAAAACAAAGATGGTTGGAAGAGCATGCTTGTTCAAATCCTGAATAGTCCACACATTCCTAGGCAGTCCGTTGCCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509440.5
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATGCTGCAGCTCCATCTaGGAGATGCGCGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVCCSSI*EMRVWH
Trigger: ATGCCAGACGCGCATCTCCAAGATGGAGCTGCAGCA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTACAGCCAGGAGGATGTaGATGAGTTTGCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNITARRM*MSLPRR
Trigger: CCTTCTGGGCAAACTCATCAACATCCTCCTGGCTGT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAACAGCCAGGAGGATGTaGATGAGTTTGCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRATARRM*MSLPRR
Trigger: CCTTCTGGGCAAACTCATCAACATCCTCCTGGCTGT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGTGCTGAACGTCCTGTaGCGAGTCTTCATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVVLNVL*RVFMRG
Trigger: CCCCCTCATGAAGACTCGCAACAGGACGTTCAGCAC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAAGCCACAATTTAGATaGCCCTTCGGTGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNKPQFR*PFGVLQ
Trigger: CTGGAGCACACCGAAGGGCAATCTAAATTGTGGCTT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGAGAATCACCTTTGGTaGATTCTCTTAGGCAGACAG +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNENHLW*ILLGRQ
Trigger: CTGTCTGCCTAAGAGAATCAACCAAAGGTGATTCTC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGCATCTTATATGCACTaGGTTGCACAGAATGAGGCT +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNASYMH*VAQNEA
Trigger: AGCCTCATTCTGTGCAACCAAGTGCATATAAGATGC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CTAGTGAGGAAGGCTCGCTCCCAATATTTGTCTTGGCATCAGACTTTTACTCCACTCCCAATATTTGTCTaGGCATCAGACTTTTACTCC +
Preference number: 5 (lower is better)
Translates to: LVRKARSQYLSWHQTFTPLPIFV*ASDFYS
Trigger: GGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAG...TGGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGCCTTCCTCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTAAGTATTCAGCAACGTaGTCGTCCCGGGCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIKYSAT*SSRAVC
Trigger: ACAAACAGCCCGGGACGACAACGTTGCTGAATACTT...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCACTGGAAAACCCACCTTaGACACTATCCACCACACCT +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALENPP*TLSTTP
Trigger: AGGTGTGGTGGATAGTGTCAAAGGTGGGTTTTCCAG...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCAATCTCTCTGGGCTTaGAGACTACAGCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYQSLWA*RLQRLL
Trigger: CAGCAGGCGCTGTAGTCTCAAAGCCCAGAGAGATTG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATTCTGCACTGCCAAATTaGTTCCGAATGAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNSALPN*FRMSEA
Trigger: TGCCTCACTCATTCGGAACAAATTTGGCAGTGCAGA...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACAGGATGTTGATGAGTTaGCCCAGAAGGTTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: SLSTISSLRSINYSVNVHRMLMS*PRRFRA
Trigger: TGCCCGGAACCTTCTGGGCAAACTCATCAACATCCT...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCTGTGCAGTGATCCTTaGGGGGATGATGCTTTCACT +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILCSDP*GDDAFT
Trigger: AGTGAAAGCATCATCCCCCAAAGGATCACTGCACAG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACTTAGGAGAATCACCTTaGGTTGATTCTCTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNLGESP*VDSLRQ
Trigger: CTGCCTAAGAGAATCAACCAAAGGTGATTCTCCTAA...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCTTATATGCACTTGGTaGCACAGAATGAGGCTAAGA +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNLICTW*HRMRLR
