RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TM9SF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101337

Ensembl transcript IDs: ENST00000217315.9, ENST00000398022.7, ENST00000417389.1, ENST00000442842.5, ENST00000450829.5, ENST00000479591.1, ENST00000495749.1

Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTaGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCT +
Preference number: 1 (lower is better)
Translates to: DPLGHESALLHCQGH*LVGLAAQNFTLLLA
Trigger: AGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR TCA 90 bp ACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTaGAGTTGGGCAGGGCCCACTGCTAGCACACCTTGGAGAGCGGTA +
Preference number: 1 (lower is better)
Translates to: TYRRGSVISGPPCSA*SWAGPTASTPWRAV
Trigger: TACCGCTCTCCAAGGTGTGCTAGCAGTGGGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR GCA 90 bp CTGCAAGTCTCTTCTCTTCTTCCTTGTGGTCCAGCAAACTCCGGCTaGTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAACCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: LQVSSLLPCGPANSG*SEQGQFLLSGEPGP
Trigger: GGGGCCAGGTTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACAAGGAAGAAGAGAAGAGACTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR GCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATaGTTGGCTTGGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGG +
Preference number: 1 (lower is better)
Translates to: TLAALAIPSQTQTSG*LAWEILGPRSRVSW
Trigger: CCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp AAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTaGATGCTTGGCTTGGGAAATACTTGGCCCCAGGTCCAGGGTTTC +
Preference number: 1 (lower is better)
Translates to: KDPSGLGHPFPDTDK*MLGLGNTWPQVQGF
Trigger: GAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp TTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTaGGGCAGTGAGGGGAGGGACATCTTCCTAGCATCACCAGCATCC +
Preference number: 1 (lower is better)
Translates to: FTGLMGEAGRATGRM*GSEGRDIFLASPAS
Trigger: GGATGCTGGTGATGCTAGGAAGATGTCCCTCCCCTCACTGCCCCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR TCA 90 bp TGGCGCTGCAGTCACTGTGAGGCAAGATTGAGAAATTCACTGGTTTaGTGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: WRCSHCEARLRNSLV*WVRLVEPLGECGAV
Trigger: CACTGCCCCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTCAATCTTGCCTCACAGTGACTGCAGCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp GCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTTaGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAAC +
Preference number: 1 (lower is better)
Translates to: ALAIPSQTQTSGCLA*EILGPRSRVSWHKN
Trigger: GTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp ACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTaGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACC +
Preference number: 1 (lower is better)
Translates to: TSRLCSTVRVTGLLD*LHRTSHFFSLFMRT
Trigger: GGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR TCA 90 bp ACTCCAATATCGCTCTCTACTGCTTGGGTTCCCTTTTCTCCAACTTaGTGCTTGGTGGATGCCGCTTGGCGCTGCAGTCACTGTGAGGCA +
Preference number: 1 (lower is better)
Translates to: TPISLSTAWVPFSPT*CLVDAAWRCSHCEA
Trigger: TGCCTCACAGTGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACCCAAGCAGTAGAGAGCGATATTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR GCA 90 bp TCTTGTGTTGGGAGTCCCACAAGGGCTGGTGCAAGGGTTAGCAGCTaGTACTTGAACCCTAATCCCTGGGTGGATGTGGTCTCTTGTAAC +
Preference number: 1 (lower is better)
Translates to: SCVGSPTRAGARVSS*YLNPNPWVDVVSCN
Trigger: GTTACAAGAGACCACATCCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGCACCAGCCCTTGTGGGACTCCCAACACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp TGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCTaGAAAGGGGTGTTGACAATCCGGTCCCCTCTCAGCACCTCTCCT +
Preference number: 1 (lower is better)
Translates to: WLHRTSHFFSLFMRT*KGVLTIRSPLSTSP
Trigger: AGGAGAGGTGCTGAGAGGGGACCGGATTGTCAACACCCCTTTCCAGGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442842.5
3UTR TCA 90 bp TCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCACTGTaGGGCAAGATTGAGAAATTCACTGGTTTGATGGGTGAGGCTGGT +
Preference number: 1 (lower is better)
Translates to: SNLMLGGCRLALQSL*GKIEKFTGLMGEAG
Trigger: ACCAGCCTCACCCATCAAACCAGTGAATTTCTCAATCTTGCCTCACAGTGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR TCA 90 bp AGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGTGGAGACAGTaGCCAAAACCCTTATCTCGGTGGATTTATCCATCCTGGATCCAT +
Preference number: 1 (lower is better)
Translates to: SHRVANSPEELRWRQ*PKPLSRWIYPSWIH
Trigger: ATGGATCCAGGATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp GGATGCTTGGCTTGGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTaGCACAAAAACAGTTCACTGCAAGTCTCTTCTCTTCTTCCTTGT +
Preference number: 1 (lower is better)
Translates to: GCLAWEILGPRSRVS*HKNSSLQVSSLLPC
Trigger: ACAAGGAAGAAGAGAAGAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCAAGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 90 bp AGGGCTGGTGCAAGGGTTAGCAGCTGCTACTTGAACCCTAATCCCTaGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGAT +
Preference number: 1 (lower is better)
Translates to: RAGARVSSCYLNPNP*VDVVSCNLRANVCD
Trigger: ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGCACCAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAGAGGCTGGCTGGCACTaGGGGTGCTGTCCGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGEAGWH*GCCPSW
Trigger: CCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTC...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCCCTGGCTGGAAACCCTaGCTTGGGCAGCCCTGGAGG +
Preference number: 2 (lower is better)
Translates to: EGICNLWASLFCLKLGRAPGWKP*LGQPWR
Trigger: CCTCCAGGGCTGCCCAAGGCAGGGTTTCCAGCCAGG...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGTCCCCCACGCAGGGTaGCTTCCTGTCCGAGGACGG +
Preference number: 2 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGVPHAG*LPVRGR
Trigger: CCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGAC...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGGGTGCTGTCCGAGCTaGAGCTGTGCTTTGTCGTGG +
Preference number: 2 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPGCCPS*SCALSW
Trigger: CCACGACAAAGCACAGCTCCAGCTCGGACAGCACCC...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCCTGGAAACCCTGCCTTaGGCAGCCCTGGAGGAGGCT +
Preference number: 2 (lower is better)
Translates to: EGICNLWASLFCLKLGRALETLP*AALEEA
Trigger: AGCCTCCTCCAGGGCTGCCCAAGGCAGGGTTTCCAG...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGACCCCGAGGCCTGGCTaGAAACCCTGCCTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGTPRPG*KPCLGQ
Trigger: CTGCCCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGT...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCGATGACCCCGAGGCCTaGCTGGAAACCCTGCCTTGG +
Preference number: 2 (lower is better)
Translates to: EGICNLWASLFCLKLGRADDPEA*LETLPW
Trigger: CCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGTCATC...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAGGGTGCTGTCCGAGCTaGAGCTGTGCTTTGTCGTGG +
Preference number: 2 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEGCCPS*SCALSW
Trigger: CCACGACAAAGCACAGCTCCAGCTCGGACAGCACCC...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCGCAATTCCTGCTGTCTaGGGAACCTGGCCCCCAGTA +
Preference number: 2 (lower is better)
Translates to: EGICNLWASLFCLKLGRAAIPAV*GTWPPV
Trigger: TACTGGGGGCCAGGTTCCCCAGACAGCAGGAATTGC...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAGCAATTCCTGCTGTCTaGGGAACCTGGCCCCCAGTA +
Preference number: 2 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGAIPAV*GTWPPV
Trigger: TACTGGGGGCCAGGTTCCCCAGACAGCAGGAATTGC...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 90 bp CGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTaGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTC +
Preference number: 2 (lower is better)
Translates to: RSATSRLCSTVRVTG*LDWLHRTSHFFSLF
Trigger: GAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR TCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGAGGCTGGCTGGCACTaGGGGTGCTGTCCGAGCTGG +
Preference number: 2 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWEAGWH*GCCPSW
Trigger: CCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTC...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCAAACTCCGGCTGCTCTaGACAGGGGCAATTCCTGCT +
Preference number: 2 (lower is better)
Translates to: EGICNLWASLFCLKLGRAKLRLL*TGAIPA
Trigger: AGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTT...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCACAGTTAGTCATAGGGTaGCCAACAGCCCTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPQLVIG*PTALRN
Trigger: GTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTG...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 90 bp CTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTaGGCTTGGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCAC +
Preference number: 2 (lower is better)
Translates to: LAALAIPSQTQTSGC*AWEILGPRSRVSWH
Trigger: GTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCACTCCTGGTGAAAAGATaGCCCCGAGGCCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSLLVKR*PRGLAG
Trigger: TCCAGCCAGGCCTCGGGGTCATCTTTTCACCAGGAG...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp TCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACGGTTCCAGAAACATCTaGGCCATGCGTAGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: SALLHCQGHWLVGLAAQNGSRNI*AMRSPD
Trigger: GTCAGGGCTACGCATGGCTCAGATGTTTCTGGAACC...GTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR CAA 90 bp TCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTaGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATG +
Preference number: 2 (lower is better)
Translates to: SATSRLCSTVRVTGL*DWLHRTSHFFSLFM
Trigger: CATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR TCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGCCTCCCTGTTCTGCCTaGAGTTGGGCAGGGCCCACT +
Preference number: 2 (lower is better)
Translates to: PRETLLSKLASCPFLGIGPPCSA*SWAGPT
Trigger: AGTGGGCCCTGCCCAACTTCAGGCAGAACAGGGAGG...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAACCCCGAGGCCTGGCTaGAAACCCTGCCTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTATPRPG*KPCLGQ
Trigger: CTGCCCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGT...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCTTCTCTTCTTCCTTGTaGTCCAGCAAACTCCGGCTG +
Preference number: 2 (lower is better)
Translates to: EGICNLWASLFCLKLGRAFSSSL*SSKLRL
Trigger: CAGCCGGAGTTTGCTGGACCACAAGGAAGAAGAGAA...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGGGTGGCCAACAGCCCTaGGGAACTGAGGTGGAGACA +
Preference number: 2 (lower is better)
Translates to: PRETLLSKLASCPFLGIGGGQQP*GTEVET
Trigger: TGTCTCCACCTCAGTTCCTCAGGGCTGTTGGCCACC...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGCTCCTGGTGAAAAGATaGCCCCGAGGCCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PRETLLSKLASCPFLGIGLLVKR*PRGLAG
Trigger: TCCAGCCAGGCCTCGGGGTCATCTTTTCACCAGGAG...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAAAACTCCGGCTGCTCTaGACAGGGGCAATTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSKLRLL*TGAIPA
Trigger: AGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTT...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp TCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACGGTTCCAGAAACATCTaGGCCATGCGTAGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: SAPLSGSLACWTGCTELHGSRNI*AMRSPD
Trigger: GTCAGGGCTACGCATGGCTCAGATGTTTCTGGAACC...GTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR GCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGATCCAGGAACACTGTaGCAGGAGTTACATTCCAAA +
Preference number: 2 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPDPGTL*QELHSK
