RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000141524

Ensembl transcript IDs: ENST00000306591.11, ENST00000322914.7, ENST00000392467.7, ENST00000585849.1, ENST00000586126.1, ENST00000586271.1, ENST00000586697.5, ENST00000587480.1, ENST00000588087.5, ENST00000588792.5, ENST00000589217.1, ENST00000589271.5, ENST00000589553.5, ENST00000589933.1, ENST00000590162.1, ENST00000590494.1, ENST00000590602.6, ENST00000592063.5, ENST00000592076.5, ENST00000592594.5, ENST00000593044.5

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGTCCGGAGACAGAAACGAGGAGAGGACGGGCTCACCCAGCCGTaGGGCCGCGGGCTGGACATCCAGTGGGAGTGGGAAGCCGCCGTC +
Preference number: 1 (lower is better)
Translates to: WVRRQKRGEDGLTQP*GRGLDIQWEWEAAV
Trigger: GACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAGCCCGTCCTCTCCTCGTTTCTGTCTCCGGACCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GAGGACGGGCTCACCCAGCCGTGGGGCCGCGGGCTGGACATCCAGTaGGAGTGGGAAGCCGCCGTCTCAAGGCAGAATTCCCTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: EDGLTQPWGRGLDIQ*EWEAAVSRQNSLSG
Trigger: CCCAGAGAGGGAATTCTGCCTTGAGACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAGCCCGTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GGGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTaGCGCGGTCCAGCCCCTGCCATCTGGGGCTTGGCCAGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: GREFRLVKGSKRIKP*RGPAPAIWGLASRG
Trigger: CCCTCTGCTGGCCAAGCCCCAGATGGCAGGGGCTGGACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp AGAAACGAGGAGAGGACGGGCTCACCCAGCCGTGGGGCCGCGGGCTaGACATCCAGTGGGAGTGGGAAGCCGCCGTCTCAAGGCAGAATT +
Preference number: 1 (lower is better)
Translates to: RNEERTGSPSRGAAG*TSSGSGKPPSQGRI
Trigger: AATTCTGCCTTGAGACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAGCCCGTCCTCTCCTCGTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp GCACCCAGGGACACACTGAAGCCCAGGCCTCCAGCACGCAAGGGCTaGTCTGAAGAAATACGGGAGGTCCTCACTGGAGGGTCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: APRDTLKPRPPARKG*SEEIREVLTGGSGA
Trigger: GGCCCCAGACCCTCCAGTGAGGACCTCCCGTATTTCTTCAGAGCAGCCCTTGCGTGCTGGAGGCCTGGGCTTCAGTGTGTCCCTGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GCTCACTTGTGCAGGTGTAAGCCCCTCCTGGGCGCGAGTTCAGGCTaGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: AHLCRCKPLLGASSG*SKAASESSPGAVQP
Trigger: GGGCTGGACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCCCAGGAGGGGCTTACACCTGCACAAGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GAAGAAATACGGGAGGTCCTCACTGGAGGGTCTGGGGCCACACGGTaGGTCCGGAGACAGAAACGAGGAGAGGACGGGCTCACCCAGCCG +
Preference number: 1 (lower is better)
Translates to: EEIREVLTGGSGATR*VRRQKRGEDGLTQP
Trigger: CGGCTGGGTGAGCCCGTCCTCTCCTCGTTTCTGTCTCCGGACCCACCGTGTGGCCCCAGACCCTCCAGTGAGGACCTCCCGTATTTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp CAGGGACACACTGAAGCCCAGGCCTCCAGCACGCAAGGGCTGCTCTaGAGAAATACGGGAGGTCCTCACTGGAGGGTCTGGGGCCACACG +
Preference number: 1 (lower is better)
Translates to: QGHTEAQASSTQGLL*RNTGGPHWRVWGHT
Trigger: CGTGTGGCCCCAGACCCTCCAGTGAGGACCTCCCGTATTTCTTCAGAGCAGCCCTTGCGTGCTGGAGGCCTGGGCTTCAGTGTGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp CCAGATGCCAACTCTGTCGGGCCCCTGTGGCAGCACCCAGATGTCTaGAGAGCACAGGAGCATCCCCATGGGATTGGGTGGGCTAGACCC +
Preference number: 1 (lower is better)
Translates to: PDANSVGPLWQHPDV*RAQEHPHGIGWARP
Trigger: GGGTCTAGCCCACCCAATCCCATGGGGATGCTCCTGTGCTCTGCAGACATCTGGGTGCTGCCACAGGGGCCCGACAGAGTTGGCATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GTGCTTCTCGGCGGAGCTGTGGCTGATGGGCTCCTGGTGCAGGACTaGCCCCTGAACAGCACAAGTGTAGTATGCCTGGGCCCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: VLLGGAVADGLLVQD*PLNSTSVVCLGPRS
Trigger: TGACCTGGGGCCCAGGCATACTACACTTGTGCTGTTCAGGGGCCAGTCCTGCACCAGGAGCCCATCAGCCACAGCTCCGCCGAGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GGATTGGGTGGGCTAGACCCAGCGTGGGGGTCTGCTAGCAGCCAGTaGCATCTCCATCTGGGTCTGACCCTTTTCTGGGCCCATCGCTCT +
Preference number: 1 (lower is better)
Translates to: GLGGLDPAWGSASSQ*HLHLGLTLFWAHRS
Trigger: AGAGCGATGGGCCCAGAAAAGGGTCAGACCCAGATGGAGATGCCACTGGCTGCTAGCAGACCCCCACGCTGGGTCTAGCCCACCCAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTGTaGCAGCACCCAGATGTCTGCAGAGCACAGGAGCATCCCCATGGG +
Preference number: 1 (lower is better)
Translates to: HLAQIHPDANSVGPL*QHPDVCRAQEHPHG
Trigger: CCCATGGGGATGCTCCTGTGCTCTGCAGACATCTGGGTGCTGCCACAGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CAGTGGCAGGCGCACGTCCCCAGCCAGAGAGGGACCGTGATGGTTTaGAGGACAGCATCTGCACAGATAGGGGCTGGAAACCCTACGTCG +
Preference number: 1 (lower is better)
Translates to: QWQAHVPSQRGTVMV*RTASAQIGAGNPTS
Trigger: CGACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGGCTGGGGACGTGCGCCTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GGCCGTGGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTaGTGTTACAGACAGGCCTCTGAAGACAAACCGAGCACCCCAGCG +
Preference number: 1 (lower is better)
Translates to: GRGLQGDQSVPPGWH*CYRQASEDKPSTPA
Trigger: CGCTGGGGTGCTCGGTTTGTCTTCAGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCCACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp GGGCCAGCCCCACCTCACCAAGCCCTGTTCGCCTCCAAGCACAGGTaGTGGTTACCTATGCCTGGGAGGCAACTGTCCCCACAACTCATT +
Preference number: 1 (lower is better)
Translates to: GPAPPHQALFASKHR*WLPMPGRQLSPQLI
Trigger: AATGAGTTGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGCGAACAGGGCTTGGTGAGGTGGGGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp CGTCCCCAGCCAGAGAGGGACCGTGATGGTTTGGAGGACAGCATCTaGACAGATAGGGGCTGGAAACCCTACGTCGGTCCCTGTGGACTG +
Preference number: 1 (lower is better)
Translates to: RPQPERDRDGLEDSI*TDRGWKPYVGPCGL
Trigger: CAGTCCACAGGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGGCTGGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CAATCCGTGCCTGCTCGGCTCACTTGTGCAGGTGTAAGCCCCTCCTaGGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCC +
Preference number: 1 (lower is better)
Translates to: QSVPARLTCAGVSPS*ARVQAGQRQQANQA
Trigger: GGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCCCAGGAGGGGCTTACACCTGCACAAGTGAGCCGAGCAGGCACGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GGGCTCAACAGGTCACAACCAATGATCATGCTGGCAAGCCAGCAGTaGCAGGCGCACGTCCCCAGCCAGAGAGGGACCGTGATGGTTTGG +
Preference number: 1 (lower is better)
Translates to: GLNRSQPMIMLASQQ*QAHVPSQRGTVMVW
Trigger: CCAAACCATCACGGTCCCTCTCTGGCTGGGGACGTGCGCCTGCCACTGCTGGCTTGCCAGCATGATCATTGGTTGTGACCTGTTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp GTCCTTTGTGAGGCTGGCAAGATGGGCTCAACAGGTCACAACCAATaGTCATGCTGGCAAGCCAGCAGTGGCAGGCGCACGTCCCCAGCC +
Preference number: 1 (lower is better)
Translates to: VLCEAGKMGSTGHNQ*SCWQASSGRRTSPA
Trigger: GGCTGGGGACGTGCGCCTGCCACTGCTGGCTTGCCAGCATGATCATTGGTTGTGACCTGTTGAGCCCATCTTGCCAGCCTCACAAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp CATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTCGATaGGATCACTGGGCCCCACAGCCTGGCCTGGTTGACACGAAAGAC +
Preference number: 1 (lower is better)
Translates to: HSSSTRSQQHLGPSR*DHWAPQPGLVDTKD
Trigger: GTCTTTCGTGTCAACCAGGCCAGGCTGTGGGGCCCAGTGATCTCATCGAGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp GAGGAGGTGGCATTTGCCCTGGGCCTGGGAGACCAGGTTGGATTTTaGCAGACTGGGAACTCGGGGGACAGGAGGGCAGCACAGTGTAAG +
Preference number: 1 (lower is better)
Translates to: EEVAFALGLGDQVGF*QTGNSGDRRAAQCK
Trigger: CTTACACTGTGCTGCCCTCCTGTCCCCCGAGTTCCCAGTCTGTCAAAATCCAACCTGGTCTCCCAGGCCCAGGGCAAATGCCACCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CCAGCCCCACCTCACCAAGCCCTGTTCGCCTCCAAGCACAGGTGCTaGTTACCTATGCCTGGGAGGCAACTGTCCCCACAACTCATTTGC +
Preference number: 1 (lower is better)
Translates to: PAPPHQALFASKHRC*LPMPGRQLSPQLIC
Trigger: GCAAATGAGTTGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGCGAACAGGGCTTGGTGAGGTGGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GACACTGGCCGTGGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTaGCATTGGTGTTACAGACAGGCCTCTGAAGACAAACCGAGCACC +
Preference number: 1 (lower is better)
Translates to: DTGRGLQGDQSVPPG*HWCYRQASEDKPST
Trigger: GGTGCTCGGTTTGTCTTCAGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCCACGGCCAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTaGGACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGC +
Preference number: 1 (lower is better)
Translates to: PRGPSKSVHLVTSVV*DGSKKMPGLAWSPG
Trigger: GCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGTCCCAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp TTCTATTTCCTGAGTCTTCCTCTGAAGGGTGGAGACACAGGGCCCTaGTGGGAAAGGTCCAGGCCTGAGAACCTCCCGGCCACACGTCCC +
Preference number: 1 (lower is better)
Translates to: FYFLSLPLKGGDTGP*WERSRPENLPATRP
Trigger: GGGACGTGTGGCCGGGAGGTTCTCAGGCCTGGACCTTTCCCATCAGGGCCCTGTGTCTCCACCCTTCAGAGGAAGACTCAGGAAATAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR TCA 90 bp ACTTTCTGGACTGCCCACGCAGCTTCACCCAGCAGCACTCGCACCTaGAGATGCTGCCACAGTTGGCTGCCCAGAATCAGCACCAGCTAC +
Preference number: 1 (lower is better)
Translates to: TFWTAHAASPSSTRT*RCCHSWLPRISTSY
Trigger: GTAGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCTTCAGGTGCGAGTGCTGCTGGGTGAAGCTGCGTGGGCAGTCCAGAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp CTCAGCTCTGCGCGGCCGAGCCTCAGCAAGAGTTCGTTTTGTGCCTaGGTTACTACTACAGGGGCAAACTGTACCCGTGCCTGTGCGCTG +
Preference number: 1 (lower is better)
Translates to: LSSARPSLSKSSFCA*VTTTGANCTRACAL
Trigger: CAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp AAACCCTACGTCGGTCCCTGTGGACTGTCACGTCACTTTCTGGACTaGCCACGCAGCTTCACCCAGCAGCACTCGCACCTGAAGATGCTG +
Preference number: 1 (lower is better)
Translates to: KPYVGPCGLSRHFLD*PRSFTQQHSHLKML
Trigger: CAGCATCTTCAGGTGCGAGTGCTGCTGGGTGAAGCTGCGTGGGCAGTCCAGAAAGTGACGTGACAGTCCACAGGGACCGACGTAGGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp TCCCTTCCTAGGACACTGGCCGTGGCCTTCAGGGTGACCAGTCAGTaGCACCGGGTTGGCATTGGTGTTACAGACAGGCCTCTGAAGACA +
Preference number: 1 (lower is better)
Translates to: SLPRTLAVAFRVTSQ*HRVGIGVTDRPLKT
Trigger: TGTCTTCAGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCCACGGCCAGTGTCCTAGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp GATGCTGCCACAGTTGGCTGCCCAGAATCAGCACCAGCTACTTGCTaGGGCCCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAA +
Preference number: 1 (lower is better)
Translates to: DAATVGCPESAPATC*GPEAPLGSDPPRCQ
Trigger: TTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp CAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTTaGTACAGCGGCCCCATGAGGCGAGGAGCTGGGAGGTCACAGAAC +
Preference number: 1 (lower is better)
Translates to: QMGARHGTQHTNCVT*YSGPMRRGAGRSQN
Trigger: GTTCTGTGACCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp CGCAGGATCCACGTGGAAACAAAGCTGCTTAGCTCTGCATATCAGTaGTTCTCGGCGGAGCTGTGGCTGATGGGCTCCTGGTGCAGGACT +
Preference number: 1 (lower is better)
Translates to: RRIHVETKLLSSAYQ*FSAELWLMGSWCRT
Trigger: AGTCCTGCACCAGGAGCCCATCAGCCACAGCTCCGCCGAGAAGCACTGATATGCAGAGCTAAGCAGCTTTGTTTCCACGTGGATCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp AACCCTCAGCTCTGCGCGGCCGAGCCTCAGCAAGAGTTCGTTTTGTaGCTGAGTTACTACTACAGGGGCAAACTGTACCCGTGCCTGTGC +
Preference number: 1 (lower is better)
Translates to: NPQLCAAEPQQEFVL*LSYYYRGKLYPCLC
Trigger: GCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAGCTGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CCTGAGTTACTACTACAGGGGCAAACTGTACCCGTGCCTGTGCGCTaGGAGAACAAGGTCAGCGCCCAAGGGTGTGCAAAGGATGTGGCA +
Preference number: 1 (lower is better)
Translates to: PELLLQGQTVPVPVR*ENKVSAQGCAKDVA
Trigger: TGCCACATCCTTTGCACACCCTTGGGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp TTGTGCCTGAGTTACTACTACAGGGGCAAACTGTACCCGTGCCTGTaGGCTGGGAGAACAAGGTCAGCGCCCAAGGGTGTGCAAAGGATG +
Preference number: 1 (lower is better)
Translates to: LCLSYYYRGKLYPCL*AGRTRSAPKGVQRM
Trigger: CATCCTTTGCACACCCTTGGGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp AGGGACCGTGATGGTTTGGAGGACAGCATCTGCACAGATAGGGGCTaGAAACCCTACGTCGGTCCCTGTGGACTGTCACGTCACTTTCTG +
Preference number: 1 (lower is better)
Translates to: RDRDGLEDSICTDRG*KPYVGPCGLSRHFL
Trigger: CAGAAAGTGACGTGACAGTCCACAGGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATaGACCAAGAAAACCTACGCAGGATCCACGTGGAAACAAAGCTGC +
Preference number: 1 (lower is better)
Translates to: GASREDPLQECGVYG*TKKTYAGSTWKQSC
Trigger: GCAGCTTTGTTTCCACGTGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp CGGCCCCTCTCGATGAGATCACTGGGCCCCACAGCCTGGCCTGGTTaGCACGAAAGACTGACTAGCACACACGGTAATTCTCCAGAAATA +
Preference number: 1 (lower is better)
Translates to: RPLSMRSLGPTAWPG*HERLTSTHGNSPEI
Trigger: TATTTCTGGAGAATTACCGTGTGTGCTAGTCAGTCTTTCGTGTCAACCAGGCCAGGCTGTGGGGCCCAGTGATCTCATCGAGAGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp GACCTCGTGGGCCTGGGTGTCCAGGGCACCATTTCCACCCATGGGTaGAAAAGAGGCTTGAGGAAGACAACAGGTTCTTCACCTGCATCT +
Preference number: 1 (lower is better)
Translates to: DLVGLGVQGTISTHG*KRGLRKTTGSSPAS
Trigger: AGATGCAGGTGAAGAACCTGTTGTCTTCCTCAAGCCTCTTTTTCACCCATGGGTGGAAATGGTGCCCTGGACACCCAGGCCCACGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp TTCGTTTTGTGCCTGAGTTACTACTACAGGGGCAAACTGTACCCGTaGCTGTGCGCTGGGAGAACAAGGTCAGCGCCCAAGGGTGTGCAA +
Preference number: 1 (lower is better)
Translates to: FVLCLSYYYRGKLYP*LCAGRTRSAPKGVQ
Trigger: TTGCACACCCTTGGGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp CTCACCAAGCCCTGTTCGCCTCCAAGCACAGGTGCTGGTTACCTATaGCTGGGAGGCAACTGTCCCCACAACTCATTTGCAACTGATATG +
Preference number: 1 (lower is better)
Translates to: LTKPCSPPSTGAGYL*LGGNCPHNSFATDM
Trigger: CATATCAGTTGCAAATGAGTTGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGCGAACAGGGCTTGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp GAAACTCAAAATGCACTTGAACCTGGAAGCGGCAACCCTCAGCTCTaGGCGGCCGAGCCTCAGCAAGAGTTCGTTTTGTGCCTGAGTTAC +
Preference number: 1 (lower is better)
Translates to: ETQNALEPGSGNPQL*AAEPQQEFVLCLSY
Trigger: GTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAGCTGAGGGTTGCCGCTTCCAGGTTCAAGTGCATTTTGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp CCAAGCCCTGTTCGCCTCCAAGCACAGGTGCTGGTTACCTATGCCTaGGAGGCAACTGTCCCCACAACTCATTTGCAACTGATATGTCTC +
Preference number: 1 (lower is better)
Translates to: PSPVRLQAQVLVTYA*EATVPTTHLQLICL
Trigger: GAGACATATCAGTTGCAAATGAGTTGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGCGAACAGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCATaGTACGCAGCACACAAACTGTGTCACTTGATACAGCGGCCCCAT +
Preference number: 1 (lower is better)
Translates to: EQTWPPCNTSNGCQA*YAAHKLCHLIQRPH
Trigger: ATGGGGCCGCTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp TCATCATCGAGAGGCACAGCCAAGCTTTCCAGCTCTCCACCCCCGTaGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: SSSRGTAKLSSSPPP*PIQVCSSGNFCCLG
Trigger: TCCCAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCTGGAAAGCTTGGCTGTGCCTCTCGATGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp AATTTGTCTCCTGCTCCAGTAGATGCTACAGCATCACCCAATGGTTaGCGCATCGCTCTGGTCACAATCCGTGCCTGCTCGGCTCACTTG +
Preference number: 1 (lower is better)
Translates to: NLSPAPVDATASPNG*RIALVTIRACSAHL
Trigger: CAAGTGAGCCGAGCAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCATCTACTGGAGCAGGAGACAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp GATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCTGCATaGGTTCCCTCTGTAATTTCCTCAGAGCTCACATACGTACCTCTC +
Preference number: 1 (lower is better)
Translates to: DVYFARCDWESCPAA*VPSVISSELTYVPL
Trigger: GAGAGGTACGTATGTGAGCTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp GGCTGCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATaGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTTGAT +
Preference number: 1 (lower is better)
Translates to: GCSHRANMASLQHLK*VPGMVRSTQTVSLD
Trigger: ATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp TGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCACGTaGAAACAAAGCTGCTTAGCTCTGCATATCAGTGCTTCTCGGCGG +
Preference number: 1 (lower is better)
Translates to: CGVYGWTKKTYAGST*KQSCLALHISASRR
Trigger: CCGCCGAGAAGCACTGATATGCAGAGCTAAGCAGCTTTGTTTCCACGTGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTaGCAGGCATGGTACGCAGCACACAAACTGTGTCACTTGATACAG +
Preference number: 1 (lower is better)
Translates to: ALIEQTWPPCNTSNG*QAWYAAHKLCHLIQ
Trigger: CTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp TATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCTaGATGCGTTCCCTCTGTAATTTCCTCAGAGCTCACATACGTACC +
Preference number: 1 (lower is better)
Translates to: YGCLLCTLRLGELSR*MRSLCNFLRAHIRT
Trigger: GGTACGTATGTGAGCTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp TCTAAATTTGTCTCCTGCTCCAGTAGATGCTACAGCATCACCCAATaGTTGACGCATCGCTCTGGTCACAATCCGTGCCTGCTCGGCTCA +
Preference number: 1 (lower is better)
Translates to: SKFVSCSSRCYSITQ*LTHRSGHNPCLLGS
Trigger: TGAGCCGAGCAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCATCTACTGGAGCAGGAGACAAATTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 90 bp TCCTGTCATAAGCAGCTAGTACTGTCCTTTGTGAGGCTGGCAAGATaGGCTCAACAGGTCACAACCAATGATCATGCTGGCAAGCCAGCA +
Preference number: 1 (lower is better)
Translates to: SCHKQLVLSFVRLAR*AQQVTTNDHAGKPA
Trigger: TGCTGGCTTGCCAGCATGATCATTGGTTGTGACCTGTTGAGCCCATCTTGCCAGCCTCACAAAGGACAGTACTAGCTGCTTATGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 90 bp TGGGTGTCCAGGGCACCATTTCCACCCATGGGTGAAAAAGAGGCTTaGGGAAGACAACAGGTTCTTCACCTGCATCTGTGGATATATATT +
Preference number: 1 (lower is better)
Translates to: WVSRAPFPPMGEKEA*GRQQVLHLHLWIYI
Trigger: AATATATATCCACAGATGCAGGTGAAGAACCTGTTGTCTTCCTCAAGCCTCTTTTTCACCCATGGGTGGAAATGGTGCCCTGGACACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 90 bp GTGTTTTTGTTTGTTAATACAGGGTCTCTGTCTCCCACGCTGGAGTaGAGTGATGTAATCTCGGCTCACTGCAACCTTGACCTCAAGGTT +
Preference number: 1 (lower is better)
Translates to: VFLFVNTGSLSPTLE*SDVISAHCNLDLKV
Trigger: AACCTTGAGGTCAAGGTTGCAGTGAGCCGAGATTACATCACTGCACTCCAGCGTGGGAGACAGAGACCCTGTATTAACAAACAAAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTGGCCGTGCTCTGGGTaGCCTCGGGCCGCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRWPCSG*PRAARV
Trigger: CACTCTGGCGGCCCGAGGGCACCCAGAGCACGGCCA...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR-3UTR CCA 90 bp GACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGCCAGGATGCGGAGTGTaGCCGTGCTCTGGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: DKVPEQGPAAPAPKLHRAPGCGV*PCSGCP
Trigger: AGGGCACCCAGAGCACGGCCACACTCCGCATCCTGG...CGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR-3UTR CCA 90 bp CAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGACTCGGCTGCGGCCAATaGTGCGGCTGGGCATGCTGG +
Preference number: 2 (lower is better)
Translates to: QGPAAPAPKLHRAVVVLGLGCGQ*CGWACW
Trigger: CCAGCATGCCCAGCCGCACCATTGGCCGCAGCCGAG...TCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR-3UTR TCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTGTAGTACTGGGAGATaGTGGCACCTCGGCTGCGGC +
Preference number: 2 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRCSTGR*WHLGCG
Trigger: GCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACA...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACACGGGAGGTCCTCACTaGAGGGTCTGGGGCCACACG +
Preference number: 2 (lower is better)
Translates to: TAARRCRGLPGVLAEECHTGGPH*RVWGHT
Trigger: CGTGTGGCCCCAGACCCTCCAGTGAGGACCTCCCGT...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp GGCAGCACCCAGATGTCTGCAGAGCACAGGAGCATCCCCATGGGATaGGGTGGGCTAGACCCAGCGTGGGGGTCTGCTAGCAGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: GSTQMSAEHRSIPMG*GGLDPAWGSASSQW
Trigger: CCACTGGCTGCTAGCAGACCCCCACGCTGGGTCTAGCCCACCCAATCCCATGGGGATGCTCCTGTGCTCTGCAGACATCTGGGTGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATTGCGGCTGGGCATGCTaGCCAGGATGCGGAGTGTGG +
Preference number: 2 (lower is better)
Translates to: PAAPAPKLHRAVVVLGDDCGWAC*PGCGVW
Trigger: CCACACTCCGCATCCTGGCCAGCATGCCCAGCCGCA...ATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTCTGGGGCCACACGGTaGGTCCGGAGACAGAAACGA +
