RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000188869

Ensembl transcript IDs: ENST00000359440.6, ENST00000558726.5, ENST00000559982.1

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTaGGGAGAAGCAACGCAAGACCCCGGAAGCATGCCAACGTGTAAA +
Preference number: 1 (lower is better)
Translates to: CACGQPTPREEREES*GEATQDPGSMPTCK
Trigger: TTTACACGTTGGCATGCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CCA 90 bp TTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCCCTaGGAAACCATGTTTCTGCATCAACCTTGTAACTTTGCAGCTGCG +
Preference number: 1 (lower is better)
Translates to: LFSLLHLSILHVPHP*ETMFLHQPCNFAAA
Trigger: CGCAGCTGCAAAGTTACAAGGTTGATGCAGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR TCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATCAGCTAGCAGCCGCTaGCCATGCCCCTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRSASSR*PCPSGL
Trigger: GAGACCTGAGGGGCATGGTCAGCGGCTGCTAGCTGA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR TCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATCAGCTAGCAGCCGCTaGCCATGCCCCTCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: ACGQPTPREEREESWGEASASSR*PCPSGL
Trigger: GAGACCTGAGGGGCATGGTCAGCGGCTGCTAGCTGA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAAAGGGAGATGCCATGTaGTGGCCCAGCACTCCAACA +
Preference number: 2 (lower is better)
Translates to: LAGHYCACGQPTPREEREKGDAM*WPSTPT
Trigger: TGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAGCTGGTGACATACTTTaGTGCCACCTAACTCGGATA +
Preference number: 2 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRAGDIL*CHLTRI
Trigger: TATCCGAGTTAGGTGGCACCAAAGTATGTCACCAGC...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR GCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATGTCTTGAGCCCCTCTaGCAAATTCTTTCTTCCGAG +
Preference number: 2 (lower is better)
Translates to: ACGQPTPREEREESWGEACLEPL*QILSSE
Trigger: CTCGGAAGAAAGAATTTGGCAGAGGGGCTCAAGACA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR TCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTCGAGGAGGCAAGTATTaGGATTGCTGCAGACCCGTG +
Preference number: 2 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLRGGKY*DCCRPV
Trigger: CACGGGTCTGCAGCAATCTCAATACTTGCCTCCTCG...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
3UTR-3UTR GCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTAAGGGAGATGCCATGTaGTGGCCCAGCACTCCAACA +
Preference number: 2 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLKGDAM*WPSTPT
Trigger: TGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTT...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
3UTR-3UTR CCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGATAATTGGTCACAGCTaGCACCAGGGAACGACAGTC +
Preference number: 2 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRIIGHS*HQGTTV
Trigger: GACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTAT...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR TCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAAACTCCAACAGGGGCCTaGCCTCTAGGAACGGGACAC +
Preference number: 2 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQTPTGA*PLGTGH
Trigger: GTGTCCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGT...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CAA 90 bp GTCTTGAGCCCCTCTGCCAAATTCTTTCTTCCGAGGAGGCAAGTATaGAGATTGCTGCAGACCCGTGATGATTCACTGCTGGTGACATAC +
Preference number: 2 (lower is better)
Translates to: VLSPSAKFFLPRRQV*RLLQTRDDSLLVTY
Trigger: GTATGTCACCAGCAGTGAATCATCACGGGTCTGCAGCAATCTCAATACTTGCCTCCTCGGAAGAAAGAATTTGGCAGAGGGGCTCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CAA 90 bp AGCCCCTCTGCCAAATTCTTTCTTCCGAGGAGGCAAGTATTGAGATaGCTGCAGACCCGTGATGATTCACTGCTGGTGACATACTTTGGT +
Preference number: 2 (lower is better)
Translates to: SPSAKFFLPRRQVLR*LQTRDDSLLVTYFG
Trigger: ACCAAAGTATGTCACCAGCAGTGAATCATCACGGGTCTGCAGCAATCTCAATACTTGCCTCCTCGGAAGAAAGAATTTGGCAGAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGCTGGTGACATACTTTaGTGCCACCTAACTCGGATA +
Preference number: 2 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKAGDIL*CHLTRI
Trigger: TATCCGAGTTAGGTGGCACCAAAGTATGTCACCAGC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTCATGTTCCACATCCCTaGGAAACCATGTTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLHVPHP*ETMFLH
Trigger: ATGCAGAAACATGGTTTCCCAGGGATGTGGAACATG...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
3UTR-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAATCAAAGGTCAAACAGTaGACTGGATCTCTCAAGTCG +
Preference number: 2 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKSKVKQ*TGSLKS
Trigger: CGACTTGAGAGATCCAGTGCACTGTTTGACCTTTGA...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR TCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCACTCCAACAGGGGCCTaGCCTCTAGGAACGGGACAC +
Preference number: 2 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHITPTGA*PLGTGH
Trigger: GTGTCCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGT...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CAA 90 bp TACGCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTaGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCCC +
Preference number: 2 (lower is better)
Translates to: YARQEAYLQKREQRQ*FSLLHLSILHVPHP
Trigger: GGGATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
3UTR-3UTR TCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCGAAGCAGGAACTCGCTaGGCCTCAAGGAATGTGAAA +
Preference number: 2 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFEAGTR*ASRNVK
Trigger: TTTCACATTCCTTGAGGCTCAGCGAGTTCCTGCTTC...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR GCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAGTAAACTTTCATGCCTaGTCTAAAACTTGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPVNFHA*SKTCLS
Trigger: ACTGAGGCAAGTTTTAGAGCAGGCATGAAAGTTTAC...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTGTCTTGAGCCCCTCTaGCAAATTCTTTCTTCCGAG +
Preference number: 2 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHICLEPL*QILSSE
Trigger: CTCGGAAGAAAGAATTTGGCAGAGGGGCTCAAGACA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR GCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCGAGTGGGCTCAAACATaGGCACTAAGAGACAAAATG +
Preference number: 2 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFEWAQT*ALRDKM
Trigger: CATTTTGTCTCTTAGTGCGCATGTTTGAGCCCACTC...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CCA 72 bp GGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTaGGGAGAAGCAACGCAAGACCCCGGAAGCATGCCA +
Preference number: 3 (lower is better)
Translates to: GQPTPREEREES*GEATQDPGSMP
Trigger: TGGCATGCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR GCA 72 bp AACACACTTGTTCACCTCTTTTTCCAGAAAGGGAGATaGCATGTGCTGGCCCAGCACTCCAACAGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: NTLVHLFFQKGR*HVLAQHSNRGL
Trigger: CAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAAGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CAA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAAGGTCTCTAACACACTaGTTCACCTCTTTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRRSLTH*FTSFSR
Trigger: TCTGGAAAAAGAGGTGAACAAGTGTGTTAGAGACCT...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CAA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCACTAACTCGGATAAATTaGGCTAACAGTAGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: ACGQPTPREEREESWGEALTRIN*ANSSCR
Trigger: TCTACAGCTACTGTTAGCCAAATTTATCCGAGTTAG...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CAA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTGTCTCTCCTTCTGTCTaGAGCCCCTCTGCCAAATTC +
Preference number: 3 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFVSPSV*SPSAKF
Trigger: GAATTTGGCAGAGGGGCTCAAGACAGAAGGAGAGAC...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359440.6
3UTR-3UTR CAA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACTAACTCGGATAAATTaGGCTAACAGTAGCTGTAGA +
Preference number: 3 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQLTRIN*ANSSCR
Trigger: TCTACAGCTACTGTTAGCCAAATTTATCCGAGTTAG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR-3UTR CAA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCAGGCAAGTATTGAGATaGCTGCAGACCCGTGATGAT +
Preference number: 3 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFRQVLR*LQTRDD
Trigger: ATCATCACGGGTCTGCAGCAATCTCAATACTTGCCT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CCA 72 bp CTTTTACATTTATCTATACTACATGTTCCACATCCCTaGGAAACCATGTTTCTGCATCAACCTTGTAACTTT +
Preference number: 3 (lower is better)
Translates to: LLHLSILHVPHP*ETMFLHQPCNF
Trigger: AAAGTTACAAGGTTGATGCAGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGTGGCCTTCCTCCTGCTaGGCTGGCCCACGGACCTCG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRWPSSC*AGPRTS
Trigger: CGAGGTCCGTGGGCCAGCCCAGCAGGAGGAAGGCCA...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATGGGGTGTGCCCGAGTaGGCTGAGGACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRWGVPE*AEDSWL
Trigger: CAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGGGGCCTGGGACCCTGTaGCAGCAAAGTCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRGPGTL*QQSRGL
Trigger: CAGGCCTCGACTTTGCTGGCACAGGGTCCCAGGCCC...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAACTTGGCCTTCCTCCTaGTGGGCTGGCCCACGGACC +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERETWPSS*WAGPRT
Trigger: GGTCCGTGGGCCAGCCCAGCAGGAGGAAGGCCAAGT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACCTGGCCTCGGGCTCTaGGGCATGGACTGTGCGACT +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRPGLGL*GMDCAT
Trigger: AGTCGCACAGTCCATGCCCCAGAGCCCGAGGCCAGG...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCTGTGGGGAGGGAGGCTaGCGGGGGACCCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSCGEGG*RGTRDA
Trigger: TGCATCCCGGGTCCCCCGCCAGCCTCCCTCCCCACA...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGTTCCTCCTGCTGGGCTaGCCCACGGACCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRFLLLG*PTDLGN
Trigger: GTTCCCGAGGTCCGTGGGCCAGCCCAGCAGGAGGAA...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGTGTGCCCGAGTGCGCTaGGGACAGCTGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRCARVR*GQLAGK
Trigger: CTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACA...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCCAGAGCTCTGCACCTaGTGCTTGGTAGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGPELCT*CLVASG
Trigger: ACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTCTGG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATCCACGGTCAGCTCCTaGCCCGACTTGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRSTVSS*PDLAFL
Trigger: GAGGAAGGCCAAGTCGGGGCAGGAGCTGACCGTGGA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGCTCCTGCCCCGACTTaGCCTTCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAAPAPT*PSSCWA
Trigger: AGCCCAGCAGGAGGAAGGCCAAGTCGGGGCAGGAGC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATGCCCTGGCTGTGGGTaGCCTGCAGGTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEACPGCG*PAGTGQ
Trigger: CTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGGAAAAGCAGGAGTACTaGGGGCAGGATGACCACGGG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGEKQEY*GQDDHG
Trigger: CCCGTGGTCATCCTGCCCGCAGTACTCCTGCTTTTC...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGCGGGGGACCCGGGATaGATATTGTCGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREAGDPG*ILSHVP
Trigger: AGGAACGTGCGACAATATGCATCCCGGGTCCCCCGC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCTGGTCACTGCTGGATaGTGCCGACACGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGLVTAG*CRHGVR
Trigger: TCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCACTTGGCCTTCCTCCTaGTGGGCTGGCCCACGGACC +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSTWPSS*WAGPRT
Trigger: GGTCCGTGGGCCAGCCCAGCAGGAGGAAGGCCAAGT...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGCTGGAAGCGCAGCGTaGTCCTGGGGTGGTACATCT +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREAGSAA*SWGGTS
Trigger: AGATGTACCACCCCAGGACCACGCTGCGCTTCCAGC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGTGGGGGCGTGGGGCCTaGGACCCTGTGCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGWGRGA*DPVPAK
Trigger: CTTTGCTGGCACAGGGTCCCAGGCCCCACGCCCCCA...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCTCGGAAGAAGTCTATaGGCAGAATGCTCGCCACGG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGLGRSL*AECSPR
Trigger: CCGTGGCGAGCATTCTGCTCATAGACTTCTTCCGAG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCTGTGCCCGAGTGCGCTaGGGACAGCTGGCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSCARVR*GQLAGK
Trigger: CTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACA...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTGACCCCAGGGAGAGGTaGGCTAGGAGCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTDPRER*ARSPVP
Trigger: GGGGACAGGGCTCCTAGCTCACCTCTCCCTGGGGTC...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGTTTCCGCCAGAGCTCTaGACCTGCTGCTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRFPPEL*TCCLVA
Trigger: GGCTACCAAGCAGCAGGTGCAGAGCTCTGGCGGAAA...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCGACTGTCTCTATCCTaGCACTCTTGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGRLSLS*HSCCSL
Trigger: CAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAACTGGGGCATGGACTGTaGGACTGTCTCTATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERELGHGL*DCLYPA
Trigger: GGCAGGATAGAGACAGTCGCACAGTCCATGCCCCAG...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATGTTCTGCTGGTCACTaGTGGATGCTGCCGACACGG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERECSAGH*WMLPTR
Trigger: CCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAACGTTGCCGTTGTTTTaGGGTGTGCCCGAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRTLPLF*GVPECA
Trigger: AGCGCACTCGGGCACACCCCAAAACAACGGCAACGT...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATCGGGCTCTGGGGCATaGACTGTGCGACTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERESGSGA*TVRLSL
Trigger: TAGAGACAGTCGCACAGTCCATGCCCCAGAGCCCGA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGCTCTAGCCTGGATTTaGGGACCCCAGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAALAWI*GPQGEV
Trigger: CACCTCTCCCTGGGGTCCCCAAATCCAGGCTAGAGC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAAGATTCCGTGAGGGATaGCTCGAACCTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRRFREG*LEPGLP
Trigger: GGGAAGCCCAGGTTCGAGCCATCCCTCACGGAATCT...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATGTGTTGTTTCTCCTaGGCCCCATTCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRMCCFS*APFQAE
Trigger: CTCGGCCTGGAATGGGGCTCAGGAGAAACAACACAT...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACGCGATCTGTTCCTGTaGAGGTCACTGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRRDLFL*RSLVLA
Trigger: TGCAAGCACCAGTGACCTTCACAGGAACAGATCGCG...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGTCGGGATCCCGGGTCTaGCTTTCGGACCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRSGSRV*LSDLSP
Trigger: TGGGGAGAGGTCCGAAAGTCAGACCCGGGATCCCGA...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAACGAGGAGGCAAGTATTaGGATTGCTGCAGACCCGTG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERERGGKY*DCCRPV