Trigger: TTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATC...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTACCTCACTGAAGCTCTaGCGTGTCCTCTTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: TLAALAIPSQTQTSGCLATSLKL*RVLFQL
Trigger: TAACTGGAAGAGGACACGCCAGAGCTTCAGTGAGGT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 90 bp ACTGTGCCAGGAGTTACATTCCAAACGAGCAGGAGTTATTTTATTTaGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGG +
Preference number: 2 (lower is better)
Translates to: TVPGVTFQTSRSYFI*RACSPPRRVASCPR
Trigger: CCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCAAAATAAAATAACTCCTGCTCGTTTGGAATGTAACTCCTGGCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGCTCGGAAACCTCACTaGAGCTCTGGCGTGTCCTCT +
Preference number: 2 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLARKPH*SSGVSS
Trigger: AGAGGACACGCCAGAGCTTCAGTGAGGTTTCCGAGC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCTCCGAGCTGGAGCTGTaGTTTGTCGTGGCCTCAGTG +
Preference number: 2 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLSELEL*FVVASV
Trigger: CACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGA...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCAACAGGGGCAATTCCTaGTGTCTGGGGAACCTGGCC +
Preference number: 2 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLNRGNS*CLGNLA
Trigger: GGCCAGGTTCCCCAGACAGCAGGAATTGCCCCTGTT...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp CTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACAGAAACATCTGAGCCATaGGTAGCCCTGACGGAGAAG +
Preference number: 2 (lower is better)
Translates to: LLHCQGHWLVGLAAQNFTETSEP*VALTEK
Trigger: CTTCTCCGTCAGGGCTACGCATGGCTCAGATGTTTC...TGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR CCA 90 bp TCCAAACCAGAAATACACCTGAATAAACAGGTCAGAGAGTTCCTGTTGGAGGGAGTCCCCCACGCAGGGTaGCTTCCTGTCCGAGGACGG +
Preference number: 2 (lower is better)
Translates to: SKPEIHLNKQVREFLLEGVPHAG*LPVRGR
Trigger: CCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGAC...TCCCTCCAACAGGAACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp AGGCAGGTTGTCAGCAATGAGGTGGACGTAGTAGTCTTCTGTGATCCGCTCGGCGGGTCACTGGCTTGTTaGACTGGCTGCACAGAACTT +
Preference number: 2 (lower is better)
Translates to: RQVVSNEVDVVVFCDPLGGSLAC*TGCTEL
Trigger: AAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC...GCCGAGCGGATCACAGAAGACTACTACGTCCACCTCATTGCTGACAACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR TCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCAACCAGAAATACACCTaGATAAACAGGTCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: VLSELELCFVVASVVRMGNQKYT*INRSES
Trigger: ACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTT...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGCCAGCAAACTCCGGCTaGTCTGAACAGGGGCAATTC +
Preference number: 2 (lower is better)
Translates to: PRETLLSKLASCPFLGIGPANSG*SEQGQF
Trigger: GAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGG...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp GTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGGAAACATCTGAGCCATaGGTAGCCCTGACGGAGAAG +
Preference number: 2 (lower is better)
Translates to: VRVTGLLDWLHRTSHFFSETSEP*VALTEK
Trigger: CTTCTCCGTCAGGGCTACGCATGGCTCAGATGTTTC...CGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR CCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGGCTTGGGAAATACTTaGCCCCAGGTCCAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWGLGNT*PQVQGF
Trigger: GAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCC...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 90 bp GTTGGGAGTCCCACAAGGGCTGGTGCAAGGGTTAGCAGCTGCTACTaGAACCCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGA +
Preference number: 2 (lower is better)
Translates to: VGSPTRAGARVSSCY*NPNPWVDVVSCNLR
Trigger: TCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGCACCAGCCCTTGTGGGACTCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGCTGAGGTGGAGACAGTaGCCAAAACCCTTATCTCGG +
Preference number: 2 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWLRWRQ*PKPLSR
Trigger: CCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAG...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAAGAAATTCACTGGTTTaGTGGGTGAGGCTGGTAGAG +
Preference number: 2 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSRNSLV*WVRLVE
Trigger: CTCTACCAGCCTCACCCATCAAACCAGTGAATTTCT...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCCAGTTAGTCATAGGGTaGCCAACAGCCCTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLQLVIG*PTALRN
Trigger: GTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTG...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCATCCATTCCTGGGGATTaGGGAAAGAACGACAGAACT +
Preference number: 2 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSSIPGD*GKNDRT
Trigger: AGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGA...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTTGGGTTTGCTCCTGGTaGAAAGATGACCCCGAGGCC +
Preference number: 2 (lower is better)
Translates to: SCPFLGIGERTTELTFHLWVCSW*KDDPEA
Trigger: GGCCTCGGGGTCATCTTTTCACCAGGAGCAAACCCA...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAAAACCCTTATCTCGGTaGATTTATCCATCCTGGATC +
Preference number: 2 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSKPLSR*IYPSWI
Trigger: GATCCAGGATGGATAAATCCACCGAGATAAGGGTTT...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGAGACAAGTGGATGCTTaGCTTGGGAAATACTTGGCC +
Preference number: 2 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWRQVDA*LGKYLA
Trigger: GGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCT...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGTCCATTCCTGGGGATTaGGGAAAGAACGACAGAACT +
Preference number: 2 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWSIPGD*GKNDRT
Trigger: AGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGA...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGAGGTCCAGGGTTTCTTaGCACAAAAACAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: PRETLLSKLASCPFLGIGRSRVS*HKNSSL
Trigger: CAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR GCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAACAAAAACAGTTCACTaGAAGTCTCTTCTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSTKTVH*KSLLFF
Trigger: GAAGAAGAGAAGAGACTTGCAGTGAACTGTTTTTGT...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR TCA 90 bp CCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATCTGAGGTGGAGACAGTaGCCAAAACCCTTATCTCGG +
Preference number: 2 (lower is better)
Translates to: PNPWVDVVSCNLRANVCDLRWRQ*PKPLSR
Trigger: CCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAG...ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 90 bp TCCAAACCAGAAATACACCTGAATAAACAGGTCAGAGAGTTCCTGTaGGAGGGAACTTTCTTAGCACTGAAGAAAAAGCAACCCACAAAA +
Preference number: 2 (lower is better)
Translates to: SKPEIHLNKQVREFL*EGTFLALKKKQPTK
Trigger: TTTTGTGGGTTGCTTTTTCTTCAGTGCTAAGAAAGTTCCCTCCAACAGGAACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR GCA 72 bp TGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGCTGTaGTTTGTCGTGGCCTCAGTGGTGAGGATGGGCAGG +
Preference number: 3 (lower is better)
Translates to: WLALRVLSELEL*FVVASVVRMGR
Trigger: CCTGCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCACCCTCAGTGCCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAGCTGGAAACCCTGCCTaGGGCAGCCCTGGAGGAGGC +
Preference number: 3 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEAGNPA*GSPGGG
Trigger: GCCTCCTCCAGGGCTGCCCAAGGCAGGGTTTCCAGC...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR TCA 72 bp AGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTaGAGTTGGGCAGGGCCCACTGCTAGCACACCTTGG +
Preference number: 3 (lower is better)
Translates to: RGSVISGPPCSA*SWAGPTASTPW
Trigger: CCAAGGTGTGCTAGCAGTGGGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTAGGACCCTAGCGGCCTaGGCCATCCCTTCCCAGACA +
Preference number: 3 (lower is better)
Translates to: ECLATYRRGSVISGPPCSRTLAA*AIPSQT
Trigger: TGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCT...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCAAGTGGATGCTTGGCTaGGGAAATACTTGGCCCCAG +
Preference number: 3 (lower is better)
Translates to: EGICNLWASLFCLKLGRAKWMLG*GNTWPQ
Trigger: CTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTT...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp TGGGCAGGGAGAGGCTCGGAAACCTCACTGAAGCTCTaGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: WAGRGSETSLKL*RVLFQLVIGWP
Trigger: TGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGAGGTTTCCGAGCCTCTCCCTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp GGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTaGCTTGTTGGACTGGCTGCACAGAACTTCACACTT +
Preference number: 3 (lower is better)
Translates to: GHESALLHCQGH*LVGLAAQNFTL
Trigger: AAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR TCA 72 bp TCTTCTTCCTTGTGGTCCAGCAAACTCCGGCTGCTCTaGACAGGGGCAATTCCTGCTGTCTGGGGAACCTGG +
Preference number: 3 (lower is better)
Translates to: SSSLWSSKLRLL*TGAIPAVWGTW
Trigger: CCAGGTTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACAAGGAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp TTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTaGGGCAGTGAGGGGAGGGACATCTTCCTAGCATCA +
Preference number: 3 (lower is better)
Translates to: LMGEAGRATGRM*GSEGRDIFLAS
Trigger: TGATGCTAGGAAGATGTCCCTCCCCTCACTGCCCCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp GTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTaGACTGGCTGCACAGAACTTCACACTTCTTCTCGC +
Preference number: 3 (lower is better)
Translates to: VGSAPLSGSLAC*TGCTELHTSSR
Trigger: GCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR CAA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCCAGGTCCAGGGTTTCTaGGCACAAAAACAGTTCACT +
Preference number: 3 (lower is better)
Translates to: EGICNLWASLFCLKLGRAQVQGF*AQKQFT
Trigger: AGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTG...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR TCA 72 bp TCGCTCTCTACTGCTTGGGTTCCCTTTTCTCCAACTTaGTGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAC +
Preference number: 3 (lower is better)
Translates to: SLSTAWVPFSPT*CLVDAAWRCSH
Trigger: GTGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACCCAAGCAGTAGAGAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp CTGCTTGGGTTCCCTTTTCTCCAACTTGATGCTTGGTaGATGCCGCTTGGCGCTGCAGTCACTGTGAGGCAA +
Preference number: 3 (lower is better)
Translates to: LLGFPFLQLDAW*MPLGAAVTVRQ
Trigger: TTGCCTCACAGTGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACCCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR TCA 72 bp CCACAAGGGCTGGTGCAAGGGTTAGCAGCTGCTACTTaGACCCTAATCCCTGGGTGGATGTGGTCTCTTGTA +
Preference number: 3 (lower is better)
Translates to: PQGLVQGLAAAT*TLIPGWMWSLV
Trigger: TACAAGAGACCACATCCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGCACCAGCCCTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR GCA 72 bp TCTTCTCTTCTTCCTTGTGGTCCAGCAAACTCCGGCTaGTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAA +
Preference number: 3 (lower is better)
Translates to: SSLLPCGPANSG*SEQGQFLLSGE
Trigger: TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACAAGGAAGAAGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR GCA 72 bp ATTTGTCAGCTAGAGGTTCCAGAAACATCTGAGCCATaGGTAGCCCTGACGGAGAAGGCAGCCCTTTCAGGG +
Preference number: 3 (lower is better)
Translates to: ICQLEVPETSEP*VALTEKAALSG
Trigger: CCCTGAAAGGGCTGCCTTCTCCGTCAGGGCTACGCATGGCTCAGATGTTTCTGGAACCTCTAGCTGACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR CCA 72 bp CTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTaGCTGCACAGAACTTCACACTTCTTCTCGCTGTTC +
Preference number: 3 (lower is better)
Translates to: LCSTVRVTGLLD*LHRTSHFFSLF