Preference number: 2 (lower is better)
Translates to: TAARRCRGLPGVLAEECHSGATR*VRRQKR
Trigger: TCGTTTCTGTCTCCGGACCCACCGTGTGGCCCCAGA...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp GCAGTGGCAGGCGCACGTCCCCAGCCAGAGAGGGACCGTGATGGTTaGGAGGACAGCATCTGCACAGATAGGGGCTGGAAACCCTACGTC +
Preference number: 2 (lower is better)
Translates to: AVAGARPQPERDRDG*EDSICTDRGWKPYV
Trigger: GACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGGCTGGGGACGTGCGCCTGCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGGGGCTGGACATCCAGTaGGAGTGGGAAGCCGCCGTC +
Preference number: 2 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMGLDIQ*EWEAAV
Trigger: GACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCC...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGCCTCACTGGAGGGTCTaGGGCCACACGGTGGGTCCG +
Preference number: 2 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSPHWRV*GHTVGP
Trigger: CGGACCCACCGTGTGGCCCCAGACCCTCCAGTGAGG...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTCTGTCTGCGCTCCCTaGGGCAAGGTCAAAGGTGGA +
Preference number: 2 (lower is better)
Translates to: TAARRCRGLPGVLAEECHSVCAP*GKVKGG
Trigger: TCCACCTTTGACCTTGCCCCAGGGAGCGCAGACAGA...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGCCCAAGCGCAGCTCCTaGAGGCCTGGAGCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLPKRSS*RPGALG
Trigger: GCCCAGGGCTCCAGGCCTGCAGGAGCTGCGCTTGGG...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGGGACCGTGATGGTTTaGAGGACAGCATCTGCACAG +
Preference number: 2 (lower is better)
Translates to: TAARRCRGLPGVLAEECHGTVMV*RTASAQ
Trigger: CTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCGTGGGGCCGCGGGCTaGACATCCAGTGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCRGAAG*TSSGSG
Trigger: CCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp CGCAGCTTCACCCAGCAGCACTCGCACCTGAAGATGCTGCCACAGTaGGCTGCCCAGAATCAGCACCAGCTACTTGCTGAGGCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: RSFTQQHSHLKMLPQ*AAQNQHQLLAEAQK
Trigger: CTTCTGGGCCTCAGCAAGTAGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCTTCAGGTGCGAGTGCTGCTGGGTGAAGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCCGTGGCCTTCAGGGTaGCCAGTCAGTGCCACCGGG +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCPWPSG*PVSATG
Trigger: CCCGGTGGCACTGACTGGTCACCCTGAAGGCCACGG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGCCAGTAGGCGGAGGTTaGGGTGAGCCAAGATCGTCC +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQPVGGG*GEPRSS
Trigger: GGACGATCTTGGCTCACCGCAACCTCCGCCTACTGG...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTCTGGCAAGCCAGCAGTaGCAGGCGCACGTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTLASQQ*QAHVPS
Trigger: GCTGGGGACGTGCGCCTGCCACTGCTGGCTTGCCAG...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp GGCAACCCTCAGCTCTGCGCGGCCGAGCCTCAGCAAGAGTTCGTTTaGTGCCTGAGTTACTACTACAGGGGCAAACTGTACCCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GNPQLCAAEPQQEFV*CLSYYYRGKLYPCL
Trigger: CAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAGCTGAGGGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGGCACCAGCTACTTGCTaGGGCCCAGAAGCACCACTT +
Preference number: 2 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMAPATC*GPEAPL
Trigger: AAGTGGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGC...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGGCCAGAGAGGGACCGTaGTGGTTTGGAGGACAGCAT +
Preference number: 2 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMAREGP*WFGGQH
Trigger: ATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGGC...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGCATGCATGCGTTTGTaGCAGCCTGGTGCTCGGATG +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQACMRL*QPGARM
Trigger: CATCCGAGCACCAGGCTGTCACAAACGCATGCATGC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGTGCTCGGCTCACTTGTaGAGGTGTAAGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQCSAHL*RCKPLL
Trigger: CAGGAGGGGCTTACACCTGCACAAGTGAGCCGAGCA...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTTCTGGTCACAATCCGTaGCTGCTCGGCTCACTTGTG +
Preference number: 2 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPSGHNP*LLGSLV
Trigger: CACAAGTGAGCCGAGCAGGCACGGATTGTGACCAGA...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCACAAGCCTGGAACCCTaGGCCGTGACGGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTTSLEP*AVTGWS
Trigger: GGACCAGCCCGTCACGGCGCAGGGTTCCAGGCTTGT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGCGTCACTTTCTGGACTaGCCACGCAGCTTCACCCAG +
Preference number: 2 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMRHFLD*PRSFTQ
Trigger: CTGGGTGAAGCTGCGTGGGCAGTCCAGAAAGTGACG...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGATCCTCTGCAGGAGTaGGGTGTCTACGGATGGACC +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQDPLQE*GVYGWT
Trigger: GGTCCATCCGTAGACACCGCACTCCTGCAGAGGATC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGGGAGGAGGTGGCATTTaGCCTGGGCCTGGGAGACCA +
Preference number: 2 (lower is better)
Translates to: CDWESCPAACVPSVISSEGGGGI*PGPGRP
Trigger: TGGTCTCCCAGGCCCAGGGCAAATGCCACCTCCTCC...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCCTGCCATCTGGGGCTTaGCCAGCAGAGGGCGCCCCC +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPLPSGA*PAEGAP
Trigger: GGGGGCGCCCTCTGCTGGCCAAGCCCCAGATGGCAG...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTTCTGCTAGCAGCCAGTaGCATCTCCATCTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPSASSQ*HLHLGL
Trigger: CAGACCCAGATGGAGATGCCACTGGCTGCTAGCAGA...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGCATGAGGCGAGGAGCTaGGAGGTCACAGAACATGCC +
Preference number: 2 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMHEARS*EVTEHA
Trigger: GGCATGTTCTGTGACCTCCCAGCTCCTCGCCTCATG...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACAGTTCGTTTTGTGCCTaGGTTACTACTACAGGGGCA +
Preference number: 2 (lower is better)
Translates to: TAARRCRGLPGVLAEECHSSFCA*VTTTGA
Trigger: TGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACT...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAGCGCGGTCCAGCCCCTaGCATCTGGGGCTTGGCCAG +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAARSSP*HLGLGQ
Trigger: CTGGCCAAGCCCCAGATGGCAGGGGCTGGACCGCGC...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTCAGCACCCAGATGTCTaGAGAGCACAGGAGCATCCC +
Preference number: 2 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSQHPDV*RAQEHP
Trigger: GGGATGCTCCTGTGCTCTGCAGACATCTGGGTGCTG...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTGGCGCGAGTTCAGGCTaGTCAAAGGCAGCAAGCGAA +
Preference number: 2 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSGASSG*SKAASE
Trigger: TTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGTTGACGCATCGCTCTaGTCACAATCCGTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQVDASL*SQSVPA
Trigger: AGCAGGCACGGATTGTGACCAGAGCGATGCGTCAAC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCATGGGCTGTGACAGGCTaGTCCCCACAAGCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPWAVTG*SPQAWN
Trigger: GTTCCAGGCTTGTGGGGACCAGCCTGTCACAGCCCA...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTTCTGTCGGGCCCCTGTaGCAGCACCCAGATGTCTGC +
Preference number: 2 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTSVGPL*QHPDVC
Trigger: GCAGACATCTGGGTGCTGCCACAGGGGCCCGACAGA...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGGGCAAGGTCAAAGGTaGACCCGCCCACTGTGGGTC +
Preference number: 2 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLGQGQR*TRPLWV
Trigger: GACCCACAGTGGGCGGGTCCACCTTTGACCTTGCCC...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp TCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTaGATACAGCGGCCCCATGAGGCGAGGAGCTGGGAGGTCACAGAA +
Preference number: 2 (lower is better)
Translates to: SNGCQAWYAAHKLCH*IQRPHEARSWEVTE
Trigger: TTCTGTGACCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGGCATCACCCAATGGTTaGCGCATCGCTCTGGTCACA +
Preference number: 2 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSASPNG*RIALVT
Trigger: TGTGACCAGAGCGATGCGTCAACCATTGGGTGATGC...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGTCACAATCCGTGCCTaGTCGGCTCACTTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPVTIRA*SAHLCR
Trigger: CCTGCACAAGTGAGCCGAGCAGGCACGGATTGTGAC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGGCCCACGGGCGTGAGTaGATGCATGCGTTTGTGACA +
Preference number: 2 (lower is better)
Translates to: CDWESCPAACVPSVISSEAHGRE*MHAFVT
Trigger: TGTCACAAACGCATGCATGCACTCACGCCCGTGGGC...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCATGCACAGATAGGGGCTaGAAACCCTACGTCGGTCCC +
Preference number: 2 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQACTDRG*KPYVGP
Trigger: GGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCA...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGAATGGGTGCCAGGCATaGTACGCAGCACACAAACTG +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQNGCQA*YAAHKL
Trigger: CAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGTGGATTTTGACAGACTaGGAACTCGGGGGACAGGAG +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQWILTD*ELGGQE
Trigger: CTCCTGTCCCCCGAGTTCCCAGTCTGTCAAAATCCA...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTGCTTGCCTGGAGTCCTaGCAGAGGAGTGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCACLES*QRSATH
Trigger: GTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAAGC...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGAACTCAAAATGCACTTaGACCTGGAAGCGGCAACCC +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQNSKCT*TWKRQP
Trigger: GGGTTGCCGCTTCCAGGTTCAAGTGCATTTTGAGTT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCGGTGCTGGTTACCTATaGCTGGGAGGCAACTGTCCC +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTGAGYL*LGGNCP
Trigger: GGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACC...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGTTGGAGGACAGCATCTaGACAGATAGGGGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQLEDSI*TDRGWK
Trigger: TTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAA...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACCAGCACGCAAGGGCTaGTCTGAAGAAATACGGGAG +
Preference number: 2 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAPARKG*SEEIRE
Trigger: CTCCCGTATTTCTTCAGAGCAGCCCTTGCGTGCTGG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGAGCTCTGCATATCAGTaGTTCTCGGCGGAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: CDWESCPAACVPSVISSESSAYQ*FSAELW
Trigger: CCACAGCTCCGCCGAGAAGCACTGATATGCAGAGCT...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTAGGGTGACCAGTCAGTaGCACCGGGTTGGCATTGGT +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCRVTSQ*HRVGIG
Trigger: ACCAATGCCAACCCGGTGGCACTGACTGGTCACCCT...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCTGGGAGGCAACAGTGTaGTCTCAGGGTGCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPWEATV*SQGAGR
Trigger: CCGCCCAGCACCCTGAGACCACACTGTTGCCTCCCA...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAAAGCGAATCAAGCCCTaGCGCGGTCCAGCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAKRIKP*RGPAPA
Trigger: GGCAGGGGCTGGACCGCGCCAGGGCTTGATTCGCTT...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGGTCTGACCCTTTTCTaGGCCCATCGCTCTTTGACC +
Preference number: 2 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPGLTLF*AHRSLT
Trigger: GGTCAAAGAGCGATGGGCCCAGAAAAGGGTCAGACC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAGGGCTAGACCCAGCGTaGGGGTCTGCTAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAGLDPA*GSASSQ
Trigger: CTGGCTGCTAGCAGACCCCCACGCTGGGTCTAGCCC...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATCCCCATGGGATTGGGTaGGCTAGACCCAGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADPHGIG*ARPSVG
Trigger: CCCCACGCTGGGTCTAGCCCACCCAATCCCATGGGG...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTTGTCACGTCACTTTCTaGACTGCCCACGCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSCHVTF*TAHAAS
Trigger: TGAAGCTGCGTGGGCAGTCCAGAAAGTGACGTGACA...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGTGAGGCTGGCAAGATaGGCTCAACAGGTCACAACC +
Preference number: 2 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPVRLAR*AQQVTT
Trigger: GGTTGTGACCTGTTGAGCCCATCTTGCCAGCCTCAC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGCTCATCGAGCAAACATaGCCTCCTTGCAACACCTCA +
Preference number: 2 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMLIEQT*PPCNTS
Trigger: TGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAG...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATGGAAAGGTCCAGGCCTaGGAACCTCCCGGCCACACG +
Preference number: 2 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNGKVQA*EPPGHT
Trigger: CGTGTGGCCGGGAGGTTCTCAGGCCTGGACCTTTCC...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR-3UTR TCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGTGTGCTGCTGGCTCTaGCCATACTCTTTTGGAAAT +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQVCCWL*PYSFGN
Trigger: ATTTCCAAAAGAGTATGGTCAGAGCCAGCAGCACAC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCCCCCACCAGGGGCTTaGTCACACCGGCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNPPPGA*SHRPHP
Trigger: AGGATGAGGCCGGTGTGACCAAGCCCCTGGTGGGGG...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAGGTGTAAGCCCCTCCTaGGCGCGAGTTCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAGVSPS*ARVQAG
Trigger: ACCAGCCTGAACTCGCGCCCAGGAGGGGCTTACACC...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGTTACCTATGCCTaGGAGGCAACTGTCCCCACA +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCLVTYA*EATVPT
Trigger: TGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCTCCAAGCACAGGTGCTaGTTACCTATGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTSKHRC*LPMPGR
Trigger: CCTCCCAGGCATAGGTAACCAGCACCTGTGCTTGGA...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCAGATGCTGCCACAGTTaGCTGCCCAGAATCAGCACC +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTRCCHS*LPRIST
Trigger: GGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp AAGACCAGAAAAAGAAGGAAGCTGGGAATGAAACTCAAAATGCACTaGAACCTGGAAGCGGCAACCCTCAGCTCTGCGCGGCCGAGCCTC +
Preference number: 2 (lower is better)
Translates to: KTRKRRKLGMKLKMH*NLEAATLSSARPSL
Trigger: GAGGCTCGGCCGCGCAGAGCTGAGGGTTGCCGCTTCCAGGTTCAAGTGCATTTTGAGTTTCATTCCCAGCTTCCTTCTTTTTCTGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTACAGGTCACAACCAATaGTCATGCTGGCAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCTGHNQ*SCWQAS
Trigger: GCTGGCTTGCCAGCATGATCATTGGTTGTGACCTGT...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCAAACATGGCCTCCTTaGAACACCTCAAATGGGTGC +
Preference number: 2 (lower is better)
Translates to: CDWESCPAACVPSVISSEQTWPP*NTSNGC
Trigger: GCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGGCAAACTGTACCCGTaGCTGTGCGCTGGGAGAACA +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPGKLYP*LCAGRT
Trigger: TGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTCTACGTCGGTCCCTGTaGACTGTCACGTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTLRRSL*TVTSLS
Trigger: AGAAAGTGACGTGACAGTCCACAGGGACCGACGTAG...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGCATTTGCCCTGGGCCTaGGAGACCAGGTTGGATTTT +
Preference number: 2 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLHLPWA*ETRLDF
Trigger: AAAATCCAACCTGGTCTCCCAGGCCCAGGGCAAATG...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCATTCCTTCGAAAAGATaGGACCCGCACCCCCGCCAC +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPIPSKR*DPHPRH
Trigger: GTGGCGGGGGTGCGGGTCCCATCTTTTCGAAGGAAT...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTTCAGTGCCACCGGGTTaGCATTGGTGTTACAGACAG +
Preference number: 2 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCSVPPG*HWCYRQ
Trigger: CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGA...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp AAATTTGTCTCCTGCTCCAGTAGATGCTACAGCATCACCCAATGGTaGACGCATCGCTCTGGTCACAATCCGTGCCTGCTCGGCTCACTT +
Preference number: 2 (lower is better)
Translates to: KFVSCSSRCYSITQW*THRSGHNPCLLGSL
Trigger: AAGTGAGCCGAGCAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCATCTACTGGAGCAGGAGACAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 90 bp GGTAGATTCCGTTGTGCAGCCCAGGCCGAGAAGCATCGCGGAGTCTaGTCATTCAGCCTGAAAATAGCATCAAGTTCCCATCCACTCGAA +
Preference number: 2 (lower is better)
Translates to: GRFRCAAQAEKHRGV*SFSLKIASSSHPLE
Trigger: TTCGAGTGGATGGGAACTTGATGCTATTTTCAGGCTGAATGACAAGACTCCGCGATGCTTCTCGGCCTGGGCTGCACAACGGAATCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCATCTCCATCTGGGTCTaGCCCTTTTCTGGGCCCATC +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPISIWV*PFSGPI
Trigger: GATGGGCCCAGAAAAGGGTCAGACCCAGATGGAGAT...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAGCCTCCAAGCACAGGTaGTGGTTACCTATGCCTGGG +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAASKHR*WLPMPG
Trigger: CCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGC...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCATCAGATCCACCCAGATaGCAACTCTGTCGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITASDPPR*QLCRAP
Trigger: AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGA...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATGCTGCCACAGTTGGCTaGCCAGAATCAGCACCAGCT +
Preference number: 2 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADAATVG*PESAPA
Trigger: AGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGC...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCTACAGCATCACCCAATaGTTGACGCATCGCTCTGGT +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTYSITQ*LTHRSG
Trigger: ACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTA...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATCCCCACAGCCTGGCCTaGTTGACACGAAAGACTGAC +
Preference number: 2 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADPHSLA*LTRKTD
Trigger: GTCAGTCTTTCGTGTCAACCAGGCCAGGCTGTGGGG...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGTGCGGTGTCTACGGATaGACCAAGAAAACCTACGCA +
Preference number: 2 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLCGVYG*TKKTYA
Trigger: TGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCA...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAACGCAAGGGCTGCTCTaGAGAAATACGGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITATQGLL*RNTGGP
Trigger: AGGACCTCCCGTATTTCTTCAGAGCAGCCCTTGCGT...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCACAAACTGTGTCACTTaGTACAGCGGCCCCATGAGG +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPTNCVT*YSGPMR
Trigger: CCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGT...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAAGGCAGAAAGCACAGTaGCCAGCAGCTAGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: VPSLCCCCCCCYFGNITARQKAQ*PAASSV
Trigger: CACACTGCTAGCTGCTGGGCACTGTGCTTTCTGCCT...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCCAACTCATTTGCAACTaGTATGTCTCCCCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTQLICN*YVSPPS
Trigger: ACTTGGAGGGGAGACATATCAGTTGCAAATGAGTTG...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGTTTCACCAAGCACTTTaGGCACAGTGGAACTTCAGA +
Preference number: 2 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLFHQAL*AQWNFR
Trigger: TCTGAAGTTCCACTGTGCTCAAAGTGCTTGGTGAAA...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGCTGACCATACTCTTTTaGAAATTGAGAAGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQLTILF*KLRRKA
Trigger: TGCTTTCCTTCTCAATTTCCAAAAGAGTATGGTCAG...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCTCTAAATTTGTCTCCTaGTCCAGTAGATGCTACAGC +
Preference number: 2 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTSKFVS*SSRCYS