Trigger: CACGGGTCTGCAGCAATCTCAATACTTGCCTCCTCG...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGGGAGACCACCACACTaGCCTGCTCATTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREGRPPH*PAHSFP
Trigger: GGGAAAAGAATGAGCAGGTCAGTGTGGTGGTCTCCC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558726.5
CDS-3UTR GCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGCAGCGGAGTTTGCTCTaGCCGCTAGTTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRQRSLL*PLVLRK
Trigger: CTTCCTGAGAACTAGCGGGCAGAGCAAACTCCGCTG...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCGAGCTCTGCACCTGCTaGTTGGTAGCCTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSELCTC*LVASGP
Trigger: AGGACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTC...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGGTACTGGTCAGCGCTaGTGTTCTGCTGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAGTGQR*CSAGHC
Trigger: GCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAAGGGAGATGCCATGTaGTGGCCCAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRKGDAM*WPSTPT
Trigger: TGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTT...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAAGCGTGGTCCTGGGGTaGTACATCTCTAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERESVVLG*YISKAA
Trigger: TGCTGCCTTAGAGATGTACCACCCCAGGACCACGCT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATGCGCTGAGGACAGCTaGCTGGTAAGATCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERECAEDS*LVRSLS
Trigger: CGACAGTGATCTTACCAGCCAGCTGTCCTCAGCGCA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGGAAATTCCGGGATCGTaGCTTTCTGGGCACATAGGC +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGEIPGS*LSGHIG
Trigger: GCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTC...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGGGGGCTGTGGGTATTaGAAATTCCGGGATCGTGGC +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAGGCGY*KFRDRG
Trigger: GCCACGATCCCGGAATTTCCAATACCCACAGCCCCC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGCCTCTGGGTTTCCAATaGGGTAATCCCAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRPLGFQ*GNPRHR
Trigger: TCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGG...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTCTCTAAGGCAGCAATaGGGTCAAAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGSLRQQ*GQRLMV
Trigger: CACCATCAGCCTTTGACCTCATTGCTGCCTTAGAGA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGTGGTCTTGTGGACTCTaGGTGTGGAGGCTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRWSCGL*VWRLVL
Trigger: CAAGACTAGCCTCCACACTCAGAGTCCACAAGACCA...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATGGTCTTGTGGACTCTaGGTGTGGAGGCTAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREWSCGL*VWRLVL
Trigger: CAAGACTAGCCTCCACACTCAGAGTCCACAAGACCA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAGCTTCAGCATCTCCTaGCCAACGTATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRSFSIS*PTYVSQ
Trigger: CTGGGAGACATACGTTGGTCAGGAGATGCTGAAGCT...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGGGGAAGAGACCGTTTaGTCCAATCTCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAGEETV*SNLCLA
Trigger: CGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGGCTGGCCTCTCAAGGTaGCCCTCAAAATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGAGLSR*PSKSSF
Trigger: GAATGAAGATTTTGAGGGTCACCTTGAGAGGCCAGC...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCGGAGTCAGATTCCGTaGGGGATGGCTCGAACCTGG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRRSQIP*GMARTW
Trigger: CCAGGTTCGAGCCATCCCTCACGGAATCTGACTCCG...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTCTATAGCGCTGGGATaGCTTCGAGGTTTTCATGGG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGSIALG*LRGFHG
Trigger: CCCATGAAAACCTCGAAGGCATCCCAGCGCTATAGA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACTATGGCAGCTGTTTTaGTCTCTGCAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRLWQLF*SLQPLG
Trigger: ACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAG...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGGAGGCTCGAAATACTTaGTGGTGGGGCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSREARNT*WWGTLQ
Trigger: CTGCAATGTGCCCCACCAGCAAGTATTTCGAGCCTC...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAGAGGCTCGAAATACTTaGTGGTGGGGCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGREARNT*WWGTLQ
Trigger: CTGCAATGTGCCCCACCAGCAAGTATTTCGAGCCTC...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCGTTGTTTTGGGGTGTaGCCGAGTGCGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSRCFGV*PSALRT
Trigger: TGTCCTCAGCGCACTCGGGCACACCCCAAAACAACG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATCCTGCCACTCTTGCTaGTCCCTGAGTCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERESCHSC*SLSQNG
Trigger: CCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCGGGGGACCCGGGATaGATATTGTCGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGAGDPG*ILSHVP
Trigger: AGGAACGTGCGACAATATGCATCCCGGGTCCCCCGC...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCTGTTCTGCTGGTCACTaGTGGATGCTGCCGACACGG +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSCSAGH*WMLPTR
Trigger: CCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACA...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCTTTCTTCCTGGGTCTaGATTCGGGCTTCTACCATC +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGLSSWV*IRASTI
Trigger: GATGGTAGAAGCCCGAATCCAGACCCAGGAAGAAAG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGTCTATCAGGGAGCGTaGGGGAAGAGACCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREVYQGA*GKRPFD
Trigger: ATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGAC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGGGGATGGCTCGAACCTaGGCTTCCCTCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRGMART*ASLWAS
Trigger: TGAAGCCCAGAGGGAAGCCCAGGTTCGAGCCATCCC...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCTCTGCTGGTCACTGCTaGATGCTGCCGACACGGAGT +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSSAGHC*MLPTRS
Trigger: ACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGA...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGGCGCTGCTGTTCTGCTaGTCACTGCTGGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRALLFC*SLLDAA
Trigger: GGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGC...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAACTGTTCCGAGGTTTCTaGATGGAAGCAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERELFRGF*MEAAEF
Trigger: AAACTCCGCTGCTTCCATTCAGAAACCTCGGAACAG...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCACGGTGAGGAGGGTTaGTTTGCTGAAAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGHGEEG*FAESLF
Trigger: GAAAAGACTTTCAGCAAATCAACCCTCCTCACCGTG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCATCGGGATCCCGGGTCTaGCTTTCGGACCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPSGSRV*LSDLSP
Trigger: TGGGGAGAGGTCCGAAAGTCAGACCCGGGATCCCGA...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGCTGGCCTCTCAAGGTaGCCCTCAAAATCTTCATTC +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREAGLSR*PSKSSF
Trigger: GAATGAAGATTTTGAGGGTCACCTTGAGAGGCCAGC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCGAGGAGGCAAGTATTaGGATTGCTGCAGACCCGTG +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSRGGKY*DCCRPV
Trigger: CACGGGTCTGCAGCAATCTCAATACTTGCCTCCTCG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGGAAAAGCAGGAGTACTaGGGGCAGGATGACCACGGG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVREKQEY*GQDDHG
Trigger: CCCGTGGTCATCCTGCCCGCAGTACTCCTGCTTTTC...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCGTTGTTTTGGGGTGTaGCCGAGTGCGCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRRCFGV*PSALRT
Trigger: TGTCCTCAGCGCACTCGGGCACACCCCAAAACAACG...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGGGCCTGGGACCCTGTaGCAGCAAAGTCGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKGPGTL*QQSRGL
Trigger: CAGGCCTCGACTTTGCTGGCACAGGGTCCCAGGCCC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGCTGGTCACTGCTGGATaGTGCCGACACGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGLVTAG*CRHGVR
Trigger: TCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAG...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTGTCTTGAGCCCCTCTaGCAAATTCTTTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGCLEPL*QILSSE
Trigger: CTCGGAAGAAAGAATTTGGCAGAGGGGCTCAAGACA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATCCGAGGTTTCTGAATaGAAGCAGCGGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRSEVSE*KQRSLL
Trigger: GAGCAAACTCCGCTGCTTCCATTCAGAAACCTCGGA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGTGACCTGCAGGTACTaGTCAGCGCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGVTCRY*SALLFC
Trigger: GCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCAC...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGCTCCTGCCCCGACTTaGCCTTCCTCCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKAPAPT*PSSCWA
Trigger: AGCCCAGCAGGAGGAAGGCCAAGTCGGGGCAGGAGC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGATAATTGGTCACAGCTaGCACCAGGGAACGACAGTC +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRIIGHS*HQGTTV
Trigger: GACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTAT...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAATGAGGTCAAAGGCTaGTGGTGCTATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRNEVKG*WCYHGD
Trigger: GTCACCATGATAGCACCATCAGCCTTTGACCTCATT...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCAGCTTCAGCATCTCCTaGCCAACGTATGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSSFSIS*PTYVSQ
Trigger: CTGGGAGACATACGTTGGTCAGGAGATGCTGAAGCT...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCGACTGTCTCTATCCTaGCACTCTTGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRRLSLS*HSCCSL
Trigger: CAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCG...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGTCACTGCTGGATGCTaGCGACACGGAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGVTAGC*RHGVRF
Trigger: GAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGAC...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATGTCTTGAGCCCCTCTaGCAAATTCTTTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERECLEPL*QILSSE
Trigger: CTCGGAAGAAAGAATTTGGCAGAGGGGCTCAAGACA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAGCTGGAAGCGCAGCGTaGTCCTGGGGTGGTACATCT +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPAGSAA*SWGGTS
Trigger: AGATGTACCACCCCAGGACCACGCTGCGCTTCCAGC...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATTCCAGGCCGAGATGTaGACCATTTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRFQAEM*TISLLQ
Trigger: CTGAAGAAGAGAAATGGTCCACATCTCGGCCTGGAA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGAGAACGTTGAACGCTaGGAGACATGGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAENVER*ETWGEE
Trigger: TTCTTCTCCCCATGTCTCCCAGCGTTCAACGTTCTC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTGCATTTTGAGCTGGTaGTTGCTGAGCTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGCILSW*LLSFRD
Trigger: GTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATGGGGGCGTGGGGCCTaGGACCCTGTGCCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQWGRGA*DPVPAK
Trigger: CTTTGCTGGCACAGGGTCCCAGGCCCCACGCCCCCA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATGTGGGGAGGGAGGCTaGCGGGGGACCCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPCGEGG*RGTRDA
Trigger: TGCATCCCGGGTCCCCCGCCAGCCTCCCTCCCCACA...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTTCTGCTGGTCACTGCTaGATGCTGCCGACACGGAGT +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTSAGHC*MLPTRS
Trigger: ACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGA...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGCATGTTCCACATCCCTaGGAAACCATGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGHVPHP*ETMFLH
Trigger: ATGCAGAAACATGGTTTCCCAGGGATGTGGAACATG...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATCGGAAAAGAGGTTCTaGGTGTACATCTTCGATGTG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERESEKRF*VYIFDV
Trigger: CACATCGAAGATGTACACTCAGAACCTCTTTTCCGA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGGGAAGCCTAGACATCTaGACAAATCAAGTCATCCAG +
Preference number: 4 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRGSLDI*TNQVIQ
Trigger: CTGGATGACTTGATTTGTTCAGATGTCTAGGCTTCC...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTTCAGCTAGCAGCCGCTaGCCATGCCCCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFSASSR*PCPSGL
Trigger: GAGACCTGAGGGGCATGGTCAGCGGCTGCTAGCTGA...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAACAGATAAGGCTTGCTaGGCACAGAAGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREERETDKAC*AQKEKQ
Trigger: CTGTTTTTCCTTCTGTGCTCAGCAAGCCTTATCTGT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCTTCGCTTGTCTCAATaGCCTCAGCTTCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSLRLSQ*PQLLSH
Trigger: ATGGGACAGAAGCTGAGGGCATTGAGACAAGCGAAG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAAGCTGTTTTGCTCTCTaGAGCCTCTGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEASCFAL*SLWVSN
Trigger: ATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCT...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACAGGCAGATGGTCACTaGCAGGTTTTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRQADGH*QVFAFL
Trigger: AAGAAAAGCAAAAACCTGGCAGTGACCATCTGCCTG...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAAGCTCCTTCTTCGACTaGTCCAGCTTCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPSSFFD*SSFWDR
Trigger: CCGGTCCCAGAAGCTGGAGCAGTCGAAGAAGGAGCT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACAGCACAAGGACCCTTaGAAGCTGGAAGCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPQHKDP*KLEAQR
Trigger: ACGCTGCGCTTCCAGCTTGCAAGGGTCCTTGTGCTG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATTGGAAGCTTCTTGGTaGTTTCTTCCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEALEASW*FLPGSG
Trigger: TCCAGACCCAGGAAGAAAGCACCAAGAAGCTTCCAA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGTCCTGCCACTCTTGCTaGTCCCTGAGTCAAAATGGG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRSCHSC*SLSQNG
Trigger: CCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGA...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCAAGGTCACTGGTGCTTaGACACAGACCGTGCAGATA +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSKVTGA*TQTVQI
Trigger: TATCTGCACGGTCTGTGTGCAAGCACCAGTGACCTT...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTACGAAACCTGCTCCTTaGGGATGGTCTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTTKPAP*GWSSWL
Trigger: CAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGT...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATATAAGCTGAAATGCTaGTCTCTTCCAAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRYKLKC*SLPRPM
Trigger: CATGGGCCTTGGAAGAGACCAGCATTTCAGCTTATA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTCCAGCACTGGTCTTGTaGACTCTGAGTGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTPALVL*TLSVEA
Trigger: AGCCTCCACACTCAGAGTCCACAAGACCAGTGCTGG...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTCTGATCTTGCGTTTTaGATCTGCATTTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGSDLAF*ICILSW
Trigger: CCAGCTCAAAATGCAGATCCAAAACGCAAGATCAGA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGAAATTCCGGGATCGTaGCTTTCTGGGCACATAGGC +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGEIPGS*LSGHIG