Trigger: GAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR-3UTR CAA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGAGTTATTTTATTTaGCGTGCCTGCAGTCCCCCA +
Preference number: 3 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSRSYFI*RACSPP
Trigger: TGGGGGACTGCAGGCACGCAAAATAAAATAACTCCT...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR TCA 72 bp GTGGCCAACAGCCCTGAGGAACTGAGGTGGAGACAGTaGCCAAAACCCTTATCTCGGTGGATTTATCCATCC +
Preference number: 3 (lower is better)
Translates to: VANSPEELRWRQ*PKPLSRWIYPS
Trigger: GGATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCCTCAGGGCTGTTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp AGCCAGGCCAGCCACGTGAGACCCTTCTTTCTAAGTTaGCTTCTTGTCCATTCCTGGGGATTGGGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: SQASHVRPFFLS*LLVHSWGLGKE
Trigger: TTCTTTCCCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGGCTGGCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTAGGAGTTATTTTATTTaGCGTGCCTGCAGTCCCCCA +
Preference number: 3 (lower is better)
Translates to: ECLATYRRGSVISGPPCSRSYFI*RACSPP
Trigger: TGGGGGACTGCAGGCACGCAAAATAAAATAACTCCT...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCGTCAGAGAGTTCCTGTaGGAGGGAACTTTCTTAGCA +
Preference number: 3 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTAVREFL*EGTFLA
Trigger: TGCTAAGAAAGTTCCCTCCAACAGGAACTCTCTGAC...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCACCATCCTGGATCCATTaGTTAAAACAAAGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPPSWIH*LKQRRK
Trigger: TTTCCTTCTTTGTTTTAACAAATGGATCCAGGATGG...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGCCATCCTGGATCCATTaGTTAAAACAAAGAAGGAAA +
Preference number: 3 (lower is better)
Translates to: KERSGRGWLALRVLSELEPSWIH*LKQRRK
Trigger: TTTCCTTCTTTGTTTTAACAAATGGATCCAGGATGG...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR-3UTR CAA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTTGGCTTGGGAAATACTaGGCCCCAGGTCCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: SCPFLGIGERTTELTFHLWLGKY*APGPGF
Trigger: AAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCA...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp GCTTGGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTaGCACAAAAACAGTTCACTGCAAGTCTCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: AWEILGPRSRVS*HKNSSLQVSSL
Trigger: AAGAGAAGAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CCA 72 bp GCAAGGGTTAGCAGCTGCTACTTGAACCCTAATCCCTaGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAAT +
Preference number: 3 (lower is better)
Translates to: ARVSSCYLNPNP*VDVVSCNLRAN
Trigger: ATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGGGTAGCCCTCAGGCCTaGGTCAGGGGTCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPGSPQA*VRGPGG
Trigger: ACCTCCGGGACCCCTGACTCAGGCCTGAGGGCTACC...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR GCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCCGCTGCTCGGGGATCTaGCGGGGAATCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASRCSGI*RGIWLV
Trigger: CACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCG...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCCTCCCTGTTCTGCCTaGAGTTGGGCAGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPPPCSA*SWAGPT
Trigger: AGTGGGCCCTGCCCAACTTCAGGCAGAACAGGGAGG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCCTTGGGGCGAGGAGTTaGTACCCTCAGGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASLGARS*YPQAEC
Trigger: GCACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAG...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCACAGCAGAGCCACCATaGTGGGAAAGGGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASTAEPP*WERAPL
Trigger: GAGCGGTGCCCTTTCCCACCATGGTGGCTCTGCTGT...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGGATGACCCCGAGGCCTaGCTGGAAACCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKDDPEA*LETLPW
Trigger: CCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGTCATC...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCATCGCTGTCTCGGTTaGAGTAGAGCTCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPHRCLG*SRAPAG
Trigger: CCCGGCTGGAGCTCTACTCCAACCGAGACAGCGATG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCCGGTACGTGTGCTCCTaGTCCTCTTCCATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASRYVCS*SSSMSS
Trigger: GGAGGACATGGAAGAGGACCAGGAGCACACGTACCG...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGGGCGAGGAGTTaGTACCCTCAGGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKLGARS*YPQAEC
Trigger: GCACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAG...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCTGAAGACGTCGCCGTaGACCAACTTCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPLKTSP*TNFHPD
Trigger: GTCTGGGTGGAAGTTGGTGCACGGCGACGTCTTCAG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCAGATCCCGAACCACATaGACAGCAGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASRSRTT*TAEPPW
Trigger: CCATGGTGGCTCTGCTGTGCATGTGGTTCGGGATCT...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCACCTGGCTGGAAACCCTaGCTTGGGCAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPPGWKP*LGQPWR
Trigger: CCTCCAGGGCTGCCCAAGGCAGGGTTTCCAGCCAGG...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGGATGCCGCTTGGCGCTaGAGTCACTGTGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKDAAWR*SHCEAR
Trigger: TCTTGCCTCACAGTGACTGCAGCGCCAAGCGGCATC...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGCAGGGGTCCCGGAGGTaGCTCAGGGCCAGGCATGGG +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGQGSRR*LRARHG
Trigger: CCCATGCCTGGCCCTGAGCCACCTCCGGGACCCCTG...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR CCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGAGGACGGAGCAAGCTTaGCCGTGGTCCACTCCAATC +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPRTEQA*PWSTPI
Trigger: GATTGGAGTGGACCACGGCCAAGCTTGCTCCGTCCT...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCCAGGGAGAGAATGCCTaGCCACTTACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASQGENA*PLTGGD
Trigger: ATCCCCTCCTGTAAGTGGCCAGGCATTCTCTCCCTG...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCAGCAGGCTGTGGTCATaGGAGCTCCCCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EGICNLWASLFCLKLGRASRLWS*ELPGWR
Trigger: CCTCCAGCCGGGGAGCTCTCATGACCACAGCCTGCT...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGGCCACGAGTCGGCTCTaGTCCACTGTCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: SARPRVGSAPLSGSLACWATSRL*STVRVT
Trigger: AGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGC...CCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp TTCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGAGAGCTCCAGCCGGGTaGCCACAGGCAGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: FCDPLGHESALLHCQGHWRAPAG*PQAGCQ
Trigger: CTGACAACCTGCCTGTGGCCACCCGGCTGGAGCTCT...CCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450829.5
CDS-3UTR CCA 90 bp TCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGCATCGCTGTCTCGGTTaGAGTAGAGCTCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SARPRVGSAPLSGSLACWHRCLG*SRAPAG
Trigger: CCCGGCTGGAGCTCTACTCCAACCGAGACAGCGATG...CCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450829.5
CDS-3UTR CCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCCCTCCTTGTTGTAGTTaGCAATGTCCTTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASPPCCS*QCPSGG
Trigger: CCCTCCGGAAGGACATTGCCAACTACAACAAGGAGG...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAACCCCGAGGCCTGGCTaGAAACCCTGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGTPRPG*KPCLGQ
Trigger: CTGCCCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGT...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGACTGCTAGCACACCTTaGAGAGCGGTACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKTASTP*RAVPPE
Trigger: CTCAGGAGGTACCGCTCTCCAAGGTGTGCTAGCAGT...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGGAACAGCTGAATGCCTaGGCCCAGCAGGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELEEQLNA*AQQGAE
Trigger: CTCAGCTCCCTGCTGGGCTCAGGCATTCAGCTGTTC...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTAGCAGGCTGTGGTCATaGGAGCTCCCCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLASRLWS*ELPGWR
Trigger: CCTCCAGCCGGGGAGCTCTCATGACCACAGCCTGCT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCTGAGGTGGAGACAGTaGCCAAAACCCTTATCTCGG +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPLRWRQ*PKPLSR
Trigger: CCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGGGTGGCCAACAGCCCTaGGGAACTGAGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELEGGQQP*GTEVET
Trigger: TGTCTCCACCTCAGTTCCTCAGGGCTGTTGGCCACC...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCCTCCTGGTGAAAAGATaGCCCCGAGGCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGLLVKR*PRGLAG
Trigger: TCCAGCCAGGCCTCGGGGTCATCTTTTCACCAGGAG...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCACTCCTGGTGAAAAGATaGCCCCGAGGCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPLLVKR*PRGLAG
Trigger: TCCAGCCAGGCCTCGGGGTCATCTTTTCACCAGGAG...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAGAGAGCGGTACCTCCTaGGGAAAGGGCTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGESGTS*GKGWGV
Trigger: CACTCCCCAGCCCTTTCCTCAGGAGGTACCGCTCTC...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCATTCATGTACCACCGCTaGTCGGGGATCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPFMYHR*SGICRG
Trigger: TCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAA...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTCCTGGCTGGAAACCCTaGCTTGGGCAGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLAPGWKP*LGQPWR
Trigger: CCTCCAGGGCTGCCCAAGGCAGGGTTTCCAGCCAGG...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKCRLSC*AGRRAV
Trigger: CACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACA...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCGTCCCCCACGCAGGGTaGCTTCCTGTCCGAGGACGG +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSVPHAG*LPVRGR
Trigger: CCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGAC...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGAGTGGATGCTTGGCTTaGGAAATACTTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKSGCLA*EILGPR
Trigger: CCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACT...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAAGCCCAGCAGGGAGCTaGGGATCATGGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGESPAGS*GSWGTG
Trigger: CCCAGTACCCCATGATCCTCAGCTCCCTGCTGGGCT...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCCGGGTGGGCAGAGGTTaGAAAGAACAGGGGTCTACG +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGRVGRG*KEQGST
Trigger: CGTAGACCCCTGTTCTTTTCAACCTCTGCCCACCCG...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCGAACTCTTCTCATCTaGTTTGAGGTCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPRTLLI*FEVLQP
Trigger: AGGCTGGAGGACCTCAAAGCAGATGAGAAGAGTTCG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGTCCGAGCTGGAGCTGTaGTTTGTCGTGGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELESELEL*FVVASV
Trigger: CACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGA...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCAGGGCAGGGAGAGAATaGCTGGCCACTTACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGRAGRE*LATYRR
Trigger: CCTCCTGTAAGTGGCCAGGCATTCTCTCCCTGCCCT...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAAGAGCTCCAGCCGGGTaGCCACAGGCAGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGERAPAG*PQAGCQ
Trigger: CTGACAACCTGCCTGTGGCCACCCGGCTGGAGCTCT...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELEAGESG*CAQGCH
Trigger: ATGACAACCCTGTGCGCACCAACCAGATTCCCCGGC...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTGCTGTCTGGGGAACCTaGCCCCCAGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLAAVWGT*PPVLPG