Trigger: GCTGTAGCATCTACTGGAGCAGGAGACAAATTTAGA...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR TCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATGGAGACACAGGGCCCTaGTGGGAAAGGTCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNGDTGP*WERSRP
Trigger: AGGCCTGGACCTTTCCCATCAGGGCCCTGTGTCTCC...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCTGTTGTTGTTGTTGCTaGTATTTTGGCAACATCACG +
Preference number: 2 (lower is better)
Translates to: SKDTMDVYFARCDWESCPCCCCC*YFGNIT
Trigger: CGTGATGTTGCCAAAATAGCAGCAACAACAACAACA...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATAACCGGTACAGCTCCTaGCCCACAAAATCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNNRYSS*PTKSSQ
Trigger: CTGGGAGGATTTTGTGGGCCAGGAGCTGTACCGGTT...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR CCA 72 bp GAGAGGACGGGCTCACCCAGCCGTGGGGCCGCGGGCTaGACATCCAGTGGGAGTGGGAAGCCGCCGTCTCAA +
Preference number: 3 (lower is better)
Translates to: ERTGSPSRGAAG*TSSGSGKPPSQ
Trigger: TTGAGACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAGCCCGTCCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CTCACCCAGCCGTGGGGCCGCGGGCTGGACATCCAGTaGGAGTGGGAAGCCGCCGTCTCAAGGCAGAATTCC +
Preference number: 3 (lower is better)
Translates to: LTQPWGRGLDIQ*EWEAAVSRQNS
Trigger: GGAATTCTGCCTTGAGACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CGGGAGGTCCTCACTGGAGGGTCTGGGGCCACACGGTaGGTCCGGAGACAGAAACGAGGAGAGGACGGGCTC +
Preference number: 3 (lower is better)
Translates to: REVLTGGSGATR*VRRQKRGEDGL
Trigger: GAGCCCGTCCTCTCCTCGTTTCTGTCTCCGGACCCACCGTGTGGCCCCAGACCCTCCAGTGAGGACCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp AGACAGAAACGAGGAGAGGACGGGCTCACCCAGCCGTaGGGCCGCGGGCTGGACATCCAGTGGGAGTGGGAA +
Preference number: 3 (lower is better)
Translates to: RQKRGEDGLTQP*GRGLDIQWEWE
Trigger: TTCCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACGGCTGGGTGAGCCCGTCCTCTCCTCGTTTCTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGCCTGCTCGGCTCACTaGTGCAGGTGTAAGCCCCTC +
Preference number: 3 (lower is better)
Translates to: TAARRCRGLPGVLAEECHACSAH*CRCKPL
Trigger: GAGGGGCTTACACCTGCACAAGTGAGCCGAGCAGGC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp ACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATaGTGGCACCTCGGCTGCGGCCAATGGTGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: TEAAPCGCSTGR*WHLGCGQWCGW
Trigger: CCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR GCA 72 bp GCTCTGGTCACAATCCGTGCCTGCTCGGCTCACTTGTaGAGGTGTAAGCCCCTCCTGGGCGCGAGTTCAGGC +
Preference number: 3 (lower is better)
Translates to: ALVTIRACSAHL*RCKPLLGASSG
Trigger: GCCTGAACTCGCGCCCAGGAGGGGCTTACACCTGCACAAGTGAGCCGAGCAGGCACGGATTGTGACCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp TGCAGGTGTAAGCCCCTCCTGGGCGCGAGTTCAGGCTaGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCG +
Preference number: 3 (lower is better)
Translates to: CRCKPLLGASSG*SKAASESSPGA
Trigger: CGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCCCAGGAGGGGCTTACACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CCTGCTCGGCTCACTTGTGCAGGTGTAAGCCCCTCCTaGGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCG +
Preference number: 3 (lower is better)
Translates to: PARLTCAGVSPS*ARVQAGQRQQA
Trigger: CGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCCCAGGAGGGGCTTACACCTGCACAAGTGAGCCGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GGGCTAGACCCAGCGTGGGGGTCTGCTAGCAGCCAGTaGCATCTCCATCTGGGTCTGACCCTTTTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GLDPAWGSASSQ*HLHLGLTLFWA
Trigger: GGCCCAGAAAAGGGTCAGACCCAGATGGAGATGCCACTGGCTGCTAGCAGACCCCCACGCTGGGTCTAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp TGTCACTTGATACAGCGGCCCCATGAGGCGAGGAGCTaGGAGGTCACAGAACATGCCCCAGGGCACCCAGGG +
Preference number: 3 (lower is better)
Translates to: CHLIQRPHEARS*EVTEHAPGHPG
Trigger: CCCTGGGTGCCCTGGGGCATGTTCTGTGACCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTCCTGCCATCTGGGGCTaGGCCAGCAGAGGGCGCCCC +
Preference number: 3 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTPAIWG*ASRGRP
Trigger: GGGGCGCCCTCTGCTGGCCAAGCCCCAGATGGCAGG...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CCTACGTCGGTCCCTGTGGACTGTCACGTCACTTTCTaGACTGCCCACGCAGCTTCACCCAGCAGCACTCGC +
Preference number: 3 (lower is better)
Translates to: PTSVPVDCHVTF*TAHAASPSSTR
Trigger: GCGAGTGCTGCTGGGTGAAGCTGCGTGGGCAGTCCAGAAAGTGACGTGACAGTCCACAGGGACCGACGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTaGCAGAGGAGTGCCACTCACTTTTGCCTAGGGTCC +
Preference number: 3 (lower is better)
Translates to: RQQEDAGACLES*QRSATHFCLGS
Trigger: GGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GTCTGGGACGGCAGCAAGAAGATGCCGGGGCTTGCCTaGAGTCCTGGCAGAGGAGTGCCACTCACTTTTGCC +
Preference number: 3 (lower is better)
Translates to: VWDGSKKMPGLA*SPGRGVPLTFA
Trigger: GGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGTCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp GCCAGGCATGGTACGCAGCACACAAACTGTGTCACTTaGTACAGCGGCCCCATGAGGCGAGGAGCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ARHGTQHTNCVT*YSGPMRRGAGR
Trigger: CCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp GCCACCGGGTTGGCATTGGTGTTACAGACAGGCCTCTaGAGACAAACCGAGCACCCCAGCGGCCCCTCAAAC +
Preference number: 3 (lower is better)
Translates to: ATGLALVLQTGL*RQTEHPSGPSN
Trigger: GTTTGAGGGGCCGCTGGGGTGCTCGGTTTGTCTTCAGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp TCCCTGGGGCAAGGTCAAAGGTGGACCCGCCCACTGTaGGTCAATTCCTTCGAAAAGATGGGACCCGCACCC +
Preference number: 3 (lower is better)
Translates to: SLGQGQRWTRPL*VNSFEKMGPAP
Trigger: GGGTGCGGGTCCCATCTTTTCGAAGGAATTGACCCACAGTGGGCGGGTCCACCTTTGACCTTGCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp GAGGCTGGCAAGATGGGCTCAACAGGTCACAACCAATaGTCATGCTGGCAAGCCAGCAGTGGCAGGCGCACG +
Preference number: 3 (lower is better)
Translates to: EAGKMGSTGHNQ*SCWQASSGRRT
Trigger: CGTGCGCCTGCCACTGCTGGCTTGCCAGCATGATCATTGGTTGTGACCTGTTGAGCCCATCTTGCCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp CCAGAGAGGGACCGTGATGGTTTGGAGGACAGCATCTaGACAGATAGGGGCTGGAAACCCTACGTCGGTCCC +
Preference number: 3 (lower is better)
Translates to: PERDRDGLEDSI*TDRGWKPYVGP
Trigger: GGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CTACTACAGGGGCAAACTGTACCCGTGCCTGTGCGCTaGGAGAACAAGGTCAGCGCCCAAGGGTGTGCAAAG +
Preference number: 3 (lower is better)
Translates to: LLQGQTVPVPVR*ENKVSAQGCAK
Trigger: CTTTGCACACCCTTGGGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGTGGGCCCATCGCTCTTaGACCATTTCCCCACCTGGG +
Preference number: 3 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSWAHRS*TISPPG
Trigger: CCCAGGTGGGGAAATGGTCAAAGAGCGATGGGCCCA...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGTTGTTGCTGCTATTTaGGCAACATCACGGCAGAAC +
Preference number: 3 (lower is better)
Translates to: TAARRCRGLPGVLAEECHVVAAI*ATSRQN
Trigger: GTTCTGCCGTGATGTTGCCAAAATAGCAGCAACAAC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp ACAGTTGGCTGCCCAGAATCAGCACCAGCTACTTGCTaGGGCCCAGAAGCACCACTTGGCTCAGATCCACCC +
Preference number: 3 (lower is better)
Translates to: TVGCPESAPATC*GPEAPLGSDPP
Trigger: GGGTGGATCTGAGCCAAGTGGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGCTGATTCTGGGCAGCCAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp GCGCGGCCGAGCCTCAGCAAGAGTTCGTTTTGTGCCTaGGTTACTACTACAGGGGCAAACTGTACCCGTGCC +
Preference number: 3 (lower is better)
Translates to: ARPSLSKSSFCA*VTTTGANCTRA
Trigger: GGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp AGTTACTACTACAGGGGCAAACTGTACCCGTGCCTGTaGGCTGGGAGAACAAGGTCAGCGCCCAAGGGTGTG +
Preference number: 3 (lower is better)
Translates to: SYYYRGKLYPCL*AGRTRSAPKGV
Trigger: CACACCCTTGGGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp TGCCTGAGTTACTACTACAGGGGCAAACTGTACCCGTaGCTGTGCGCTGGGAGAACAAGGTCAGCGCCCAAG +
Preference number: 3 (lower is better)
Translates to: CLSYYYRGKLYP*LCAGRTRSAPK
Trigger: CTTGGGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp AATGCACTTGAACCTGGAAGCGGCAACCCTCAGCTCTaGGCGGCCGAGCCTCAGCAAGAGTTCGTTTTGTGC +
Preference number: 3 (lower is better)
Translates to: NALEPGSGNPQL*AAEPQQEFVLC
Trigger: GCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAGCTGAGGGTTGCCGCTTCCAGGTTCAAGTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp AGCCAGTGGCATCTCCATCTGGGTCTGACCCTTTTCTaGGCCCATCGCTCTTTGACCATTTCCCCACCTGGG +
Preference number: 3 (lower is better)
Translates to: SQWHLHLGLTLF*AHRSLTISPPG
Trigger: CCCAGGTGGGGAAATGGTCAAAGAGCGATGGGCCCAGAAAAGGGTCAGACCCAGATGGAGATGCCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATGCCCCCACCAGGGGCTaGGTCACACCGGCCTCATCC +
Preference number: 3 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNAPTRG*VTPASS
Trigger: GGATGAGGCCGGTGTGACCAAGCCCCTGGTGGGGGC...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR-3UTR CAA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGCCCAGCCTTTGTTGTaGTTGTTGTTGCTGCTATTT +
Preference number: 3 (lower is better)
Translates to: TAARRCRGLPGVLAEECHAQPLL*LLLLLF
Trigger: AAATAGCAGCAACAACAACAACAACAAAGGCTGGGC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp CCTGCTCCAGTAGATGCTACAGCATCACCCAATGGTTaGCGCATCGCTCTGGTCACAATCCGTGCCTGCTCG +
Preference number: 3 (lower is better)
Translates to: PAPVDATASPNG*RIALVTIRACS
Trigger: CGAGCAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCATCTACTGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp CACGTGGAAACAAAGCTGCTTAGCTCTGCATATCAGTaGTTCTCGGCGGAGCTGTGGCTGATGGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: HVETKLLSSAYQ*FSAELWLMGSW
Trigger: CCAGGAGCCCATCAGCCACAGCTCCGCCGAGAAGCACTGATATGCAGAGCTAAGCAGCTTTGTTTCCACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp GACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTaGGGTGTCTACGGATGGACCAAGAAAACCTACGCA +
Preference number: 3 (lower is better)
Translates to: DSGASREDPLQE*GVYGWTKKTYA
Trigger: TGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp CTCTGCGCGGCCGAGCCTCAGCAAGAGTTCGTTTTGTaGCTGAGTTACTACTACAGGGGCAAACTGTACCCG +
Preference number: 3 (lower is better)
Translates to: LCAAEPQQEFVL*LSYYYRGKLYP
Trigger: CGGGTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GATGGTTTGGAGGACAGCATCTGCACAGATAGGGGCTaGAAACCCTACGTCGGTCCCTGTGGACTGTCACGT +
Preference number: 3 (lower is better)
Translates to: DGLEDSICTDRG*KPYVGPCGLSR
Trigger: ACGTGACAGTCCACAGGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAAACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTaGTGTTACAGACAGGCCTCTGAAGACAAACCGAGC +
Preference number: 3 (lower is better)
Translates to: LQGDQSVPPGWH*CYRQASEDKPS
Trigger: GCTCGGTTTGTCTTCAGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CGTGGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTaGCATTGGTGTTACAGACAGGCCTCTGAAGACAAA +
Preference number: 3 (lower is better)
Translates to: RGLQGDQSVPPG*HWCYRQASEDK
Trigger: TTTGTCTTCAGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTGCCCAGAAGCACCACTaGGCTCAGATCCACCCAGAT +
Preference number: 3 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTAQKHH*AQIHPD
Trigger: ATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGGGC...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCATCAGCACCAGCTACTaGCTGAGGCCCAGAAGCACC +
Preference number: 3 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTISTSY*LRPRST
Trigger: GGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGCTGAT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGCACAAACTGTGTCACTaGATACAGCGGCCCCATGAG +
Preference number: 3 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSHKLCH*IQRPHE
Trigger: CTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTG...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp CTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCTaGATGCGTTCCCTCTGTAATTTCCTCAGAGCTCAC +
Preference number: 3 (lower is better)
Translates to: LLCTLRLGELSR*MRSLCNFLRAH
Trigger: GTGAGCTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp ATGCTACAGCATCACCCAATGGTTGACGCATCGCTCTaGTCACAATCCGTGCCTGCTCGGCTCACTTGTGCA +
Preference number: 3 (lower is better)
Translates to: MLQHHPMVDASL*SQSVPARLTCA
Trigger: TGCACAAGTGAGCCGAGCAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GTCTCCTGCTCCAGTAGATGCTACAGCATCACCCAATaGTTGACGCATCGCTCTGGTCACAATCCGTGCCTG +
Preference number: 3 (lower is better)
Translates to: VSCSSRCYSITQ*LTHRSGHNPCL
Trigger: CAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCATCTACTGGAGCAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GTTCGCCTCCAAGCACAGGTGCTGGTTACCTATGCCTaGGAGGCAACTGTCCCCACAACTCATTTGCAACTG +
Preference number: 3 (lower is better)
Translates to: VRLQAQVLVTYA*EATVPTTHLQL
Trigger: CAGTTGCAAATGAGTTGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGCGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GTGGGAAGCCGCCGTCTCAAGGCAGAATTCCCTCTCTaGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGC +
Preference number: 3 (lower is better)
Translates to: VGSRRLKAEFPL*DTSGFALKAFS
Trigger: GCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTGCCTTGAGACGGCGGCTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTaGGACGGCAGCAAGAAGATGCCGGGGCTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: PSKSVHLVTSVV*DGSKKMPGLAW
Trigger: CCAGGCAAGCCCCGGCATCTTCTTGCTGCCGTCCCAGACAACAGAAGTTACCAGATGAACAGACTTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCAGCATCACCCAATGGTaGACGCATCGCTCTGGTCAC +
Preference number: 3 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTSITQW*THRSGH
Trigger: GTGACCAGAGCGATGCGTCAACCATTGGGTGATGCT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGCCTGGGAGACCAGGTaGGATTTTGACAGACTGGGA +
Preference number: 3 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLAWETR*DFDRLG
Trigger: TCCCAGTCTGTCAAAATCCAACCTGGTCTCCCAGGC...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCCACCGGGTTGGCATaGGTGTTACAGACAGGCCTC +
Preference number: 3 (lower is better)
Translates to: SKDTMDVYFARCDWESCPATGLA*VLQTGL
Trigger: GAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp TCGATGAGATCACTGGGCCCCACAGCCTGGCCTGGTTaGCACGAAAGACTGACTAGCACACACGGTAATTCT +
Preference number: 3 (lower is better)
Translates to: SMRSLGPTAWPG*HERLTSTHGNS
Trigger: AGAATTACCGTGTGTGCTAGTCAGTCTTTCGTGTCAACCAGGCCAGGCTGTGGGGCCCAGTGATCTCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp GAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTaGCAGGCATGGTACGCAGCACACAAACTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: EQTWPPCNTSNG*QAWYAAHKLCH
Trigger: GTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp CCCACGCTGGAGTGCAGTGATGTAATCTCGGCTCACTaGAACCTTGACCTCAAGGTTAAGCTCCAGCGATCT +
Preference number: 3 (lower is better)
Translates to: PTLECSDVISAH*NLDLKVKLQRS
Trigger: AGATCGCTGGAGCTTAACCTTGAGGTCAAGGTTGCAGTGAGCCGAGATTACATCACTGCACTCCAGCGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp TTTGCACGCTGCGATTGGGAGAGCTGTCCCGCTGCATaGGTTCCCTCTGTAATTTCCTCAGAGCTCACATAC +
Preference number: 3 (lower is better)
Translates to: FARCDWESCPAA*VPSVISSELTY
Trigger: GTATGTGAGCTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATaGGTGCCAGGCATGGTACGCAGCACACAAACTGTG +
Preference number: 3 (lower is better)
Translates to: HRANMASLQHLK*VPGMVRSTQTV
Trigger: CACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp GGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTaGGCTCGGCAGGTGTTGTGGTTCATGTCTGTAATC +
Preference number: 3 (lower is better)
Translates to: GSCHCPCWIQNT*ARQVLWFMSVI
Trigger: GATTACAGACATGAACCACAACACCTGCCGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp CGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATaGACCAAGAAAACCTACGCAGGATCCACGTGGAAA +
Preference number: 3 (lower is better)
Translates to: REDPLQECGVYG*TKKTYAGSTWK
Trigger: TTTCCACGTGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGAGTCCCTCTCTAAATTaGTCTCCTGCTCCAGTAGAT +
Preference number: 3 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQSPSLN*SPAPVD
Trigger: ATCTACTGGAGCAGGAGACAAATTTAGAGAGGGACT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCCAGGTGCCCAGCCTTaGTTGTTGTTGTTGTTGCTG +
Preference number: 3 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCPGAQP*LLLLLL
Trigger: CAGCAACAACAACAACAACAAAGGCTGGGCACCTGG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp TGGGCCCCACAGCCTGGCCTGGTTGACACGAAAGACTaGCTAGCACACACGGTAATTCTCCAGAAATATCCA +
Preference number: 3 (lower is better)
Translates to: WAPQPGLVDTKD*LAHTVILQKYP
Trigger: TGGATATTTCTGGAGAATTACCGTGTGTGCTAGTCAGTCTTTCGTGTCAACCAGGCCAGGCTGTGGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp TTTTTGTTTGTTGGGACAGGGTCTTGCCATTGCCCGTaGTGGATTCAAAACACCTGGGCTCGGCAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: FLFVGTGSCHCP*WIQNTWARQVL
Trigger: CAACACCTGCCGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACAAACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp AAAACAGAGACAGTGGGGCATCCCGAGAAGATCCTCTaGAGGAGTGCGGTGTCTACGGATGGACCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: KTETVGHPEKIL*RSAVSTDGPRK
Trigger: TTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp TGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCATaGTACGCAGCACACAAACTGTGTCACTTGATACAG +
Preference number: 3 (lower is better)
Translates to: WPPCNTSNGCQA*YAAHKLCHLIQ
Trigger: CTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp AAAGACACTATGGATGTCTACTTTGCACGCTGCGATTaGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTA +
Preference number: 3 (lower is better)
Translates to: KDTMDVYFARCD*ESCPAACVPSV
Trigger: TACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCGTCCCCACAACTCATTaGCAACTGATATGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTVPTTH*QLICLP
Trigger: GGGGAGACATATCAGTTGCAAATGAGTTGTGGGGAC...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGGACCGTGATGGTTaGGAGGACAGCATCTGCACA +
Preference number: 3 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADRDRDG*EDSICT
Trigger: TGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCT...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp AGGGCACCATTTCCACCCATGGGTGAAAAAGAGGCTTaGGGAAGACAACAGGTTCTTCACCTGCATCTGTGG +
Preference number: 3 (lower is better)
Translates to: RAPFPPMGEKEA*GRQQVLHLHLW
Trigger: CCACAGATGCAGGTGAAGAACCTGTTGTCTTCCTCAAGCCTCTTTTTCACCCATGGGTGGAAATGGTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR GCA 72 bp TTTTCAAAAGACACTATGGATGTCTACTTTGCACGCTaGGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCC +
Preference number: 3 (lower is better)
Translates to: FSKDTMDVYFAR*DWESCPAACVP
Trigger: GGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGAAGCATCGCGGAGTCTaGTCATTCAGCCTGAAAATA +
Preference number: 3 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLKHRGV*SFSLKI
Trigger: TATTTTCAGGCTGAATGACAAGACTCCGCGATGCTT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCAGCAAGAGTTCGTTTaGTGCCTGAGTTACTACTAC +
Preference number: 3 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCQQEFV*CLSYYY
Trigger: GTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CCA 72 bp TACGGATGGACCAAGAAAACCTACGCAGGATCCACGTaGAAACAAAGCTGCTTAGCTCTGCATATCAGTGCT +
Preference number: 3 (lower is better)
Translates to: YGWTKKTYAGST*KQSCLALHISA
Trigger: AGCACTGATATGCAGAGCTAAGCAGCTTTGTTTCCACGTGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR-3UTR CAA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAAAGGGACAAGCCCATTaGCAAAACCCCTTTAATCAG +
Preference number: 3 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAKGQAH*QNPFNQ
Trigger: CTGATTAAAGGGGTTTTGCAAATGGGCTTGTCCCTT...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp TGTAAAATCACCTTCGCTAACTTTCACCAAGCACTTTaGGCACAGTGGAACTTCAGAAGCACAACCAGCCTA +
Preference number: 3 (lower is better)
Translates to: CKITFANFHQAL*AQWNFRSTTSL