Trigger: GCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTC...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATTCCTCCTGCTGGGCTaGCCCACGGACCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQFLLLG*PTDLGN
Trigger: GTTCCCGAGGTCCGTGGGCCAGCCCAGCAGGAGGAA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATGGCCTTCCTCCTGCTaGGCTGGCCCACGGACCTCG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPWPSSC*AGPRTS
Trigger: CGAGGTCCGTGGGCCAGCCCAGCAGGAGGAAGGCCA...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
3UTR CAA 72 bp CTGGTGATCGGCAGCTTCCCCATAAAATGTCAGGAGTaGGGCGAGTGGGCTCAAACATGCGCACTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LVIGSFPIKCQE*GEWAQTCALRD
Trigger: GTCTCTTAGTGCGCATGTTTGAGCCCACTCGCCCAACTCCTGACATTTTATGGGGAAGCTGCCGATCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGTCTCTAAGGCAGCAATaGGGTCAAAGGCTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRSLRQQ*GQRLMV
Trigger: CACCATCAGCCTTTGACCTCATTGCTGCCTTAGAGA...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTACTCTTGCTGCTCCCTaGGTCAAAATGGGCCACGTT +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTTLAAP*VKMGHV
Trigger: AACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAGT...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACGCGATCTGTTCCTGTaGAGGTCACTGGTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPRDLFL*RSLVLA
Trigger: TGCAAGCACCAGTGACCTTCACAGGAACAGATCGCG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATCGGAAAAGAGGTTCTaGGTGTACATCTTCGATGTG +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEASEKRF*VYIFDV
Trigger: CACATCGAAGATGTACACTCAGAACCTCTTTTCCGA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCACGGTGAGGAGGGTTaGTTTGCTGAAAGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSHGEEG*FAESLF
Trigger: GAAAAGACTTTCAGCAAATCAACCCTCCTCACCGTG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACTGAAGCATCTATCTTaGAATGTCTTTCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRLKHLS*NVFLAR
Trigger: TCTGGCCAGAAAGACATTTCAAGATAGATGCTTCAG...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTGCGTCCAGGAAAGTCTaGGCCCTGGATAAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTASRKV*ALDKES
Trigger: GCTTTCTTTATCCAGGGCTCAGACTTTCCTGGACGC...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR GCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATTTGTTCCGGATCATTaGTGTCCCCTGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAFVPDH*CPLFHQ
Trigger: CTGATGAAACAGGGGACAGCAATGATCCGGAACAAA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGCTTCGCTTGTCTCAATaGCCTCAGCTTCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGLRLSQ*PQLLSH
Trigger: ATGGGACAGAAGCTGAGGGCATTGAGACAAGCGAAG...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTCCAGAGCTCTGCACCTaGTGCTTGGTAGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFPELCT*CLVASG
Trigger: ACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTCTGG...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCTATCCTGCCACTCTTaGTGCTCCCTGAGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSLSCHS*CSLSQN
Trigger: ATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAACTGGGGCATGGACTGTaGGACTGTCTCTATCCTGCC +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKLGHGL*DCLYPA
Trigger: GGCAGGATAGAGACAGTCGCACAGTCCATGCCCCAG...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAAAGGGAGATGCCATGTaGTGGCCCAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPKGDAM*WPSTPT
Trigger: TGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATCAAAGGTCAAACAGTaGACTGGATCTCTCAAGTCG +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEASKVKQ*TGSLKS
Trigger: CGACTTGAGAGATCCAGTGCACTGTTTGACCTTTGA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGCCTGCAATCAGCTCTaGAATGACAATAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: ACGQPTPREEREESWGEAACNQL*NDNKST
Trigger: GGTGCTTTTATTGTCATTCCAGAGCTGATTGCAGGC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTGCTCGAAATACTTGCTaGTGGGGCACATTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTARNTC*WGTLQV
Trigger: GACCTGCAATGTGCCCCACCAGCAAGTATTTCGAGC...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAAAGATCACTGTCGTTTaGAAGCTTCTTGGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LAGHYCACGQPTPREEREKITVV*KLLGAF
Trigger: GAAAGCACCAAGAAGCTTCCAAACGACAGTGATCTT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTTCCTGTGAAGGTCACTaGTGCTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTSCEGH*CLHTDR
Trigger: ACGGTCTGTGTGCAAGCACCAGTGACCTTCACAGGA...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAATCTGGGCACATAGGCTaGCCTCTCAAGGTGACCCTC +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKSGHIG*PLKVTL
Trigger: GAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGA...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGGGGGCTGTGGGTATTaGAAATTCCGGGATCGTGGC +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKGGCGY*KFRDRG
Trigger: GCCACGATCCCGGAATTTCCAATACCCACAGCCCCC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGTGACCTGCAGGTACTaGTCAGCGCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKVTCRY*SALLFC
Trigger: GCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCAC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGGGAAAGTCTGAGCCCTaGATAAAGAAAGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRGKSEP*IKKAAT
Trigger: GGTGGCTGCTTTCTTTATCCAGGGCTCAGACTTTCC...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCAGGCATGGTATAAGCTaGAATGCTGGTCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSRHGIS*NAGLFQ
Trigger: TTGGAAGAGACCAGCATTTCAGCTTATACCATGCCT...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAATGGGCAGACGAAACCTaGTCCTTGGGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKWADET*SLGMVF
Trigger: GAAGACCATCCCCAAGGAGCAGGTTTCGTCTGCCCA...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCATGTGAAGGTCACTGGTaGTTGCACACAGACCGTGCA +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPCEGHW*LHTDRA
Trigger: TGCACGGTCTGTGTGCAAGCACCAGTGACCTTCACA...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTGTACATCTTCGATGTaGGTTGTAAATGTCATAGGT +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGCTSSM*VVNVIG
Trigger: ACCTATGACATTTACAACGCACATCGAAGATGTACA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCGAGTGGGCTCAAACATaGGCACTAAGAGACAAAATG +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSEWAQT*ALRDKM
Trigger: CATTTTGTCTCTTAGTGCGCATGTTTGAGCCCACTC...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTAGAGAGCTAGGAAGTTaGCAGGCAAAGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTRELGS*QAKVCS
Trigger: GGAACAGACCTTTGCCTGCCAACTTCCTAGCTCTCT...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTGGAACTGTATATTCTaGAAGATTTGTTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGWNCIF*KICSGS
Trigger: TGATCCGGAACAAATCTTCCAGAATATACAGTTCCA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGTGCTTCCAAAGGGCTaGCCTGCAATCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKVLPKG*PAISSG
Trigger: TCCAGAGCTGATTGCAGGCCAGCCCTTTGGAAGCAC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACGAAATACTTGCTGGTaGGGCACATTGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPRNTCW*GTLQVS
Trigger: GCTGACCTGCAATGTGCCCCACCAGCAAGTATTTCG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCGTTTGGAAGCTTCTTaGTGCTTTCTTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRRLEAS*CFLPGS
Trigger: AGACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACG...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAAAACCTGCCCTGGCTGTaGGTGACCTGCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQNLPWL*VTCRYW
Trigger: CCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTT...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACTAGGAACGGGACACTaGAGGAAGCCTAGACATCTG +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPLGTGH*RKPRHL
Trigger: CAGATGTCTAGGCTTCCTCCAGTGTCCCGTTCCTAG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTATAATTGGTCACAGCTaGCACCAGGGAACGACAGTC +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTIIGHS*HQGTTV
Trigger: GACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTAT...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCATGTCATCCAAGTTGCTaGGCAGCAGAGATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPCHPSC*AAEIPG
Trigger: ACCAGGAATCTCTGCTGCTCAGCAACTTGGATGACA...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTATGTGTTGTTTCTCCTaGGCCCCATTCCAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFMCCFS*APFQAE
Trigger: CTCGGCCTGGAATGGGGCTCAGGAGAAACAACACAT...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAACTCTTGCTGCTCCCTaGGTCAAAATGGGCCACGTT +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKTLAAP*VKMGHV
Trigger: AACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAGT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCGGAGGGTTGATTTGCTaGAAGTCTTTTCGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSGGLIC*KSFRKR
Trigger: TCTTTTCCGAAAAGACTTTCAGCAAATCAACCCTCC...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAACTCCAACAGGGGCCTaGCCTCTAGGAACGGGACAC +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPTPTGA*PLGTGH
Trigger: GTGTCCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAGAAGCAGGAACTCGCTaGGCCTCAAGGAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPEAGTR*ASRNVK
Trigger: TTTCACATTCCTTGAGGCTCAGCGAGTTCCTGCTTC...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTCAGCGGAGTTTGCTCTaGCCGCTAGTTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFQRSLL*PLVLRK
Trigger: CTTCCTGAGAACTAGCGGGCAGAGCAAACTCCGCTG...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR GCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTCGATCTTCCTCTCCCTaGCGTAATATCCGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTRSSSP*RNIRRR
Trigger: TCTTCTACGGATATTACGGCAGGGAGAGGAAGATCG...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAACTATGGCAGCTGTTTTaGTCTCTGCAGCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKLWQLF*SLQPLG
Trigger: ACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAG...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTTTGGAAGCTTCTTGGTaGTTTCTTCCTGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTLEASW*FLPGSG
Trigger: TCCAGACCCAGGAAGAAAGCACCAAGAAGCTTCCAA...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGCTTGCACACAGACCGTaGAGATACCTGTTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGLAHRP*RYLLVS
Trigger: TGAAACTAACAGGTATCTGCACGGTCTGTGTGCAAG...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAATGTGAAGGTCACTGGTaGTTGCACACAGACCGTGCA +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKCEGHW*LHTDRA
Trigger: TGCACGGTCTGTGTGCAAGCACCAGTGACCTTCACA...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAAGGTACTGGTCAGCGCTaGTGTTCTGCTGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQGTGQR*CSAGHC
Trigger: GCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACC...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATGGCTGTGGGTGACCTaGAGGTACTGGTCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPWLWVT*RYWSAL
Trigger: CAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCA...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACTTTCTTCCTGGGTCTaGATTCGGGCTTCTACCATC +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPLSSWV*IRASTI
Trigger: GATGGTAGAAGCCCGAATCCAGACCCAGGAAGAAAG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATCGGGCTCTGGGGCATaGACTGTGCGACTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQSGSGA*TVRLSL
Trigger: TAGAGACAGTCGCACAGTCCATGCCCCAGAGCCCGA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAGCTCTAGCCTGGATTTaGGGACCCCAGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPALAWI*GPQGEV
Trigger: CACCTCTCCCTGGGGTCCCCAAATCCAGGCTAGAGC...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGTCTATCAGGGAGCGTaGGGGAAGAGACCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKVYQGA*GKRPFD
Trigger: ATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGAC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAGCGCTGCTGTTCTGCTaGTCACTGCTGGATGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPALLFC*SLLDAA
Trigger: GGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGC...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAAATGAGGTCAAAGGCTaGTGGTGCTATCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPNEVKG*WCYHGD
Trigger: GTCACCATGATAGCACCATCAGCCTTTGACCTCATT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTAGGCATGGTATAAGCTaGAATGCTGGTCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTRHGIS*NAGLFQ
Trigger: TTGGAAGAGACCAGCATTTCAGCTTATACCATGCCT...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCGACCCCAGGGAGAGGTaGGCTAGGAGCCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFDPRER*ARSPVP
Trigger: GGGGACAGGGCTCCTAGCTCACCTCTCCCTGGGGTC...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGGAGGGTTGATTTGCTaGAAGTCTTTTCGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGGGLIC*KSFRKR
Trigger: TCTTTTCCGAAAAGACTTTCAGCAAATCAACCCTCC...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGAAGCAGGAACTCGCTaGGCCTCAAGGAATGTGAAA +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKEAGTR*ASRNVK
Trigger: TTTCACATTCCTTGAGGCTCAGCGAGTTCCTGCTTC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTGGTATAAGCTGAAATaGTGGTCTCTTCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLWYKLK*WSLPRP
Trigger: GGGCCTTGGAAGAGACCAGCATTTCAGCTTATACCA...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAAAGGTCACTGGTGCTTaGACACAGACCGTGCAGATA +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKKVTGA*TQTVQI
Trigger: TATCTGCACGGTCTGTGTGCAAGCACCAGTGACCTT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCGGGAAACCATGTTTCTaGATCAACCTTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSGKPCF*INLVTL
Trigger: CAAAGTTACAAGGTTGATGCAGAAACATGGTTTCCC...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAGGTAGCCTCGGGTCCTaGTCAGCCTCCCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPGSLGS*SASLQT
Trigger: AGTTTGAAGGGAGGCTGACCAGGACCCGAGGCTACC...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAACGGTGTCCAGGTCTTaGGCAGACGAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPTVSRS*ADETCS
Trigger: GGAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGAGGTATAGTTTTCATTaGAAGCACTGGCAAGACTCG +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGRYSFH*KHWQDS
Trigger: CGAGTCTTGCCAGTGCTTCCAATGAAAACTATACCT...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCCAAGTAGAAGTTGTTaGATCTTGAGGCTCGAAATA +
Preference number: 4 (lower is better)
Translates to: PREEREESWGEATQDPGSPSRSC*ILRLEI
Trigger: TATTTCGAGCCTCAAGATCCAACAACTTCTACTTGG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGTCTGATCTTGCGTTTTaGATCTGCATTTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRSDLAF*ICILSW
Trigger: CCAGCTCAAAATGCAGATCCAAAACGCAAGATCAGA...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTCGTTTGGAAGCTTCTTaGTGCTTTCTTCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLRLEAS*CFLPGS
Trigger: AGACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACG...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTGCTGGTGACATACTTTaGTGCCACCTAACTCGGATA +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLAGDIL*CHLTRI