Trigger: CCCTGGAAGTACTGGGGGCCAGGTTCCCCAGACAGC...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAGCTGTCTGGGGAACCTaGCCCCCAGTACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEAVWGT*PPVLPG
Trigger: CCCTGGAAGTACTGGGGGCCAGGTTCCCCAGACAGC...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGGATGACATGCACGGGTaGGCAGAGGTTGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKDDMHG*AEVEKN
Trigger: GTTCTTTTCAACCTCTGCCCACCCGTGCATGTCATC...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAAGAGGAGAGAGGGGATaGACTCCACGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPRGERG*TPRCPA
Trigger: AGCTGGACATCGTGGAGTTCATCCCCTCTCTCCTCT...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCTGGGTTTGCTCCTGGTaGAAAGATGACCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: EGICNLWASLFCLKLGRAWVCSW*KDDPEA
Trigger: GGCCTCGGGGTCATCTTTTCACCAGGAGCAAACCCA...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCGAGAATGTGGGGCAGTaGGGGGAGGGACATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EGICNLWASLFCLKLGRAENVGQ*GEGHLP
Trigger: AGGAAGATGTCCCTCCCCTCACTGCCCCACATTCTC...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTGCCACGAGTCGGCTCTaGTCCACTGTCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLAATSRL*STVRVT
Trigger: AGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGC...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCTTGATGCTTGGTGGATaGCGCTTGGCGCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGLMLGG*RLALQS
Trigger: TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAA...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCGCCCTTTCAGGGGCTTaGTCAAGAACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SVIRSATSRLCSTVRVTGALSGA*SRTSSL
Trigger: GAGAGAACTGGTTCTTGAGCAAGCCCCTGAAAGGGC...GCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGACGGGATCGTTCTGGTaGAAGTTGATAGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELETGSFW*KLIGAT
Trigger: GGTCGCGCCTATCAACTTCCACCAGAACGATCCCGT...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCACACTGTCAGGGTCACTaGCTTGTTGGACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPHCQGH*LVGLAA
Trigger: TGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTG...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGCACTGTCAGGGTCACTaGCTTGTTGGACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELEHCQGH*LVGLAA
Trigger: TGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTG...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGCTGGAAACCCTGCCTTaGGCAGCCCTGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRLETLP*AALEEA
Trigger: AGCCTCCTCCAGGGCTGCCCAAGGCAGGGTTTCCAG...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGGGCTTGGGAAATACTTaGCCCCAGGTCCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELEGLGNT*PQVQGF
Trigger: GAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCC...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGCTCCAACTTGATGCTTaGTGGATGCCGCTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELELQLDA*WMPLGA
Trigger: AGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAG...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAGCAAGATCCCAGCCATaGGGATGCCCACAAATCGGT +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGARSQP*GCPQIG
Trigger: ACCGATTTGTGGGCATCCTCATGGCTGGGATCTTGC...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGAGAAGGACAAGACCATaGGGGCCGTGTAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELERRTRP*GPCSQS
Trigger: ACTTTGGCTACACGGCCCTCATGGTCTTGTCCTTCT...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCCTGAGGTGGAGACAGTaGCCAAAACCCTTATCTCGG +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGLRWRQ*PKPLSR
Trigger: CCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAG...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGCTCGGAAACCTCACTaGAGCTCTGGCGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGARKPH*SSGVSS
Trigger: AGAGGACACGCCAGAGCTTCAGTGAGGTTTCCGAGC...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCTTAGCAGCTGCTACTTaGACCCTAATCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGLAAAT*TLIPGW
Trigger: CCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAA...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTGGACGTAGTAGTCTTCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACGGTTCCAGAAACATCTaGGCCATGCGTAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: VDVVVFCDPLGHESALLHGSRNI*AMRSPD
Trigger: GTCAGGGCTACGCATGGCTCAGATGTTTCTGGAACC...GTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGAAGACTACTACGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp TGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CDPLGHESALLHCQGHWLPCRLS*WAGRRA
Trigger: TGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGG...AAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp GTCAGCAATGAGGTGGACGTAGTAGTCTTCTGTGATCCGCTCGGCCACGAGTCGGCCACGAGTCGGCTCTaGTCCACTGTCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: VSNEVDVVVFCDPLGHESATSRL*STVRVT
Trigger: AGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGC...CGACTCGTGGCCGAGCGGATCACAGAAGACTACTACGTCCACCTCATTGCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATTTATTTTGCGTGCCTaGAGTCCCCCACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGFILRA*SPPRRV
Trigger: CACCCTGCGTGGGGGACTGCAGGCACGCAAAATAAA...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGGATCCAGGAACACTGTaGCAGGAGTTACATTCCAAA +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPDPGTL*QELHSK
Trigger: TTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATC...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGATGGGCCTCCCTGTTCTaGCTGAAGTTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QPQDPGTLCQELHSKRAGWASLF*LKLGRA
Trigger: GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCA...TCCTGCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTTGGGCCTCCCTGTTCTaGCTGAAGTTGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSWASLF*LKLGRA
Trigger: GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCA...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGAATATCGCTCTCTACTaGTTGGGTTCCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPNIALY*LGSLFS
Trigger: GGAGAAAAGGGAACCCAAGCAGTAGAGAGCGATATT...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCCCTTTCAGGGGCTTaGTCAAGAACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGHESALLHCQGHWLVGLALSGA*SRTSSL
Trigger: GAGAGAACTGGTTCTTGAGCAAGCCCCTGAAAGGGC...CAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GTGGACGTAGTAGTCTTCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACACGGGATCGTTCTGGTaGAAGTTGATAGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: VDVVVFCDPLGHESALLHTGSFW*KLIGAT
Trigger: GGTCGCGCCTATCAACTTCCACCAGAACGATCCCGT...GTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGAAGACTACTACGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAGCAGAGCCACCATGGTaGGAAAGGGCACCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSAEPPW*ERAPLL
Trigger: CAGGAGCGGTGCCCTTTCCCACCATGGTGGCTCTGC...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGGGGTGCTGTCCGAGCTaGAGCTGTGCTTTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRGCCPS*SCALSW
Trigger: CCACGACAAAGCACAGCTCCAGCTCGGACAGCACCC...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAAGGGAAAGAGAGGTCTaGCAGAGGCTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEREREV*QRLAGT
Trigger: AGTGCCAGCCAGCCTCTGCCAGACCTCTCTTTCCCT...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAGATGACCCCGAGGCCTaGCTGGAAACCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSDDPEA*LETLPW
Trigger: CCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGTCATC...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGAGTGGATGCTTGGCTTaGGAAATACTTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELESGCLA*EILGPR
Trigger: CCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACT...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCGGGATCTGTAATCTCTaGGCCTCCCTGTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: EGICNLWASLFCLKLGRAGICNL*ASLFCL
Trigger: CAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCC...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGACAGGGAGAGAATGCCTaGCCACTTACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGQGENA*PLTGGD
Trigger: ATCCCCTCCTGTAAGTGGCCAGGCATTCTCTCCCTG...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTCTTCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTCTTCTCGCTGTTCATaGGAACCTGGAAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: VFCDPLGHESALLHCQGHSSRCS*EPGKGC
Trigger: ACACCCCTTTCCAGGTTCTCATGAACAGCGAGAAGA...GTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442842.5
CDS-3UTR TCA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGAGTGCTTTCCCCAAATaGAGCAATTCAATACGAAGC +
Preference number: 4 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKSAFPK*SNSIRS
Trigger: GCTTCGTATTGAATTGCTTCATTTGGGGAAAGCACT...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGCAAGATCCCAGCCATaGGGATGCCCACAAATCGGT +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGARSQP*GCPQIG
Trigger: ACCGATTTGTGGGCATCCTCATGGCTGGGATCTTGC...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGTGGGTTTGCTCCTGGTaGAAAGATGACCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRWVCSW*KDDPEA
Trigger: GGCCTCGGGGTCATCTTTTCACCAGGAGCAAACCCA...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGCGGGTGGGCAGAGGTTaGAAAGAACAGGGGTCTACG +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRRVGRG*KEQGST
Trigger: CGTAGACCCCTGTTCTTTTCAACCTCTGCCCACCCG...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGGAGAATGTGGGGCAGTaGGGGGAGGGACATCTTCCT +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRENVGQ*GEGHLP
Trigger: AGGAAGATGTCCCTCCCCTCACTGCCCCACATTCTC...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGACCCTTTTCTCCAACTTaGTGCTTGGTGGATGCCGCT +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGPFSPT*CLVDAA
Trigger: AGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGG...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGACGACACGGTACGTGTaGTCCTGGTCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGTTRYV*SWSSSM
Trigger: CATGGAAGAGGACCAGGAGCACACGTACCGTGTCGT...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTTTCATGTACCACCGCTaGTCGGGGATCTGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSFMYHR*SGICRG
Trigger: TCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAA...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGCCAGCAAACTCCGGCTaGTCTGAACAGGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGPANSG*SEQGQF
Trigger: GAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGG...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGGTGCTGGAAGATCCTaGGATACCCCGGAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLGAGRS*DTPEGP
Trigger: GGGGCCCTCCGGGGTATCCCAGGATCTTCCAGCACC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCAGGGCCAGGGAGGTaGATTTCGGGGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSAGPGR*ISGKTS
Trigger: GCTTGTCTTCCCCGAAATCCACCTCCCTGGCCCTGC...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR CCA 90 bp TCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACACGGGATCGTTCTGGTaGAAGTTGATAGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: SALLHCQGHWLVGLAAQNTGSFW*KLIGAT
Trigger: GGTCGCGCCTATCAACTTCCACCAGAACGATCCCGT...GTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ESALLHCQGHWLVGLAAQCRLSC*AGRRAV
Trigger: CACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACA...CTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAACTGGCTTGTTGGACTaGCTGCACAGAACTTCACAC +
Preference number: 4 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPTGLLD*LHRTSH