Trigger: TAGGCTGGTTGTGCTTCTGAAGTTCCACTGTGCTCAAAGTGCTTGGTGAAAGTTAGCGAAGGTGATTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR TCA 72 bp TTTCCTCAGAGCTCACATACGTACCTCTCTCACGAGTaGACTCAGATTTTCCATTGTTTTGCTTTATTCTAT +
Preference number: 3 (lower is better)
Translates to: FPQSSHTYLSHE*TQIFHCFALFY
Trigger: ATAGAATAAAGCAAAACAATGGAAAATCTGAGTTCACTCGTGAGAGAGGTACGTATGTGAGCTCTGAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCGGGCTGTGCCGCAGCTaGCACTCGGCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGHTSRPLRGEHSPPSPPGLCRS*HSASSS
Trigger: GGAGCTGCTGGCCGAGTGGCAGCTGCGGCACAGCCC...GGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GGCCTGAGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCGCCAGGGCTCACCTGTaGCCCGCAAGAGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLRTSRPHVPATKGRTLTARAHL*PARAAG
Trigger: CCCGGCGGCTCTTGCGGGGCACAGGTGAGCCCTGGC...GGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCTCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp CCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCACCTCCCGCTCTCTCTaGTGCAGCTCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGHTSRPLRGEHSPPSPPTSRSL*CSSSPS
Trigger: GGAGGGGCTGGAGCTGCAGCAGAGAGAGCGGGAGGT...GGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTCCGGGGCCGGCTGCTCCTaGACCGAAGCTGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: ATKGRTLTTQSAQDPLTSGAGCS*TEAAPC
Trigger: GCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCC...GGAGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp CCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCGCAGGCCACCCACCCTaGGTGTGCACTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PGHTSRPLRGEHSPPSPPAGHPP*VCTGCH
Trigger: ATGGCAGCCAGTGCACACCCAGGGTGGGTGGCCTGC...GGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp GCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTCCAGCAACCCGCGCCTGTaGGGAGCTCCAGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ATKGRTLTTQSAQDPLTSSNPRL*GAPGLC
Trigger: GCACAGGCCTGGAGCTCCTCACAGGCGCGGGTTGCT...GGAGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp CCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCGGAGACACAGGGCCCTaGTGGGAAAGGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGHTSRPLRGEHSPPSPPGDTGP*WERSRP
Trigger: AGGCCTGGACCTTTCCCATCAGGGCCCTGTGTCTCC...GGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp CAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTACCTCCCGCTCTCTCTaGTGCAGCTCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QSSRAGAGCSCTEAAPCGTSRSL*CSSSPS
Trigger: GGAGGGGCTGGAGCTGCAGCAGAGAGAGCGGGAGGT...ACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp GGCCTGAGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCCGAGCAGGGGCCGGCTaGTCCTGCACCGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLRTSRPHVPATKGRTLTRAGAG*SCTEAA
Trigger: TGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCG...GGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTCCCGAACTGGCCCCCGATaGGCTTCAGGGCGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: ATKGRTLTTQSAQDPLTSRTGPR*ASGRSA
Trigger: GGCGCTACGCCCTGAAGCGCATCGGGGGCCAGTTCG...GGAGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GGCCTGAGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCCGTACAGGCGGAGGCTaGGCCAGGCGGAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: GLRTSRPHVPATKGRTLTRTGGG*ARRSGQ
Trigger: TTGTCCGCTCCGCCTGGCCCAGCCTCCGCCTGTACG...GGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp CCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCATCCCGCGAAGCATGTaGTCCCGCTGTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: PGHTSRPLRGEHSPPSPPIPRSM*SRCATA
Trigger: GGCAGTGGCACAGCGGGACCACATGCTTCGCGGGAT...GGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp GGCCTGAGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCGGAAAGGTCCAGGCCTaGGAACCTCCCGGCCACACG +
Preference number: 4 (lower is better)
Translates to: GLRTSRPHVPATKGRTLTGKVQA*EPPGHT
Trigger: CGTGTGGCCGGGAGGTTCTCAGGCCTGGACCTTTCC...GGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCTCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp AAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCTGGCCGTGCTCTGGGTaGCCTCGGGCCGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: KLHRAVVVLGDDGTSAAAWPCSG*PRAARV
Trigger: CACTCTGGCGGCCCGAGGGCACCCAGAGCACGGCCA...GGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp AAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCGGGGCCGGCTGCTCCTaGACCGAAGCTGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: KLHRAVVVLGDDGTSAAAGAGCS*TEAAPC
Trigger: GCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCC...GGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp CTTGAGGATGAGGTTCCTGCGGAGGGCGGGGTGCAAAGGCTGAGGGGCGGGTACTGCCATCCAGGGGGCTaGCACACGGCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LEDEVPAEGGVQRLRGGYCHPGG*HTAGSA
Trigger: CGCTGAACCAGCCGTGTGGCAGCCCCCTGGATGGCA...GTACCCGCCCCTCAGCCTTTGCACCCCGCCCTCCGCAGGAACCTCATCCTCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTTGGGTGTGCACTGGCTaGCATCCAGGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPWVCTG*HPGGCH
Trigger: GTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCA...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GGCCTGAGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCCACCCACCCTGGGTGTaGACTGGCTGCCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLRTSRPHVPATKGRTLTHPPWV*TGCHPG
Trigger: CCCTGGATGGCAGCCAGTGCACACCCAGGGTGGGTG...GGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCTCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGCCAGGCACAGGTGGATaGGGGGTGCAGCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: DKVPEQGPAAPAPKLHRAPGTGG*GVQQVL
Trigger: CAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGG...CGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTACCCTGGGTGTGCACTaGCTGCCATCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPTLGVH*LPSRGL
Trigger: CAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGT...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGCACTGGCTCTGCTCCTaGATGAGCCCTGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRHWLCS*MSPGPL
Trigger: CAGGGGACCAGGGCTCATCCAGGAGCAGAGCCAGTG...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTGGTGCGGCTGGGCATaGTGGCCAGGATGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQWCGWA*WPGCGV
Trigger: CACTCCGCATCCTGGCCAGCATGCCCAGCCGCACCA...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTGGGCATCGAGCAGGGGCCGGCTaGTCCTGCACCGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VVLGDDGTSAAANGAAGHRAGAG*SCTEAA
Trigger: TGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCG...ATGCCCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGGAGACCCTGGGGCCTaGCGCCTCCAGGTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQGDPGA*RLQVAH
Trigger: GTGCGCCACCTGGAGGCGGCAGGCCCCAGGGTCTCC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTGCGCGGTCCAGCCCCTaGCATCTGGGGCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPARSSP*HLGLGQ
Trigger: CTGGCCAAGCCCCAGATGGCAGGGGCTGGACCGCGC...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTCCCAAGCGCAGCTCCTaGAGGCCTGGAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPPKRSS*RPGALG
Trigger: GCCCAGGGCTCCAGGCCTGCAGGAGCTGCGCTTGGG...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGATCCTGGGCCGTGCACTaGCTCTGCTCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: QGPAAPAPKLHRAVVVLGSWAVH*LCSWMS
Trigger: GCTCATCCAGGAGCAGAGCCAGTGCACGGCCCAGGA...TCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGCCAGGATGCGGAGTGTaGCCGTGCTCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQPGCGV*PCSGCP
Trigger: AGGGCACCCAGAGCACGGCCACACTCCGCATCCTGG...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTGCGGCTGGGCATGCTaGCCAGGATGCGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHCGWAC*PGCGVW
Trigger: CCACACTCCGCATCCTGGCCAGCATGCCCAGCCGCA...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CTTGAGGATGAGGTTCCTGCGGAGGGCGGGGTGCAAAGGCTGAGGGGCGGGTACGGGCTGCCACACGGCTaGTTCAGCGTGGCGTTACTG +
Preference number: 4 (lower is better)
Translates to: LEDEVPAEGGVQRLRGGYGLPHG*FSVALL
Trigger: CAGTAACGCCACGCTGAACCAGCCGTGTGGCAGCCC...GTACCCGCCCCTCAGCCTTTGCACCCCGCCCTCCGCAGGAACCTCATCCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTCTGCCATCTGGGGCTTaGCCAGCAGAGGGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPLPSGA*PAEGAP
Trigger: GGGGGCGCCCTCTGCTGGCCAAGCCCCAGATGGCAG...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGCCCCCACCAGGGGCTTaGTCACACCGGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQPPPGA*SHRPHP
Trigger: AGGATGAGGCCGGTGTGACCAAGCCCCTGGTGGGGG...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGGCCCCCATCTGGGACTaGAGGCTGGACCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRAPIWD*RLDHKK
Trigger: CTTCTTGTGGTCCAGCCTCCAGTCCCAGATGGGGGC...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR TCA 90 bp GTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTGGGCATGCTCAGGGACATCGAGGATaGAGGCCAGTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLGDDGTSAAANGAAGHAQGHRG*RPVAGP
Trigger: TGGCCCAGCCACTGGCCTTCATCCTCGATGTCCCTG...AGCATGCCCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR TCA 90 bp CAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGATGTAGTACTGGGAGATaGTGGCACCTCGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: QGPAAPAPKLHRAVVVLGCSTGR*WHLGCG
Trigger: GCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACA...TCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR TCA 90 bp CCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCGCGTGTCCAGCAACATaGGGACGAAGTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: PGHTSRPLRGEHSPPSPPACPAT*GRSPSP
Trigger: TGGTGATGGACTTCGTCCTCATGTTGCTGGACACGC...GGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp GCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCGGCTCTGCTCCTGGATaGGCCCTGGTCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAPAPKLHRAVVVLGDDGGSAPG*ALVPWG
Trigger: ACCCCAGGGGACCAGGGCTCATCCAGGAGCAGAGCC...GCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp CGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGTCCCGCTCTCTCTGCTaGAGCTCCAGCCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RAVVVLGDDGTSAAANGASRSLC*SSSPSW
Trigger: CCAGGAGGGGCTGGAGCTGCAGCAGAGAGAGCGGGA...CGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp CGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGTGGTGCGGCTGGGCATaGTGGCCAGGATGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: RAVVVLGDDGTSAAANGAWCGWA*WPGCGV
Trigger: CACTCCGCATCCTGGCCAGCATGCCCAGCCGCACCA...CGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGGTGCGAATATTGTCCTaGTGGAGGCGGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQVRILS*WRREAR
Trigger: GCGGGCCTCCCGCCTCCAGCAGGACAATATTCGCAC...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGGGGCTGTGCCGCAGCTaGCACTCGGCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMGLCRS*HSASSS
Trigger: GGAGCTGCTGGCCGAGTGGCAGCTGCGGCACAGCCC...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGACCACAGGCATGCATaGGCCACCCCACCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHDHRHA*ATPPSS
Trigger: TGAGCTGGGTGGGGTGGCGCATGCATGCCTGTGGTC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGTCCTGGGCCGTGCACTaGCTCTGCTCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQSWAVH*LCSWMS
Trigger: GCTCATCCAGGAGCAGAGCCAGTGCACGGCCCAGGA...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCCGTACAGGCGGAGGCTaGGCCAGGCGGAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: AAPAPKLHRAVVVLGDDGRTGGG*ARRSGQ
Trigger: TTGTCCGCTCCGCCTGGCCCAGCCTCCGCCTGTACG...GCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGAGCTCACGCCCACAGTaGAGAGGTAGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQSSRPQ*RGRPGA
Trigger: TGCCCCTGGCCTACCTCTCCACTGTGGGCGTGAGCT...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACATGCCGGGGCTTGCCTaGAGTCCTGGCAGAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHMPGLA*SPGRGV
Trigger: CACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCAT...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCGGGCAAGGTCAAAGGTaGACCCGCCCACTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVGQGQR*TRPLWV
Trigger: GACCCACAGTGGGCGGGTCCACCTTTGACCTTGCCC...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGGGGTGCAGCAGGTCTTaGCTTTCTTTGCCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRGCSRS*LSLPVP
Trigger: CGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCC...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp CTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGGCCCAGGCACAGGTaGATGCGGGGTGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHRAVVVLGDDGTSAAANGPRHR*MRGAAG
Trigger: ACCTGCTGCACCCCGCATCCACCTGTGCCTGGGCCC...ATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR TCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGAGCAACCCGCGCCTGTaGGGAGCTCCAGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQSNPRL*GAPGLC
Trigger: GCACAGGCCTGGAGCTCCTCACAGGCGCGGGTTGCT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTCTCTCCCCGAAAGAGTaGGCCATGCTGTACACCAGG +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPLSPKE*AMLYTR
Trigger: CCTGGTGTACAGCATGGCTCACTCTTTCGGGGAGAG...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTGATACAGCGGCCCCATaGGGCGAGGAGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPDTAAP*GEELGG
Trigger: ACCTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATC...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CGGACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCAATGCCCGCTAGTCTaGAGACCTAGGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RTKFPSRGRLLLHRSCTVQCPLV*RPRVAQ
Trigger: CTGAGCTACCCTAGGTCTGCAGACTAGCGGGCATTG...CACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGCATGTCTCTGGCCAATaGCCGCTAGTCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRHVSGQ*PLVCRP
Trigger: AGGTCTGCAGACTAGCGGGCATTGGCCAGAGACATG...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGACCGAAGCTGCACCGTaGGGTTGTAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRTEAAP*GCSTGR
Trigger: TCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGT...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCCCAGTAGGCGGAGGTTaGGGTGAGCCAAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVPVGGG*GEPRSS
Trigger: GGACGATCTTGGCTCACCGCAACCTCCGCCTACTGG...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGGTGCGGCCACACACCTaGAGATGGCCACGTACACCT +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQVRPHT*RWPRTP
Trigger: AGGTGTACGTGGCCATCTGCAGGTGTGTGGCCGCAC...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGCCTCCTCCAGGGCCGTaGGGTCCAGCTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMPPPGP*GPAPGR
Trigger: ACGACCTGGAGCTGGACCCCACGGCCCTGGAGGAGG...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CTTGAGGATGAGGTTCCTGCGGAGGGCGGGGTGCAAAGGCTGAGGGGCGGGTACACGGCTGGTTCAGCGTaGCGTTACTGTAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LEDEVPAEGGVQRLRGGYTAGSA*RYCSGR
Trigger: ACGGCCACTACAGTAACGCCACGCTGAACCAGCCGT...GTACCCGCCCCTCAGCCTTTGCACCCCGCCCTCCGCAGGAACCTCATCCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGCGAATATTGTCCTGCTaGAGGCGGGAGGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQRILSC*RREARF
Trigger: GAAGCGGGCCTCCCGCCTCCAGCAGGACAATATTCG...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGCTGGCAAGCCAGCAGTaGCAGGCGCACGTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQLASQQ*QAHVPS
Trigger: GCTGGGGACGTGCGCCTGCCACTGCTGGCTTGCCAG...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTCCCGTGCCTGTGCGCTaGGAGAACAAGGTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPPVPVR*ENKVSA
Trigger: GGCGCTGACCTTGTTCTCCCAGCGCACAGGCACGGG...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTAGGAACTGTGGGGTTTaGGACACAGGCTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: QSSRAGAGCSCTEAAPCGRNCGV*DTGSSG
Trigger: TCCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCT...ACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp CTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATTCCGGAGCCCCCATCTaGGACTGGAGGCTGGACCAC +
Preference number: 4 (lower is better)
Translates to: LHRAVVVLGDDGTSAAANSGAPI*DWRLDH
Trigger: GTGGTCCAGCCTCCAGTCCCAGATGGGGGCTCCGGA...ATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp CTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATCTCCTGGATGAGCCCTaGTCCCCTGGGGTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LHRAVVVLGDDGTSAAANLLDEP*SPGVSG
Trigger: CCCTGAGACCCCAGGGGACCAGGGCTCATCCAGGAG...ATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR TCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACCTCTCCCCGAAAGAGTaGGCCATGCTGTACACCAGG +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHLSPKE*AMLYTR
Trigger: CCTGGTGTACAGCATGGCTCACTCTTTCGGGGAGAG...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAAGGGGGCCCCCAGGTTaGGGAGGCCAACCACCAGGG +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQARGPPG*GGQPPG
Trigger: CCCTGGTGGTTGGCCTCCTCAACCTGGGGGCCCCCT...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCATGGCGAGCCCCGACTaGGTGTTCAGTGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVMASPD*VFSEEG
Trigger: TCCCTCTTCACTGAACACTCAGTCGGGGCTCGCCAT...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTCCGTGGCCTTCAGGGTaGCCAGTCAGTGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSPWPSG*PVSATG
Trigger: CCCGGTGGCACTGACTGGTCACCCTGAAGGCCACGG...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGGGGCCGGCTGCTCCTaGACCGAAGCTGCACCGTGC +
Preference number: 4 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPGAGCS*TEAAPC
Trigger: GCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTCGAACTGGCCCCCGATaGGCTTCAGGGCGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSRTGPR*ASGRSA
Trigger: GGCGCTACGCCCTGAAGCGCATCGGGGGCCAGTTCG...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGTGCCATCCAGGGGGCTaGCACACGGCTGGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMCHPGG*HTAGSA
Trigger: CGCTGAACCAGCCGTGTGGCAGCCCCCTGGATGGCA...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTGCTCCTTCAGCCGGGTaGGAATATTGTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPAPSAG*EYCPAG
Trigger: TCCAGCAGGACAATATTCGCACCCGGCTGAAGGAGC...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGCTGCCACAGTTGGCTaGCCAGAATCAGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHAATVG*PESAPA
Trigger: AGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGGGCAACCCTCAGCTCTaGGCGGCCGAGCCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMGNPQL*AAEPQQ
Trigger: TTGCTGAGGCTCGGCCGCGCAGAGCTGAGGGTTGCC...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTGGTCTTGGCTTTCTTTaGCTGTGCCGGTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: QSSRAGAGCSCTEAAPCGGLGFL*LCRSRL
Trigger: AAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACC...ACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACGTGGGGCCGCGGGCTaGACATCCAGTGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQARGAAG*TSSGSG
Trigger: CCCACTCCCACTGGATGTCCAGCCCGCGGCCCCACG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGACACAGAGGCATCATaGCGAGCCCCGACTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHDTEAS*RAPTEC
Trigger: ACACTCAGTCGGGGCTCGCCATGATGCCTCTGTGTC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGAAGCGAATCAAGCCCTaGCGCGGTCCAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMKRIKP*RGPAPA
Trigger: GGCAGGGGCTGGACCGCGCCAGGGCTTGATTCGCTT...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGGAATTGTCTCTCCTTaGGGTGACGGTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RAVVVLGDDGTSAAANGAGIVSP*GDGGPR
Trigger: CCTGGGCCCACCGTCACCCCAAGGAGAGACAATTCC...CGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR TCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTGACGGTGCTCATGTGTaGGGCCAGCCAGGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTDGAHV*GQPGPA