Trigger: TATCCGAGTTAGGTGGCACCAAAGTATGTCACCAGC...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTCTGTTCCGAGGTTTCTaGATGGAAGCAGCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFLFRGF*MEAAEF
Trigger: AAACTCCGCTGCTTCCATTCAGAAACCTCGGAACAG...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTCTCCACAATGTCACCTaGAGCATCTATCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: KWSIPLVREEPRVSACTTLHNVT*SIYLEM
Trigger: CATTTCAAGATAGATGCTTCAGGTGACATTGTGGAG...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGATAAGGCTTGCTaGGCACAGAAGGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPTDKAC*AQKEKQ
Trigger: CTGTTTTTCCTTCTGTGCTCAGCAAGCCTTATCTGT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACATATTCAGGAAACTTaGTCTCCAGATCCCAACACC +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPHIQET*SPDPNT
Trigger: GGTGTTGGGATCTGGAGAGCAAGTTTCCTGAATATG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTGGGGTGTGCCCGAGTaGGCTGAGGACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFWGVPE*AEDSWL
Trigger: CAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAACTATCCTGCCACTCTTaGTGCTCCCTGAGTCAAAAT +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKLSCHS*CSLSQN
Trigger: ATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAG...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGGGGAAACCATGTTTCTaGATCAACCTTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRGKPCF*INLVTL
Trigger: CAAAGTTACAAGGTTGATGCAGAAACATGGTTTCCC...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAAGAGGTAGCACTGGCTaGCATTTCTCCGGATGCCTC +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPRGSTG*HFSGCL
Trigger: GAGGCATCCGGAGAAATGCCAGCCAGTGCTACCTCT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCATGAGATCTTTCTaGAACTGTATATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGAMRSF*NCIFWK
Trigger: CTTCCAGAATATACAGTTCCAGAAAGATCTCATGGC...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTGCATTTTGAGCTGGTaGTTGCTGAGCTTTAGAGAC +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLCILSW*LLSFRD
Trigger: GTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCA...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACTTCAGAGGGGGCTGTaGGTATTGGAAATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQLQRGL*VLEIPG
Trigger: TCCCGGAATTTCCAATACCCACAGCCCCCTCTGAAG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAACCATCTCAAGAATATaGAATAGGAGGCAACGCCAG +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKTISRI*NRRQRQ
Trigger: CTGGCGTTGCCTCCTATTTCATATTCTTGAGATGGT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAAATGCTCCCAGCCAGTaGGAGAAGCACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPNAPSQ*EKHQDV
Trigger: AACATCCTGGTGCTTCTCTCACTGGCTGGGAGCATT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTCTGAAGCATCTATCTTaGAATGTCTTTCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLLKHLS*NVFLAR
Trigger: TCTGGCCAGAAAGACATTTCAAGATAGATGCTTCAG...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTGCCCTGGCTGTGGGTaGCCTGCAGGTACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFCPGCG*PAGTGQ
Trigger: CTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTCAGCTAGCAGCCGCTaGCCATGCCCCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFSASSR*PCPSGL
Trigger: GAGACCTGAGGGGCATGGTCAGCGGCTGCTAGCTGA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTGTCTTTATTAAAAGGTaGTCACCTGGCTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLVFIKR*SPGSVG
Trigger: TCCTACTGAGCCAGGTGATCACCTTTTAATAAAGAC...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR GCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATCTATAGCGCTGGGATaGCTTCGAGGTTTTCATGGG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQSIALG*LRGFHG
Trigger: CCCATGAAAACCTCGAAGGCATCCCAGCGCTATAGA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAATACCTGTTAGTTTCATaGTCTAGCCTGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKYLLVS*SSLDLG
Trigger: CCCCAAATCCAGGCTAGAGCATGAAACTAACAGGTA...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTCCACGGTCAGCTCCTaGCCCGACTTGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFSTVSS*PDLAFL
Trigger: GAGGAAGGCCAAGTCGGGGCAGGAGCTGACCGTGGA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAGAGTGGGCTCAAACATaGGCACTAAGAGACAAAATG +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKEWAQT*ALRDKM
Trigger: CATTTTGTCTCTTAGTGCGCATGTTTGAGCCCACTC...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAAAGAGAGCTAGGAAGTTaGCAGGCAAAGGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQRELGS*QAKVCS
Trigger: GGAACAGACCTTTGCCTGCCAACTTCCTAGCTCTCT...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGCCTCGGGCTCTaGGGCATGGACTGTGCGACT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIPGLGL*GMDCAT
Trigger: AGTCGCACAGTCCATGCCCCAGAGCCCGAGGCCAGG...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCGGAGTCAGATTCCGTaGGGGATGGCTCGAACCTGG +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFRSQIP*GMARTW
Trigger: CCAGGTTCGAGCCATCCCTCACGGAATCTGACTCCG...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTCAGGCAGATGGTCACTaGCAGGTTTTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFQADGH*QVFAFL
Trigger: AAGAAAAGCAAAAACCTGGCAGTGACCATCTGCCTG...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR GCA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCACATAAACAGGAGCATTaGCAAGTAGAAGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPHKQEH*QVEVVG
Trigger: TCCAACAACTTCTACTTGGCAATGCTCCTGTTTATG...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCAGGACCCTTGCAAGCTaGAAGCGCAGCGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFRTLAS*KRSVVL
Trigger: CAGGACCACGCTGCGCTTCCAGCTTGCAAGGGTCCT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTGCAAAGAAGGTGGTaGAATCTATCCAATGACTTG +
Preference number: 4 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLLQRRW*NLSNDL
Trigger: CAAGTCATTGGATAGATTCCACCACCTTCTTTGCAA...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAATCTGCATTTTGAGCTaGTGGTTGCTGAGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKICILS*WLLSFR
Trigger: TCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGAT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATTGGTGCTTTCTTCCTaGGTCTGGATTCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPLVLSS*VWIRAS
Trigger: AGAAGCCCGAATCCAGACCCAGGAAGAAAGCACCAA...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACGGGATGGCTCGAACCTaGGCTTCCCTCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHGMART*ASLWAS
Trigger: TGAAGCCCAGAGGGAAGCCCAGGTTCGAGCCATCCC...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAACGCCAGATCCAAAATaGCTCTCGATTTTCTTTATC +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKTPDPK*LSIFFI
Trigger: GATAAAGAAAATCGAGAGTCATTTTGGATCTGGCGT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAAACCATCTCAAGAATATaGAATAGGAGGCAACGCCAG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQTISRI*NRRQRQ
Trigger: CTGGCGTTGCCTCCTATTTCATATTCTTGAGATGGT...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTGAGCTCTGCACCTGCTaGTTGGTAGCCTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSELCTC*LVASGP
Trigger: AGGACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTC...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCAGCTCCTTCTTCGACTaGTCCAGCTTCTGGGACCGG +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFSSFFD*SSFWDR
Trigger: CCGGTCCCAGAAGCTGGAGCAGTCGAAGAAGGAGCT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTGGCTGTGGGTGACCTaGAGGTACTGGTCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIWLWVT*RYWSAL
Trigger: CAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCACGGTGTCCAGGTCTTaGGCAGACGAAACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFTVSRS*ADETCS
Trigger: GGAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTTGGTTGCAAAGAAGGTaGTGGAATCTATCCAATGAC +
Preference number: 4 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFWLQRR*WNLSND
Trigger: GTCATTGGATAGATTCCACCACCTTCTTTGCAACCA...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACCAAAGTCGAGGCCTGTaGTCCACGGTGAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHQSRGL*STVRRV
Trigger: AACCCTCCTCACCGTGGACCACAGGCCTCGACTTTG...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACTCTGGGCACATAGGCTaGCCTCTCAAGGTGACCCTC +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHSGHIG*PLKVTL
Trigger: GAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGA...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCAGATTCCGTGAGGGATaGCTCGAACCTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFRFREG*LEPGLP
Trigger: GGGAAGCCCAGGTTCGAGCCATCCCTCACGGAATCT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCAACCTGCCCTGGCTGTaGGTGACCTGCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHINLPWL*VTCRYW
Trigger: CCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTT...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATGGTGCTATCATGGTaGCGAGGGAGACCACCACAC +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHMVLSW*RGRPPH
Trigger: GTGTGGTGGTCTCCCTCGTCACCATGATAGCACCAT...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACTCCACAATGTCACCTaGAGCATCTATCTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQLHNVT*SIYLEM
Trigger: CATTTCAAGATAGATGCTTCAGGTGACATTGTGGAG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATCTGCAGCGAATGTTTaGCATGAGATCTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQSAANV*HEIFLE
Trigger: TTCCAGAAAGATCTCATGGCAAACATTCGCTGCAGA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTTTCCGCCAGAGCTCTaGACCTGCTGCTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIFPPEL*TCCLVA
Trigger: GGCTACCAAGCAGCAGGTGCAGAGCTCTGGCGGAAA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACTGGGCAGACGAAACCTaGTCCTTGGGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHWADET*SLGMVF
Trigger: GAAGACCATCCCCAAGGAGCAGGTTTCGTCTGCCCA...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGCAGCACAAGGACCCTTaGAAGCTGGAAGCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLQHKDP*KLEAQR
Trigger: ACGCTGCGCTTCCAGCTTGCAAGGGTCCTTGTGCTG...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAATGGAACTGTATATTCTaGAAGATTTGTTCCGGATCA +
Preference number: 4 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKWNCIF*KICSGS
Trigger: TGATCCGGAACAAATCTTCCAGAATATACAGTTCCA...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTGGTAGCCTCGGGTCCTaGTCAGCCTCCCTTCAAACT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSGSLGS*SASLQT
Trigger: AGTTTGAAGGGAGGCTGACCAGGACCCGAGGCTACC...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCGTGCTTCCAAAGGGCTaGCCTGCAATCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFVLPKG*PAISSG
Trigger: TCCAGAGCTGATTGCAGGCCAGCCCTTTGGAAGCAC...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACAGCGTGGTCCTGGGGTaGTACATCTCTAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHSVVLG*YISKAA
Trigger: TGCTGCCTTAGAGATGTACCACCCCAGGACCACGCT...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATATAAGCTGAAATGCTaGTCTCTTCCAAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPYKLKC*SLPRPM
Trigger: CATGGGCCTTGGAAGAGACCAGCATTTCAGCTTATA...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTGCGCTGAGGACAGCTaGCTGGTAAGATCACTGTCG +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFCAEDS*LVRSLS
Trigger: CGACAGTGATCTTACCAGCCAGCTGTCCTCAGCGCA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCACGTTGCCGTTGTTTTaGGGTGTGCCCGAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHITLPLF*GVPECA
Trigger: AGCGCACTCGGGCACACCCCAAAACAACGGCAACGT...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTCAAAGTCGAGGCCTGTaGTCCACGGTGAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSQSRGL*STVRRV
Trigger: AACCCTCCTCACCGTGGACCACAGGCCTCGACTTTG...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGGGATCGTGGCTTTCTaGGCACATAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIGIVAF*AHRLAS
Trigger: AGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGGGGATCGTGGCTTTCTaGGCACATAGGCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLGIVAF*AHRLAS
Trigger: AGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCC...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCATGGTGCTATCATGGTaGCGAGGGAGACCACCACAC +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIMVLSW*RGRPPH
Trigger: GTGTGGTGGTCTCCCTCGTCACCATGATAGCACCAT...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCCTCGGAAGAAGTCTATaGGCAGAATGCTCGCCACGG +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHILGRSL*AECSPR
Trigger: CCGTGGCGAGCATTCTGCTCATAGACTTCTTCCGAG...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACTTTTTCTTATCCTCTaGTCTTGCGTTTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQLFLIL*SCVLDL
Trigger: CAGATCCAAAACGCAAGATCAGAGGATAAGAAAAAG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGGGGAAGAGACCGTTTaGTCCAATCTCTGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIGEETV*SNLCLA
Trigger: CGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACATAAACAGGAGCATTaGCAAGTAGAAGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQHKQEH*QVEVVG
Trigger: TCCAACAACTTCTACTTGGCAATGCTCCTGTTTATG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGTCACTGCTGGATGCTaGCGACACGGAGTCAGATTC +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIVTAGC*RHGVRF
Trigger: GAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGAC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTACGAAACCTGCTCCTTaGGGATGGTCTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSTKPAP*GWSSWL
Trigger: CAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGT...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAAGGTATAGTTTTCATTaGAAGCACTGGCAAGACTCG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPRYSFH*KHWQDS
Trigger: CGAGTCTTGCCAGTGCTTCCAATGAAAACTATACCT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATTGCAAAGAAGGTGGTaGAATCTATCCAATGACTTG +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQLQRRW*NLSNDL
Trigger: CAAGTCATTGGATAGATTCCACCACCTTCTTTGCAA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTCCAGCACTGGTCTTGTaGACTCTGAGTGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSPALVL*TLSVEA
Trigger: AGCCTCCACACTCAGAGTCCACAAGACCAGTGCTGG...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCGAAATACTTGCTGGTaGGGCACATTGCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFRNTCW*GTLQVS
Trigger: GCTGACCTGCAATGTGCCCCACCAGCAAGTATTTCG...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCGCTCGAAATACTTGCTaGTGGGGCACATTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFARNTC*WGTLQV
Trigger: GACCTGCAATGTGCCCCACCAGCAAGTATTTCGAGC...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACCAAGTAGAAGTTGTTaGATCTTGAGGCTCGAAATA +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQPSRSC*ILRLEI
Trigger: TATTTCGAGCCTCAAGATCCAACAACTTCTACTTGG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACCTAGGAACGGGACACTaGAGGAAGCCTAGACATCTG +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHLGTGH*RKPRHL
Trigger: CAGATGTCTAGGCTTCCTCCAGTGTCCCGTTCCTAG...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGCCTCTGGGTTTCCAATaGGGTAATCCCAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLPLGFQ*GNPRHR