Trigger: GTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGT...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCTCCAGCCTGATGCTCTaGGGAATCACCTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSSSLML*GITSKR
Trigger: CCGCTTCGAGGTGATTCCCCAGAGCATCAGGCTGGA...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCATCTGCCGGGGAATCTaGTTGGTGCGCACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSICRGI*LVRTGL
Trigger: CAACCCTGTGCGCACCAACCAGATTCCCCGGCAGAT...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGACCCCGAGGCCTGGCTaGAAACCCTGCCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGTPRPG*KPCLGQ
Trigger: CTGCCCAAGGCAGGGTTTCCAGCCAGGCCTCGGGGT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCTTCTCTTCTTCCTTGTaGTCCAGCAAACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGFSSSL*SSKLRL
Trigger: CAGCCGGAGTTTGCTGGACCACAAGGAAGAAGAGAA...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCGTAGTAGTCTTCTGTaGTCCGCTCGGCCACGAGTC +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTARSSLL*SARPRV
Trigger: GACTCGTGGCCGAGCGGATCACAGAAGACTACTACG...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCCATGCTCAGGATACCTaGCAGGAAGAAGACCACAAC +
Preference number: 4 (lower is better)
Translates to: EGICNLWASLFCLKLGRAHAQDT*QEEDHN
Trigger: GTTGTGGTCTTCTTCCTGTCAGGTATCCTGAGCATG...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCAAAATTGATGATCTTTaGACCCTTTATGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASKIDDL*TLYEVS
Trigger: GGACACCTCATAAAGGGTTCAAAGATCATCAATTTT...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGGCTTGTTGGACTGGCTaGACAGAACTTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELEACWTG*TELHTS
Trigger: AGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGC...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGCTTGTTGGACTGGCTaGACAGAACTTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: ARPRVGSAPLSGSLACWTACWTG*TELHTS
Trigger: AGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGC...AGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAGATGCCGCTTGGCGCTaGAGTCACTGTGAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSDAAWR*SHCEAR
Trigger: TCTTGCCTCACAGTGACTGCAGCGCCAAGCGGCATC...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGACGGGATCGTTCTGGTaGAAGTTGATAGGCGCGACC +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRTGSFW*KLIGAT
Trigger: GGTCGCGCCTATCAACTTCCACCAGAACGATCCCGT...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTTCTACGGGATCGTTCTaGTGGAAGTTGATAGGCGCG +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLASTGSF*WKLIGA
Trigger: CGCGCCTATCAACTTCCACCAGAACGATCCCGTAGA...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTCTACGGGATCGTTCTaGTGGAAGTTGATAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SALLHCQGHWLVGLAAQNSTGSF*WKLIGA
Trigger: CGCGCCTATCAACTTCCACCAGAACGATCCCGTAGA...GTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAACTGGCTTGTTGGACTaGCTGCACAGAACTTCACAC +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGTGLLD*LHRTSH
Trigger: GTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGT...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGAGAGCTCCAGCCGGGTaGCCACAGGCAGGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGRAPAG*PQAGCQ
Trigger: CTGACAACCTGCCTGTGGCCACCCGGCTGGAGCTCT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGACCCAGACTCCTCCATaGTGTCTTCAATGTCATCCT +
Preference number: 4 (lower is better)
Translates to: KERSGRGWLALRVLSELETQTPP*CLQCHP
Trigger: AGGATGACATTGAAGACACCATGGAGGAGTCTGGGT...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGCAGAGCCACCATGGTaGGAAAGGGCACCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWAEPPW*ERAPLL
Trigger: CAGGAGCGGTGCCCTTTCCCACCATGGTGGCTCTGC...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSAGESG*CAQGCH
Trigger: ATGACAACCCTGTGCGCACCAACCAGATTCCCCGGC...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCGCAATTCCTGCTGTCTaGGGAACCTGGCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTAAIPAV*GTWPPV
Trigger: TACTGGGGGCCAGGTTCCCCAGACAGCAGGAATTGC...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTGAGGCTGGCTGGCACTaGGGGTGCTGTCCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLEAGWH*GCCPSW
Trigger: CCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTC...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGAGAGCGGTACCTCCTaGGGAAAGGGCTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAESGTS*GKGWGV
Trigger: CACTCCCCAGCCCTTTCCTCAGGAGGTACCGCTCTC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCTTAGCAGCTGCTACTTaGACCCTAATCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSLAAAT*TLIPGW
Trigger: CCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAA...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAGCGCTGCAGTCACTGTaGGGCAAGATTGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEALQSL*GKIEKF
Trigger: GAATTTCTCAATCTTGCCTCACAGTGACTGCAGCGC...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCTCTTTGAACCCTTTATaGGGTGTCCGTTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGSLNPL*GVRFPF
Trigger: GAATGGGAAACGGACACCTCATAAAGGGTTCAAAGA...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGGGGGAATCTGGTTGGTaGGCACAGGGTTGTCATATG +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRGESGW*AQGCHM
Trigger: CATATGACAACCCTGTGCGCACCAACCAGATTCCCC...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTCCAGCAAACTCCGGCTaGTCTGAACAGGGGCAATTC +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSPANSG*SEQGQF
Trigger: GAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGG...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGCAAGGGTTAGCAGCTaGTACTTGAACCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGARVSS*YLNPNP
Trigger: GGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGC...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCTTGATGCTTGGTGGATaGCGCTTGGCGCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTALMLGG*RLALQS
Trigger: TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAA...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GTCTTCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACCCTTCCCAGATTCTCTaGCTTGTAGGTTATCTTGCT +
Preference number: 4 (lower is better)
Translates to: VFCDPLGHESALLHCQGHPSQIL*LVGYLA
Trigger: AGCAAGATAACCTACAAGGCAGAGAATCTGGGAAGG...GTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp TTCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCCTTCCCAGATTCTCTaGCTTGTAGGTTATCTTGCT +
Preference number: 4 (lower is better)
Translates to: FCDPLGHESALLHCQGHWPSQIL*LVGYLA
Trigger: AGCAAGATAACCTACAAGGCAGAGAATCTGGGAAGG...CCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTACGGCAACCAATCAGTaGGCGGAGACCAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLATATNQ*AETKSR
Trigger: TCTACTTTTGGTCTCCGCCCACTGATTGGTTGCCGT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR CCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSCRLSC*AGRRAV
Trigger: CACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACA...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGGGGTCACTGGCTTGTTaGACTGGCTGCACAGAACTT +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRGSLAC*TGCTEL
Trigger: AAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGCATCGCTGTCTCGGTTaGAGTAGAGCTCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWHRCLG*SRAPAG
Trigger: CCCGGCTGGAGCTCTACTCCAACCGAGACAGCGATG...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCGTGGGGTCAATTTCTTaGGGCGAGGAGTTGGTACCC +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTAVGSIS*GEELVP
Trigger: GGGTACCAACTCCTCGCCCCAAGAAATTGACCCCAC...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCGCTGATTCTCCTTGGTaGGGTCAATTTCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSADSPW*GQFLGA
Trigger: CGCCCCAAGAAATTGACCCCACCAAGGAGAATCAGC...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTGTCCCCCACGCAGGGTaGCTTCCTGTCCGAGGACGG +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLVPHAG*LPVRGR
Trigger: CCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGAC...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTCAACTTGATGCTTGGTaGATGCCGCTTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSQLDAW*MPLGAA
Trigger: TGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTG...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTCTCCAACTTGATGCTTaGTGGATGCCGCTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSLQLDA*WMPLGA
Trigger: AGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAG...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp TTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTaGGCTTGGGAAATACTTGGCCCCAGGTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LAIPSQTQTSGC*AWEILGPRSRV
Trigger: AACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp CCCACAAGGGCTGGTGCAAGGGTTAGCAGCTGCTACTaGAACCCTAATCCCTGGGTGGATGTGGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTRAGARVSSCY*NPNPWVDVVSC
Trigger: ACAAGAGACCACATCCACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGCACCAGCCCTTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp AGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTaGGACTGGCTGCACAGAACTTCACACTTCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SRLCSTVRVTGL*DWLHRTSHFFS
Trigger: CGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
3UTR CAA 72 bp ACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTaGTTGGACTGGCTGCACAGAACTTCACACTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSRLCSTVRVTG*LDWLHRTSHFF
Trigger: GAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR TCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGAGTGGACAGAGTAGGTaGAGTACAGCTGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGSGQSR*STADSP
Trigger: AGGAGAATCAGCTGTACTTCACCTACTCTGTCCACT...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp CAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGAATCATACAGAACAGCTaGATGCCTGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QPQDPGTLCQELHSKRAGIIQNS*MPEPSR
Trigger: CCTGCTGGGCTCAGGCATTCAGCTGTTCTGTATGAT...TCCTGCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTGACGATGCTGATTTGTaGACAGGATACCACCAGGAT +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLADDADL*TGYHQD
Trigger: ATCCTGGTGGTATCCTGTTCACAAATCAGCATCGTC...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCAGAAGGACAAGACCATaGGGGCCGTGTAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTARRTRP*GPCSQS
Trigger: ACTTTGGCTACACGGCCCTCATGGTCTTGTCCTTCT...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTAGAAATTCACTGGTTTaGTGGGTGAGGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLARNSLV*WVRLVE
Trigger: CTCTACCAGCCTCACCCATCAAACCAGTGAATTTCT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAAGAAATTCACTGGTTTaGTGGGTGAGGCTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGERNSLV*WVRLVE
Trigger: CTCTACCAGCCTCACCCATCAAACCAGTGAATTTCT...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATCTTTGAACCCTTTATaGGGTGTCCGTTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGSLNPL*GVRFPF
Trigger: GAATGGGAAACGGACACCTCATAAAGGGTTCAAAGA...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLHCQGHWLVGLAAQNFTPCRLS*WAGRRA
Trigger: TGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGG...TGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp TCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACGCTTGTTGGACTGGCTaGACAGAACTTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: SALLHCQGHWLVGLAAQNACWTG*TELHTS
Trigger: AGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGC...GTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp GAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCCTGAAGTTGGGCAGGGCCCAGCAGCATAGATCTTaGGAACAAACATGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: EGICNLWASLFCLKLGRAQQHRS*EQTCRL
