Pregenerated sensors for TMA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000232112

Ensembl transcript IDs: ENST00000479126.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CCCTTACTGCCGCTGCAAATCCTAGACTGGCTAGAGACCATTCGCTaGAGCGGACGTCGGAAAACGAGACCTCGCAGTTCAGGAGGCAGG	+
Preference number: 5 (lower is better) Translates to: PLLPLQILDWLETIR*SGRRKTRPRSSGGR Trigger: CCTGCCTCCTGAACTGCGAGGTCTCGTTTTCCGACGTCCGCTGCAGCGAATGGTCTCTAGCCAGTCTAGGATTTGCAGCGGCAGTAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479126.1
CDS CCA 90 bp	CTCGTTTCCAGCTCCCGGCCCTTACTGCCGCTGCAAATCCTAGACTaGCTAGAGACCATTCGCTGCAGCGGACGTCGGAAAACGAGACCT	+
Preference number: 5 (lower is better) Translates to: LVSSSRPLLPLQILD*LETIRCSGRRKTRP Trigger: AGGTCTCGTTTTCCGACGTCCGCTGCAGCGAATGGTCTCTAGCCAGTCTAGGATTTGCAGCGGCAGTAAGGGCCGGGAGCTGGAAACGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479126.1
CDS CCA 90 bp	AAGTCAAGTAAGGTTCAAACACTAGAAGGCAGTGAAATACGAATTTaGGGCAAAAGATTGCGGACGACGTCAGACTTTGAGAAACTTAAC	+
Preference number: 5 (lower is better) Translates to: KSSKVQTLEGSEIRI*GKRLRTTSDFEKLN Trigger: GTTAAGTTTCTCAAAGTCTGACGTCGTCCGCAATCTTTTGCCCCAAATTCGTATTTCACTGCCTTCTAGTGTTTGAACCTTACTTGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479126.1
CDS TCA 72 bp	CTCATCCCAATAGGTGCTCATAGCGTTTGGCCAGCTTaGGCTCCATTCGGCCCCCACTTACCCAAGGGCCCC	+
Preference number: 6 (lower is better) Translates to: LIPIGAHSVWPA*APFGPHLPKGP Trigger: GGGGCCCTTGGGTAAGTGGGGGCCGAATGGAGCTCAAGCTGGCCAAACGCTATGAGCACCTATTGGGATGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479126.1
CDS CCA 72 bp	AGCTCCCGGCCCTTACTGCCGCTGCAAATCCTAGACTaGCTAGAGACCATTCGCTGCAGCGGACGTCGGAAA	+
Preference number: 6 (lower is better) Translates to: SSRPLLPLQILD*LETIRCSGRRK Trigger: TTTCCGACGTCCGCTGCAGCGAATGGTCTCTAGCCAGTCTAGGATTTGCAGCGGCAGTAAGGGCCGGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479126.1
CDS GCA 72 bp	CCGCTGCAAATCCTAGACTGGCTAGAGACCATTCGCTaGAGCGGACGTCGGAAAACGAGACCTCGCAGTTCA	+
Preference number: 6 (lower is better) Translates to: PLQILDWLETIR*SGRRKTRPRSS Trigger: TGAACTGCGAGGTCTCGTTTTCCGACGTCCGCTGCAGCGAATGGTCTCTAGCCAGTCTAGGATTTGCAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479126.1
CDS CCA 72 bp	AAGGTTCAAACACTAGAAGGCAGTGAAATACGAATTTaGGGCAAAAGATTGCGGACGACGTCAGACTTTGAG	+
Preference number: 6 (lower is better) Translates to: KVQTLEGSEIRI*GKRLRTTSDFE Trigger: CTCAAAGTCTGACGTCGTCCGCAATCTTTTGCCCCAAATTCGTATTTCACTGCCTTCTAGTGTTTGAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479126.1

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