Trigger: TCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGG...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACGGGAGACCACCACACTaGCCTCATTCTTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHGRPPH*PHSFPK
Trigger: TTTGGGAAAAGAATGAGGTCAGTGTGGTGGTCTCCC...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR TCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCACTTTTTCTTATCCTCTaGTCTTGCGTTTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPLFLIL*SCVLDL
Trigger: CAGATCCAAAACGCAAGATCAGAGGATAAGAAAAAG...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTTGGCATTTCTCCGGATaGCTCTATAGCGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSWHFSG*LYSAGM
Trigger: CATCCCAGCGCTATAGAGGCATCCGGAGAAATGCCA...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATGTACATCTTCGATGTaGGTTGTAAATGTCATAGGT +
Preference number: 4 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQCTSSM*VVNVIG
Trigger: ACCTATGACATTTACAACGCACATCGAAGATGTACA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACGAGAACGTTGAACGCTaGGAGACATGGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHENVER*ETWGEE
Trigger: TTCTTCTCCCCATGTCTCCCAGCGTTCAACGTTCTC...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAAATAGCAAAAATGGTTaGCAGCATGCACAGAAACAG +
Preference number: 4 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPNSKNG*QHAQKQ
Trigger: CTGTTTCTGTGCATGCTGCCAACCATTTTTGCTATT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTTCCTGTGAAGGTCACTaGTGCTTGCACACAGACCGT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSSCEGH*CLHTDR
Trigger: ACGGTCTGTGTGCAAGCACCAGTGACCTTCACAGGA...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCATTGTCGCACGTTCCTaGGGTACAGCTCCACAATGT +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFIVARS*GTAPQC
Trigger: ACATTGTGGAGCTGTACCCCAGGAACGTGCGACAAT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCCTTCAGAGGGGGCTGTaGGTATTGGAAATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHILQRGL*VLEIPG
Trigger: TCCCGGAATTTCCAATACCCACAGCCCCCTCTGAAG...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTGTCATCCAAGTTGCTaGGCAGCAGAGATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHICHPSC*AAEIPG
Trigger: ACCAGGAATCTCTGCTGCTCAGCAACTTGGATGACA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTGGTATAAGCTGAAATaGTGGTCTCTTCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFWYKLK*WSLPRP
Trigger: GGGCCTTGGAAGAGACCAGCATTTCAGCTTATACCA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGTCCGAGGTTTCTGAATaGAAGCAGCGGAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLSEVSE*KQRSLL
Trigger: GAGCAAACTCCGCTGCTTCCATTCAGAAACCTCGGA...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTTTTCATTGGAAGCACTaGCAAGACTCGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSFHWKH*QDSCGS
Trigger: ACTCCCGCACGAGTCTTGCCAGTGCTTCCAATGAAA...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTTTCATTGGAAGCACTaGCAAGACTCGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIFHWKH*QDSCGS
Trigger: ACTCCCGCACGAGTCTTGCCAGTGCTTCCAATGAAA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACTTCCAGGCCGAGATGTaGACCATTTCTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHFQAEM*TISLLQ
Trigger: CTGAAGAAGAGAAATGGTCCACATCTCGGCCTGGAA...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGTTGGTGCTTTCTTCCTaGGTCTGGATTCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLLVLSS*VWIRAS
Trigger: AGAAGCCCGAATCCAGACCCAGGAAGAAAGCACCAA...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCATTGTCGCACGTTCCTaGGGTACAGCTCCACAATGT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIIVARS*GTAPQC
Trigger: ACATTGTGGAGCTGTACCCCAGGAACGTGCGACAAT...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGTGTCCAGGAGAGCAATaGTCAGGCTGTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLCPGEQ*SGCRDF
Trigger: GAAATCTCTACAGCCTGATCATTGCTCTCCTGGACA...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR TCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTTGTCCAGGAGAGCAATaGTCAGGCTGTAGAGATTTC +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSCPGEQ*SGCRDF
Trigger: GAAATCTCTACAGCCTGATCATTGCTCTCCTGGACA...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCCGATCTTCCTCTCCCTaGCGTAATATCCGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIRSSSP*RNIRRR
Trigger: TCTTCTACGGATATTACGGCAGGGAGAGGAAGATCG...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTAGCTGTTTTGCTCTCTaGAGCCTCTGGGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSSCFAL*SLWVSN
Trigger: ATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCT...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCACCACCACACTGACCTaGTCATTCTTTTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFTTTLT*SFFSQS
Trigger: ACTTTGGGAAAAGAATGAGCAGGTCAGTGTGGTGGT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558726.5
CDS-3UTR TCA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACAGCGAATGTTTGCCATaGGATCTTTCTGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHSECLP*DLSGTV
Trigger: TACAGTTCCAGAAAGATCTCATGGCAAACATTCGCT...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTTTGTTCCGGATCATTaGTGTCCCCTGTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIFVPDH*CPLFHQ
Trigger: CTGATGAAACAGGGGACAGCAATGATCCGGAACAAA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTCATATTCAGGAAACTTaGTCTCCAGATCCCAACACC +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSHIQET*SPDPNT
Trigger: GGTGTTGGGATCTGGAGAGCAAGTTTCCTGAATATG...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGTACCTGTTAGTTTCATaGTCTAGCCTGGATTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLYLLVS*SSLDLG
Trigger: CCCCAAATCCAGGCTAGAGCATGAAACTAACAGGTA...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTCTTGCACACAGACCGTaGAGATACCTGTTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSLAHRP*RYLLVS
Trigger: TGAAACTAACAGGTATCTGCACGGTCTGTGTGCAAG...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp GTTTTACGTTCTTTCATTCCTGCTTTAAAGCTTTTCAGTAAACTTTCATGCCTGTCAAAGGTCAAACAGTaGACTGGATCTCTCAAGTCG +
Preference number: 4 (lower is better)
Translates to: VLRSFIPALKLFSKLSCLSKVKQ*TGSLKS
Trigger: CGACTTGAGAGATCCAGTGCACTGTTTGACCTTTGA...CAGGCATGAAAGTTTACTGAAAAGCTTTAAAGCAGGAATGAAAGAACGTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGCCTGCAATCAGCTCTaGAATGACAATAAAAGCACC +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIACNQL*NDNKST
Trigger: GGTGCTTTTATTGTCATTCCAGAGCTGATTGCAGGC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCTGGTTGCAAAGAAGGTaGTGGAATCTATCCAATGAC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFWLQRR*WNLSND
Trigger: GTCATTGGATAGATTCCACCACCTTCTTTGCAACCA...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCAAGATCACTGTCGTTTaGAAGCTTCTTGGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFKITVV*KLLGAF
Trigger: GAAAGCACCAAGAAGCTTCCAAACGACAGTGATCTT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCATCTGCATTTTGAGCTaGTGGTTGCTGAGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIICILS*WLLSFR
Trigger: TCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGAT...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR GCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGTAAACTTTCATGCCTaGTCTAAAACTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIVNFHA*SKTCLS
Trigger: ACTGAGGCAAGTTTTAGAGCAGGCATGAAAGTTTAC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGCCATGAGATCTTTCTaGAACTGTATATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIAMRSF*NCIFWK
Trigger: CTTCCAGAATATACAGTTCCAGAAAGATCTCATGGC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CCA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTAATAGCAAAAATGGTTaGCAGCATGCACAGAAACAG +
Preference number: 4 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSNSKNG*QHAQKQ
Trigger: CTGTTTCTGTGCATGCTGCCAACCATTTTTGCTATT...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp GCCTTCCTCCTGCTGGGCTGGCCCACGGACCTCGGGAACCTGCCCTaGCTGTGGGTGACCTGCAGGTACTGGTCAGCGCTGCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AFLLLGWPTDLGNLP*LWVTCRYWSALLFC
Trigger: GCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCCAGCCCAGCAGGAGGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp TGCTGGGCTGGCCCACGGACCTCGGGAACCTGCCCTGGCTGTGGGTaGCCTGCAGGTACTGGTCAGCGCTGCTGTTCTGCTGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: CWAGPRTSGTCPGCG*PAGTGQRCCSAGHC
Trigger: GCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCCAGCCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp CTCCTGCTGGGCTGGCCCACGGACCTCGGGAACCTGCCCTGGCTGTaGGTGACCTGCAGGTACTGGTCAGCGCTGCTGTTCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LLLGWPTDLGNLPWL*VTCRYWSALLFCWS
Trigger: TGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCCAGCCCAGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp GGCTGGCCCACGGACCTCGGGAACCTGCCCTGGCTGTGGGTGACCTaGAGGTACTGGTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: GWPTDLGNLPWLWVT*RYWSALLFCWSLLD
Trigger: ATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp ACGGACCTCGGGAACCTGCCCTGGCTGTGGGTGACCTGCAGGTACTaGTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGATGCTGCCGAC +
Preference number: 5 (lower is better)
Translates to: TDLGNLPWLWVTCRY*SALLFCWSLLDAAD
Trigger: GTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp CCCTGGCTGTGGGTGACCTGCAGGTACTGGTCAGCGCTGCTGTTCTaGTGGTCACTGCTGGATGCTGCCGACACGGAGTCAGATTCCGTG +
Preference number: 5 (lower is better)
Translates to: PWLWVTCRYWSALLF*WSLLDAADTESDSV
Trigger: CACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGACAGCACAAGGACCCTaGCAAGCTGGAAGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGTAQGP*QAGSAA
Trigger: CGCTGCGCTTCCAGCTTGCAAGGGTCCTTGTGCTGT...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATGCTGGTGGGGCACATaGCAGGTCAGCACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRCWWGT*QVSTAQ
Trigger: CTGGGCTGTGCTGACCTGCAATGTGCCCCACCAGCA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGCACGTTGCCGTTGTTTaGGGGTGTGCCCGAGTGCGC +
Preference number: 5 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRHVAVV*GCARVR
Trigger: GCGCACTCGGGCACACCCCAAAACAACGGCAACGTG...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp CTGGCCTCGGGCTCTGGGGCATGGACTGTGCGACTGTCTCTATCCTaGCACTCTTGCTGCTCCCTGAGTCAAAATGGGCCACGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: LASGSGAWTVRLSLS*HSCCSLSQNGPRCR
Trigger: ACGGCAACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCGCACAGTCCATGCCCCAGAGCCCGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp CAGGTACTGGTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGATGCTaGCGACACGGAGTCAGATTCCGTGAGGGATGGCTCGAACCTGGG +
Preference number: 5 (lower is better)
Translates to: QVLVSAAVLLVTAGC*RHGVRFREGWLEPG
Trigger: CCCAGGTTCGAGCCATCCCTCACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp TGGCTGTGGGTGACCTGCAGGTACTGGTCAGCGCTGCTGTTCTGCTaGTCACTGCTGGATGCTGCCGACACGGAGTCAGATTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: WLWVTCRYWSALLFC*SLLDAADTESDSVR
Trigger: CCTCACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGGACGAAACCTGCTCCTaGGGGATGGTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGDETCS*GMVFLA
Trigger: AGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGTC...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGGACCCGGGATGCATATaGTCGCACGTTCCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGDPGCI*SHVPGV
Trigger: TACCCCAGGAACGTGCGACAATATGCATCCCGGGTC...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGAGGGGGCTGTGGGTATaGGAAATTCCGGGATCGTGG +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGRGLWV*EIPGSW
Trigger: CCACGATCCCGGAATTTCCAATACCCACAGCCCCCT...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp CTGCAGGTACTGGTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGATaGTGCCGACACGGAGTCAGATTCCGTGAGGGATGGCTCGAACCT +
Preference number: 5 (lower is better)
Translates to: LQVLVSAAVLLVTAG*CRHGVRFREGWLEP
Trigger: AGGTTCGAGCCATCCCTCACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp GAGACCAGACGGTGTCCAGGTCTTGGGCAGACGAAACCTGCTCCTTaGGGATGGTCTTCCTGGCTGTGCTTCCAAAGGGCTGGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: ETRRCPGLGQTKPAP*GWSSWLCFQRAGLQ
Trigger: TTGCAGGCCAGCCCTTTGGAAGCACAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGTCTGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp GGATGGCTCGAACCTGGGCTTCCCTCTGGGCTTCAGAGGGGGCTGTaGGTATTGGAAATTCCGGGATCGTGGCTTTCTGGGCACATAGGC +
Preference number: 5 (lower is better)
Translates to: GWLEPGLPSGLQRGL*VLEIPGSWLSGHIG
Trigger: GCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTGAAGCCCAGAGGGAAGCCCAGGTTCGAGCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACGAAACCTGCTCCTaGGGGATGGTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREEREDETCS*GMVFLA
Trigger: AGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGTC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCACGTTGCCGTTGTTTaGGGGTGTGCCCGAGTGCGC +
Preference number: 5 (lower is better)
Translates to: PREEREESWGEATQDPGSHVAVV*GCARVR
Trigger: GCGCACTCGGGCACACCCCAAAACAACGGCAACGTG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp AGACGGTGTCCAGGTCTTGGGCAGACGAAACCTGCTCCTTGGGGATaGTCTTCCTGGCTGTGCTTCCAAAGGGCTGGCCTGCAATCAGCT +
Preference number: 5 (lower is better)
Translates to: RRCPGLGQTKPAPWG*SSWLCFQRAGLQSA
Trigger: AGCTGATTGCAGGCCAGCCCTTTGGAAGCACAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGACTATGGCAGCTGTTTaGCTCTCTGCAGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRTMAAV*LSAASG
Trigger: CCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGT...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAACAGGGGCTGTCCTGGTaGCAAAGAAGGTGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREEREQGLSW*QRRWWN
Trigger: ATTCCACCACCTTCTTTGCAACCAGGACAGCCCCTG...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGTGCTGGTGGGGCACATaGCAGGTCAGCACAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRCWWGT*QVSTAQ
Trigger: CTGGGCTGTGCTGACCTGCAATGTGCCCCACCAGCA...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAGACCCGGGATGCATATaGTCGCACGTTCCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: ACGQPTPREEREESWGEADPGCI*SHVPGV
Trigger: TACCCCAGGAACGTGCGACAATATGCATCCCGGGTC...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGGTCTCTCCTTCTGTCTaGAGCCCCTCTGCCAAATTC +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGVSPSV*SPSAKF
Trigger: GAATTTGGCAGAGGGGCTCAAGACAGAAGGAGAGAC...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp GAGCCCGACGGAGGTCTATCAGGGAGCGTGGGGGAAGAGACCGTTTaGTCCAATCTCTGCTTGGCGTCTCCTCCTCTTCTTCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: EPDGGLSGSVGEETV*SNLCLASPPLLHSA
Trigger: AGCTGAGTGAAGAAGAGGAGGAGACGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGACCTCCGTCGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp AGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTaGCCTCTAGGAACGGGACACTGGAGGAAGCCTAGACATCTGAAC +
Preference number: 5 (lower is better)
Translates to: RKGDAMCWPSTPTGA*PLGTGHWRKPRHLN
Trigger: GTTCAGATGTCTAGGCTTCCTCCAGTGTCCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp TTCATTAATGACATAGTATCTGGGGGCGTGGGGCCTGGGACCCTGTaGCAGCAAAGTCGAGGCCTGTGGTCCACGGTGAGGAGGGTTGAT +
Preference number: 5 (lower is better)
Translates to: FINDIVSGGVGPGTL*QQSRGLWSTVRRVD