Trigger: CAGCCTACATGTTTGTTCGCAAGATCTATGCTGCTG...GGCCCTGCCCAACTTCAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGTCCGAGCTGGAGCTGTaGTTTGTCGTGGCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWSELEL*FVVASV
Trigger: CACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGA...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGAACAGGGGCAATTCCTaGTGTCTGGGGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWNRGNS*CLGNLA
Trigger: GGCCAGGTTCCCCAGACAGCAGGAATTGCCCCTGTT...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGGGCAGGGAGAGAATaGCTGGCCACTTACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCRAGRE*LATYRR
Trigger: CCTCCTGTAAGTGGCCAGGCATTCTCTCCCTGCCCT...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCACCAGGCATGGGGTGCTaGAAGATCCTGGGATACCCC +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAPGMGC*KILGYP
Trigger: GGGGTATCCCAGGATCTTCCAGCACCCCATGCCTGG...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAGGGTCACTGGCTTGTTaGACTGGCTGCACAGAACTT +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSGSLAC*TGCTEL
Trigger: AAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACAGGGTCACTGGCTTGTTaGACTGGCTGCACAGAACTT +
Preference number: 4 (lower is better)
Translates to: LLHCQGHWLVGLAAQNFTGSLAC*TGCTEL
Trigger: AAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC...TGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp TGTCAGCTAGAGGTTCCAGAAACATCTGAGCCATGCGTAGCCCTGACGGAGAAGCACTGTCAGGGTCACTaGCTTGTTGGACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CQLEVPETSEPCVALTEKHCQGH*LVGLAA
Trigger: TGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTG...CTTCTCCGTCAGGGCTACGCATGGCTCAGATGTTTCTGGAACCTCTAGCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGTCCAGCCTGATGCTCTaGGGAATCACCTCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGSSLML*GITSKR
Trigger: CCGCTTCGAGGTGATTCCCCAGAGCATCAGGCTGGA...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGCTGATTCTCCTTGGTaGGGTCAATTTCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSADSPW*GQFLGA
Trigger: CGCCCCAAGAAATTGACCCCACCAAGGAGAATCAGC...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCTCTGGACGTCACTCATaGTCAGGTAAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTASGRHS*SGKCPS
Trigger: GCTGGGACACTTACCTGACCATGAGTGACGTCCAGA...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTTCTGGACGTCACTCATaGTCAGGTAAGTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSSGRHS*SGKCPS
Trigger: GCTGGGACACTTACCTGACCATGAGTGACGTCCAGA...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCATGATAGAAAACCAGTaGATCTGGACGTCACTCATG +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGMIENQ*IWTSLM
Trigger: CATGAGTGACGTCCAGATCCACTGGTTTTCTATCAT...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCACCTCCTTGTTGTAGTTaGCAATGTCCTTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSPPCCS*QCPSGG
Trigger: CCCTCCGGAAGGACATTGCCAACTACAACAAGGAGG...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGCACAGGGTTGTCATATaGCTGCTTTCGGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRHRVVI*LLSEAE
Trigger: TTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTG...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTCTGCATAGAAGCCGATaGTACCCGTTAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSLHRSR*YPLAAR
Trigger: TCTGGCTGCTAACGGGTACCATCGGCTTCTATGCAG...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCAAACCCTTATCTCGGTaGATTTATCCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VLSELELCFVVASVVRMGKPLSR*IYPSWI
Trigger: GATCCAGGATGGATAAATCCACCGAGATAAGGGTTT...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGACAGTTAGTCATAGGGTaGCCAACAGCCCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: QPQDPGTLCQELHSKRAGQLVIG*PTALRN
Trigger: GTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTG...TCCTGCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGGGTGCTGTCCGAGCTaGAGCTGTGCTTTGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAGCCPS*SCALSW
Trigger: CCACGACAAAGCACAGCTCCAGCTCGGACAGCACCC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGAGGGAAAGAGAGGTCTaGCAGAGGCTGGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGREREV*QRLAGT
Trigger: AGTGCCAGCCAGCCTCTGCCAGACCTCTCTTTCCCT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGAGACAAGTGGATGCTTaGCTTGGGAAATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGRQVDA*LGKYLA
Trigger: GGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCT...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGACCCTAATCCCTGGGTaGATGTGGTCTCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGTLIPG*MWSLVT
Trigger: AGTTACAAGAGACCACATCCACCCAGGGATTAGGGT...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp GAGCCAGGCCAGCCACGTGAGACCCTTCTTTCTAAGTaGGCTTCTTGTCCATTCCTGGGGATTGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: EPGQPRETLLSK*ASCPFLGIGER
Trigger: TCTTTCCCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGGCTGGCCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp CAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTaGAAAAGAACAGGGGTCTACGGAGGAGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QMFVMTCTGGQR*KRTGVYGGARP
Trigger: TGGCCTGGCTCCTCCGTAGACCCCTGTTCTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp CATCTTCCTAGCATCACCAGCATCCTGAGCTTTGTCTaGTGTTGGGAGTCCCACAAGGGCTGGTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: HLPSITSILSFV*CWESHKGWCKG
Trigger: ACCCTTGCACCAGCCCTTGTGGGACTCCCAACACAAGACAAAGCTCAGGATGCTGGTGATGCTAGGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTTCTTCTCGCTGTTCATaGGAACCTGGAAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSSSRCS*EPGKGC
Trigger: ACACCCCTTTCCAGGTTCTCATGAACAGCGAGAAGA...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTAGCGAGAGGCCCATTTaGTATCACTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSSERPI*YHFPPS
Trigger: ACTGGGAGGAAAGTGATATCAAATGGGCCTCTCGCT...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTAGCCCAGCAGGGAGCTaGGGATCATGGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLSPAGS*GSWGTG
Trigger: CCCAGTACCCCATGATCCTCAGCTCCCTGCTGGGCT...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGAAACTCCGGCTGCTCTaGACAGGGGCAATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWKLRLL*TGAIPA
Trigger: AGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTT...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAACTCCGGCTGCTCTaGACAGGGGCAATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCKLRLL*TGAIPA
Trigger: AGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTT...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCCTCCCTGTTCTGCCTaGAGTTGGGCAGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLPPCSA*SWAGPT
Trigger: AGTGGGCCCTGCCCAACTTCAGGCAGAACAGGGAGG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGACGACACGGTACGTGTaGTCCTGGTCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGTTRYV*SWSSSM
Trigger: CATGGAAGAGGACCAGGAGCACACGTACCGTGTCGT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGAGATCCCGAACCACATaGACAGCAGAGCCACCATGG +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGRSRTT*TAEPPW
Trigger: CCATGGTGGCTCTGCTGTGCATGTGGTTCGGGATCT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTAACAAACATGTAGGCTaGATAGAAGCCGATGGTACC +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLANKHVG*IEADGT
Trigger: GGTACCATCGGCTTCTATGCAGCCTACATGTTTGTT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAACAGGGGCAATTCCTaGTGTCTGGGGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTANRGNS*CLGNLA
Trigger: GGCCAGGTTCCCCAGACAGCAGGAATTGCCCCTGTT...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTGAAACATCTGAGCCATaGGTAGCCCTGACGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSLACWTGCTELHTSSRCETSEP*VALTEK
Trigger: CTTCTCCGTCAGGGCTACGCATGGCTCAGATGTTTC...ACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGTCTACGGGATCGTTCTaGTGGAAGTTGATAGGCGCG +
Preference number: 4 (lower is better)
Translates to: VRVTGLLDWLHRTSHFFSSTGSF*WKLIGA
Trigger: CGCGCCTATCAACTTCCACCAGAACGATCCCGTAGA...CGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTCTGTTCATGAGAACCTaGAAAGGGGTGTTGACAATC +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLALFMRT*KGVLTI
Trigger: GATTGTCAACACCCCTTTCCAGGTTCTCATGAACAG...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AGGCAGGTTGTCAGCAATGAGGTGGACGTAGTAGTCTTCTGTGATCCGCTCGGCACTGGCTTGTTGGACTaGCTGCACAGAACTTCACAC +
Preference number: 4 (lower is better)
Translates to: RQVVSNEVDVVVFCDPLGTGLLD*LHRTSH
Trigger: GTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGT...GCCGAGCGGATCACAGAAGACTACTACGTCCACCTCATTGCTGACAACCTGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp TCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTGGCTTGTTGGACTaGCTGCACAGAACTTCACAC +
Preference number: 4 (lower is better)
Translates to: SAPLSGSLACWTGCTELHTGLLD*LHRTSH
Trigger: GTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGT...GTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp TCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCGGGTCACTGGCTTGTTaGACTGGCTGCACAGAACTT +
Preference number: 4 (lower is better)
Translates to: SGSLACWTGCTELHTSSRGSLAC*TGCTEL
Trigger: AAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC...GCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAGAAAACCAGTGGATCTaGACGTCACTCATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSENQWI*TSLMVR
Trigger: CCTGACCATGAGTGACGTCCAGATCCACTGGTTTTC...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAATCTGCCGGGGAATCTaGTTGGTGCGCACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAICRGI*LVRTGL
Trigger: CAACCCTGTGCGCACCAACCAGATTCCCCGGCAGAT...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCTCCTCTGCACACAGCTaGAAGTACACCATGACGATG +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTASSAHS*KYTMTM
Trigger: CATCGTCATGGTGTACTTCCAGCTGTGTGCAGAGGA...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCGGCTTGGGAAATACTTaGCCCCAGGTCCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCGLGNT*PQVQGF
Trigger: GAAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCC...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCGGGATCTGTAATCTCTaGGCCTCCCTGTTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCGICNL*ASLFCL
Trigger: CAGGCAGAACAGGGAGGCCCAGAGATTACAGATCCC...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAACCCTTCTTTCTAAGTTaGCTTCTTGTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEPFFLS*LLVHSW
Trigger: CCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGG...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGACCCTAATCCCTGGGTaGATGTGGTCTCTTGTAACT +
Preference number: 4 (lower is better)
Translates to: ACPLPVSHRVANSPEELRTLIPG*MWSLVT
Trigger: AGTTACAAGAGACCACATCCACCCAGGGATTAGGGT...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCCAACTTGATGCTTGGTaGATGCCGCTTGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCQLDAW*MPLGAA
Trigger: TGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTG...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp GGAGTTACATTCCAAACGAGCAGGAGTTATTTTATTTaGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GVTFQTSRSYFI*RACSPPRRVAS
Trigger: GGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCAAAATAAAATAACTCCTGCTCGTTTGGAATGTAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAATAGTAAAGGATGAATaGGAGGTGGTTGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGEIVKDE*EVVVQV
Trigger: TACCTGCACAACCACCTCTCATTCATCCTTTACTAT...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAAACCAGAAATACACCTaGATAAACAGGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGNQKYT*INRSES
Trigger: ACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTT...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCTGGGGTTCCAGAAACATCTaGGCCATGCGTAGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: LDWLHRTSHFFSLFMRTWGSRNI*AMRSPD