Trigger: TCTTAGCCTCATTCTGTGCAACCAAGTGCATATAAG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTCTGAGAAATCCAGCTaGCCAAAGCAAAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LIDRNRPRANRNSFNPSISEKSS*PKQKEA
Trigger: AGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAGA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACCTCCCAATATTTGTCTaGGCATCAGACTTTTACTCC +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNLPIFV*ASDFYS
Trigger: GGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAG...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCAAAGGCAGCTCCTCATaGGAACTCTCTCAGAACTCA +
Preference number: 5 (lower is better)
Translates to: LIDRNRPRANRNSFNPSIKGSSS*ELSQNS
Trigger: TGAGTTCTGAGAGAGTTCCAATGAGGAGCTGCCTTT...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGCTGAGGAGGGTGGATaGCTTGGTTCTAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVAEEGG*LGSRSS
Trigger: CGAACTCCTAGAACCAAGCAATCCACCCTCCTCAGC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTCTGCACTGCCAAATTaGTTCCGAATGAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISALPN*FRMSEA
Trigger: TGCCTCACTCATTCGGAACAAATTTGGCAGTGCAGA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGCTCGCTCCCAATATTaGTCTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNARSQY*SWHQTF
Trigger: AAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCAAAACAAAGGCGGCAGAGGGCAGCATTTACAGCAAGACTTTCTTACTCAAACGTGGGAACCATAATTTaGCCTGTGTCAGATTACAAT +
Preference number: 5 (lower is better)
Translates to: SKQRRQRAAFTARLSYSNVGTII*PVSDYN
Trigger: ATTGTAATCTGACACAGGCAAAATTATGGTTCCCAC...GTTTGAGTAAGAAAGTCTTGCTGTAAATGCTGCCCTCTGCCGCCTTTGTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGTCGTCCCGGGCTGTTaGTGCAATCTTGATTTGTTC +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVVVPGC*CNLDLF
Trigger: GAACAAATCAAGATTGCACAAACAGCCCGGGACGAC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTTAGGTTTAACTGGTTaGCCCTCATCAGGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILGLTG*PSSGFR
Trigger: GCGAAAACCTGATGAGGGCAAACCAGTTAAACCTAA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATTAGGTTTAACTGGTTaGCCCTCATCAGGTTTTCGC +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALGLTG*PSSGFR
Trigger: GCGAAAACCTGATGAGGGCAAACCAGTTAAACCTAA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TTGATAGATAGAAACCGTCCCAGGGCAAATAGGAACAGTTTCAATCCATCTATCTTAGGAGAATCACCTTaGGTTGATTCTCTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: LIDRNRPRANRNSFNPSILGESP*VDSLRQ
Trigger: CTGCCTAAGAGAATCAACCAAAGGTGATTCTCCTAA...GATAGATGGATTGAAACTGTTCCTATTTGCCCTGGGACGGTTTCTATCTATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCAGGCAAAGCATACTTaGTTACTCTTTTCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNQAKHT*LLFSGH
Trigger: ATGCCCTGAAAAGAGTAACAAAGTATGCTTTGCCTG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAGGTGAAAACCTTCCTTaGATAGATAGAAACCGTCCC +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAGENLP*IDRNRP
Trigger: GGGACGGTTTCTATCTATCAAAGGAAGGTTTTCACC...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATCTCCCAATATTTGTCTaGGCATCAGACTTTTACTCC +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNLPIFV*ASDFYS
Trigger: GGAGTAAAAGTCTGATGCCAAGACAAATATTGGGAG...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTGCTCGCTCCCAATATTaGTCTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNIARSQY*SWHQTF