Trigger: ATCAACCCTCCTCACCGTGGACCACAGGCCTCGACTTTGCTGGCACAGGGTCCCAGGCCCCACGCCCCCAGATACTATGTCATTAATGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp CTCTTGCTGCTCCCTGAGTCAAAATGGGCCACGTTGCCGTTGTTTTaGGGTGTGCCCGAGTGCGCTGAGGACAGCTGGCTGGTAAGATCA +
Preference number: 5 (lower is better)
Translates to: LLLLPESKWATLPLF*GVPECAEDSWLVRS
Trigger: TGATCTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCAAAACAACGGCAACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGGACGGTGTCCAGGTCTaGGGCAGACGAAACCTGCTC +
Preference number: 5 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRDGVQV*GRRNLL
Trigger: GAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGTC...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAATCCAAGGCCCATGTGTaGTTTCTCCTGAGCCCCATT +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREERESKAHV*FLLSPI
Trigger: AATGGGGCTCAGGAGAAACAACACATGGGCCTTGGA...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGATGAGTTTGAGAACGTaGAACGCTGGGAGACATGGG +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGMSLRT*NAGRHG
Trigger: CCCATGTCTCCCAGCGTTCAACGTTCTCAAACTCAT...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTCGTTTGGAAGCTTCTaGGTGCTTTCTTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGSFGSF*VLSSWV
Trigger: GACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACGA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp AGCACAAGGACCCTTGCAAGCTGGAAGCGCAGCGTGGTCCTGGGGTaGTACATCTCTAAGGCAGCAATGAGGTCAAAGGCTGATGGTGCT +
Preference number: 5 (lower is better)
Translates to: STRTLASWKRSVVLG*YISKAAMRSKADGA
Trigger: AGCACCATCAGCCTTTGACCTCATTGCTGCCTTAGAGATGTACCACCCCAGGACCACGCTGCGCTTCCAGCTTGCAAGGGTCCTTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp TCTGGGCTTCAGAGGGGGCTGTGGGTATTGGAAATTCCGGGATCGTaGCTTTCTGGGCACATAGGCTGGCCTCTCAAGGTGACCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SGLQRGLWVLEIPGS*LSGHIGWPLKVTLK
Trigger: TTTGAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTGAAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGTGGAAGCAGCGGAGTTaGCTCTGCCCGCTAGTTCTC +
Preference number: 5 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRWKQRS*LCPLVL
Trigger: GAGAACTAGCGGGCAGAGCAAACTCCGCTGCTTCCA...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTTTTGGATCTGCATTTaGAGCTGGTGGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGFWICI*SWWLLS
Trigger: GCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCATGGGCCACGTTGCCGTaGTTTTGGGGTGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPWATLP*FWGVPE
Trigger: CTCGGGCACACCCCAAAACAACGGCAACGTGGCCCA...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp ATTTCCGCCAGAGCTCTGCACCTGCTGCTTGGTAGCCTCGGGTCCTaGTCAGCCTCCCTTCAAACTTCAGCACAATGTTCTTCGCTTGTC +
Preference number: 5 (lower is better)
Translates to: ISARALHLLLGSLGS*SASLQTSAQCSSLV
Trigger: GACAAGCGAAGAACATTGTGCTGAAGTTTGAAGGGAGGCTGACCAGGACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTCTGGCGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAACTCTGCACCTGCTGCTaGGTAGCCTCGGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKLCTCC*VASGPG
Trigger: ACCAGGACCCGAGGCTACCAAGCAGCAGGTGCAGAG...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAAGAAGCACCAGGATGTaGGCAATAATCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: ACGQPTPREEREESWGEARSTRM*AIILRQ
Trigger: CTGCCTGAGGATTATTGCCAACATCCTGGTGCTTCT...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGATGGAGGCTAGTCTTGTaGGCCTTTATAAGAGGCATG +
Preference number: 5 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRWRLVL*AFIRGM
Trigger: CATGCCTCTTATAAAGGCCAACAAGACTAGCCTCCA...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGACCATATTCAGGAAACTaGCTCTCCAGATCCCAACAC +
Preference number: 5 (lower is better)
Translates to: SRPLLRMRTAHPKGRKGRPYSGN*LSRSQH
Trigger: GTGTTGGGATCTGGAGAGCAAGTTTCCTGAATATGG...TCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCATCGTTTGGAAGCTTCTaGGTGCTTTCTTCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: ACGQPTPREEREESWGEASFGSF*VLSSWV
Trigger: GACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACGA...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCGTCTCTCCTTCTGTCTaGAGCCCCTCTGCCAAATTC +
Preference number: 5 (lower is better)
Translates to: PREEREESWGEATQDPGSVSPSV*SPSAKF
Trigger: GAATTTGGCAGAGGGGCTCAAGACAGAAGGAGAGAC...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp GCAGAGATTCCTGGTAGAGGTAGCACTGGCTGGCATTTCTCCGGATaGCTCTATAGCGCTGGGATGCCTTCGAGGTTTTCATGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: AEIPGRGSTGWHFSG*LYSAGMPSRFSWEL
Trigger: TAGCTCCCATGAAAACCTCGAAGGCATCCCAGCGCTATAGAGGCATCCGGAGAAATGCCAGCCAGTGCTACCTCTACCAGGAATCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp CCTGATGCTGTTCACTATGGCAGCTGTTTTGCTCTCTGCAGCCTCTaGGTTTCCAATGAGGTAATCCCAGGCACAGAACACCCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PDAVHYGSCFALCSL*VSNEVIPGTEHPPA
Trigger: TGCTGGCGGGTGTTCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGTGAACAGCATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp ACGTTGCCGTTGTTTTGGGGTGTGCCCGAGTGCGCTGAGGACAGCTaGCTGGTAAGATCACTGTCGTTTGGAAGCTTCTTGGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: TLPLFWGVPECAEDS*LVRSLSFGSFLVLS
Trigger: AGAAAGCACCAAGAAGCTTCCAAACGACAGTGATCTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCAAAACAACGGCAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp CCCAATATAAAAATGAGGAGCCCGACGGAGGTCTATCAGGGAGCGTaGGGGAAGAGACCGTTTGATCCAATCTCTGCTTGGCGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PNIKMRSPTEVYQGA*GKRPFDPISAWRLL
Trigger: GAGGAGACGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGACCTCCGTCGGGCTCCTCATTTTTATATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp ACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGCAGAGAGCTAGGAAGTaGGCAGGCAAAGGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: TSFSRKGDAMCWPSTPTGQRARK*AGKGLF
Trigger: GAACAGACCTTTGCCTGCCAACTTCCTAGCTCTCTG...CCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTGAAGGTCACTGGTGCTaGCACACAGACCGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: KWSIPLVREEPRVSACTTEGHWC*HTDRAD
Trigger: ATCTGCACGGTCTGTGTGCAAGCACCAGTGACCTTC...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTAGGGGGCTGTGGGTATaGGAAATTCCGGGATCGTGG +
Preference number: 5 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLRGLWV*EIPGSW
Trigger: CCACGATCCCGGAATTTCCAATACCCACAGCCCCCT...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CAA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAAGGCAAGTATTGAGATaGCTGCAGACCCGTGATGAT +
Preference number: 5 (lower is better)
Translates to: ACGQPTPREEREESWGEARQVLR*LQTRDD
Trigger: ATCATCACGGGTCTGCAGCAATCTCAATACTTGCCT...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp CAGAGAGCTAGGAAGTTGGCAGGCAAAGGTCTGTTCCGAGGTTTCTaGATGGAAGCAGCGGAGTTTGCTCTGCCCGCTAGTTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: QRARKLAGKGLFRGF*MEAAEFALPASSQE
Trigger: TTCCTGAGAACTAGCGGGCAGAGCAAACTCCGCTGCTTCCATTCAGAAACCTCGGAACAGACCTTTGCCTGCCAACTTCCTAGCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp TGGTGGCCTTGCACCATAGTGGGTGGCCAAGAGTCACAGAAACCTTaGAGATGTGACTTCACTTGTATTCCCACGCTGGCGGGATCTCAG +
Preference number: 5 (lower is better)
Translates to: WWPCTIVGGQESQKP*RCDFTCIPTLAGSQ
Trigger: CTGAGATCCCGCCAGCGTGGGAATACAAGTGAAGTCACATCTTCAAGGTTTCTGTGACTCTTGGCCACCCACTATGGTGCAAGGCCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CCA 90 bp GAGCTAGGAAGTTGGCAGGCAAAGGTCTGTTCCGAGGTTTCTGAATaGAAGCAGCGGAGTTTGCTCTGCCCGCTAGTTCTCAGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ELGSWQAKVCSEVSE*KQRSLLCPLVLRKK
Trigger: CTTCTTCCTGAGAACTAGCGGGCAGAGCAAACTCCGCTGCTTCCATTCAGAAACCTCGGAACAGACCTTTGCCTGCCAACTTCCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp TCAGAGGGGGCTGTGGGTATTGGAAATTCCGGGATCGTGGCTTTCTaGGCACATAGGCTGGCCTCTCAAGGTGACCCTCAAAATCTTCAT +
Preference number: 5 (lower is better)
Translates to: SEGAVGIGNSGIVAF*AHRLASQGDPQNLH
Trigger: ATGAAGATTTTGAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTATATTCTGGAAGATTaGTTCCGGATCATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGYILED*FRIIAV
Trigger: GACAGCAATGATCCGGAACAAATCTTCCAGAATATA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACAGCACAAGGACCCTaGCAAGCTGGAAGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFTAQGP*QAGSAA
Trigger: CGCTGCGCTTCCAGCTTGCAAGGGTCCTTGTGCTGT...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAAGAAGTTGTTGGATCTaGAGGCTCGAAATACTTGCT +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREERERSCWI*RLEILA
Trigger: AGCAAGTATTTCGAGCCTCAAGATCCAACAACTTCT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGTCATAAATTTTCTCTaGTCCACTGAATGGCCCACA +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREEREVINFL*STEWPT
Trigger: TGTGGGCCATTCAGTGGACAAGAGAAAATTTATGAC...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCTTTTGGATCTGCATTTaGAGCTGGTGGTTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PREEREESWGEATQDPGSFWICI*SWWLLS
Trigger: GCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAA...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAACGGGTCTTATCCTCTGATCTaGCGTTTTGGATCTGCATTT +
Preference number: 5 (lower is better)
Translates to: RCHVLAQHSNRGLTSRNGSYPLI*RFGSAF
Trigger: AAATGCAGATCCAAAACGCAAGATCAGAGGATAAGA...CCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCACCTGAAGCATCTATCTaGAAATGTCTTTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: ACGQPTPREEREESWGEAPEASI*KCLSGQ
Trigger: CTGGCCAGAAAGACATTTCAAGATAGATGCTTCAGG...TGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAAAGGTCTCTAACACACTaGTTCACCTCTTTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREERERSLTH*FTSFSR
Trigger: TCTGGAAAAAGAGGTGAACAAGTGTGTTAGAGACCT...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTGACCTCTAGGAGGTCTCTAACACACTaGTTCACCTCTTTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KGRCHVLAQHSNRGLTSRRSLTH*FTSFSR
Trigger: TCTGGAAAAAGAGGTGAACAAGTGTGTTAGAGACCT...CCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATCTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp TCACTATGGCAGCTGTTTTGCTCTCTGCAGCCTCTGGGTTTCCAATaGGGTAATCCCAGGCACAGAACACCCGCCAGCAGAAGGTATAGT +
Preference number: 5 (lower is better)
Translates to: SLWQLFCSLQPLGFQ*GNPRHRTPASRRYS
Trigger: ACTATACCTTCTGCTGGCGGGTGTTCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCATCCAAGGCCCATGTGTaGTTTCTCCTGAGCCCCATT +
Preference number: 5 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPSKAHV*FLLSPI
Trigger: AATGGGGCTCAGGAGAAACAACACATGGGCCTTGGA...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AAATGGAGCATTCCCCTGGTAAGGGAAGAACCTCGAGTGAGCGCGTGCACAACTGTGTGGAGGCTAGTCTaGTTGGCCTTTATAAGAGGC +
Preference number: 5 (lower is better)
Translates to: KWSIPLVREEPRVSACTTVWRLV*LAFIRG
Trigger: GCCTCTTATAAAGGCCAACAAGACTAGCCTCCACAC...AGTTGTGCACGCGCTCACTCGAGGTTCTTCCCTTACCAGGGGAATGCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTCTCCCAGCACTGGTCTaGTGGACTCTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFLPALV*WTLSVE
Trigger: CTCCACACTCAGAGTCCACAAGACCAGTGCTGGGAG...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS-3UTR CAA 90 bp CTAGCAGGCCACTACTGCGCATGCGGACAGCCCACCCCAAGGGAAGAAAGGGAACTAACTCGGATAAATTaGGCTAACAGTAGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LAGHYCACGQPTPREERELTRIN*ANSSCR
Trigger: TCTACAGCTACTGTTAGCCAAATTTATCCGAGTTAG...TTCCCTTTCTTCCCTTGGGGTGGGCTGTCCGCATGCGCAGTAGTGGCCTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp GGACCGGTCCACCACAAAGTAGATGAGATAAATGCTCCCAGCCAGTaGGAGAAGCACCAGGATGTTGGCAATAATCCTCAGGCAGATGGT +
Preference number: 5 (lower is better)
Translates to: GPVHHKVDEINAPSQ*EKHQDVGNNPQADG
Trigger: ACCATCTGCCTGAGGATTATTGCCAACATCCTGGTGCTTCTCTCACTGGCTGGGAGCATTTATCTCATCTACTTTGTGGTGGACCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS TCA 90 bp AAGCTGAAATGCTGGTCTCTTCCAAGGCCCATGTGTTGTTTCTCCTaGGCCCCATTCCAGGCCGAGATGTGGACCATTTCTCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: KLKCWSLPRPMCCFS*APFQAEMWTISLLQ
Trigger: CTGAAGAAGAGAAATGGTCCACATCTCGGCCTGGAATGGGGCTCAGGAGAAACAACACATGGGCCTTGGAAGAGACCAGCATTTCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS TCA 90 bp CCTGTGCCAGCAAAGTCGAGGCCTGTGGTCCACGGTGAGGAGGGTTaGTTTGCTGAAAGTCTTTTCGGAAAAGAGGTTCTGAGTGTACAT +
Preference number: 5 (lower is better)
Translates to: PVPAKSRPVVHGEEG*FAESLFGKEVLSVH
Trigger: ATGTACACTCAGAACCTCTTTTCCGAAAAGACTTTCAGCAAATCAACCCTCCTCACCGTGGACCACAGGCCTCGACTTTGCTGGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp CTTCAGCATCTCCTGACCAACGTATGTCTCCCAGCACTGGTCTTGTaGACTCTGAGTGTGGAGGCTAGTCTTGTTGGCCTTTATAAGAGG +
Preference number: 5 (lower is better)
Translates to: LQHLLTNVCLPALVL*TLSVEASLVGLYKR
Trigger: CCTCTTATAAAGGCCAACAAGACTAGCCTCCACACTCAGAGTCCACAAGACCAGTGCTGGGAGACATACGTTGGTCAGGAGATGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAAAGCTGTCATCCAAGTaGCTGAGCAGCAGAGATTCC +
Preference number: 5 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPKLSSK*LSSRDS
Trigger: GGAATCTCTGCTGCTCAGCAACTTGGATGACAGCTT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAATGAGTTTGAGAACGTaGAACGCTGGGAGACATGGG +
Preference number: 5 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPMSLRT*NAGRHG
Trigger: CCCATGTCTCCCAGCGTTCAACGTTCTCAAACTCAT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 90 bp TATAGCTTCCCTGATGCTGTTCACTATGGCAGCTGTTTTGCTCTCTaGAGCCTCTGGGTTTCCAATGAGGTAATCCCAGGCACAGAACAC +
Preference number: 5 (lower is better)
Translates to: YSFPDAVHYGSCFAL*SLWVSNEVIPGTEH
Trigger: GTGTTCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGTGAACAGCATCAGGGAAGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp TGGGTATTGGAAATTCCGGGATCGTGGCTTTCTGGGCACATAGGCTaGCCTCTCAAGGTGACCCTCAAAATCTTCATTCCACGACTTGTA +
Preference number: 5 (lower is better)
Translates to: WVLEIPGSWLSGHIG*PLKVTLKIFIPRLV
Trigger: TACAAGTCGTGGAATGAAGATTTTGAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAAGAAGCACCAGGATGTaGGCAATAATCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKRSTRM*AIILRQ
Trigger: CTGCCTGAGGATTATTGCCAACATCCTGGTGCTTCT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp ATGTCAGGCGACCATCAGGTGATGGTCAGGTGGCTGCTGATTGTCTCTCTAAAAATGAGCCCAATGAGTTaGAGAACGTTGAACGCTGGG +
Preference number: 5 (lower is better)
Translates to: MSGDHQVMVRWLLIVSLKMSPMS*RTLNAG
Trigger: CCCAGCGTTCAACGTTCTCAAACTCATTGGGCTCAT...TTTTAGAGAGACAATCAGCAGCCACCTGACCATCACCTGATGGTCGCCTGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAAGGGGGAAGAGACCGTTaGATCCAATCTCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQGGRDR*IQSLLG
Trigger: GCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCC...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCAAGGCAAGTATTGAGATaGCTGCAGACCCGTGATGAT +
Preference number: 5 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPRQVLR*LQTRDD
Trigger: ATCATCACGGGTCTGCAGCAATCTCAATACTTGCCT...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCAAGGGAAGAAAGGGAAGAATCGTGGGGAGAAGCAACGCAAGACCCCGGAAGCCGAGAGCAAAGGCAGTaGTTCAGTCTTTTACATTTA +
Preference number: 5 (lower is better)
Translates to: PREEREESWGEATQDPGSREQRQ*FSLLHL
Trigger: TAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCG...GCTTCCGGGGTCTTGCGTTGCTTCTCCCCACGATTCTTCCCTTTCTTCCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCAGTTTAGAGATGGCTaGTATCGGACAATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: PSSTQPPGMSGDHQVMVRQFRDG*YRTIAK