Trigger: GTCAGGGCTACGCATGGCTCAGATGTTTCTGGAACC...CCAGGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR GCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGGATGGCCTTTTAAAGTaGGGTACAGACGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGDGLLK*GTDGQQ
Trigger: CTGCTGGCCGTCTGTACCGCACTTTAAAAGGCCATC...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAACCGCTCCTGATGAGTaGTTTCCCCAAATGAAGCAA +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSTAPDE*FPQMKQ
Trigger: TTGCTTCATTTGGGGAAAGCACTCATCAGGAGCGGT...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGGGGAATCTGGTTGGTaGGCACAGGGTTGTCATATG +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLGESGW*AQGCHM
Trigger: CATATGACAACCCTGTGCGCACCAACCAGATTCCCC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCGATCCAGGAACACTGTaGCAGGAGTTACATTCCAAA +
Preference number: 4 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSDPGTL*QELHSK
Trigger: TTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATC...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGGCTCAGGGCCAGGCATaGGGTGCTGGAAGATCCTGG +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKAQGQA*GAGRSW
Trigger: CCAGGATCTTCCAGCACCCCATGCCTGGCCCTGAGC...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217315.9
CDS-3UTR CCA 90 bp TTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCTGGCACTGTCAGGGTCACTaGCTTGTTGGACTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LDWLHRTSHFFSLFMRTWHCQGH*LVGLAA
Trigger: TGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTG...CCAGGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGTGGGGTCAATTTCTTaGGGCGAGGAGTTGGTACCC +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAVGSIS*GEELVP
Trigger: GGGTACCAACTCCTCGCCCCAAGAAATTGACCCCAC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCACAGCTGATTCTCCTTaGTGGGGTCAATTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTATADSP*WGQFLG
Trigger: CCCAAGAAATTGACCCCACCAAGGAGAATCAGCTGT...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTCCTTTCTTCCACCGATaGCCTTTTAAAGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSPFFHR*PFKVRY
Trigger: GTACCGCACTTTAAAAGGCCATCGGTGGAAGAAAGG...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGAGCAAGCTTGGCCGTaGTCCACTCCAATCAGTCTA +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWEQAWP*STPISL
Trigger: TAGACTGATTGGAGTGGACCACGGCCAAGCTTGCTC...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGAGCAAGCTTGGCCGTaGTCCACTCCAATCAGTCTA +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLEQAWP*STPISL
Trigger: TAGACTGATTGGAGTGGACCACGGCCAAGCTTGCTC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGCAGTTAGTCATAGGGTaGCCAACAGCCCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGQLVIG*PTALRN
Trigger: GTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTG...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGATCCATTCCTGGGGATTaGGGAAAGAACGACAGAACT +
Preference number: 4 (lower is better)
Translates to: QPQDPGTLCQELHSKRAGSIPGD*GKNDRT
Trigger: AGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGA...TCCTGCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGACTTCTTGTCCATTCCTaGGGATTGGGGAAAGAACGA +
Preference number: 4 (lower is better)
Translates to: QPQDPGTLCQELHSKRAGLLVHS*GLGKER
Trigger: TCGTTCTTTCCCCAATCCCCAGGAATGGACAAGAAG...TCCTGCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGTCTTCTCGCTGTTCATaGGAACCTGGAAAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGSSRCS*EPGKGC
Trigger: ACACCCCTTTCCAGGTTCTCATGAACAGCGAGAAGA...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTAACCAGAAATACACCTaGATAAACAGGTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: TLAALAIPSQTQTSGCLANQKYT*INRSES
Trigger: ACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGCATCACCAGCATCCTaGGCTTTGTCTTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAASPAS*ALSCVG
Trigger: CCCAACACAAGACAAAGCTCAGGATGCTGGTGATGC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGCGCTGCAGTCACTGTaGGGCAAGATTGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWALQSL*GKIEKF
Trigger: GAATTTCTCAATCTTGCCTCACAGTGACTGCAGCGC...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTCTCTCCCAGATTCTCTaGCTTGTAGGTTATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ECLATYRRGSVISGPPCSLSQIL*LVGYLA
Trigger: AGCAAGATAACCTACAAGGCAGAGAATCTGGGAGAG...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCCGAACTCTTCTCATCTaGTTTGAGGTCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLRTLLI*FEVLQP
Trigger: AGGCTGGAGGACCTCAAAGCAGATGAGAAGAGTTCG...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGTACCCTCAGGCAGAGTaGACGAACTCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWYPQAE*TNSSHL
Trigger: CAGATGAGAAGAGTTCGTGCACTCTGCCTGAGGGTA...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACCGCTGCTCGGGGATCTaGCGGGGAATCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDRCSGI*RGIWLV
Trigger: CACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCG...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCTTTATTTTGCGTGCCTaGAGTCCCCCACGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSIFILRA*SPPRRV
Trigger: CACCCTGCGTGGGGGACTGCAGGCACGCAAAATAAA...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGCAAGGGTTAGCAGCTaGTACTTGAACCCTAATCCC +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLARVSS*YLNPNP
Trigger: GGGATTAGGGTTCAAGTAGCAGCTGCTAACCCTTGC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCATCTACGGGATCGTTCTaGTGGAAGTTGATAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTASTGSF*WKLIGA
Trigger: CGCGCCTATCAACTTCCACCAGAACGATCCCGTAGA...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGACAGCAGAGCCACCATaGTGGGAAAGGGCACCGCTC +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKTAEPP*WERAPL
Trigger: GAGCGGTGCCCTTTCCCACCATGGTGGCTCTGCTGT...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCACTGCATAGAAGCCGATaGTACCCGTTAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTALHRSR*YPLAAR
Trigger: TCTGGCTGCTAACGGGTACCATCGGCTTCTATGCAG...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGACCTCACTGAAGCTCTaGCGTGTCCTCTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGTSLKL*RVLFQL
Trigger: TAACTGGAAGAGGACACGCCAGAGCTTCAGTGAGGT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATCTGGAAACCCTGCCTTaGGCAGCCCTGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PNPWVDVVSCNLRANVCDLETLP*AALEEA
Trigger: AGCCTCCTCCAGGGCTGCCCAAGGCAGGGTTTCCAG...ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTGCAATTCCTGCTGTCTaGGGAACCTGGCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLAIPAV*GTWPPV
Trigger: TACTGGGGGCCAGGTTCCCCAGACAGCAGGAATTGC...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCTTCTCTTCTTCCTTGTaGTCCAGCAAACTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLFSSSL*SSKLRL
Trigger: CAGCCGGAGTTTGCTGGACCACAAGGAAGAAGAGAA...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp CAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCAGGAAGGTCCAGGGTTTCTTaGCACAAAAACAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: QPQDPGTLCQELHSKRAGRSRVS*HKNSSL
Trigger: CAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCT...TCCTGCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCCCTTCTTTCTAAGTTaGCTTCTTGTCCATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTAPFFLS*LLVHSW
Trigger: CCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGG...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCAATAGTAAAGGATGAATaGGAGGTGGTTGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSIVKDE*EVVVQV
Trigger: TACCTGCACAACCACCTCTCATTCATCCTTTACTAT...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp CCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGAACAGCTGAATGCCTaGGCCCAGCAGGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PNPWVDVVSCNLRANVCDEQLNA*AQQGAE
Trigger: CTCAGCTCCCTGCTGGGCTCAGGCATTCAGCTGTTC...ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCATCATACAGAACAGCTaGATGCCTGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSIIIQNS*MPEPSR
Trigger: CCTGCTGGGCTCAGGCATTCAGCTGTTCTGTATGAT...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACGGTGGCCAACAGCCCTaGGGAACTGAGGTGGAGACA +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDGGQQP*GTEVET
Trigger: TGTCTCCACCTCAGTTCCTCAGGGCTGTTGGCCACC...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACGCCACGAGTCGGCTCTaGTCCACTGTCAGGGTCACT +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDATSRL*STVRVT
Trigger: AGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGC...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCATACCCTCAGGCAGAGTaGACGAACTCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAYPQAE*TNSSHL
Trigger: CAGATGAGAAGAGTTCGTGCACTCTGCCTGAGGGTA...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGAAACAAAAACAGTTCACTaGAAGTCTCTTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPANSGCSEQGQFLLSGETKTVH*KSLLFF
Trigger: GAAGAAGAGAAGAGACTTGCAGTGAACTGTTTTTGT...TTCCCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCTGGCAGTAGATGAAACATCTGAGCCATaGGTAGCCCTGACGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAQNFTLLLAVHENLAVDETSEP*VALTEK
Trigger: CTTCTCCGTCAGGGCTACGCATGGCTCAGATGTTTC...ATCTACTGCCAGGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450829.5
CDS-3UTR CCA 90 bp GCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCTGGAAAGGGGTGTTTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AQNFTLLLAVHENLERGVCRLSC*AGRRAV
Trigger: CACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACA...AACACCCCTTTCCAGGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442842.5
CDS-3UTR CCA 90 bp TCAGGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCCTGTTCATGAGAACCTaGAAAGGGGTGTTGACAATC +
Preference number: 4 (lower is better)
Translates to: SGSLACWTGCTELHTSSRLFMRT*KGVLTI
Trigger: GATTGTCAACACCCCTTTCCAGGTTCTCATGAACAG...GCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442842.5
CDS-3UTR CCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCATCCTCTGCACACAGCTaGAAGTACACCATGACGATG +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTASSAHS*KYTMTM
Trigger: CATCGTCATGGTGTACTTCCAGCTGTGTGCAGAGGA...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGACAAGTGGATGCTTaGCTTGGGAAATACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCRQVDA*LGKYLA
Trigger: GGCCAAGTATTTCCCAAGCCAAGCATCCACTTGTCT...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCTCCATTCCTGGGGATTaGGGAAAGAACGACAGAACT +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLSIPGD*GKNDRT
Trigger: AGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGA...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGTTGGTGGATGCCGCTTaGCGCTGCAGTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKLVDAA*RCSHCE
Trigger: CTCACAGTGACTGCAGCGCCAAGCGGCATCCACCAA...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGAGAGGAGAGAGGGGATaGACTCCACGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKRGERG*TPRCPA
Trigger: AGCTGGACATCGTGGAGTTCATCCCCTCTCTCCTCT...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCCCTTTTCTCCAACTTaGTGCTTGGTGGATGCCGCT +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLPFSPT*CLVDAA
Trigger: AGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLPCRLS*WAGRRA
Trigger: TGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGCTTGTTGGACTGGCTaGACAGAACTTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAACWTG*TELHTS
Trigger: AGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACCTGAAGACGTCGCCGTaGACCAACTTCCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDLKTSP*TNFHPD
Trigger: GTCTGGGTGGAAGTTGGTGCACGGCGACGTCTTCAG...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGAACAAACATGTAGGCTaGATAGAAGCCGATGGTACC +
Preference number: 4 (lower is better)