Trigger: CGCCGGCCCTGGCTGGCCTCACACATGAGCACCGTC...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCACGCAAGGGCTGCTCTaGAGAAATACGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVTQGLL*RNTGGP
Trigger: AGGACCTCCCGTATTTCTTCAGAGCAGCCCTTGCGT...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACGGCGGAGCTGTGGCTaGTGGGCTCCTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQARRSCG*WAPGAG
Trigger: TCCTGCACCAGGAGCCCATCAGCCACAGCTCCGCCG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTCTGGTCTCAAACTCCTaGCCTCAGGTGATCCACTCA +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPLVSNS*PQVIHS
Trigger: TGAGTGGATCACCTGAGGTCAGGAGTTTGAGACCAG...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGTGGTGCGGCTGGGCATaGTGGCCAGGATGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSWCGWA*WPGCGV
Trigger: CACTCCGCATCCTGGCCAGCATGCCCAGCCGCACCA...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGACCGAAGCTGCACCGTaGGGTTGTAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQTEAAP*GCSTGR
Trigger: TCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGT...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGTCCCCCTCGGGGTCCTaGTCTTCTCTCGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSSPSGS*SSLAGC
Trigger: GCAGCCTGCGAGAGAAGAGCAGGACCCCGAGGGGGA...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCGTCCTGGCAGAGGAGTaGCACTCACTTTTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVVLAEE*HSLLPR
Trigger: CCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGAC...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTACGGCAGCAAGAAGATaGCGGGGCTTGCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPTAARR*RGLPGV
Trigger: GACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CTTGAGGATGAGGTTCCTGCGGAGGGCGGGGTGCAAAGGCTGAGGGGCGGGTACAGGCATGAGCCACCATaGCTGGCCATACACATCACT +
Preference number: 4 (lower is better)
Translates to: LEDEVPAEGGVQRLRGGYRHEPP*LAIHIT
Trigger: AGTGATGTGTATGGCCAGGCATGGTGGCTCATGCCT...GTACCCGCCCCTCAGCCTTTGCACCCCGCCCTCCGCAGGAACCTCATCCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCTCTGGTCACAATCCGTaGCTGCTCGGCTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVSGHNP*LLGSLV
Trigger: CACAAGTGAGCCGAGCAGGCACGGATTGTGACCAGA...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTCGCCAGAGTGTCTGCTaGCTACTTCCTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: AVVVLGDDGTSAAANGAARQSVC*LLPVTS
Trigger: GGAGGTGACAGGAAGTAGCCAGCAGACACTCTGGCG...AGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGGGCTGCCACACGGCTaGTTCAGCGTGGCGTTACTG +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQGLPHG*FSVALL
Trigger: CAGTAACGCCACGCTGAACCAGCCGTGTGGCAGCCC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTGCAGGCCACCCACCCTaGGTGTGCACTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSAGHPP*VCTGCH
Trigger: ATGGCAGCCAGTGCACACCCAGGGTGGGTGGCCTGC...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CTTGAGGATGAGGTTCCTGCGGAGGGCGGGGTGCAAAGGCTGAGGGGCGGGTACGCAGCCTCTGGACTCTaGATCATGAACTCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: LEDEVPAEGGVQRLRGGYAASGL*IMNSEK
Trigger: CTTCTCGGAGTTCATGATCCAGAGTCCAGAGGCTGC...GTACCCGCCCCTCAGCCTTTGCACCCCGCCCTCCGCAGGAACCTCATCCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGAACCGGTACAGCTCCTaGCCCACAAAATCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQNRYSS*PTKSSQ
Trigger: CTGGGAGGATTTTGTGGGCCAGGAGCTGTACCGGTT...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACCTCACTGGAGGGTCTaGGGCCACACGGTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAPHWRV*GHTVGP
Trigger: CGGACCCACCGTGTGGCCCCAGACCCTCCAGTGAGG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTATCCGGAGCCCCCATCTaGGAGGCGCCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLSGAPI*EAPGRR
Trigger: CCTCCTCCCCGGCGCCTCCCAGATGGGGGCTCCGGA...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGGTGTAAGCCCCTCCTaGGCGCGAGTTCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQGVSPS*ARVQAG
Trigger: ACCAGCCTGAACTCGCGCCCAGGAGGGGCTTACACC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTGGGCATGAGTCCCAGGAACTGTaGGGTTTGGGACACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VVLGDDGTSAAANGAAGHESQEL*GLGHRL
Trigger: GAGCCTGTGTCCCAAACCCCACAGTTCCTGGGACTC...ATGCCCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR CAA 72 bp ATCGCTCTGGTCACAATCCGTGCCTGCTCGGCTCACTaGTGCAGGTGTAAGCCCCTCCTGGGCGCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: IALVTIRACSAH*CRCKPLLGASS
Trigger: TGAACTCGCGCCCAGGAGGGGCTTACACCTGCACAAGTGAGCCGAGCAGGCACGGATTGTGACCAGAGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTAGCTCCAGCACCAAATaGTGTTTTCATGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPSSSTK*CFHVRP
Trigger: TGGCCGCACATGAAAACATCATTTGGTGCTGGAGCT...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp AAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCATTCTCTCTCATTTCTaGGCCCCGGAGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KLHRAVVVLGDDGTSAAAILSHF*APEVAE
Trigger: CTCTGCCACCTCCGGGGCTCAGAAATGAGAGAGAAT...GGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGTGGGTGTGCACTGGCTaGCATCCAGGGGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEWVCTG*HPGGCH
Trigger: GTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCA...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCACCCACCCTGGGTGTaGACTGGCTGCCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEHPPWV*TGCHPG
Trigger: CCCTGGATGGCAGCCAGTGCACACCCAGGGTGGGTG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCCAGGGCTCACCTGTaGCCCGCAAGAGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPARAHL*PARAAG
Trigger: CCCGGCGGCTCTTGCGGGGCACAGGTGAGCCCTGGC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTCCCGAGAAGATCCTCTaGAGGAGTGCGGTGTCTACG +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPPEKIL*RSAVST
Trigger: CGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGG...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGCTAGCAGTGTGGCGTaGCAAGAAGGCTGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHASSVA*QEGCSN
Trigger: ATTGGAACAGCCTTCTTGGCACGCCACACTGCTAGC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGGTCCAGACTTTCTGTaGCCTTTGGATCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: QGPAAPAPKLHRAVVVLGGPDFL*PLDLSP
Trigger: GGGTGAAAGATCCAAAGGGCACAGAAAGTCTGGACC...TCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp CTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATTCCGGAAGGGCAAACTaGCACGTGGAGAAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LHRAVVVLGDDGTSAAANSGRAN*HVEKRG
Trigger: CCCTCTCTTCTCCACGTGGCAGTTTGCCCTTCCGGA...ATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR GCA 90 bp CGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGTCAGATGTGGCAGATaGCGAGTCCCAGGAACTGTG +
Preference number: 4 (lower is better)
Translates to: RAVVVLGDDGTSAAANGAVRCGR*RVPGTV
Trigger: CACAGTTCCTGGGACTCGGCATCTGCCACATCTGAC...CGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCCAGGATGCGGAGTGTaGCCGTGCTCTGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEPGCGV*PCSGCP
Trigger: AGGGCACCCAGAGCACGGCCACACTCCGCATCCTGG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGCTCGGCTGCGGCCAATaGTGCGGCTGGGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLLGCGQ*CGWACW
Trigger: CCAGCATGCCCAGCCGCACCATTGGCCGCAGCCGAG...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCGTACAGGCGGAGGCTaGGCCAGGCGGAGCGGACAA +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCRTGGG*ARRSGQ
Trigger: TTGTCCGCTCCGCCTGGCCCAGCCTCCGCCTGTACG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTACGGCTGGTTCAGCGTaGCGTTACTGTAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPTAGSA*RYCSGR
Trigger: ACGGCCACTACAGTAACGCCACGCTGAACCAGCCGT...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGACCCTGGGTGTGCACTaGCTGCCATCCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSETLGVH*LPSRGL
Trigger: CAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGT...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGCGAATATTGTCCTGCTaGAGGCGGGAGGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMRILSC*RREARF
Trigger: GAAGCGGGCCTCCCGCCTCCAGCAGGACAATATTCG...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGGGGCTGGACATCCAGTaGGAGTGGGAAGCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEGLDIQ*EWEAAV
Trigger: GACGGCGGCTTCCCACTCCCACTGGATGTCCAGCCC...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGTCTGGGGCCACACGGTaGGTCCGGAGACAGAAACGA +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQSGATR*VRRQKR
Trigger: TCGTTTCTGTCTCCGGACCCACCGTGTGGCCCCAGA...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTTTCTCGGCGGAGCTGTaGCTGATGGGCTCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSFSAEL*LMGSWC
Trigger: GCACCAGGAGCCCATCAGCCACAGCTCCGCCGAGAA...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTGGACCCGCCCACTGTaGGTCAATTCCTTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHWTRPL*VNSFEK
Trigger: CTTTTCGAAGGAATTGACCCACAGTGGGCGGGTCCA...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCTCAGTGCCACCGGGTTaGCATTGGTGTTACAGACAG +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVSVPPG*HWCYRQ
Trigger: CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGA...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTGGGCATATCCAGAGTCAGATGTaGCAGATGCCGAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VVLGDDGTSAAANGAAGHIQSQM*QMPSPR
Trigger: CCTGGGACTCGGCATCTGCCACATCTGACTCTGGAT...ATGCCCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR CAA 72 bp TGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTaGATACAGCGGCCCCATGAGGCGAGGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CQAWYAAHKLCH*IQRPHEARSWE
Trigger: CTCCCAGCTCCTCGCCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCACAGGGACATCGAGGATaGAGGCCAGTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPQGHRG*RPVAGP
Trigger: TGGCCCAGCCACTGGCCTTCATCCTCGATGTCCCTG...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGGGCTCTGCTCCTGGATaGGCTGCTGGAAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSGSAPG*AAGRSR
Trigger: ACGACTCCTTCCAGCAGCTCATCCAGGAGCAGAGCC...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGAAGGCTGGTCTTCTTaGCATAGAAGACGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHEGWSS*HRRRAA
Trigger: TGCTGCTCGTCTTCTATGTCAAGAAGACCAGCCTTC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLRAAGN*GLGSPC
Trigger: GCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTTTACAGACAGGCCTCTaGAGACAAACCGAGCACCCC +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPLQTGL*RQTEHP
Trigger: GGGGTGCTCGGTTTGTCTTCAGAGGCCTGTCTGTAA...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTACGAGCAGGGGCCGGCTaGTCCTGCACCGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLRAGAG*SCTEAA
Trigger: TGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCG...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTAGGAAGGGGCCGCAGGTaGTCGAGGGCTTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLGRGRR*SRASPA
Trigger: GGCAGGTGAAGCCCTCGAGCACCTGCGGCCCCTTCC...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGACAAGCCTGGAACCCTaGGCCGTGACGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLTSLEP*AVTGWS
Trigger: GGACCAGCCCGTCACGGCGCAGGGTTCCAGGCTTGT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGGACCACAGGCATaGATGCGCCACCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCLGPQA*MRHPTQ
Trigger: CTGGGTGGGGTGGCGCATGCATGCCTGTGGTCCCAG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGGCAAACTGTACCCGTaGCTGTGCGCTGGGAGAACA +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQGKLYP*LCAGRT
Trigger: TGTTCTCCCAGCGCACAGGCACGGGTACAGTTTGCC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCATGAAGGCCAGTGGCTaGGCCATGTCTCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: AAPAPKLHRAVVVLGDDGMKASG*AMSLAN
Trigger: ATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCAT...GCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGCACTGGCTCTGCTCCTaGATGAGCTGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMHWLCS*MSCWKE
Trigger: CTCCTTCCAGCAGCTCATCCAGGAGCAGAGCCAGTG...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAATCCCGCGAAGCATGTaGTCCCGCTGTGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAIPRSM*SRCATA
Trigger: GGCAGTGGCACAGCGGGACCACATGCTTCGCGGGAT...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATCCTGCCGCCTCCAGGTaGCGCACCCACACCCTGCCG +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADPAASR*RTHTLP
Trigger: CGGCAGGGTGTGGGTGCGCCACCTGGAGGCGGCAGG...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGGGCTAGACCCAGCGTaGGGGTCTGCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLGLDPA*GSASSQ
Trigger: CTGGCTGCTAGCAGACCCCCACGCTGGGTCTAGCCC...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCCCCATGGGATTGGGTaGGCTAGACCCAGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCPHGIG*ARPSVG
Trigger: CCCCACGCTGGGTCTAGCCCACCCAATCCCATGGGG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGACGGGAGGTCCTCACTaGAGGGTCTGGGGCCACACG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLTGGPH*RVWGHT
Trigger: CGTGTGGCCCCAGACCCTCCAGTGAGGACCTCCCGT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTGCTTGCCTGGAGTCCTaGCAGAGGAGTGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSACLES*QRSATH
Trigger: GTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAAGC...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGATCTCCATCTGGGTCTaGCCCTTTTCTGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMISIWV*PFSGPI
Trigger: GATGGGCCCAGAAAAGGGTCAGACCCAGATGGAGAT...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGGCACCAGCTACTTGCTaGGGCCCAGAAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSAPATC*GPEAPL
Trigger: AAGTGGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGC...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTACAGGTCACAACCAATaGTCATGCTGGCAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPTGHNQ*SCWQAS
Trigger: GCTGGCTTGCCAGCATGATCATTGGTTGTGACCTGT...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCAGTTCGTTTTGTGCCTaGGTTACTACTACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GASSGWSKAASESSPGAVSSFCA*VTTTGA
Trigger: TGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACT...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATTGGCCGTGCTCTGGGTaGCCTCGGGCCGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADWPCSG*PRAARV
Trigger: CACTCTGGCGGCCCGAGGGCACCCAGAGCACGGCCA...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGACCGAAGCTGCACCGTaGGGTTGTAGTACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQTEAAP*GCSTGR
Trigger: TCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCCAGGCCCAGGCTGTaGAAGGCCAGCACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPARPRL*KASTQA
Trigger: TGCCTGCGTGCTGGCCTTGCACAGCCTGGGCCTGGC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGTGCGAATATTGTCCTaGTGGAGGCGGGAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLVRILS*WRREAR
Trigger: GCGGGCCTCCCGCCTCCAGCAGGACAATATTCGCAC...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGGTCTCGGCTCTCCTTaGCAAGGGAGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPGLGSP*QGSGKG
Trigger: CCCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTTTTGTGACAGCCTGGTaGTCGGATGGGCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSFVTAW*SDGPRA
Trigger: TGCTCTGGGCCCATCCGAGCACCAGGCTGTCACAAA...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CGGCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTAATGATGTTTTCATGTaGGGCCACACACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RPLRGEHSPPSPPRTPSPNDVFM*GHTPAD
Trigger: ATCTGCAGGTGTGTGGCCGCACATGAAAACATCATT...AGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp CTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGCTTTCTTTGCCTGTaGCGGTCCAGACTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHRAVVVLGDDGTSAAANGFLCL*RSRLSV
Trigger: CACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCC...ATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCTTTCATCATAGGGGCTaGGGCCCTGGCCCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTFHHRG*GPGPGP
Trigger: GGGACCAGGGCCAGGGCCCCAGCCCCTATGATGAAA...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTTGGGAGGCAACAGTGTaGTCTCAGGGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCWEATV*SQGAGR
Trigger: CCGCCCAGCACCCTGAGACCACACTGTTGCCTCCCA...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATGGCCCCAGGGGCGACTaGGCCAGTCGCAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNGPRGD*ASRRSA
Trigger: GGCAGACCTGCGACTGGCCCAGTCGCCCCTGGGGCC...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCACGCAAAGACCTCGTaGGCCTGGGTGTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCHAKTS*AWVSRA
Trigger: TGCCCTGGACACCCAGGCCCACGAGGTCTTTGCGTG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGATTCCTTCGAAAAGATaGGACCCGCACCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSIPSKR*DPHPRH
Trigger: GTGGCGGGGGTGCGGGTCCCATCTTTTCGAAGGAAT...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGGCAAACTGCCACGTaGAGAAGAGAGGGAATTGTC +
Preference number: 4 (lower is better)
Translates to: PAAPAPKLHRAVVVLGDDGQTAT*RREGIV
Trigger: GACAATTCCCTCTCTTCTCCACGTGGCAGTTTGCCC...ATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
3UTR CAA 72 bp TGCCACAGTTGGCTGCCCAGAATCAGCACCAGCTACTaGCTGAGGCCCAGAAGCACCACTTGGCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: CHSWLPRISTSY*LRPRSTTWLRS
Trigger: GGATCTGAGCCAAGTGGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp ACCCAGCAGCACTCGCACCTGAAGATGCTGCCACAGTaGGCTGCCCAGAATCAGCACCAGCTACTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TQQHSHLKMLPQ*AAQNQHQLLAE
Trigger: CTCAGCAAGTAGCTGGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCTTCAGGTGCGAGTGCTGCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATAGGGGGCCCCCAGGTTaGGGAGGCCAACCACCAGGG +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNRGPPG*GGQPPG
Trigger: CCCTGGTGGTTGGCCTCCTCAACCTGGGGGCCCCCT...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGGCGTGTCCAGCAACATaGGGACGAAGTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSACPAT*GRSPSP
Trigger: TGGTGATGGACTTCGTCCTCATGTTGCTGGACACGC...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCCAAGCCCACGGGCGTaGGTGCATGCATGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCPSPRA*VHACVC
Trigger: ACAAACGCATGCATGCACTCACGCCCGTGGGCTTGG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGGCCCCAGGTCATCATaGAAACCAGAAGCAGACACT +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQGPRSS*KPEADT
Trigger: AGTGTCTGCTTCTGGTTTTCATGATGACCTGGGGCC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTCACGCTGGAGTGCAGTaGTGTAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSHAGVQ*CNLGSL
Trigger: CAGTGAGCCGAGATTACATCACTGCACTCCAGCGTG...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCACCTCCCGCTCTCTCTaGTGCAGCTCCAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPTSRSL*CSSSPS
Trigger: GGAGGGGCTGGAGCTGCAGCAGAGAGAGCGGGAGGT...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTGCTCCTTCAGCCGGGTaGGAATATTGTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSAPSAG*EYCPAG
Trigger: TCCAGCAGGACAATATTCGCACCCGGCTGAAGGAGC...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCATCAGATCCACCCAGATaGCAACTCTGTCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPSDPPR*QLCRAP
Trigger: AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGA...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCGTCACTTTCTGGACTaGCCACGCAGCTTCACCCAG +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSERHFLD*PRSFTQ