Trigger: TTTTGCTATTGTCCGATACAAGCCATCTCTAAACTG...CCTGACCATCACCTGATGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 90 bp GTGGAGGCTAGTCTTGTTGGCCTTTATAAGAGGCATGGTATAAGCTaGAATGCTGGTCTCTTCCAAGGCCCATGTGTTGTTTCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: VEASLVGLYKRHGIS*NAGLFQGPCVVSPE
Trigger: CTCAGGAGAAACAACACATGGGCCTTGGAAGAGACCAGCATTTCAGCTTATACCATGCCTCTTATAAAGGCCAACAAGACTAGCCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp TTCCAGGCCGAGATGTGGACCATTTCTCTTCTTCAGGGGCTGTCCTaGTTGCAAAGAAGGTGGTGGAATCTATCCAATGACTTGTGTTAT +
Preference number: 5 (lower is better)
Translates to: FQAEMWTISLLQGLS*LQRRWWNLSNDLCY
Trigger: ATAACACAAGTCATTGGATAGATTCCACCACCTTCTTTGCAACCAGGACAGCCCCTGAAGAAGAGAAATGGTCCACATCTCGGCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACCTCTGCACCTGCTGCTaGGTAGCCTCGGGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHLCTCC*VASGPG
Trigger: ACCAGGACCCGAGGCTACCAAGCAGCAGGTGCAGAG...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTCCATATTCAGGAAACTaGCTCTCCAGATCCCAACAC +
Preference number: 5 (lower is better)
Translates to: EAGSVLTEARAKAVVQSFPYSGN*LSRSQH
Trigger: GTGTTGGGATCTGGAGAGCAAGTTTCCTGAATATGG...AAAAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS GCA 90 bp TGCCCTCAGCTTCTGTCCCATAGTCCAGGGTCTGCAGCGAATGTTTaGCATGAGATCTTTCTGGAACTGTATATTCTGGAAGATTTGTTC +
Preference number: 5 (lower is better)
Translates to: CPQLLSHSPGSAANV*HEIFLELYILEDLF
Trigger: GAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACATTCGCTGCAGACCCTGGACTATGGGACAGAAGCTGAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 90 bp CCCATAGTCCAGGGTCTGCAGCGAATGTTTGCCATGAGATCTTTCTaGAACTGTATATTCTGGAAGATTTGTTCCGGATCATTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PIVQGLQRMFAMRSF*NCIFWKICSGSLLS
Trigger: GGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACATTCGCTGCAGACCCTGGACTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp TTGTTCACCTCTTTTTCCAGAAAGGGAGATGCCATGTGCTGGCCCAGCACTCCATATATTCTGGAAGATTaGTTCCGGATCATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LFTSFSRKGDAMCWPSTPYILED*FRIIAV
Trigger: GACAGCAATGATCCGGAACAAATCTTCCAGAATATA...TGGAGTGCTGGGCCAGCACATGGCATCTCCCTTTCTGGAAAAAGAGGTGAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCGACGGTGTCCAGGTCTaGGGCAGACGAAACCTGCTC +
Preference number: 5 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFDGVQV*GRRNLL
Trigger: GAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGTC...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAATGAGCCCAATGAGTTaGAGAACGTTGAACGCTGGG +
Preference number: 5 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPMSPMS*RTLNAG
Trigger: CCCAGCGTTCAACGTTCTCAAACTCATTGGGCTCAT...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTTGGGCCACGTTGCCGTaGTTTTGGGGTGTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSWATLP*FWGVPE
Trigger: CTCGGGCACACCCCAAAACAACGGCAACGTGGCCCA...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GCGAGGCAGGAAGCGTACTTACAGAAGCGAGAGCAAAGGCAGTTGTTCAGTCTTCTAACTCGGATAAATTaGGCTAACAGTAGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: ARQEAYLQKREQRQLFSLLTRIN*ANSSCR
Trigger: TCTACAGCTACTGTTAGCCAAATTTATCCGAGTTAG...AAGACTGAACAACTGCCTTTGCTCTCGCTTCTGTAAGTACGCTTCCTGCCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359440.6
CDS GCA 90 bp AGGCCGAGATGTGGACCATTTCTCTTCTTCAGGGGCTGTCCTGGTTaGAAAGAAGGTGGTGGAATCTATCCAATGACTTGTGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: RPRCGPFLFFRGCPG*KEGGGIYPMTCVIF
Trigger: AAAAATAACACAAGTCATTGGATAGATTCCACCACCTTCTTTGCAACCAGGACAGCCCCTGAAGAAGAGAAATGGTCCACATCTCGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCTCCCAGCACTGGTCTaGTGGACTCTGAGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFLPALV*WTLSVE
Trigger: CTCCACACTCAGAGTCCACAAGACCAGTGCTGGGAG...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 90 bp CTGCAGCGAATGTTTGCCATGAGATCTTTCTGGAACTGTATATTCTaGAAGATTTGTTCCGGATCATTGCTGTCCCCTGTTTCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LQRMFAMRSFWNCIF*KICSGSLLSPVSSA
Trigger: TGCTGATGAAACAGGGGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACATTCGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS-3UTR CAA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTTGGAAGCAGCGGAGTTaGCTCTGCCCGCTAGTTCTC +
Preference number: 5 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSWKQRS*LCPLVL
Trigger: GAGAACTAGCGGGCAGAGCAAACTCCGCTGCTTCCA...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACACTATGGCAGCTGTTTaGCTCTCTGCAGCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHTMAAV*LSAASG
Trigger: CCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGT...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACGGGGGAAGAGACCGTTaGATCCAATCTCTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHGGRDR*IQSLLG
Trigger: GCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCC...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GTAAAATTCATGAATTCCTTCTTCAACACAACCCCCAGGAATGTCAGGCGACCAGTCATAAATTTTCTCTaGTCCACTGAATGGCCCACA +
Preference number: 5 (lower is better)
Translates to: VKFMNSFFNTTPRNVRRPVINFL*STEWPT
Trigger: TGTGGGCCATTCAGTGGACAAGAGAAAATTTATGAC...TGGTCGCCTGACATTCCTGGGGGTTGTGTTGAAGAAGGAATTCATGAATTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAATCTTATCCTCTGATCTaGCGTTTTGGATCTGCATTT +
Preference number: 5 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQSYPLI*RFGSAF
Trigger: AAATGCAGATCCAAAACGCAAGATCAGAGGATAAGA...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGAAGGTCACTGGTGCTaGCACACAGACCGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIEGHWC*HTDRAD
Trigger: ATCTGCACGGTCTGTGTGCAAGCACCAGTGACCTTC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp CTCTCTAAAATAATAATTGGTCACAGCTGGCACCAGGGAACGACAGTCTCCCAACGAGAGCAAAGGCAGTaGTTCAGTCTTTTACATTTA +
Preference number: 5 (lower is better)
Translates to: LSKIIIGHSWHQGTTVSQREQRQ*FSLLHL
Trigger: TAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCG...TTGGGAGACTGTCGTTCCCTGGTGCCAGCTGTGACCAATTATTATTTTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTCAGAGAGCTAGGAAGTaGGCAGGCAAAGGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSQRARK*AGKGLF
Trigger: GAACAGACCTTTGCCTGCCAACTTCCTAGCTCTCTG...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCGTGTGGAGGCTAGTCTaGTTGGCCTTTATAAGAGGC +
Preference number: 5 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIVWRLV*LAFIRG
Trigger: GCCTCTTATAAAGGCCAACAAGACTAGCCTCCACAC...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCATTTTGAGCTGGTGGTaGCTGAGCTTTAGAGACCGT +
Preference number: 5 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFILSWW*LSFRDR
Trigger: ACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAAT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATTTTGAGCTGGTGGTaGCTGAGCTTTAGAGACCGT +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHILSWW*LSFRDR
Trigger: ACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAAT...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATTTGTTCCGGATCATaGCTGTCCCCTGTTTCATCA +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHICSGS*LSPVSS
Trigger: TGATGAAACAGGGGACAGCAATGATCCGGAACAAAT...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACCTCATGCTGTTAACTTaGTCCAGGAGAGCAATGATC +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHLMLLT*SRRAMI
Trigger: GATCATTGCTCTCCTGGACAAAGTTAACAGCATGAG...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACATCTGGAGGCTAGTCTTGTaGGCCTTTATAAGAGGCATG +
Preference number: 5 (lower is better)
Translates to: SKGSCSVFYIYLYYMFHIWRLVL*AFIRGM
Trigger: CATGCCTCTTATAAAGGCCAACAAGACTAGCCTCCA...GATGTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCCTGAAGCATCTATCTaGAAATGTCTTTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFPEASI*KCLSGQ
Trigger: CTGGCCAGAAAGACATTTCAAGATAGATGCTTCAGG...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp TCTTTTACATTTATCTATACTACATGTTCCACATCCCTGGGAAACCATGTTTCTCTCATGCTGTTAACTTaGTCCAGGAGAGCAATGATC +
Preference number: 5 (lower is better)
Translates to: SFTFIYTTCSTSLGNHVSLMLLT*SRRAMI
Trigger: GATCATTGCTCTCCTGGACAAAGTTAACAGCATGAG...AGAAACATGGTTTCCCAGGGATGTGGAACATGTAGTATAGATAAATGTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp AGCGAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCAGAAGTTGTTGGATCTaGAGGCTCGAAATACTTGCT +
Preference number: 5 (lower is better)
Translates to: SESKGSCSVFYIYLYYMFRSCWI*RLEILA
Trigger: AGCAAGTATTTCGAGCCTCAAGATCCAACAACTTCT...GAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS-3UTR CAA 90 bp GAGAGCAAAGGCAGTTGTTCAGTCTTTTACATTTATCTATACTACATGTTCCACCAGTTTAGAGATGGCTaGTATCGGACAATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: ESKGSCSVFYIYLYYMFHQFRDG*YRTIAK
Trigger: TTTTGCTATTGTCCGATACAAGCCATCTCTAAACTG...GTGGAACATGTAGTATAGATAAATGTAAAAGACTGAACAACTGCCTTTGCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp CTGCTGGGCTGGCCCACGGACCTCGGGAACCTGCCCTaGCTGTGGGTGACCTGCAGGTACTGGTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: LLGWPTDLGNLP*LWVTCRYWSAL
Trigger: CAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCCAGCCCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GGCTGGCCCACGGACCTCGGGAACCTGCCCTGGCTGTaGGTGACCTGCAGGTACTGGTCAGCGCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: GWPTDLGNLPWL*VTCRYWSALLF
Trigger: GAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp GGCCCACGGACCTCGGGAACCTGCCCTGGCTGTGGGTaGCCTGCAGGTACTGGTCAGCGCTGCTGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GPRTSGTCPGCG*PAGTGQRCCSA
Trigger: AGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGTGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp ACGGACCTCGGGAACCTGCCCTGGCTGTGGGTGACCTaGAGGTACTGGTCAGCGCTGCTGTTCTGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: TDLGNLPWLWVT*RYWSALLFCWS
Trigger: TGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 90 bp GAACAAATCAAGTCATCCAGATCCACGGTCAGCTCCTGCCCCGACTaGGCCTTCCTCCTGCTGGGCTGGCCCACGGACCTCGGGAACCTG +
Preference number: 6 (lower is better)
Translates to: EQIKSSRSTVSSCPD*AFLLLGWPTDLGNL
Trigger: CAGGTTCCCGAGGTCCGTGGGCCAGCCCAGCAGGAGGAAGGCCAAGTCGGGGCAGGAGCTGACCGTGGATCTGGATGACTTGATTTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp TCCTCCTCTTCTTCACTCAGCTGTGGGGAGGGAGGCTaGCGGGGGACCCGGGATGCATATTGTCGCACGTTC +
Preference number: 6 (lower is better)
Translates to: SSSSSLSCGEGG*RGTRDAYCRTF
Trigger: GAACGTGCGACAATATGCATCCCGGGTCCCCCGCCAGCCTCCCTCCCCACAGCTGAGTGAAGAAGAGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GGGAACCTGCCCTGGCTGTGGGTGACCTGCAGGTACTaGTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: GNLPWLWVTCRY*SALLFCWSLLD
Trigger: ATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp GATGCCATGTGCTGGCCCAGCACTCCAACAGGGGCCTaGCCTCTAGGAACGGGACACTGGAGGAAGCCTAGA +
Preference number: 6 (lower is better)
Translates to: DAMCWPSTPTGA*PLGTGHWRKPR
Trigger: TCTAGGCTTCCTCCAGTGTCCCGTTCCTAGAGGTCAGGCCCCTGTTGGAGTGCTGGGCCAGCACATGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp GTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGATGCTaGCGACACGGAGTCAGATTCCGTGAGGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: VSAAVLLVTAGC*RHGVRFREGWL
Trigger: GAGCCATCCCTCACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp CTGGTCAGCGCTGCTGTTCTGCTGGTCACTGCTGGATaGTGCCGACACGGAGTCAGATTCCGTGAGGGATGG +
Preference number: 6 (lower is better)
Translates to: LVSAAVLLVTAG*CRHGVRFREGW
Trigger: CCATCCCTCACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp TGGGTGACCTGCAGGTACTGGTCAGCGCTGCTGTTCTaGTGGTCACTGCTGGATGCTGCCGACACGGAGTCA +
Preference number: 6 (lower is better)
Translates to: WVTCRYWSALLF*WSLLDAADTES
Trigger: TGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp CTCCCTGAGTCAAAATGGGCCACGTTGCCGTTGTTTTaGGGTGTGCCCGAGTGCGCTGAGGACAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: LPESKWATLPLF*GVPECAEDSWL
Trigger: CAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCAAAACAACGGCAACGTGGCCCATTTTGACTCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 90 bp AGAGACCAGACGGTGTCCAGGTCTTGGGCAGACGAAACCTGCTCCTaGGGGATGGTCTTCCTGGCTGTGCTTCCAAAGGGCTGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: RDQTVSRSWADETCS*GMVFLAVLPKGWPA
Trigger: TGCAGGCCAGCCCTTTGGAAGCACAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGTCTGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp CTCGAACCTGGGCTTCCCTCTGGGCTTCAGAGGGGGCTGTGGGTATaGGAAATTCCGGGATCGTGGCTTTCTGGGCACATAGGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: LEPGLPSGLQRGLWV*EIPGSWLSGHIGWP
Trigger: AGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTGAAGCCCAGAGGGAAGCCCAGGTTCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp GACCAGACGGTGTCCAGGTCTTGGGCAGACGAAACCTaGTCCTTGGGGATGGTCTTCCTGGCTGTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: DQTVSRSWADET*SLGMVFLAVLP
Trigger: TGGAAGCACAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGTCTGCCCAAGACCTGGACACCGTCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp GAACCTGGGCTTCCCTCTGGGCTTCAGAGGGGGCTGTaGGTATTGGAAATTCCGGGATCGTGGCTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: EPGLPSGLQRGL*VLEIPGSWLSG
Trigger: CCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTGAAGCCCAGAGGGAAGCCCAGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GTGACCTGCAGGTACTGGTCAGCGCTGCTGTTCTGCTaGTCACTGCTGGATGCTGCCGACACGGAGTCAGAT +
Preference number: 6 (lower is better)
Translates to: VTCRYWSALLFC*SLLDAADTESD
Trigger: ATCTGACTCCGTGTCGGCAGCATCCAGCAGTGACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 90 bp GGAGCCCGACGGAGGTCTATCAGGGAGCGTGGGGGAAGAGACCGTTaGATCCAATCTCTGCTTGGCGTCTCCTCCTCTTCTTCACTCAGC +
Preference number: 6 (lower is better)
Translates to: GARRRSIRERGGRDR*IQSLLGVSSSSSLS
Trigger: GCTGAGTGAAGAAGAGGAGGAGACGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGACCTCCGTCGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp CACGTTGCCGTTGTTTTGGGGTGTGCCCGAGTGCGCTaGGGACAGCTGGCTGGTAAGATCACTGTCGTTTGG +
Preference number: 6 (lower is better)
Translates to: HVAVVLGCARVR*GQLAGKITVVW
Trigger: CCAAACGACAGTGATCTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCAAAACAACGGCAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp GGCTCTGGGGCATGGACTGTGCGACTGTCTCTATCCTaGCACTCTTGCTGCTCCCTGAGTCAAAATGGGCCA +
Preference number: 6 (lower is better)
Translates to: GSGAWTVRLSLS*HSCCSLSQNGP
Trigger: TGGCCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCGCACAGTCCATGCCCCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GGCGGGGGACCCGGGATGCATATTGTCGCACGTTCCTaGGGTACAGCTCCACAATGTCACCTGAAGCATCTA +
Preference number: 6 (lower is better)
Translates to: GGGPGMHIVARS*GTAPQCHLKHL
Trigger: TAGATGCTTCAGGTGACATTGTGGAGCTGTACCCCAGGAACGTGCGACAATATGCATCCCGGGTCCCCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp CAGAGGGGGCTGTGGGTATTGGAAATTCCGGGATCGTaGCTTTCTGGGCACATAGGCTGGCCTCTCAAGGTG +
Preference number: 6 (lower is better)
Translates to: QRGLWVLEIPGS*LSGHIGWPLKV
Trigger: CACCTTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 72 bp ACGAGCAAATTTCCGCCAGAGCTCTGCACCTGCTGCTaGGTAGCCTCGGGTCCTGGTCAGCCTCCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: TSKFPPELCTCC*VASGPGQPPFK