Trigger: AAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGC...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTTCGGTGTGCTCCAGATaGTTGGTTCATATTAAAGGA +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNISVCSR*LVHIKG
Trigger: TCCTTTAATATGAACCAACAATCTGGAGCACACCGA...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCTACTACACTGGTTTTaGGAAACAGCCTCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYLLHWF*ETASCS
Trigger: AGAGCAGGAGGCTGTTTCCAAAAACCAGTGTAGTAG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCATTAGGAGAATCACCTTaGGTTGATTCTCTTAGGCAG +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRALGESP*VDSLRQ
Trigger: CTGCCTAAGAGAATCAACCAAAGGTGATTCTCCTAA...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTATTTCACACCCAAAACTaGGGTCCTGCTAACCTGACA +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVFHTQN*GPANLT
Trigger: TGTCAGGTTAGCAGGACCCAAGTTTTGGGTGTGAAA...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACTCTGAGAAATCCAGCTaGCCAAAGCAAAAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYSEKSS*PKQKEA
Trigger: AGCCTCCTTTTGCTTTGGCAAGCTGGATTTCTCAGA...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp TCTCTCTCAACAATTAGCAGCTTAAGATCTATCAACTACAGTGTTAACGTTCACGGTGAAAACCTTCCTTaGATAGATAGAAACCGTCCC +
Preference number: 5 (lower is better)
Translates to: SLSTISSLRSINYSVNVHGENLP*IDRNRP
Trigger: GGGACGGTTTCTATCTATCAAAGGAAGGTTTTCACC...GTGAACGTTAACACTGTAGTTGATAGATCTTAAGCTGCTAATTGTTGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATGTGGGAACCATAATTTaGCCTGTGTCAGATTACAAT +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNVGTII*PVSDYN
Trigger: ATTGTAATCTGACACAGGCAAAATTATGGTTCCCAC...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGATGCATGGTTACAAACAGCATTAAATGCGTACAACTTCTGGGTCTGGTGAATAGACAGAATAAAGCTTaGAAATTAAGAATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RCMVTNSIKCVQLLGLVNRQNKA*KLRMLG
Trigger: CCCCAGCATTCTTAATTTCAAAGCTTTATTCTGTCT...ATTCACCAGACCCAGAAGTTGTACGCATTTAATGCTGTTTGTAACCATGCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGCATCTTATATGCACTaGGTTGCACAGAATGAGGCT +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVASYMH*VAQNEA
Trigger: AGCCTCATTCTGTGCAACCAAGTGCATATAAGATGC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACGCTCGCTCCCAATATTaGTCTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYARSQY*SWHQTF
Trigger: AAAAGTCTGATGCCAAGACAAATATTGGGAGCGAGC...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp GTGTTAACGTTCACACGTTCACAAGTGTCATTTCTTTACGTTTCAATTCGTGCAAAATCACAACCTCTCTaGGCTATAAGCTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: VLTFTRSQVSFLYVSIRAKSQPL*AISSFH
Trigger: ATGGAAAGAGCTTATAGCCAAGAGAGGTTGTGATTT...TGCACGAATTGAAACGTAAAGAAATGACACTTGTGAACGTGTGAACGTTAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS-3UTR CAA 90 bp AGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAAATGCGCATTCTACCAGGCAAAGCATACTTaGTTACTCTTTTCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: SRQKYPSIIINNVKCAFYQAKHT*LLFSGH
Trigger: ATGCCCTGAAAAGAGTAACAAAGTATGCTTTGCCTG...GTAGAATGCGCATTTTACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp CAAAAAGTTCATAGTGTCCTTTGGCACTCCTGCCTAAAAAGTCACTGCAATATTCTCTTCCAACCATCTTaGTTTTCACATGAAGTAACT +
Preference number: 5 (lower is better)
Translates to: QKVHSVLWHSCLKSHCNILFQPS*FSHEVT
Trigger: AGTTACTTCATGTGAAAACAAAGATGGTTGGAAGAG...AATATTGCAGTGACTTTTTAGGCAGGAGTGCCAAAGGACACTATGAACTTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAGTGGGAACCATAATTTaGCCTGTGTCAGATTACAAT +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVVGTII*PVSDYN