Trigger: CTGGGTGAAGCTGCGTGGGCAGTCCAGAAAGTGACG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGGTCACAATCCGTGCCTaGTCGGCTCACTTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEVTIRA*SAHLCR
Trigger: CCTGCACAAGTGAGCCGAGCAGGCACGGATTGTGAC...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAGCCTCCAAGCACAGGTaGTGGTTACCTATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAASKHR*WLPMPG
Trigger: CCCAGGCATAGGTAACCAGCACCTGTGCTTGGAGGC...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTGGCAGTTTCAGACCTaGCCTTTGTGGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHWQFQT*PLWFVF
Trigger: AAACACAAACCACAAAGGGCAGGTCTGAAACTGCCA...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTATCCTGGGCCGTGCACTaGCTCTGCTCCTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLSWAVH*LCSWMS
Trigger: GCTCATCCAGGAGCAGAGCCAGTGCACGGCCCAGGA...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCGCCAGAGTGTCTGCTaGCTACTTCCTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSERQSVC*LLPVTS
Trigger: GGAGGTGACAGGAAGTAGCCAGCAGACACTCTGGCG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTAGATGCTGCCACAGTTaGCTGCCCAGAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSRCCHS*LPRIST
Trigger: GGTGCTGATTCTGGGCAGCCAACTGTGGCAGCATCT...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGACATCCAGTGGGAGTaGGAAGCCGCCGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLDIQWE*EAAVSR
Trigger: CCTTGAGACGGCGGCTTCCCACTCCCACTGGATGTC...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCACATGAGGCGAGGAGCTaGGAGGTCACAGAACATGCC +
Preference number: 4 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPHEARS*EVTEHA
Trigger: GGCATGTTCTGTGACCTCCCAGCTCCTCGCCTCATG...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCTCCTGGTGCAGGACTaGCCCCTGAACAGCACAAGT +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSELLVQD*PLNSTS
Trigger: ACTTGTGCTGTTCAGGGGCCAGTCCTGCACCAGGAG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTTGTTGCTGCTATTTTaGCAACATCACGGCAGAACG +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHLLLLF*QHHGRT
Trigger: CGTTCTGCCGTGATGTTGCCAAAATAGCAGCAACAA...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAAGCTCTCCACCCCCGTaGCCCATCCAAGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPSSPPP*PIQVCS
Trigger: TGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTTACAGCATCACCCAATaGTTGACGCATCGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPYSITQ*LTHRSG
Trigger: ACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTA...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGAAGACCTCGTGGGCCTaGGTGTCCAGGGCACCATTT +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEKTSWA*VSRAPF
Trigger: AAATGGTGCCCTGGACACCCAGGCCCACGAGGTCTT...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GCCACTAAGGGGAGAACACTCACCACCCAGTCCGCCCAGGACCCCCTCACCTCCCCATACACATCACTTTaGAACCTGTTTTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ATKGRTLTTQSAQDPLTSPYTSL*NLFSFP
Trigger: TGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGG...GGAGGTGAGGGGGTCCTGGGCGGACTGGGTGGTGAGTGTTCTCCCCTTAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAGCATCACCCAATGGTTaGCGCATCGCTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAASPNG*RIALVT
Trigger: TGTGACCAGAGCGATGCGTCAACCATTGGGTGATGC...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTCAGCACCCAGATGTCTaGAGAGCACAGGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTQHPDV*RAQEHP
Trigger: GGGATGCTCCTGTGCTCTGCAGACATCTGGGTGCTG...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGCAAACATGGCCTCCTTaGAACACCTCAAATGGGTGC +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQQTWPP*NTSNGC
Trigger: GCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTG...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTGCCCACGGGCGTGAGTaGATGCATGCGTTTGTGACA +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCAHGRE*MHAFVT
Trigger: TGTCACAAACGCATGCATGCACTCACGCCCGTGGGC...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAGGAGAGCTGTCCCGCTaGATGCGTTCCCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAGELSR*MRSLCN
Trigger: ATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCC...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGTGCTCGGCTCACTTGTaGAGGTGTAAGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLCSAHL*RCKPLL
Trigger: CAGGAGGGGCTTACACCTGCACAAGTGAGCCGAGCA...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGATGAAGGCCAGTGGCTaGGCCATGTCTCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEMKASG*AMSLAN
Trigger: ATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCAT...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCACTGGCCCTGGTCCCCTaGGGTCTCAGGGACATCGAG +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITALALVP*GLRDIE
Trigger: CTCGATGTCCCTGAGACCCCAGGGGACCAGGGCCAG...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTCCCCACAGCCTGGCCTaGTTGACACGAAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTPHSLA*LTRKTD
Trigger: GTCAGTCTTTCGTGTCAACCAGGCCAGGCTGTGGGG...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGGGAAAACAGAGACAGTaGGGCATCCCGAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSGKQRQ*GIPRRS
Trigger: GGATCTTCTCGGGATGCCCCACTGTCTCTGTTTTCC...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCTGGTTACCTATGCCTaGGAGGCAACTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSELVTYA*EATVPT
Trigger: TGTGGGGACAGTTGCCTCCCAGGCATAGGTAACCAG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTTGGATTTTGACAGACTaGGAACTCGGGGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSWILTD*ELGGQE
Trigger: CTCCTGTCCCCCGAGTTCCCAGTCTGTCAAAATCCA...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTACACCCATGGGGAAGGTaGTGTGCTGCTGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLHPWGR*CAAGSD
Trigger: GTCAGAGCCAGCAGCACACCACCTTCCCCATGGGTG...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTTCTGTCTGCGCTCCCTaGGGCAAGGTCAAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCSVCAP*GKVKGG
Trigger: TCCACCTTTGACCTTGCCCCAGGGAGCGCAGACAGA...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp TCCTGCTCCAGTAGATGCTACAGCATCACCCAATGGTaGACGCATCGCTCTGGTCACAATCCGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCSSRCYSITQW*THRSGHNPCLL
Trigger: GAGCAGGCACGGATTGTGACCAGAGCGATGCGTCAACCATTGGGTGATGCTGTAGCATCTACTGGAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp CAGCTCTGCGCGGCCGAGCCTCAGCAAGAGTTCGTTTaGTGCCTGAGTTACTACTACAGGGGCAAACTGTAC +
Preference number: 4 (lower is better)
Translates to: QLCAAEPQQEFV*CLSYYYRGKLY
Trigger: GTACAGTTTGCCCCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTGAGGCTCGGCCGCGCAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNRAAGN*GLGSPC
Trigger: GCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCT...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTAGCATGCATGCGTTTGTaGCAGCCTGGTGCTCGGATG +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLACMRL*QPGARM
Trigger: CATCCGAGCACCAGGCTGTCACAAACGCATGCATGC...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCCAATGCCCGCTAGTCTaGAGACCTAGGGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTQCPLV*RPRVAQ
Trigger: CTGAGCTACCCTAGGTCTGCAGACTAGCGGGCATTG...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCCATGTCTCTGGCCAATaGCCGCTAGTCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTHVSGQ*PLVCRP
Trigger: AGGTCTGCAGACTAGCGGGCATTGGCCAGAGACATG...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCCGAGATCATGGAACTaGACTCCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCPRSWN*TPAWAR
Trigger: TCTTGCCCAGGCTGGAGTGCAGTTCCATGATCTCGG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGAGGCAGAAAGCACAGTaGCCAGCAGCTAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLRQKAQ*PAASSV
Trigger: CACACTGCTAGCTGCTGGGCACTGTGCTTTCTGCCT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCAGTGCCACTCACTTTTaGCTAGGGTCCAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTSATHF*LGSSWG
Trigger: GCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATGGAGGAGGTGGCATTTaGCCTGGGCCTGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADGGGGI*PGPGRP
Trigger: TGGTCTCCCAGGCCCAGGGCAAATGCCACCTCCTCC...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTACAGCGCCCAAGGGTGTaGAAAGGATGTGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLQRPRV*KGCGRL
Trigger: AAGCCTGCCACATCCTTTGCACACCCTTGGGCGCTG...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATTGCGGCTGGGCATGCTaGCCAGGATGCGGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNCGWAC*PGCGVW
Trigger: CCACACTCCGCATCCTGGCCAGCATGCCCAGCCGCA...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAAGCTCACGCCCACAGTaGAGAGGTAGGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITASSRPQ*RGRPGA
Trigger: TGCCCCTGGCCTACCTCTCCACTGTGGGCGTGAGCT...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCATCTGTCGGGCCCCTGTaGCAGCACCCAGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITASVGPL*QHPDVC
Trigger: GCAGACATCTGGGTGCTGCCACAGGGGCCCGACAGA...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACTACGTCGGTCCCTGTaGACTGTCACGTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQALRRSL*TVTSLS
Trigger: AGAAAGTGACGTGACAGTCCACAGGGACCGACGTAG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGGGGACCGTGATGGTTTaGAGGACAGCATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLGTVMV*RTASAQ
Trigger: CTGTGCAGATGCTGTCCTCCAAACCATCACGGTCCC...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGAATGGGTGCCAGGCATaGTACGCAGCACACAAACTG +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSENGCQA*YAAHKL
Trigger: CAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATT...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGTTGCAACACCTCAAATaGGTGCCAGGCATGGTACGC +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSELQHLK*VPGMVR
Trigger: GCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAA...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCCTCCGCCTCAGCCTCTaGAGCAGCTGCAATTACAGA +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTLRLSL*SSCNYR
Trigger: TCTGTAATTGCAGCTGCTCCAGAGGCTGAGGCGGAG...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGATAAACCGAAACTCTTaGGCTCAAGCAATCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQINRNS*AQAILR
Trigger: GCGGAGGATTGCTTGAGCCCAAGAGTTTCGGTTTAT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGTGCGGTGTCTACGGATaGACCAAGAAAACCTACGCA +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSCGVYG*TKKTYA
Trigger: TGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCA...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAAGAAGGCTGTTCCAATaGGGGAGAAGCCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQARRLFQ*GRSQQT
Trigger: TGTCTGCTGGCTTCTCCCCCATTGGAACAGCCTTCT...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTATTTGCACGCTGCGATTaGGAGAGCTGTCCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLFARCD*ESCPAA
Trigger: TGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAA...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTGTTGACGCATCGCTCTaGTCACAATCCGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTVDASL*SQSVPA
Trigger: AGCAGGCACGGATTGTGACCAGAGCGATGCGTCAAC...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGCCTGGGAGACCAGGTTaGATTTTGACAGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSPGRPG*ILTDWE
Trigger: TTCCCAGTCTGTCAAAATCCAACCTGGTCTCCCAGG...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCCCACCGGGTTGGCATTaGTGTTACAGACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTPPGWH*CYRQAS
Trigger: AGAGGCCTGTCTGTAACACCAATGCCAACCCGGTGG...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp ATCTTAGGCTGCTCTCATCGAGCAAACATGGCCTCCTaGCAACACCTCAAATGGGTGCCAGGCATGGTACGC +
Preference number: 4 (lower is better)
Translates to: ILGCSHRANMAS*QHLKWVPGMVR
Trigger: GCGTACCATGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGCAGCCTAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGACAAACTGTGTCACTTaGTACAGCGGCCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLTNCVT*YSGPMR
Trigger: CCTCATGGGGCCGCTGTATCAAGTGACACAGTTTGT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTAGCACAAGTGTAGTATaGCTGGGCCCCAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTSTSVV*LGPRSS
Trigger: TGATGACCTGGGGCCCAGGCATACTACACTTGTGCT...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTAAGCTCTGCATATCAGTaGTTCTCGGCGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLSSAYQ*FSAELW
Trigger: CCACAGCTCCGCCGAGAAGCACTGATATGCAGAGCT...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCAGCTGTCCCGCTGCATaGGTTCCCTCTGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTSCPAA*VPSVIS
Trigger: GGAAATTACAGAGGGAACGCATGCAGCGGGACAGCT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTAGTCTACTTTGCACGCTaGGATTGGGAGAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLVYFAR*DWESCP
Trigger: GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGAC...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGGTGCTGGTTACCTATaGCTGGGAGGCAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPGAGYL*LGGNCP
Trigger: GGGACAGTTGCCTCCCAGGCATAGGTAACCAGCACC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCAGGGTGACCAGTCAGTaGCACCGGGTTGGCATTGGT +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPRVTSQ*HRVGIG
Trigger: ACCAATGCCAACCCGGTGGCACTGACTGGTCACCCT...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCTGCACAGATAGGGGCTaGAAACCCTACGTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPCTDRG*KPYVGP
Trigger: GGGACCGACGTAGGGTTTCCAGCCCCTATCTGTGCA...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACTCATCGAGCAAACATaGCCTCCTTGCAACACCTCA +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQALIEQT*PPCNTS
Trigger: TGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp ACCTATGCCTGGGAGGCAACTGTCCCCACAACTCATTaGCAACTGATATGTCTCCCCTCCAAGTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: TYAWEATVPTTH*QLICLPSKSLS
Trigger: AGAGAGGGACTTGGAGGGGAGACATATCAGTTGCAAATGAGTTGTGGGGACAGTTGCCTCCCAGGCATAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp CGTTGTGCAGCCCAGGCCGAGAAGCATCGCGGAGTCTaGTCATTCAGCCTGAAAATAGCATCAAGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RCAAQAEKHRGV*SFSLKIASSSH
Trigger: ATGGGAACTTGATGCTATTTTCAGGCTGAATGACAAGACTCCGCGATGCTTCTCGGCCTGGGCTGCACAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp AAAAGACACTATGGATGTCTACTTTGCACGCTGCGATaGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KRHYGCLLCTLR*GELSRCMRSLC
Trigger: ACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATGGCTCTGCTCCTGGATaGGCTGCTGGAAGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNGSAPG*AAGRSR
Trigger: ACGACTCCTTCCAGCAGCTCATCCAGGAGCAGAGCC...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR TCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATGCCAGAGAGGGACCGTaGTGGTTTGGAGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADAREGP*WFGGQH
Trigger: ATGCTGTCCTCCAAACCATCACGGTCCCTCTCTGGC...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTAACTCAAAATGCACTTaGACCTGGAAGCGGCAACCC +
Preference number: 4 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTNSKCT*TWKRQP
Trigger: GGGTTGCCGCTTCCAGGTTCAAGTGCATTTTGAGTT...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAGTGTGCTGCTGGCTCTaGCCATACTCTTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAVCCWL*PYSFGN
Trigger: ATTTCCAAAAGAGTATGGTCAGAGCCAGCAGCACAC...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGTTGGAGGACAGCATCTaGACAGATAGGGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLLEDSI*TDRGWK
Trigger: TTTCCAGCCCCTATCTGTGCAGATGCTGTCCTCCAA...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCCCAGCACGCAAGGGCTaGTCTGAAGAAATACGGGAG +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPPARKG*SEEIRE
Trigger: CTCCCGTATTTCTTCAGAGCAGCCCTTGCGTGCTGG...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTAAACACCTCAAATGGGTaGCAGGCATGGTACGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLNTSNG*QAWYAA
Trigger: TGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTT...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTACAGGGTCTTGCCATTaGCCGTGCTGGATTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCTGSCH*PCWIQN
Trigger: GTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGT...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCAGATCCTCTGCAGGAGTaGGGTGTCTACGGATGGACC +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITADPLQE*GVYGWT
Trigger: GGTCCATCCGTAGACACCGCACTCCTGCAGAGGATC...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACAACAGGTTCTTCACCTaGATCTGTGGATATATATTT +
Preference number: 4 (lower is better)
Translates to: TAARRCRGLPGVLAEECHNRFFT*ICGYIF
Trigger: AAATATATATCCACAGATGCAGGTGAAGAACCTGTT...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCACTGTACCCGTGCCTGTaGGCTGGGAGAACAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITALYPCL*AGRTRS
Trigger: TGACCTTGTTCTCCCAGCGCACAGGCACGGGTACAG...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATGGCCAGTCGCAGGTCTaGCGGGGCCGGGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNGQSQV*RGRGSS
Trigger: GCTACTCCCCCGGCCCCGGCAGACCTGCGACTGGCC...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGTGAGGCTGGCAAGATaGGCTCAACAGGTCACAACC +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPVRLAR*AQQVTT
Trigger: GGTTGTGACCTGTTGAGCCCATCTTGCCAGCCTCAC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGGTAACTTCTGTTGTCTaGGACGGCAGCAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSEVTSVV*DGSKKM
Trigger: CATCTTCTTGCTGCCGTCCCAGACAACAGAAGTTAC...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTACATTTGCCCTGGGCCTaGGAGACCAGGTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLHLPWA*ETRLDF
Trigger: AAAATCCAACCTGGTCTCCCAGGCCCAGGGCAAATG...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACAACTCATTTGCAACTaGTATGTCTCCCCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAQLICN*YVSPPS
Trigger: ACTTGGAGGGGAGACATATCAGTTGCAAATGAGTTG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATTGGCCGTGCTCTGGGTaGCCTCGGGCCGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNWPCSG*PRAARV
Trigger: CACTCTGGCGGCCCGAGGGCACCCAGAGCACGGCCA...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCACTGGCTCTGCTCCTaGATGAGCTGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNHWLCS*MSCWKE
Trigger: CTCCTTCCAGCAGCTCATCCAGGAGCAGAGCCAGTG...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCAGCCTCTGGACTCTaGATCATGAACTCCGAGAAG +
Preference number: 4 (lower is better)
Translates to: SKDTMDVYFARCDWESCPAASGL*IMNSEK
Trigger: CTTCTCGGAGTTCATGATCCAGAGTCCAGAGGCTGC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAACCGGTACAGCTCCTaGCCCACAAAATCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADNRYSS*PTKSSQ
Trigger: CTGGGAGGATTTTGTGGGCCAGGAGCTGTACCGGTT...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCATCTGCTAGCAGCCAGTaGCATCTCCATCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITASASSQ*HLHLGL
Trigger: CAGACCCAGATGGAGATGCCACTGGCTGCTAGCAGA...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCAAGATCAGCCAGGCCTaGTTGTATGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTKISQA*LYAPVI
Trigger: GATTACAGGTGCATACAACCAGGCCTGGCTGATCTT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CCAGAAGCACCACTTGGCTCAGATCCACCCAGATGCCAACTCTGTCGGGCCCCTCTGACCATACTCTTTTaGAAATTGAGAAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PEAPLGSDPPRCQLCRAPLTILF*KLRRKA
Trigger: TGCTTTCCTTCTCAATTTCCAAAAGAGTATGGTCAG...AGGGGCCCGACAGAGTTGGCATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp AAAAGAAGGAAGCTGGGAATGAAACTCAAAATGCACTaGAACCTGGAAGCGGCAACCCTCAGCTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: KRRKLGMKLKMH*NLEAATLSSAR
Trigger: CCGCGCAGAGCTGAGGGTTGCCGCTTCCAGGTTCAAGTGCATTTTGAGTTTCATTCCCAGCTTCCTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGTCTAAATTTGTCTCCTaGTCCAGTAGATGCTACAGC +