Trigger: TTTGAAGGGAGGCTGACCAGGACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTCTGGCGGAAATTTGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp CAGGTCAGCACAGCCCAGCTTCTCAGGTACATGAGCCCAATGAGTTaGAGAACGTTGAACGCTGGGAGACATGGGGAGAAGAAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: QVSTAQLLRYMSPMS*RTLNAGRHGEKKAP
Trigger: GGGGGCCTTCTTCTCCCCATGTCTCCCAGCGTTCAACGTTCTCAAACTCATTGGGCTCATGTACCTGAGAAGCTGGGCTGTGCTGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS GCA 72 bp ACGAAACCTGCTCCTTGGGGATGGTCTTCCTGGCTGTaGTTCCAAAGGGCTGGCCTGCAATCAGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: TKPAPWGWSSWL*FQRAGLQSALE
Trigger: TTCCAGAGCTGATTGCAGGCCAGCCCTTTGGAAGCACAGCCAGGAAGACCATCCCCAAGGAGCAGGTTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS GCA 72 bp GCAGCCGGTAGCCAGCTCTCCCGATCTTCCTCTCCCTaGCGTAATATCCGTAGAAGAGGACAGAGTACTGGA +
Preference number: 6 (lower is better)
Translates to: AAGSQLSRSSSP*RNIRRRGQSTG
Trigger: TCCAGTACTCTGTCCTCTTCTACGGATATTACGGCAGGGAGAGGAAGATCGGGAGAGCTGGCTACCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS GCA 72 bp GCATGGACTGTGCGACTGTCTCTATCCTGCCACTCTTaGTGCTCCCTGAGTCAAAATGGGCCACGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: AWTVRLSLSCHS*CSLSQNGPRCR
Trigger: ACGGCAACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCGCACAGTCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 72 bp CGGAGGTCTATCAGGGAGCGTGGGGGAAGAGACCGTTaGATCCAATCTCTGCTTGGCGTCTCCTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: RRSIRERGGRDR*IQSLLGVSSSS
Trigger: AGAAGAGGAGGAGACGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGACCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp CAGCTGTTTTGCTCTCTGCAGCCTCTGGGTTTCCAATaGGGTAATCCCAGGCACAGAACACCCGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: QLFCSLQPLGFQ*GNPRHRTPASR
Trigger: TCTGCTGGCGGGTGTTCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS TCA 72 bp TGCGACTGTCTCTATCCTGCCACTCTTGCTGCTCCCTaGGTCAAAATGGGCCACGTTGCCGTTGTTTTGGGG +
Preference number: 6 (lower is better)
Translates to: CDCLYPATLAAP*VKMGHVAVVLG
Trigger: CCCCAAAACAACGGCAACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp GGAGGTCTATCAGGGAGCGTGGGGGAAGAGACCGTTTaGTCCAATCTCTGCTTGGCGTCTCCTCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: GGLSGSVGEETV*SNLCLASPPLL
Trigger: AAGAAGAGGAGGAGACGCCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp TGGACTGTGCGACTGTCTCTATCCTGCCACTCTTGCTaGTCCCTGAGTCAAAATGGGCCACGTTGCCGTTGT +
Preference number: 6 (lower is better)
Translates to: WTVRLSLSCHSC*SLSQNGPRCRC
Trigger: ACAACGGCAACGTGGCCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCGCACAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp AGAGCTCTGCACCTGCTGCTTGGTAGCCTCGGGTCCTaGTCAGCCTCCCTTCAAACTTCAGCACAATGTTCT +
Preference number: 6 (lower is better)
Translates to: RALHLLLGSLGS*SASLQTSAQCS
Trigger: AGAACATTGTGCTGAAGTTTGAAGGGAGGCTGACCAGGACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp AAAATGAGGAGCCCGACGGAGGTCTATCAGGGAGCGTaGGGGAAGAGACCGTTTGATCCAATCTCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: KMRSPTEVYQGA*GKRPFDPISAW
Trigger: CCAAGCAGAGATTGGATCAAACGGTCTCTTCCCCCACGCTCCCTGATAGACCTCCGTCGGGCTCCTCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GCTGTGGGTATTGGAAATTCCGGGATCGTGGCTTTCTaGGCACATAGGCTGGCCTCTCAAGGTGACCCTCAA +
Preference number: 6 (lower is better)
Translates to: AVGIGNSGIVAF*AHRLASQGDPQ
Trigger: TTGAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp AGGAAGTTGGCAGGCAAAGGTCTGTTCCGAGGTTTCTaGATGGAAGCAGCGGAGTTTGCTCTGCCCGCTAGT +
Preference number: 6 (lower is better)
Translates to: RKLAGKGLFRGF*MEAAEFALPAS
Trigger: ACTAGCGGGCAGAGCAAACTCCGCTGCTTCCATTCAGAAACCTCGGAACAGACCTTTGCCTGCCAACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp TGCTGGTCTCTTCCAAGGCCCATGTGTTGTTTCTCCTaGGCCCCATTCCAGGCCGAGATGTGGACCATTTCT +
Preference number: 6 (lower is better)
Translates to: CWSLPRPMCCFS*APFQAEMWTIS
Trigger: AGAAATGGTCCACATCTCGGCCTGGAATGGGGCTCAGGAGAAACAACACATGGGCCTTGGAAGAGACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp AGTTGGCAGGCAAAGGTCTGTTCCGAGGTTTCTGAATaGAAGCAGCGGAGTTTGCTCTGCCCGCTAGTTCTC +
Preference number: 6 (lower is better)
Translates to: SWQAKVCSEVSE*KQRSLLCPLVL
Trigger: GAGAACTAGCGGGCAGAGCAAACTCCGCTGCTTCCATTCAGAAACCTCGGAACAGACCTTTGCCTGCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp CTCCTGACCAACGTATGTCTCCCAGCACTGGTCTTGTaGACTCTGAGTGTGGAGGCTAGTCTTGTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LLTNVCLPALVL*TLSVEASLVGL
Trigger: AAGGCCAACAAGACTAGCCTCCACACTCAGAGTCCACAAGACCAGTGCTGGGAGACATACGTTGGTCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp TTGTTTTGGGGTGTGCCCGAGTGCGCTGAGGACAGCTaGCTGGTAAGATCACTGTCGTTTGGAAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: LFWGVPECAEDS*LVRSLSFGSFL
Trigger: CAAGAAGCTTCCAAACGACAGTGATCTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCAAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 72 bp GATCTTGAGGCTCGAAATACTTGCTGGTGGGGCACATaGCAGGTCAGCACAGCCCAGCTTCTCAGGTACATG +
Preference number: 6 (lower is better)
Translates to: DLEARNTCWWGT*QVSTAQLLRYM
Trigger: CATGTACCTGAGAAGCTGGGCTGTGCTGACCTGCAATGTGCCCCACCAGCAAGTATTTCGAGCCTCAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp ACAGCCCAGCTTCTCAGGTACATGAGCCCAATGAGTTTGAGAACGTaGAACGCTGGGAGACATGGGGAGAAGAAGGCCCCCATCCAAATC +
Preference number: 6 (lower is better)
Translates to: TAQLLRYMSPMSLRT*NAGRHGEKKAPIQI
Trigger: GATTTGGATGGGGGCCTTCTTCTCCCCATGTCTCCCAGCGTTCAACGTTCTCAAACTCATTGGGCTCATGTACCTGAGAAGCTGGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp GCTGAGGACAGCTGGCTGGTAAGATCACTGTCGTTTGGAAGCTTCTaGGTGCTTTCTTCCTGGGTCTGGATTCGGGCTTCTACCATCTGG +
Preference number: 6 (lower is better)
Translates to: AEDSWLVRSLSFGSF*VLSSWVWIRASTIW
Trigger: CCAGATGGTAGAAGCCCGAATCCAGACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACGACAGTGATCTTACCAGCCAGCTGTCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp CCTGATGCTGTTCACTATGGCAGCTGTTTTGCTCTCTaGAGCCTCTGGGTTTCCAATGAGGTAATCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PDAVHYGSCFAL*SLWVSNEVIPG
Trigger: GCCTGGGATTACCTCATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGTGAACAGCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp TCACTGTCGTTTGGAAGCTTCTTGGTGCTTTCTTCCTaGGTCTGGATTCGGGCTTCTACCATCTGGGCAACC +
Preference number: 6 (lower is better)
Translates to: SLSFGSFLVLSS*VWIRASTIWAT
Trigger: GGTTGCCCAGATGGTAGAAGCCCGAATCCAGACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACGACAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp GCAAAGTCGAGGCCTGTGGTCCACGGTGAGGAGGGTTaGTTTGCTGAAAGTCTTTTCGGAAAAGAGGTTCTG +
Preference number: 6 (lower is better)
Translates to: AKSRPVVHGEEG*FAESLFGKEVL
Trigger: CAGAACCTCTTTTCCGAAAAGACTTTCAGCAAATCAACCCTCCTCACCGTGGACCACAGGCCTCGACTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp TGCACCATAGTGGGTGGCCAAGAGTCACAGAAACCTTaGAGATGTGACTTCACTTGTATTCCCACGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CTIVGGQESQKP*RCDFTCIPTLA
Trigger: CGCCAGCGTGGGAATACAAGTGAAGTCACATCTTCAAGGTTTCTGTGACTCTTGGCCACCCACTATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS GCA 72 bp TGTGCGCGATCTGTTCCTGTGAAGGTCACTGGTGCTTaGACACAGACCGTGCAGATACCTGTTAGTTTCATG +
Preference number: 6 (lower is better)
Translates to: CARSVPVKVTGA*TQTVQIPVSFM
Trigger: CATGAAACTAACAGGTATCTGCACGGTCTGTGTGCAAGCACCAGTGACCTTCACAGGAACAGATCGCGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GTTCACTATGGCAGCTGTTTTGCTCTCTGCAGCCTCTaGGTTTCCAATGAGGTAATCCCAGGCACAGAACAC +
Preference number: 6 (lower is better)
Translates to: VHYGSCFALCSL*VSNEVIPGTEH
Trigger: GTGTTCTGTGCCTGGGATTACCTCATTGGAAACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp GAAATTCCGGGATCGTGGCTTTCTGGGCACATAGGCTaGCCTCTCAAGGTGACCCTCAAAATCTTCATTCCA +
Preference number: 6 (lower is better)
Translates to: EIPGSWLSGHIG*PLKVTLKIFIP
Trigger: TGGAATGAAGATTTTGAGGGTCACCTTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GGGGAGCCATCCCTGGGTATTCTTAGAAATAACTCTTaGACATCTGGGGATTGGTGGCCTTGCACCATAGTG +
Preference number: 6 (lower is better)
Translates to: GEPSLGILRNNS*TSGDWWPCTIV
Trigger: CACTATGGTGCAAGGCCACCAATCCCCAGATGTCCAAGAGTTATTTCTAAGAATACCCAGGGATGGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CAA 72 bp AGCTGGCTGGTAAGATCACTGTCGTTTGGAAGCTTCTaGGTGCTTTCTTCCTGGGTCTGGATTCGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SWLVRSLSFGSF*VLSSWVWIRAS
Trigger: AGAAGCCCGAATCCAGACCCAGGAAGAAAGCACCAAGAAGCTTCCAAACGACAGTGATCTTACCAGCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS TCA 72 bp CCAACGTATGTCTCCCAGCACTGGTCTTGTGGACTCTaGGTGTGGAGGCTAGTCTTGTTGGCCTTTATAAGA +
Preference number: 6 (lower is better)
Translates to: PTYVSQHWSCGL*VWRLVLLAFIR
Trigger: TCTTATAAAGGCCAACAAGACTAGCCTCCACACTCAGAGTCCACAAGACCAGTGCTGGGAGACATACGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS TCA 72 bp TCGCACGTTCCTGGGGTACAGCTCCACAATGTCACCTaGAGCATCTATCTTGAAATGTCTTTCTGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: SHVPGVQLHNVT*SIYLEMSFWPD
Trigger: GTCTGGCCAGAAAGACATTTCAAGATAGATGCTTCAGGTGACATTGTGGAGCTGTACCCCAGGAACGTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS GCA 72 bp AGAAATAACTCTTGGACATCTGGGGATTGGTGGCCTTaGACCATAGTGGGTGGCCAAGAGTCACAGAAACCT +
Preference number: 6 (lower is better)
Translates to: RNNSWTSGDWWP*TIVGGQESQKP
Trigger: AGGTTTCTGTGACTCTTGGCCACCCACTATGGTGCAAGGCCACCAATCCCCAGATGTCCAAGAGTTATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CCA 72 bp TCTGATCTTGCGTTTTGGATCTGCATTTTGAGCTGGTaGTTGCTGAGCTTTAGAGACCGTGCGATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: SDLAFWICILSW*LLSFRDRAMLW
Trigger: CCAGAGCATCGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp TCCTCTGATCTTGCGTTTTGGATCTGCATTTTGAGCTaGTGGTTGCTGAGCTTTAGAGACCGTGCGATGCTC +
Preference number: 6 (lower is better)
Translates to: SSDLAFWICILS*WLLSFRDRAML
Trigger: GAGCATCGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGATCAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp GAAATACTTGCGTTTTGGATCTGCATTTTGAGCTGGTaGTTGCTGAGCTTTAGAGACCGTGCGATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: EILAFWICILSW*LLSFRDRAMLW
Trigger: CCAGAGCATCGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGTATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CAA 90 bp CAGGCCGAGATGTGGACCATTTCTCTTCTTCAGGGGCTGTCCTGGTaGCAAAGAAGGTGGTGGAATCTATCCAATGACTTGTGTTATTTT +
Preference number: 6 (lower is better)
Translates to: QAEMWTISLLQGLSW*QRRWWNLSNDLCYF
Trigger: AAAATAACACAAGTCATTGGATAGATTCCACCACCTTCTTTGCAACCAGGACAGCCCCTGAAGAAGAGAAATGGTCCACATCTCGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp CATGAAATACTTGCGTTTTGGATCTGCATTTTGAGCTaGTGGTTGCTGAGCTTTAGAGACCGTGCGATGCTC +
Preference number: 6 (lower is better)
Translates to: HEILAFWICILS*WLLSFRDRAML
Trigger: GAGCATCGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGTATTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CAA 72 bp TTCTTATCCTCTGATCTTGCGTTTTGGATCTGCATTTaGAGCTGGTGGTTGCTGAGCTTTAGAGACCGTGCG +
Preference number: 6 (lower is better)
Translates to: FLSSDLAFWICI*SWWLLSFRDRA
Trigger: CGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGATCAGAGGATAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp AACCTTGAAGATGTGACTTCACTTGTATTCCCACGCTaGCGGGATCTCAGTCATGTGGTTGACACATATTCA +
Preference number: 6 (lower is better)
Translates to: NLEDVTSLVFPR*RDLSHVVDTYS
Trigger: TGAATATGTGTCAACCACATGACTGAGATCCCGCCAGCGTGGGAATACAAGTGAAGTCACATCTTCAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CAA 72 bp TCTTGTCCACTGAATGGCCCACAGTTTAGAGATGGCTaGTATCGGACAATAGCAAAAATGGTTGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: SCPLNGPQFRDG*YRTIAKMVGSM
Trigger: CATGCTGCCAACCATTTTTGCTATTGTCCGATACAAGCCATCTCTAAACTGTGGGCCATTCAGTGGACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp CATAATAGCAAAGTTCATGAAATACTTGCGTTTTGGATCTGCATTTaGAGCTGGTGGTTGCTGAGCTTTAGAGACCGTGCGATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: HNSKVHEILAFWICI*SWWLLSFRDRAMLW
Trigger: CCAGAGCATCGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGTATTTCATGAACTTTGCTATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS TCA 72 bp AGTCTTGTTGGCCTTTATAAGAGGCATGGTATAAGCTaGAATGCTGGTCTCTTCCAAGGCCCATGTGTTGTT +
Preference number: 6 (lower is better)
Translates to: SLVGLYKRHGIS*NAGLFQGPCVV
Trigger: AACAACACATGGGCCTTGGAAGAGACCAGCATTTCAGCTTATACCATGCCTCTTATAAAGGCCAACAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS GCA 72 bp TTTCGGAAAAGAGGTTCTGAGTGTACATCTTCGATGTaGGTTGTAAATGTCATAGGTGTGCGCGATCTGTTC +
Preference number: 6 (lower is better)
Translates to: FRKRGSECTSSM*VVNVIGVRDLF
Trigger: GAACAGATCGCGCACACCTATGACATTTACAACGCACATCGAAGATGTACACTCAGAACCTCTTTTCCGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CAA 72 bp AAAGTTCATGAAATACTTGCGTTTTGGATCTGCATTTaGAGCTGGTGGTTGCTGAGCTTTAGAGACCGTGCG +
Preference number: 6 (lower is better)
Translates to: KVHEILAFWICI*SWWLLSFRDRA
Trigger: CGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGTATTTCATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CCA 72 bp CACTTGTATTCCCACGCTGGCGGGATCTCAGTCATGTaGTTGACACATATTCATAATAGCAAAGTTCATGAA +
Preference number: 6 (lower is better)
Translates to: HLYSHAGGISVM*LTHIHNSKVHE
Trigger: TTCATGAACTTTGCTATTATGAATATGTGTCAACCACATGACTGAGATCCCGCCAGCGTGGGAATACAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559982.1
CDS CAA 72 bp TGGAACTGTATATTCTGGAAGATTTGTTCCGGATCATaGCTGTCCCCTGTTTCATCAGCACTAAAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: WNCIFWKICSGS*LSPVSSALKLS
Trigger: TGACAGCTTTAGTGCTGATGAAACAGGGGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 72 bp CATGAGATCTTTCTGGAACTGTATATTCTGGAAGATTaGTTCCGGATCATTGCTGTCCCCTGTTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: HEIFLELYILED*FRIIAVPCFIS
Trigger: GCTGATGAAACAGGGGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp AGATCTTTCTGGAACTGTATATTCTGGAAGATTTGTTCCGGATCATaGCTGTCCCCTGTTTCATCAGCACTAAAGCTGTCATCCAAGTTG +
Preference number: 6 (lower is better)
Translates to: RSFWNCIFWKICSGS*LSPVSSALKLSSKL
Trigger: CAACTTGGATGACAGCTTTAGTGCTGATGAAACAGGGGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CCA 72 bp ATGTTTGCCATGAGATCTTTCTGGAACTGTATATTCTaGAAGATTTGTTCCGGATCATTGCTGTCCCCTGTT +
Preference number: 6 (lower is better)
Translates to: MFAMRSFWNCIF*KICSGSLLSPV
Trigger: AACAGGGGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS CAA 90 bp AATGTTTGCCATGAGATCTTTCTGGAACTGTATATTCTGGAAGATTaGTTCCGGATCATTGCTGTCCCCTGTTTCATCAGCACTAAAGCT +
Preference number: 6 (lower is better)
Translates to: NVCHEIFLELYILED*FRIIAVPCFISTKA
Trigger: AGCTTTAGTGCTGATGAAACAGGGGACAGCAATGATCCGGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359440.6
ENST00000558726.5
ENST00000559982.1
CDS TCA 72 bp GGTACAGCTCCACAATGTCACCTGAAGCATCTATCTTaGAATGTCTTTCTGGCCAGACATTTAGATGTTTTT +
Preference number: 6 (lower is better)
Translates to: GTAPQCHLKHLS*NVFLARHLDVF
Trigger: AAAAACATCTAAATGTCTGGCCAGAAAGACATTTCAAGATAGATGCTTCAGGTGACATTGTGGAGCTGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359440.6
ENST00000558726.5
CDS CCA 72 bp ATTCATAATAGCAAAGTTCATGAAATACTTGCGTTTTaGATCTGCATTTTGAGCTGGTGGTTGCTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: IHNSKVHEILAF*ICILSWWLLSF
Trigger: AAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGTATTTCATGAACTTTGCTATTATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559982.1