Trigger: ATTGTAATCTGACACAGGCAAAATTATGGTTCCCAC...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS-3UTR CAA 90 bp AGGAATGGAAATTGGAGCAGACAGAAGTACCCTTCAATTATCATAAACAATGTAAGACAGAATAAAGCTTaGAAATTAAGAATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RNGNWSRQKYPSIIINNVRQNKA*KLRMLG
Trigger: CCCCAGCATTCTTAATTTCAAAGCTTTATTCTGTCT...TACATTGTTTATGATAATTGAAGGGTACTTCTGTCTGCTCCAATTTCCATTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426664.6
ENST00000432054.6
ENST00000648771.1
CDS GCA 72 bp CGTCTCCGCCAGCGCCGTCGCTCGAGCTCAAGCGCCTaGTCCTTCCACTGCGGCCGCCGCACCCGGTCCATC +
Preference number: 6 (lower is better)
Translates to: RLRQRRRSSSSA*SFHCGRRTRSI
Trigger: GATGGACCGGGTGCGGCGGCCGCAGTGGAAGGAGCAGGCGCTTGAGCTCGAGCGACGGCGCTGGCGGAGACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393238.8
ENST00000648771.1
CDS GCA 72 bp CGCCGTCGCTCGAGCTCAAGCGCCTGCTCCTTCCACTaGGGCCGCCGCACCCGGTCCATCCCCCACAACCAC +
Preference number: 6 (lower is better)
Translates to: RRRSSSSACSFH*GRRTRSIPHNH
Trigger: GTGGTTGTGGGGGATGGACCGGGTGCGGCGGCCGCAGTGGAAGGAGCAGGCGCTTGAGCTCGAGCGACGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393238.8
ENST00000648771.1
CDS TCA 72 bp ATCCCTGGGCTTCTCACCTTCACAGTCTCAGAGAAGTaGCTTTCACAAAACAGGCAGGTACAGCCGCACCAC +
Preference number: 6 (lower is better)
Translates to: IPGLLTFTVSEK*LSQNRQVQPHH
Trigger: GTGGTGCGGCTGTACCTGCCTGTTTTGTGAAAGTCACTTCTCTGAGACTGTGAAGGTGAGAAGCCCAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS GCA 72 bp AACAGAAAGCTTCTGCCAAACAAGCATCCGTGTGTGTaGGCGCGCACGCAGTTTGCTAGAGCAGCTAATGCA +
Preference number: 6 (lower is better)
Translates to: NRKLLPNKHPCV*ARTQFARAANA
Trigger: TGCATTAGCTGCTCTAGCAAACTGCGTGCGCGCGCACACACACGGATGCTTGTTTGGCAGAAGCTTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CCA 72 bp CACCAAAGAGCCGCAGTGAAGCTTCTAGTGGATCCCTaGGCTTCTCACCTTCACAGTCTCAGAGAAGTGACT +
Preference number: 6 (lower is better)
Translates to: HQRAAVKLLVDP*ASHLHSLREVT
Trigger: AGTCACTTCTCTGAGACTGTGAAGGTGAGAAGCCCAGGGATCCACTAGAAGCTTCACTGCGGCTCTTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS GCA 72 bp AATAACGCTGCAAATGAGGACAGCTACCACTGGGAATaGTTTCCCCCACCAAAGAGCCGCAGTGAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: NNAANEDSYHWE*FPPPKSRSEAS
Trigger: AGAAGCTTCACTGCGGCTCTTTGGTGGGGGAAAGCATTCCCAGTGGTAGCTGTCCTCATTTGCAGCGTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CAA 90 bp AAACTGCAGAGGAGCTGTGGCATAGTCTGTCACTGCTGCACATACTaGGTTTCCGAGAATAACGCTGCAAATGAGGACAGCTACCACTGG +
Preference number: 6 (lower is better)
Translates to: KLQRSCGIVCHCCTY*VSENNAANEDSYHW
Trigger: CCAGTGGTAGCTGTCCTCATTTGCAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS GCA 72 bp TCCAAACTGCAGAGGAGCTGTGGCATAGTCTGTCACTaGTGCACATACTTGGTTTCCGAGAATAACGCTGCA +
Preference number: 6 (lower is better)
Translates to: SKLQRSCGIVCH*CTYLVSENNAA
Trigger: TGCAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CAA 72 bp AGGAGCTGTGGCATAGTCTGTCACTGCTGCACATACTaGGTTTCCGAGAATAACGCTGCAAATGAGGACAGC +
Preference number: 6 (lower is better)
Translates to: RSCGIVCHCCTY*VSENNAANEDS
Trigger: GCTGTCCTCATTTGCAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CAA 90 bp TTCCAACCGTTCGATCAAAACCCCCTGTCAGGCAGTCTGCTGATTTaGCTTGCCACAAAGCTCATCCTTCATTTGTGCACTGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: FQPFDQNPLSGSLLI*LATKLILHLCTARE
Trigger: TTCTCTGGCAGTGCACAAATGAAGGATGAGCTTTGTGGCAAGCAAAATCAGCAGACTGCCTGACAGGGGGTTTTGATCGAACGGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CCA 72 bp TCCATTTGTTCCAGCTTCCAAACTGCAGAGGAGCTGTaGCATAGTCTGTCACTGCTGCACATACTTGGTTTC +