Preference number: 4 (lower is better)
Translates to: CDWESCPAACVPSVISSESKFVS*SSRCYS
Trigger: GCTGTAGCATCTACTGGAGCAGGAGACAAATTTAGA...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCACAAGAGTTCGTTTTGTaGCTGAGTTACTACTACAGG +
Preference number: 4 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQAQEFVL*LSYYYR
Trigger: CCTGTAGTAGTAACTCAGGCACAAAACGAACTCTTG...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATTCCTGGATGAGCTGCTaGAAGGAGTCGTGCACTTCG +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNSWMSC*KESCTS
Trigger: CGAAGTGCACGACTCCTTCCAGCAGCTCATCCAGGA...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATCTCGGCTGCGGCCAATaGTGCGGCTGGGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNLGCGQ*CGWACW
Trigger: CCAGCATGCCCAGCCGCACCATTGGCCGCAGCCGAG...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATCCTCCTCCAGGGCCGTaGGGTCCAGCTCCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNPPPGP*GPAPGR
Trigger: ACGACCTGGAGCTGGACCCCACGGCCCTGGAGGAGG...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATGGGGTTTTGCCATGCTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNGVLPC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAGCATGGCAAAACCCC...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp GCAGCTGCAATTACAGACAGGCGCCACCACCTCCAGCAAGTACCAGTGTTTTTACACCATTTCCACCCATaGGTGAAAAAGAGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: AAAITDRRHHLQQVPVFLHHFHP*VKKRLE
Trigger: CTCAAGCCTCTTTTTCACCCATGGGTGGAAATGGTG...TAAAAACACTGGTACTTGCTGGAGGTGGTGGCGCCTGTCTGTAATTGCAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGAAGGAAAGCATTGAGTaGGACCTAATCCGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLKESIE*DLIRRR
Trigger: TCTTCTCCGGATTAGGTCCCACTCAATGCTTTCCTT...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCATATGGATGTCTACTTTaGACGCTGCGATTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAYGCLL*TLRLGE
Trigger: CTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATA...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATTACGCAGGATCCACGTaGAAACAAAGCTGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADYAGST*KQSCLA
Trigger: AGCTAAGCAGCTTTGTTTCCACGTGGATCCTGCGTA...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp TCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTGCAGACCTGCCCTTTGTaGTTTGTGTTTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SPPPWPIQVCSSGNFCCLQTCPL*FVFLFV
Trigger: AACAAACAAAAACACAAACCACAAAGGGCAGGTCTG...CAGACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATCCTGGGGAACAAGAGTaGAACTCCATTCCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADPGEQE*NSIPRK
Trigger: TTTTCTTGGAATGGAGTTTCACTCTTGTTCCCCAGG...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATTTTCACCAAGCACTTTaGGCACAGTGGAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADFHQAL*AQWNFR
Trigger: TCTGAAGTTCCACTGTGCTCAAAGTGCTTGGTGAAA...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR GCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATGGTCTCGGCTCTCCTTaGCAAGGGAGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNGLGSP*QGSGKG
Trigger: CCCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACC...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATTGCCTCCCGAGTAGCTaGGACTACTGGTGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNCLPSS*DYWCAP
Trigger: TGGCGCACACCAGTAGTCCCAGCTACTCGGGAGGCA...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
3UTR CAA 72 bp TGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTaGGCAACATCACGGCAGAACGGTAAAGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: CPAFVVVVVAAI*ATSRQNGKGRK
Trigger: CTTTCTGCCTTTACCGTTCTGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
3UTR CAA 72 bp TGGCAGTTTCAGACCTGCCCTTTGTGGTTTGTGTTTTaGTTTGTTAATACAGGGTCTCTGTCTCCCACGCTG +
Preference number: 4 (lower is better)
Translates to: WQFQTCPLWFVF*FVNTGSLSPTL
Trigger: CAGCGTGGGAGACAGAGACCCTGTATTAACAAACAAAAACACAAACCACAAAGGGCAGGTCTGAAACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR TCA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATTACCTCTCTCACGAGTaGACTCAGATTTTCCATTGT +
Preference number: 4 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADYLSHE*TQIFHC
Trigger: ACAATGGAAAATCTGAGTTCACTCGTGAGAGAGGTA...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATCGCCAGAGTGTCTGCTaGCTACTTCCTGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNRQSVC*LLPVTS
Trigger: GGAGGTGACAGGAAGTAGCCAGCAGACACTCTGGCG...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR GCA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCATGTTGTTGTTGTTGCTaGTATTTTGGCAACATCACG +
Preference number: 4 (lower is better)
Translates to: VPSLCCCCCCCYFGNITACCCCC*YFGNIT
Trigger: CGTGATGTTGCCAAAATAGCAGCAACAACAACAACA...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATTCTTCCTCTGAAGGGTaGAGACACAGGGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNSSSEG*RHRALM
Trigger: CATCAGGGCCCTGTGTCTCCACCCTTCAGAGGAAGA...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CCA 90 bp ATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATCTAAAAATCCACACACCTGCAGATaGCCACGTACACCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: MPGHTHHFETCFPFQSKNPHTCR*PRTPPV
Trigger: TACTGGAGGTGTACGTGGCCATCTGCAGGTGTGTGG...ATTTTTAGATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS TCA 90 bp CGCCCGCAGGCACCGCAAACCTCGGGCCCACGCAGCACCCCCAGGTaGCTGTCAGCGGTACCTCCGGACTCGGGCGGGTGGGAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RPQAPQTSGPRSTPR*LSAVPPDSGGWEPG
Trigger: GCCAGGCTCCCACCCGCCCGAGTCCGGAGGTACCGCTGACAGTCACCTGGGGGTGCTGCGTGGGCCCGAGGTTTGCGGTGCCTGCGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587480.1
CDS CCA 90 bp CAGGTGACTGTCAGCGGTACCTCCGGACTCGGGCGGGTGGGAGCCTaGCGGGCACCCCACGCCGTCCGGTGGGCCCGCCCTTGGACTCTC +
Preference number: 5 (lower is better)
Translates to: QVTVSGTSGLGRVGA*RAPHAVRWARPWTL
Trigger: GAGAGTCCAAGGGCGGGCCCACCGGACGGCGTGGGGTGCCCGCCAGGCTCCCACCCGCCCGAGTCCGGAGGTACCGCTGACAGTCACCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587480.1
CDS TCA 90 bp CGCGCAGCCAGGGCTCACCTGTGCCCCGCAAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGCCAAGGGAGTGGCAAAGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RAARAHLCPARAAGN*GLGSPCQGSGKGPQ
Trigger: CTGGGGCCCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCTTGCGGGGCACAGGTGAGCCCTGGCTGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000586697.5
ENST00000588087.5
ENST00000588792.5
ENST00000589553.5
ENST00000590602.6
ENST00000592063.5
CDS GCA 90 bp GGTAGGCCAGGGGCATGTTGTAGGGCAGGCCACCCACCCTGGGTGTaGACTGGCTGCCATCCAGGGGGCTGCCACACGGCTGGTTCAGCG +
Preference number: 5 (lower is better)
Translates to: GRPGACCRAGHPPWV*TGCHPGGCHTAGSA
Trigger: CGCTGAACCAGCCGTGTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGTGGGTGGCCTGCCCTACAACATGCCCCTGGCCTACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000585849.1
ENST00000588087.5
ENST00000589553.5
ENST00000590602.6
ENST00000593044.5
CDS CCA 90 bp TGGAGAGGTAGGCCAGGGGCATGTTGTAGGGCAGGCCACCCACCCTaGGTGTGCACTGGCTGCCATCCAGGGGGCTGCCACACGGCTGGT +
Preference number: 5 (lower is better)
Translates to: WRGRPGACCRAGHPP*VCTGCHPGGCHTAG
Trigger: ACCAGCCGTGTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGTGGGTGGCCTGCCCTACAACATGCCCCTGGCCTACCTCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000585849.1
ENST00000588087.5
ENST00000589553.5
ENST00000590602.6
ENST00000593044.5
CDS GCA 90 bp GCAGGCCACCCACCCTGGGTGTGCACTGGCTGCCATCCAGGGGGCTaGCACACGGCTGGTTCAGCGTGGCGTTACTGTAGTGGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: AGHPPWVCTGCHPGG*HTAGSAWRYCSGRS
Trigger: ACTACGGCCACTACAGTAACGCCACGCTGAACCAGCCGTGTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGTGGGTGGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000585849.1
ENST00000588087.5
ENST00000589553.5
ENST00000590602.6
ENST00000593044.5
CDS TCA 90 bp TGTCCACACCACCCATTCCTGTGCCCCGCAAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGCCAAGGGAGTGGCAAAGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CPHHPFLCPARAAGN*GLGSPCQGSGKGPQ
Trigger: CTGGGGCCCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCTTGCGGGGCACAGGAATGGGTGGTGTGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589271.5
CDS TCA 90 bp TGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATaGTGGCACCTCGGCTGCGGCCTATGGAGGCAGCTGGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: CSCTEAAPCGCSTGR*WHLGCGLWRQLGRA
Trigger: GGCCCTGCCCAGCTGCCTCCATAGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593044.5
CDS GCA 90 bp GGCGACCAGGGCTGTGCGTCCAGGCAGAGCCTGGACCCTGCTCCCTaGAGCCTCCTCATTTACAGAGGAAGACAGAAGCCTGCCGGTCAC +
Preference number: 5 (lower is better)
Translates to: GDQGCASRQSLDPAP*SLLIYRGRQKPAGH
Trigger: GTGACCGGCAGGCTTCTGTCTTCCTCTGTAAATGAGGAGGCTGCAGGGAGCAGGGTCCAGGCTCTGCCTGGACGCACAGCCCTGGTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589933.1
CDS CCA 90 bp GCCCTGGTCCCCTGGGGTCTCAGGGACATCGAGGATGAAGGCCAGTaGCTGGGCCATGTCTCTGGCCAATGCCCGCTAGTCTGCAGACCT +
Preference number: 5 (lower is better)
Translates to: ALVPWGLRDIEDEGQ*LGHVSGQCPLVCRP
Trigger: AGGTCTGCAGACTAGCGGGCATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCATCCTCGATGTCCCTGAGACCCCAGGGGACCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000586126.1
ENST00000588087.5
ENST00000588792.5
ENST00000589271.5
ENST00000590162.1
ENST00000590602.6
ENST00000592063.5
ENST00000592594.5
ENST00000593044.5
CDS CCA 90 bp AGGGGTGGTCTTCAACGCCTGGCAGCTGTCCACACCACCCATTCCTaGGGGAACCACAGGAGGTGCCACTCACAGCCCAGACAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: RGGLQRLAAVHTTHS*GNHRRCHSQPRQSR
Trigger: GCGGGACTGTCTGGGCTGTGAGTGGCACCTCCTGTGGTTCCCCCAGGAATGGGTGGTGTGGACAGCTGCCAGGCGTTGAAGACCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392467.7
CDS-3UTR CAA 90 bp AGAACCTCCCGGCCACACGTCCCGGCCACTAAGGGGAGAACACTCACCACCCAGAGCCGGGTGCGAATATaGTCCTGCTGGAGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: RTSRPHVPATKGRTLTTQSRVRI*SCWRRE
Trigger: CTCCCGCCTCCAGCAGGACAATATTCGCACCCGGCT...CTGGGTGGTGAGTGTTCTCCCCTTAGTGGCCGGGACGTGTGGCCGGGAGGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CAA 90 bp CAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGACAGGAACTGTGGGGTTaGGGACACAGGCTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: QGPAAPAPKLHRAVVVLGQELWG*GHRLFR
Trigger: CCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCTG...TCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS TCA 90 bp TCCTGGATGAGCCCTGGTCCCCTGGGGTCTCAGGGACATCGAGGATaGAGGCCAGTGGCTGGGCCATGTCTCTGGCCAATGCCCGCTAGT +
Preference number: 5 (lower is better)
Translates to: SWMSPGPLGSQGHRG*RPVAGPCLWPMPAS
Trigger: ACTAGCGGGCATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCATCCTCGATGTCCCTGAGACCCCAGGGGACCAGGGCTCATCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS GCA 90 bp GACATCGAGGATGAAGGCCAGTGGCTGGGCCATGTCTCTGGCCAATaGCCGCTAGTCTGCAGACCTAGGGTAGCTCAGAGCCTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: DIEDEGQWLGHVSGQ*PLVCRPRVAQSLGA
Trigger: GGCGCCCAGGCTCTGAGCTACCCTAGGTCTGCAGACTAGCGGGCATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCATCCTCGATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000586126.1
ENST00000588087.5
ENST00000588792.5
ENST00000589271.5
ENST00000590162.1
ENST00000590602.6
ENST00000592063.5
ENST00000592594.5
ENST00000593044.5
CDS GCA 90 bp CCTAGAAGAGGGGGCAGGGCTGCATTCACCGCGGACTTGGCTGGCTaGCTCCCAGCGAGACATGGACCAGAAGATGCTGGGCTCACCTCA +
Preference number: 5 (lower is better)
Translates to: PRRGGRAAFTADLAG*LPARHGPEDAGLTS
Trigger: TGAGGTGAGCCCAGCATCTTCTGGTCCATGTCTCGCTGGGAGGCAGCCAGCCAAGTCCGCGGTGAATGCAGCCCTGCCCCCTCTTCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592076.5
CDS CCA 90 bp GGCTGCATTCACCGCGGACTTGGCTGGCTGCCTCCCAGCGAGACATaGACCAGAAGATGCTGGGCTCACCTCAGGGCCTTTGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: GCIHRGLGWLPPSET*TRRCWAHLRAFALL
Trigger: CAGCAGTGCAAAGGCCCTGAGGTGAGCCCAGCATCTTCTGGTCCATGTCTCGCTGGGAGGCAGCCAGCCAAGTCCGCGGTGAATGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592076.5
CDS-3UTR CAA 90 bp GTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTGGGCATGCTGGGGTGCAGCAGGTCTaGGCTTTCTTTGCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: VLGDDGTSAAANGAAGHAGVQQV*AFFACA
Trigger: GGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCC...AGCATGCCCAGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS GCA 90 bp GAATTGTCTCTCCTTGGGGTGACGGTGGGCCCAGGCACAGGTGGATaGGGGGTGCAGCAGGTCTTGGCTTTCTTTGCCTGTGCCGGTCCA +
Preference number: 5 (lower is better)
Translates to: ELSLLGVTVGPGTGG*GVQQVLAFFACAGP
Trigger: TGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGGCCCACCGTCACCCCAAGGAGAGACAATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CCA 90 bp ACAGATGGGGAGACTGAGGCCGTGGCTGTGTGTCCCTCTGAGAGTTaGAGCGGGGCTGGGCCCGAATTCGACCGCAGCAGGATTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TDGETEAVAVCPSES*SGAGPEFDRSRILS
Trigger: AGAGAGAATCCTGCTGCGGTCGAATTCGGGCCCAGCCCCGCTCCAACTCTCAGAGGGACACACAGCCACGGCCTCAGTCTCCCCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CCA 90 bp GAAGGGCAAACTGCCACGTGGAGAAGAGAGGGAATTGTCTCTCCTTaGGGTGACGGTGGGCCCAGGCACAGGTGGATGCGGGGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: EGQTATWRREGIVSP*GDGGPRHRWMRGAA
Trigger: TGCTGCACCCCGCATCCACCTGTGCCTGGGCCCACCGTCACCCCAAGGAGAGACAATTCCCTCTCTTCTCCACGTGGCAGTTTGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CAA 90 bp CGGACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGGATCTTTCACCCCATTaGACAGATGGGGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: RTKFPSRGRLLLHRSCTVDLSPH*TDGETE
Trigger: CTCAGTCTCCCCATCTGTCAAATGGGGTGAAAGATC...CACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CAA 90 bp AGGTGTTCACCACATTCCAGCAGCACACGATCACAGCAACACCTCGGCCCCTCTGCCTGCTCGGCTCACTaGTGCAGGTGTAAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: RCSPHSSSTRSQQHLGPSACSAH*CRCKPL
Trigger: GAGGGGCTTACACCTGCACAAGTGAGCCGAGCAGGC...AGAGGGGCCGAGGTGTTGCTGTGATCGTGTGCTGCTGGAATGTGGTGAACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGGCCACCGGGTTGGCATaGGTGTTACAGACAGGCCTC +
Preference number: 5 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMATGLA*VLQTGL
Trigger: GAGGCCTGTCTGTAACACCAATGCCAACCCGGTGGC...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp ACAAAGTTCCCGAGCAGGGGCCGGCTGCTCCTGCACCGAAGCTGCACCGTGCGGGACTTTCTGTGCCCTTaGGATCTTTCACCCCATTTG +
Preference number: 5 (lower is better)
Translates to: TKFPSRGRLLLHRSCTVRDFLCP*DLSPHL
Trigger: CAAATGGGGTGAAAGATCCAAAGGGCACAGAAAGTC...CCGCACGGTGCAGCTTCGGTGCAGGAGCAGCCGGCCCCTGCTCGGGAACTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CAA 90 bp GCGGTTGTAGTACTGGGAGATGATGGCACCTCGGCTGCGGCCAATGGTGCGGCTGGAGAAGAGAGGGAATaGTCTCTCCTTGGGGTGACG +
Preference number: 5 (lower is better)
Translates to: AVVVLGDDGTSAAANGAAGEERE*SLLGVT
Trigger: CGTCACCCCAAGGAGAGACAATTCCCTCTCTTCTCC...AGCCGCACCATTGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS GCA 90 bp CCCAGGCACAGGTGGATGCGGGGTGCAGCAGGTCTTGGCTTTCTTTaGCTGTGCCGGTCCAGACTTTCTGTGCCCTTTGGATCTTTCACC +
Preference number: 5 (lower is better)
Translates to: PRHRWMRGAAGLGFL*LCRSRLSVPFGSFT
Trigger: GGTGAAAGATCCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CCA 90 bp CAGAGTCAGATGTGGCAGATGCCGAGTCCCAGGAACTGTGGGGTTTaGGACACAGGCTCTTCCGGAAGGGCAAACTGCCACGTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QSQMWQMPSPRNCGV*DTGSSGRANCHVEK
Trigger: CTTCTCCACGTGGCAGTTTGCCCTTCCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCTGGGACTCGGCATCTGCCACATCTGACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CCA 90 bp CGACATCCAGAGTCAGATGTGGCAGATGCCGAGTCCCAGGAACTGTaGGGTTTGGGACACAGGCTCTTCCGGAAGGGCAAACTGCCACGT +
Preference number: 5 (lower is better)
Translates to: RHPESDVADAESQEL*GLGHRLFRKGKLPR
Trigger: ACGTGGCAGTTTGCCCTTCCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCTGGGACTCGGCATCTGCCACATCTGACTCTGGATGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CAA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAAGCCGGGTGCGAATATaGTCCTGCTGGAGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPSRVRI*SCWRRE
Trigger: CTCCCGCCTCCAGCAGGACAATATTCGCACCCGGCT...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGATCAGCACCAGCTACTaGCTGAGGCCCAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQISTSY*LRPRST
Trigger: GGTGCTTCTGGGCCTCAGCAAGTAGCTGGTGCTGAT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GTGCCCAGCCTTTGTTGTTGTTGTTGTTGCTGCTATTTTGGCAACATCACGGCACCTGCCATCTGGGGCTaGGCCAGCAGAGGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: VPSLCCCCCCCYFGNITAPAIWG*ASRGRP
Trigger: GGGGCGCCCTCTGCTGGCCAAGCCCCAGATGGCAGG...TGCCGTGATGTTGCCAAAATAGCAGCAACAACAACAACAACAAAGGCTGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp ACGGCAGCAAGAAGATGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACGTCCCCACAACTCATTaGCAACTGATATGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: TAARRCRGLPGVLAEECHVPTTH*QLICLP
Trigger: GGGGAGACATATCAGTTGCAAATGAGTTGTGGGGAC...GTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCATCTTCTTGCTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GCTGCTCCTGCACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATGATGGCAGGTCTTGGCTTTCTTaGCCTGTGCCGGTCCAGACT +
Preference number: 5 (lower is better)
Translates to: AAPAPKLHRAVVVLGDDGRSWLS*PVPVQT
Trigger: AGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCT...GCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGTGCAGGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS TCA 90 bp TACAGAGGAAGACAGAAGCCTGCCGGTCACTTGCACGCAAACGGGTaGTGCCAACAGCACCTCCATCTGCTGAAGGTCGCTGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: YRGRQKPAGHLHANG*CQQHLHLLKVAAMP
Trigger: TGGCATGGCAGCGACCTTCAGCAGATGGAGGTGCTGTTGGCATCACCCGTTTGCGTGCAAGTGACCGGCAGGCTTCTGTCTTCCTCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589933.1
CDS-3UTR CAA 90 bp GCTCTCATCGAGCAAACATGGCCTCCTTGCAACACCTCAAATGGGTGCCAGGCAAGGTCTCGGCTCTCCTaGCCAAGGGAGTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: ALIEQTWPPCNTSNGCQARSRLS*PREWQR
Trigger: CCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCT...TGCCTGGCACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGCTCGATGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGCGGCTCACTGCAACCTaGACCTCAAGGTTAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQRLTAT*TSRLSS
Trigger: GGAGCTTAACCTTGAGGTCAAGGTTGCAGTGAGCCG...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGGTCAGTGCCACCGGGTaGGCATTGGTGTTACAGACA +
Preference number: 5 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQVSATG*ALVLQT
Trigger: TGTCTGTAACACCAATGCCAACCCGGTGGCACTGAC...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGCCCAGAAGCACCACTaGGCTCAGATCCACCCAGAT +
Preference number: 5 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPAQKHH*AQIHPD
Trigger: ATCTGGGTGGATCTGAGCCAAGTGGTGCTTCTGGGC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp CTCTGCAGGAGTGCGGTGTCTACGGATGGACCAAGAAAACCTACGCAGGATCCAGAGTGCCACTCACTTTaGCCTAGGGTCCAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LCRSAVSTDGPRKPTQDPECHSL*PRVQLG
Trigger: CCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTC...TGGATCCTGCGTAGGTTTTCTTGGTCCATCCGTAGACACCGCACTCCTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTTGGGCCCATCGCTCTTaGACCATTTCCCCACCTGGG +
Preference number: 5 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTWAHRS*TISPPG
Trigger: CCCAGGTGGGGAAATGGTCAAAGAGCGATGGGCCCA...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS GCA 90 bp CACAGGTGGATGCGGGGTGCAGCAGGTCTTGGCTTTCTTTGCCTGTaGCGGTCCAGACTTTCTGTGCCCTTTGGATCTTTCACCCCATTT +
Preference number: 5 (lower is better)
Translates to: HRWMRGAAGLGFLCL*RSRLSVPFGSFTPF
Trigger: AAATGGGGTGAAAGATCCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS-3UTR CAA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTTGTTGGGACAGGGTCTaGCCATTGCCCGTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCCWDRV*PLPVLD
Trigger: ATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCCTTTGCACGCTGCGATaGGGAGAGCTGTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: SKDTMDVYFARCDWESCPLCTLR*GELSRC
Trigger: GCAGCGGGACAGCTCTCCCAATCGCAGCGTGCAAAG...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTAGGGACCGTGATGGTTaGGAGGACAGCATCTGCACA +
Preference number: 5 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTRDRDG*EDSICT
Trigger: TGTGCAGATGCTGTCCTCCAAACCATCACGGTCCCT...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGCACAAACTGTGTCACTaGATACAGCGGCCCCATGAG +
Preference number: 5 (lower is better)
Translates to: CDWESCPAACVPSVISSEHKLCH*IQRPHE
Trigger: CTCATGGGGCCGCTGTATCAAGTGACACAGTTTGTG...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp AGACAGTGGGGCATCCCGAGAAGATCCTCTGCAGGAGTGCGGTGTCTACGGATGAATAAACCGAAACTCTaGGGCTCAAGCAATCCTCCG +
Preference number: 5 (lower is better)
Translates to: RQWGIPRRSSAGVRCLRMNKPKL*GSSNPP
Trigger: CGGAGGATTGCTTGAGCCCAAGAGTTTCGGTTTATT...CATCCGTAGACACCGCACTCCTGCAGAGGATCTTCTCGGGATGCCCCACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GCAACACCTCAAATGGGTGCCAGGCATGGTACGCAGCACACAAACTGTGTCACTAGCATCACCCAATGGTaGACGCATCGCTCTGGTCAC +
Preference number: 5 (lower is better)
Translates to: ATPQMGARHGTQHTNCVTSITQW*THRSGH
Trigger: GTGACCAGAGCGATGCGTCAACCATTGGGTGATGCT...AGTGACACAGTTTGTGTGCTGCGTACCATGCCTGGCACCCATTTGAGGTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GGCGCGAGTTCAGGCTGGTCAAAGGCAGCAAGCGAATCAAGCCCTGGCGCGGTCTCTGACCATACTCTTTaGGAAATTGAGAAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: GASSGWSKAASESSPGAVSDHTL*EIEKES
Trigger: GCTTTCCTTCTCAATTTCCAAAAGAGTATGGTCAGA...GACCGCGCCAGGGCTTGATTCGCTTGCTGCCTTTGACCAGCCTGAACTCGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GGCCTTCAGGGTGACCAGTCAGTGCCACCGGGTTGGCATTGGTGTTACAGACAGAAGGGACAAGCCCATTaGCAAAACCCCTTTAATCAG +
Preference number: 5 (lower is better)
Translates to: GLQGDQSVPPGWHWCYRQKGQAH*QNPFNQ
Trigger: CTGATTAAAGGGGTTTTGCAAATGGGCTTGTCCCTT...CTGTCTGTAACACCAATGCCAACCCGGTGGCACTGACTGGTCACCCTGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp TGTTGGGACAGGGTCTTGCCATTGCCCGTGCTGGATTCAAAACACCTGGGCTCGCTTTCACCAAGCACTTaGAGCACAGTGGAACTTCAG +
Preference number: 5 (lower is better)
Translates to: CWDRVLPLPVLDSKHLGSLSPST*STVELQ
Trigger: CTGAAGTTCCACTGTGCTCAAAGTGCTTGGTGAAAG...CGAGCCCAGGTGTTTTGAATCCAGCACGGGCAATGGCAAGACCCTGTCCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS TCA 90 bp GGCCAAAGTGAAAAGGGAAATGTAATCAGCAGCCCAGAGCCAGCCTaGCTCAATTTAAAACCAGCCCTGCCACGTACTGGCTCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GQSEKGNVISSPEPA*LNLKPALPRTGSAL
Trigger: CAAGGCAGAGCCAGTACGTGGCAGGGCTGGTTTTAAATTGAGTCAGGCTGGCTCTGGGCTGCTGATTACATTTCCCTTTTCACTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590494.1
CDS-3UTR CAA 90 bp GAGCCACCATGCCTGGCCATACACATCACTTTGAAACCTGTTTTCCTTTCCAATAGGTCTCGGCTCTCCTaGCCAAGGGAGTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: EPPCLAIHITLKPVFLSNRSRLS*PREWQR
Trigger: CCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCT...ATTGGAAAGGAAAACAGGTTTCAAAGTGATGTGTATGGCCAGGCATGGTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589553.5
CDS-3UTR CAA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCGGTGCCCAGCCTTTGTaGTTGTTGTTGTTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTGAQPL*LLLLLL
Trigger: TAGCAGCAACAACAACAACAACAAAGGCTGGGCACC...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTCTATGGATGTCTACTTaGCACGCTGCGATTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCLWMST*HAAIGR
Trigger: TCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAG...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATGCCTGGGAGACCAGGTaGGATTTTGACAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADAWETR*DFDRLG
Trigger: TCCCAGTCTGTCAAAATCCAACCTGGTCTCCCAGGC...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATGCAAACATGGCCTCCTaGCAACACCTCAAATGGGTG +
Preference number: 5 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADANMAS*QHLKWV
Trigger: CACCCATTTGAGGTGTTGCAAGGAGGCCATGTTTGC...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp GGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAGGATGAGGCCCACCAAGCATCGCGGAGTCTaGTCATTCAGCCTGAAAATA +
Preference number: 5 (lower is better)
Translates to: GTPRVLLLKLSADRMRPTKHRGV*SFSLKI
Trigger: TATTTTCAGGCTGAATGACAAGACTCCGCGATGCTT...GGTGGGCCTCATCCTATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATGTTGTTGCTGCTATTTaGGCAACATCACGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADVVAAI*ATSRQN
Trigger: GTTCTGCCGTGATGTTGCCAAAATAGCAGCAACAAC...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCGCCCAGCCTTTGTTGTaGTTGTTGTTGCTGCTATTT +
Preference number: 5 (lower is better)
Translates to: SKDTMDVYFARCDWESCPAQPLL*LLLLLF
Trigger: AAATAGCAGCAACAACAACAACAACAAAGGCTGGGC...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp TGCGATTGGGAGAGCTGTCCCGCTGCATGCGTTCCCTCTGTAATTTCCTCAGAGGGTTTGTGTTTTTGTTaGTTAATACAGGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: CDWESCPAACVPSVISSEGLCFC*LIQGLC
Trigger: ACAGAGACCCTGTATTAACAAACAAAAACACAAACC...CTCTGAGGAAATTACAGAGGGAACGCATGCAGCGGGACAGCTCTCCCAATCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp AGCTCTCCACCCCCGTGGCCCATCCAAGTCTGTTCATCTGGTAACTTCTGTTGTTTTCAGACCTGCCCTTaGTGGTTTGTGTTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: SSPPPWPIQVCSSGNFCCFQTCP*WFVFLF
Trigger: AAACAAAAACACAAACCACAAAGGGCAGGTCTGAAA...ACAACAGAAGTTACCAGATGAACAGACTTGGATGGGCCACGGGGGTGGAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp TCAAAAGACACTATGGATGTCTACTTTGCACGCTGCGATTGGGAGAGCTGTCCCCAGCAAGAGTTCGTTTaGTGCCTGAGTTACTACTAC +
Preference number: 5 (lower is better)
Translates to: SKDTMDVYFARCDWESCPQQEFV*CLSYYY
Trigger: GTAGTAGTAACTCAGGCACAAAACGAACTCTTGCTG...GGGACAGCTCTCCCAATCGCAGCGTGCAAAGTAGACATCCATAGTGTCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS-3UTR CAA 90 bp CAGAATTCCCTCTCTGGGACACCTCGGGTTTTGCTCTTAAAGCTTTCAGCTGATAAACTCAAAATGCACTaGAACCTGGAAGCGGCAACC +
Preference number: 5 (lower is better)
Translates to: QNSLSGTPRVLLLKLSADKLKMH*NLEAAT
Trigger: GGTTGCCGCTTCCAGGTTCAAGTGCATTTTGAGTTT...ATCAGCTGAAAGCTTTAAGAGCAAAACCCGAGGTGTCCCAGAGAGGGAATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590602.6
CDS TCA 72 bp GCACCGCAAACCTCGGGCCCACGCAGCACCCCCAGGTaGCTGTCAGCGGTACCTCCGGACTCGGGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: APQTSGPRSTPR*LSAVPPDSGGW
Trigger: CCACCCGCCCGAGTCCGGAGGTACCGCTGACAGTCACCTGGGGGTGCTGCGTGGGCCCGAGGTTTGCGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587480.1
CDS GCA 72 bp TGTAGGGCAGGCCACCCACCCTGGGTGTGCACTGGCTaGCATCCAGGGGGCTGCCACACGGCTGGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: CRAGHPPWVCTG*HPGGCHTAGSA
Trigger: CGCTGAACCAGCCGTGTGGCAGCCCCCTGGATGGCAGCCAGTGCACACCCAGGGTGGGTGGCCTGCCCTACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000585849.1
ENST00000588087.5
ENST00000589553.5
ENST00000590602.6
ENST00000593044.5
CDS CAA 72 bp CGCAAGAGCCGCCGGGAACTGAGGTCTCGGCTCTCCTaGCCAAGGGAGTGGCAAAGGGCCCCAGGGGCGACT +
Preference number: 6 (lower is better)
Translates to: RKSRRELRSRLS*PREWQRAPGAT
Trigger: AGTCGCCCCTGGGGCCCTTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCTTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000586697.5
ENST00000588792.5
ENST00000589271.5
ENST00000589553.5
ENST00000590602.6
ENST00000592063.5
ENST00000593044.5
CDS GCA 72 bp AGCTTGGTGCTCCGGGGCCACTCACCTTCAGCCGGGTaGGAATATTGTCCTGCTGGAGGCGGGAGGCCCGCT +
Preference number: 6 (lower is better)
Translates to: SLVLRGHSPSAG*EYCPAGGGRPA
Trigger: AGCGGGCCTCCCGCCTCCAGCAGGACAATATTCGCACCCGGCTGAAGGTGAGTGGCCCCGGAGCACCAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585849.1
CDS CCA 72 bp GACAGGGGCACAGAGCCAGGGGTGGTCTTCAACGCCTaGCAGCTGTCCACACCACCCATTCCTGGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: DRGTEPGVVFNA*QLSTPPIPGRR
Trigger: GCGCCTCCCAGGAATGGGTGGTGTGGACAGCTGCCAGGCGTTGAAGACCACCCCTGGCTCTGTGCCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592063.5
CDS CCA 72 bp GAGACTGAGGCCGTGGCTGTGTGTCCCTCTGAGAGTTaGAGCGGGGCTGGGCCCGAATTCGACCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ETEAVAVCPSES*SGAGPEFDRSR
Trigger: CCTGCTGCGGTCGAATTCGGGCCCAGCCCCGCTCCAACTCTCAGAGGGACACACAGCCACGGCCTCAGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS TCA 72 bp AGCCCCCATCTGTGCCCCGCAAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGCCAAGGGAGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: SPHLCPARAAGN*GLGSPCQGSGK
Trigger: TTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCTTGCGGGGCACAGATGGGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593044.5
CDS TCA 72 bp AGGGCTCACCTGTGCCCCGCAAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGCCAAGGGAGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: RAHLCPARAAGN*GLGSPCQGSGK
Trigger: TTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCTTGCGGGGCACAGGTGAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586697.5
ENST00000588087.5
ENST00000588792.5
ENST00000589553.5
ENST00000590602.6
ENST00000592063.5
CDS CCA 72 bp CTGGGCCGTGCACTGGCTCTGCTCCTGGATGAGCCCTaGTCCCCTGGGGTCTCAGGGACATCGAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: LGRALALLLDEP*SPGVSGTSRMK
Trigger: CTTCATCCTCGATGTCCCTGAGACCCCAGGGGACCAGGGCTCATCCAGGAGCAGAGCCAGTGCACGGCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS TCA 72 bp CACCCATTCCTGTGCCCCGCAAGAGCCGCCGGGAACTaGGGTCTCGGCTCTCCTTGCCAAGGGAGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: HPFLCPARAAGN*GLGSPCQGSGK
Trigger: TTTGCCACTCCCTTGGCAAGGAGAGCCGAGACCTCAGTTCCCGGCGGCTCTTGCGGGGCACAGGAATGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589271.5
CDS GCA 72 bp CTCCTTGGGGTGACGGTGGGCCCAGGCACAGGTGGATaGGGGGTGCAGCAGGTCTTGGCTTTCTTTGCCTGT +
Preference number: 6 (lower is better)
Translates to: LLGVTVGPGTGG*GVQQVLAFFAC
Trigger: ACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGGCCCACCGTCACCCCAAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CCA 72 bp CCCTGGGGTCTCAGGGACATCGAGGATGAAGGCCAGTaGCTGGGCCATGTCTCTGGCCAATGCCCGCTAGTC +
Preference number: 6 (lower is better)
Translates to: PWGLRDIEDEGQ*LGHVSGQCPLV
Trigger: GACTAGCGGGCATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCATCCTCGATGTCCCTGAGACCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000586126.1
ENST00000588087.5
ENST00000588792.5
ENST00000589271.5
ENST00000590162.1
ENST00000590602.6
ENST00000592063.5
ENST00000592594.5
ENST00000593044.5
CDS CCA 72 bp CACCGCGGACTTGGCTGGCTGCCTCCCAGCGAGACATaGACCAGAAGATGCTGGGCTCACCTCAGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: HRGLGWLPPSET*TRRCWAHLRAF
Trigger: AAAGGCCCTGAGGTGAGCCCAGCATCTTCTGGTCCATGTCTCGCTGGGAGGCAGCCAGCCAAGTCCGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592076.5
CDS CAA 90 bp GTGACGGTGGGCCCAGGCACAGGTGGATGCGGGGTGCAGCAGGTCTaGGCTTTCTTTGCCTGTGCCGGTCCAGACTTTCTGTGCCCTTTG +
Preference number: 6 (lower is better)
Translates to: VTVGPGTGGCGVQQV*AFFACAGPDFLCPL
Trigger: CAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGGCCCACCGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS TCA 72 bp ACCGAAGCTGCACCGTGCGGTTGTAGTACTGGGAGATaGTGGCACCTCGGCTGCGGCCTATGGAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: TEAAPCGCSTGR*WHLGCGLWRQL
Trigger: CAGCTGCCTCCATAGGCCGCAGCCGAGGTGCCATCATCTCCCAGTACTACAACCGCACGGTGCAGCTTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593044.5
CDS CCA 72 bp CTTCAACGCCTGGCAGCTGTCCACACCACCCATTCCTaGGGGAACCACAGGAGGTGCCACTCACAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: LQRLAAVHTTHS*GNHRRCHSQPR
Trigger: TCTGGGCTGTGAGTGGCACCTCCTGTGGTTCCCCCAGGAATGGGTGGTGTGGACAGCTGCCAGGCGTTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392467.7
CDS CCA 72 bp GGCCTTGGCCACAGCAATCTTGGGCCTCCAGCCCCATaGGAACCCCAGCACGATGAGCATCCAGGGTCATTG +
Preference number: 6 (lower is better)
Translates to: GLGHSNLGPPAP*EPQHDEHPGSL
Trigger: CAATGACCCTGGATGCTCATCGTGCTGGGGTTCCCATGGGGCTGGAGGCCCAAGATTGCTGTGGCCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586271.1
CDS CCA 72 bp ACTGCCACGTGGAGAAGAGAGGGAATTGTCTCTCCTTaGGGTGACGGTGGGCCCAGGCACAGGTGGATGCGG +
Preference number: 6 (lower is better)
Translates to: TATWRREGIVSP*GDGGPRHRWMR
Trigger: CCGCATCCACCTGTGCCTGGGCCCACCGTCACCCCAAGGAGAGACAATTCCCTCTCTTCTCCACGTGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 72 bp GGCCCAGGCACAGGTGGATGCGGGGTGCAGCAGGTCTaGGCTTTCTTTGCCTGTGCCGGTCCAGACTTTCTG +
Preference number: 6 (lower is better)
Translates to: GPGTGGCGVQQV*AFFACAGPDFL
Trigger: CAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 90 bp TGCCGGGGCTTGCCTGGAGTCCTGGCAGAGGAGTGCCACTCACTTTaGCCTAGGGTCCAGTTGGGGCATGTTGCCCAGGCTGATCTCGAA +
Preference number: 6 (lower is better)
Translates to: CRGLPGVLAEECHSL*PRVQLGHVAQADLE
Trigger: TTCGAGATCAGCCTGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAAGCCCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589217.1
CDS CAA 90 bp AGGCTCTTCCGGAAGGGCAAACTGCCACGTGGAGAAGAGAGGGAATaGTCTCTCCTTGGGGTGACGGTGGGCCCAGGCACAGGTGGATGC +
Preference number: 6 (lower is better)
Translates to: RLFRKGKLPRGEERE*SLLGVTVGPGTGGC
Trigger: GCATCCACCTGTGCCTGGGCCCACCGTCACCCCAAGGAGAGACAATTCCCTCTCTTCTCCACGTGGCAGTTTGCCCTTCCGGAAGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS GCA 72 bp GATGAAGGCCAGTGGCTGGGCCATGTCTCTGGCCAATaGCCGCTAGTCTGCAGACCTAGGGTAGCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: DEGQWLGHVSGQ*PLVCRPRVAQS
Trigger: GCTCTGAGCTACCCTAGGTCTGCAGACTAGCGGGCATTGGCCAGAGACATGGCCCAGCCACTGGCCTTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000306591.11
ENST00000322914.7
ENST00000392467.7
ENST00000586126.1
ENST00000588087.5
ENST00000588792.5
ENST00000589271.5
ENST00000590162.1
ENST00000590602.6
ENST00000592063.5
ENST00000592594.5
ENST00000593044.5
CDS GCA 72 bp TGCCTGGAGTCCTGGCAGAGGAGTGCCACTCACTTTTaGCTAGGGTCCAGTTGGGGCATGTTGCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CLESWQRSATHF*LGSSWGMLPRL
Trigger: CAGCCTGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589217.1
CDS GCA 72 bp GGCTGTGCGTCCAGGCAGAGCCTGGACCCTGCTCCCTaGAGCCTCCTCATTTACAGAGGAAGACAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: GCASRQSLDPAP*SLLIYRGRQKP
Trigger: AGGCTTCTGTCTTCCTCTGTAAATGAGGAGGCTGCAGGGAGCAGGGTCCAGGCTCTGCCTGGACGCACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589933.1
CDS CCA 72 bp GCCCAGGCACAGGTGGATGCGGGGTGCAGCAGGTCTTaGCTTTCTTTGCCTGTGCCGGTCCAGACTTTCTGT +
Preference number: 6 (lower is better)
Translates to: AQAQVDAGCSRS*LSLPVPVQTFC
Trigger: ACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 72 bp CGGAAGGGCAAACTGCCACGTGGAGAAGAGAGGGAATaGTCTCTCCTTGGGGTGACGGTGGGCCCAGGCACA +
Preference number: 6 (lower is better)
Translates to: RKGKLPRGEERE*SLLGVTVGPGT
Trigger: TGTGCCTGGGCCCACCGTCACCCCAAGGAGAGACAATTCCCTCTCTTCTCCACGTGGCAGTTTGCCCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CCA 72 bp ATGTGGCAGATGCCGAGTCCCAGGAACTGTGGGGTTTaGGACACAGGCTCTTCCGGAAGGGCAAACTGCCAC +
Preference number: 6 (lower is better)
Translates to: MWQMPSPRNCGV*DTGSSGRANCH
Trigger: GTGGCAGTTTGCCCTTCCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCTGGGACTCGGCATCTGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 72 bp TTGCCTGGAGTCCTGGCAGAGGAGTGCCACTCACTTTaGCCTAGGGTCCAGTTGGGGCATGTTGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LPGVLAEECHSL*PRVQLGHVAQA
Trigger: AGCCTGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589217.1
CDS CAA 72 bp CAGGTGGATGCGGGGTGCAGCAGGTCTTGGCTTTCTTaGCCTGTGCCGGTCCAGACTTTCTGTGCCCTTTGG +
Preference number: 6 (lower is better)
Translates to: QVDAGCSRSWLS*PVPVQTFCALW
Trigger: CCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 72 bp GATGTGGCAGATGCCGAGTCCCAGGAACTGTGGGGTTaGGGACACAGGCTCTTCCGGAAGGGCAAACTGCCA +
Preference number: 6 (lower is better)
Translates to: DVADAESQELWG*GHRLFRKGKLP
Trigger: TGGCAGTTTGCCCTTCCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCTGGGACTCGGCATCTGCCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 90 bp GCCCAGGCACAGGTGGATGCGGGGTGCAGCAGGTCTTGGCTTTCTTaGCCTGTGCCGGTCCAGACTTTCTGTGCCCTTTGGATCTTTCAC +
Preference number: 6 (lower is better)
Translates to: AQAQVDAGCSRSWLS*PVPVQTFCALWIFH
Trigger: GTGAAAGATCCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCTGTGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 90 bp CCAGAGTCAGATGTGGCAGATGCCGAGTCCCAGGAACTGTGGGGTTaGGGACACAGGCTCTTCCGGAAGGGCAAACTGCCACGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: PESDVADAESQELWG*GHRLFRKGKLPRGE
Trigger: TTCTCCACGTGGCAGTTTGCCCTTCCGGAAGAGCCTGTGTCCCAAACCCCACAGTTCCTGGGACTCGGCATCTGCCACATCTGACTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 90 bp GGAGTCCTGGCAGAGGAGTGCCACTCACTTTTGCCTAGGGTCCAGTaGGGGCATGTTGCCCAGGCTGATCTCGAACTGCTGGGAATACAG +
Preference number: 6 (lower is better)
Translates to: GVLAEECHSLLPRVQ*GHVAQADLELLGIQ
Trigger: CTGTATTCCCAGCAGTTCGAGATCAGCCTGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGCCAGGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589217.1
CDS TCA 72 bp AGACAGAAGCCTGCCGGTCACTTGCACGCAAACGGGTaGTGCCAACAGCACCTCCATCTGCTGAAGGTCGCT +
Preference number: 6 (lower is better)
Translates to: RQKPAGHLHANG*CQQHLHLLKVA
Trigger: AGCGACCTTCAGCAGATGGAGGTGCTGTTGGCATCACCCGTTTGCGTGCAAGTGACCGGCAGGCTTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589933.1
CDS GCA 72 bp AGGTGGATGCGGGGTGCAGCAGGTCTTGGCTTTCTTTaGCTGTGCCGGTCCAGACTTTCTGTGCCCTTTGGA +
Preference number: 6 (lower is better)
Translates to: RWMRGAAGLGFL*LCRSRLSVPFG
Trigger: TCCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCATCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS CAA 72 bp GCAGAGGAGTGCCACTCACTTTTGCCTAGGGTCCAGTaGGGGCATGTTGCCCAGGCTGATCTCGAACTGCTG +
Preference number: 6 (lower is better)
Translates to: AEECHSLLPRVQ*GHVAQADLELL
Trigger: CAGCAGTTCGAGATCAGCCTGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGCACTCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589217.1
CDS CAA 72 bp GCCACTCACTTTTGCCTAGGGTCCAGTTGGGGCATGTaGCCCAGGCTGATCTCGAACTGCTGGGAATACAGG +
Preference number: 6 (lower is better)
Translates to: ATHFCLGSSWGM*PRLISNCWEYR
Trigger: CCTGTATTCCCAGCAGTTCGAGATCAGCCTGGGCAACATGCCCCAACTGGACCCTAGGCAAAAGTGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589217.1
CDS GCA 72 bp ATGCGGGGTGCAGCAGGTCTTGGCTTTCTTTGCCTGTaGCGGTCCAGACTTTCTGTGCCCTTTGGATCTTTC +
Preference number: 6 (lower is better)
Translates to: MRGAAGLGFLCL*RSRLSVPFGSF
Trigger: GAAAGATCCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAAAGCCAAGACCTGCTGCACCCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586126.1
CDS GCA 72 bp ATGGACCAGAAGATGCTGGGCTCACCTCAGGGCCTTTaGACTGCTGGTCCCAATGACCAAAACATCTTCCCT +
Preference number: 6 (lower is better)
Translates to: MDQKMLGSPQGL*TAGPNDQNIFP
Trigger: AGGGAAGATGTTTTGGTCATTGGGACCAGCAGTGCAAAGGCCCTGAGGTGAGCCCAGCATCTTCTGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592076.5
CDS GCA 72 bp TCATTTACAGAGGAAGACAGAAGCCTGCCGGTCACTTaGACGCAAACGGGTGATGCCAACAGCACCTCCATC +
Preference number: 6 (lower is better)
Translates to: SFTEEDRSLPVT*TQTGDANSTSI
Trigger: GATGGAGGTGCTGTTGGCATCACCCGTTTGCGTGCAAGTGACCGGCAGGCTTCTGTCTTCCTCTGTAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589933.1
CDS CAA 72 bp TTCTTTGCCTGTGCCGGTCCAGACTTTCTGTGCCCTTaGGATCTTTCACCCCATTTGACAGATGGGGAGACT +
Preference number: 6 (lower is better)
Translates to: FFACAGPDFLCP*DLSPHLTDGET
Trigger: AGTCTCCCCATCTGTCAAATGGGGTGAAAGATCCAAAGGGCACAGAAAGTCTGGACCGGCACAGGCAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586126.1