Preference number: 6 (lower is better)
Translates to: SICSSFQTAEEL*HSLSLLHILGF
Trigger: GAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGTTTGGAAGCTGGAACAAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS TCA 72 bp CTGCCTGTTTCACCTAACTCCAAGATTACGACATCATaGTCCTTCCAACTGTCCTCACCTACACGAGTCTCA +
Preference number: 6 (lower is better)
Translates to: LPVSPNSKITTS*SFQLSSPTRVS
Trigger: TGAGACTCGTGTAGGTGAGGACAGTTGGAAGGATCATGATGTCGTAATCTTGGAGTTAGGTGAAACAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503256.5
CDS GCA 72 bp AAACTGCAGAGGAGCTGTGGCATAGTCTGTCACTGCTaGACATACTTGGTTTCCGAGAATAACGCTGCAAAT +
Preference number: 6 (lower is better)
Translates to: KLQRSCGIVCHC*TYLVSENNAAN
Trigger: ATTTGCAGCGTTATTCTCGGAAACCAAGTATGTGCAGCAGTGACAGACTATGCCACAGCTCCTCTGCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CAA 72 bp TTCGATCAAAACCCCCTGTCAGGCAGTCTGCTGATTTaGCTTGCCACAAAGCTCATCCTTCATTTGTGCACT +
Preference number: 6 (lower is better)
Translates to: FDQNPLSGSLLI*LATKLILHLCT
Trigger: AGTGCACAAATGAAGGATGAGCTTTGTGGCAAGCAAAATCAGCAGACTGCCTGACAGGGGGTTTTGATCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS TCA 72 bp GCTTTCTATATCTGGGAGCCTAGGAGAACTCTGTGCTaGATAAACAGAAAGCTTCTGCCAAACAAGCATCCG +
Preference number: 6 (lower is better)
Translates to: AFYIWEPRRTLC*INRKLLPNKHP
Trigger: CGGATGCTTGTTTGGCAGAAGCTTTCTGTTTATTCAGCACAGAGTTCTCCTAGGCTCCCAGATATAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS CAA 72 bp AAATCACAACCTCTCTTGGCTATAAGCTCTTTCCATTaGTTCCAGCTTCCAAACTGCAGAGGAGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: KSQPLLAISSFH*FQLPNCRGAVA
Trigger: TGCCACAGCTCCTCTGCAGTTTGGAAGCTGGAACAAATGGAAAGAGCTTATAGCCAAGAGAGGTTGTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432054.6
CDS TCA 72 bp AAAGCTGTTTCACCTAACTCCAAGATTACGACATCATaGTCCTTCCAACTGTCCTCACCTACACGAGTCTCA +
Preference number: 6 (lower is better)
Translates to: KAVSPNSKITTS*SFQLSSPTRVS
Trigger: TGAGACTCGTGTAGGTGAGGACAGTTGGAAGGATCATGATGTCGTAATCTTGGAGTTAGGTGAAACAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508869.5
ENST00000512902.5
ENST00000513411.5
CDS TCA 72 bp ACGGACTGCCTAGGAATGTGTGGACTATTCAGGATTTaGACAAGCATGCTCTTCCAACCATCTTTGTTTTCA +
Preference number: 6 (lower is better)
Translates to: TDCLGMCGLFRI*TSMLFQPSLFS
Trigger: TGAAAACAAAGATGGTTGGAAGAGCATGCTTGTTCAAATCCTGAATAGTCCACACATTCCTAGGCAGTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509440.5
ENST00000648771.1
CDS CAA 72 bp CTTGTCCAATTCATCCTACATATTTGGTCTTTGTCCTaGATTCCTGGCAGAGCTCCTAAAACCCTTAGGTTT +
Preference number: 6 (lower is better)
Translates to: LVQFILHIWSLS*IPGRAPKTLRF
Trigger: AAACCTAAGGGTTTTAGGAGCTCTGCCAGGAATCAAGGACAAAGACCAAATATGTAGGATGAATTGGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503256.5
CDS CAA 90 bp AGTCTCATCCTTGTCCAATTCATCCTACATATTTGGTCTTTGTCCTaGATTCCTGGCAGAGCTCCTAAAACCCTTAGGTTTTCCTCAATA +
Preference number: 6 (lower is better)
Translates to: SLILVQFILHIWSLS*IPGRAPKTLRFSSI
Trigger: TATTGAGGAAAACCTAAGGGTTTTAGGAGCTCTGCCAGGAATCAAGGACAAAGACCAAATATGTAGGATGAATTGGACAAGGATGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503256.5
CDS TCA 72 bp TTGTCCAATTCATCCTACATATTTGGTCTTTGTCCTTaGTTCCTGGCAGAGCTCCTAAAACCCTTAGGTTTT +
Preference number: 6 (lower is better)
Translates to: LSNSSYIFGLCP*FLAELLKPLGF
Trigger: AAAACCTAAGGGTTTTAGGAGCTCTGCCAGGAATCAAGGACAAAGACCAAATATGTAGGATGAATTGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503256.5