Translates to: PRETLLSKLASCPFLGIGNKHVG*IEADGT
Trigger: GGTACCATCGGCTTCTATGCAGCCTACATGTTTGTT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAATATCGCTCTCTACTaGTTGGGTTCCCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCNIALY*LGSLFS
Trigger: GGAGAAAAGGGAACCCAAGCAGTAGAGAGCGATATT...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCGAAAACCAGTGGATCTaGACGTCACTCATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSIENQWI*TSLMVR
Trigger: CCTGACCATGAGTGACGTCCAGATCCACTGGTTTTC...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCACCTCACTGAAGCTCTaGCGTGTCCTCTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSITSLKL*RVLFQL
Trigger: TAACTGGAAGAGGACACGCCAGAGCTTCAGTGAGGT...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCAGGTCCAGGGTTTCTTaGCACAAAAACAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLRSRVS*HKNSSL
Trigger: CAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCT...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACTTGGTGGATGCCGCTTaGCGCTGCAGTCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDLVDAA*RCSHCE
Trigger: CTCACAGTGACTGCAGCGCCAAGCGGCATCCACCAA...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGATGATAGTAAAGGATaGATGAGAGGTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLDDSKG*MRGGCA
Trigger: TGCACAACCACCTCTCATTCATCCTTTACTATCATC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCGACGATGCTGATTTGTaGACAGGATACCACCAGGAT +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSIDDADL*TGYHQD
Trigger: ATCCTGGTGGTATCCTGTTCACAAATCAGCATCGTC...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKPCRLS*WAGRRA
Trigger: TGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGG...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCACCGCTCCTGATGAGTaGTTTCCCCAAATGAAGCAA +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSITAPDE*FPQMKQ
Trigger: TTGCTTCATTTGGGGAAAGCACTCATCAGGAGCGGT...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCACAGGGTTGTCATATaGCTGCTTTCGGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLHRVVI*LLSEAE
Trigger: TTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAACCCTTATCTCGGTaGATTTATCCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCKPLSR*IYPSWI
Trigger: GATCCAGGATGGATAAATCCACCGAGATAAGGGTTT...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTGATGACATGCACGGGTaGGCAGAGGTTGAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLDDMHG*AEVEKN
Trigger: GTTCTTTTCAACCTCTGCCCACCCGTGCATGTCATC...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGATGATAGTAAAGGATaGATGAGAGGTGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTADDSKG*MRGGCA
Trigger: TGCACAACCACCTCTCATTCATCCTTTACTATCATC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCCAAACCAGAAATACACCTGAATAAACAGGTCAGAGAGTTCCTGTTGGAGGGACATGCTCAGGATACCTaGCAGGAAGAAGACCACAAC +
Preference number: 4 (lower is better)
Translates to: SKPEIHLNKQVREFLLEGHAQDT*QEEDHN
Trigger: GTTGTGGTCTTCTTCCTGTCAGGTATCCTGAGCATG...TCCCTCCAACAGGAACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACGCATCACCAGCATCCTaGGCTTTGTCTTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDASPAS*ALSCVG
Trigger: CCCAACACAAGACAAAGCTCAGGATGCTGGTGATGC...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCCTTTCTTCCACCGATaGCCTTTTAAAGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLPFFHR*PFKVRY
Trigger: GTACCGCACTTTAAAAGGCCATCGGTGGAAGAAAGG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACAGCGAGAGGCCCATTTaGTATCACTTTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDSERPI*YHFPPS
Trigger: ACTGGGAGGAAAGTGATATCAAATGGGCCTCTCGCT...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCAGCAGCATAGATCTTaGGAACAAACATGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLQQHRS*EQTCRL
Trigger: CAGCCTACATGTTTGTTCGCAAGATCTATGCTGCTG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGACCCAGACTCCTCCATaGTGTCTTCAATGTCATCCT +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKTQTPP*CLQCHP
Trigger: AGGATGACATTGAAGACACCATGGAGGAGTCTGGGT...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACAGTGGACAGAGTAGGTaGAGTACAGCTGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDSGQSR*STADSP
Trigger: AGGAGAATCAGCTGTACTTCACCTACTCTGTCCACT...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCACTGTGAGGCAAGATTaGGAAATTCACTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSITVRQD*EIHWFD
Trigger: ATCAAACCAGTGAATTTCTCAATCTTGCCTCACAGT...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CCA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGCTGTTCATGAGAACCTaGAAAGGGGTGTTGACAATC +
Preference number: 4 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKLFMRT*KGVLTI
Trigger: GATTGTCAACACCCCTTTCCAGGTTCTCATGAACAG...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
3UTR CAA 72 bp TTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATaGGGGAAAGAACGACAGAACTTACCTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: FFLSWLLVHSWG*GKERQNLPSIF
Trigger: GAAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR GCA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCACAAAAACAGTTCACTaGAAGTCTCTTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTEVETVTKTLISVDLSITKTVH*KSLLFF
Trigger: GAAGAAGAGAAGAGACTTGCAGTGAACTGTTTTTGT...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp CCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATAGTGCTTTCCCCAAATaGAGCAATTCAATACGAAGC +
Preference number: 4 (lower is better)
Translates to: PNPWVDVVSCNLRANVCDSAFPK*SNSIRS
Trigger: GCTTCGTATTGAATTGCTTCATTTGGGGAAAGCACT...ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR TCA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTAAAATTGATGATCTTTaGACCCTTTATGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SCPFLGIGERTTELTFHLKIDDL*TLYEVS
Trigger: GGACACCTCATAAAGGGTTCAAAGATCATCAATTTT...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCGCTGGAAACCCTGCCTaGGGCAGCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASAGNPA*GSPGGG
Trigger: GCCTCCTCCAGGGCTGCCCAAGGCAGGGTTTCCAGC...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGGGTGGGGTCAATTTCTaGGGGCGAGGAGTTGGTACC +
Preference number: 5 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPGGVNF*GRGVGT
Trigger: GGTACCAACTCCTCGCCCCAAGAAATTGACCCCACC...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAGCTGGAAACCCTGCCTaGGGCAGCCCTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGAGNPA*GSPGGG
Trigger: GCCTCCTCCAGGGCTGCCCAAGGCAGGGTTTCCAGC...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGTTGGTGCGCACAGGGTaGTCATATGGCTGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPLVRTG*SYGCFR
Trigger: CCGAAAGCAGCCATATGACAACCCTGTGCGCACCAA...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGGAGCTTTGTCTTGTGTaGGGAGTCCCACAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKELCLV*GVPQGL
Trigger: CAGCCCTTGTGGGACTCCCAACACAAGACAAAGCTC...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGATCGCCGTCGCCATCTaGGATCCACGTGTCGCCGTA +
Preference number: 5 (lower is better)
Translates to: SARPRVGSAPLSGSLACWIAVAI*DPRVAV
Trigger: TACGGCGACACGTGGATCCAAGATGGCGACGGCGAT...CCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442842.5
CDS CCA 90 bp CTGCTCCCCTTCCCCTGGCACACCAACCTGTCACAAGGGCAGGAGTaGACACATCATCATGACACCATCAGGGCCCGTGGGCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: LLPFPWHTNLSQGQE*THHHDTIRARGPGM
Trigger: CATGCCAGGCCCACGGGCCCTGATGGTGTCATGATGATGTGTCCACTCCTGCCCTTGTGACAGGTTGGTGTGCCAGGGGAAGGGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS-3UTR CAA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCTCTTCTCATCTGCTTaGAGGTCCTCCAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPLFSSA*RSSSLM
Trigger: CATCAGGCTGGAGGACCTCAAAGCAGATGAGAAGAG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGCAGCGAGAGGCCCATTaGATATCACTTTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CSPPRRVASCPRTEQAWPQREAH*ISLSSQ
Trigger: CTGGGAGGAAAGTGATATCAAATGGGCCTCTCGCTG...CGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AAAGAGAGGTCTGGCAGAGGCTGGCTGGCACTGAGGGTGCTGTCCGAGCTGGAGGTCAGGGTCACTGGCTaGTTGGACTGGCTGCACAGA +
Preference number: 5 (lower is better)
Translates to: KERSGRGWLALRVLSELEVRVTG*LDWLHR
Trigger: TCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGAC...CTCCAGCTCGGACAGCACCCTCAGTGCCAGCCAGCCTCTGCCAGACCTCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTAGGACCCTAGCGGCCTaGGCCATCCCTTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: TLAALAIPSQTQTSGCLARTLAA*AIPSQT
Trigger: TGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCT...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCGAGAAATTCACTGGTTaGATGGGTGAGGCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: ACLQSPTQGGFLSEDGASEKFTG*MGEAGR
Trigger: TCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC...GCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGAATCGCCGTCGCCATCTaGGATCCACGTGTCGCCGTA +
Preference number: 5 (lower is better)
Translates to: GVRTLAALAIPSQTQTSGIAVAI*DPRVAV
Trigger: TACGGCGACACGTGGATCCAAGATGGCGACGGCGAT...TCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398022.7
CDS GCA 90 bp AGTAGTAGCCCAAGTAGACGAGGGGCAGGGAGATCCCGAACCACATaGACAGCAGAGCCACCATGGTGGGAAAGGGCACCGCTCCTGATG +
Preference number: 5 (lower is better)
Translates to: SSSPSRRGAGRSRTT*TAEPPWWERAPLLM
Trigger: CATCAGGAGCGGTGCCCTTTCCCACCATGGTGGCTCTGCTGTGCATGTGGTTCGGGATCTCCCTGCCCCTCGTCTACTTGGGCTACTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 90 bp ATCCCAGCCATGAGGATGCCCACAAATCGGTTCATGTACCACCGCTaGTCGGGGATCTGCCGGGGAATCTGGTTGGTGCGCACAGGGTTG +
Preference number: 5 (lower is better)
Translates to: IPAMRMPTNRFMYHR*SGICRGIWLVRTGL
Trigger: CAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACCGATTTGTGGGCATCCTCATGGCTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GTGCTGTCCGAGCTGGAGCTGTGCTTTGTCGTGGCCTCAGTGGTGAGGATGGGCCACCAGGGTACAGAGTaGCCGTACAGAAGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: VLSELELCFVVASVVRMGHQGTE*PYRRLL
Trigger: AAGGAGCCTTCTGTACGGCAACTCTGTACCCTGGTG...GCCCATCCTCACCACTGAGGCCACGACAAAGCACAGCTCCAGCTCGGACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TGCGTGCCTGCAGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGGTCAGAGAGTTCCTGTaGGAGGGAACTTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: CVPAVPHAGWLPVRGRSKVREFL*EGTFLA
Trigger: TGCTAAGAAAGTTCCCTCCAACAGGAACTCTCTGAC...CTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACTGCAGGCACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCTGTGATCCGCTCGGCCACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCAGCCCTTTCAGGGGCTaGCTCAAGAACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SVIRSATSRLCSTVRVTGSPFRG*LKNQFS
Trigger: AGAGAACTGGTTCTTGAGCAAGCCCCTGAAAGGGCT...GCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGTGGCCGAGCGGATCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS GCA 90 bp AGGATGCCCACAAATCGGTTCATGTACCACCGCTGCTCGGGGATCTaGCGGGGAATCTGGTTGGTGCGCACAGGGTTGTCATATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RMPTNRFMYHRCSGI*RGIWLVRTGLSYGC
Trigger: GCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACCGATTTGTGGGCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp GGGGATCTGCCGGGGAATCTGGTTGGTGCGCACAGGGTTGTCATATaGCTGCTTTCGGAAGCCGAAGTAGTAGCCCAAGTAGACGAGGGG +
Preference number: 5 (lower is better)
Translates to: GDLPGNLVGAHRVVI*LLSEAEVVAQVDEG
Trigger: CCCCTCGTCTACTTGGGCTACTACTTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp GGTTCATGTACCACCGCTGCTCGGGGATCTGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCATATGGCTGCTTTCGGAAGCCGAAGT +
Preference number: 5 (lower is better)
Translates to: GSCTTAARGSAGESG*CAQGCHMAAFGSRS
Trigger: ACTTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp AATCGGTTCATGTACCACCGCTGCTCGGGGATCTGCCGGGGAATCTaGTTGGTGCGCACAGGGTTGTCATATGGCTGCTTTCGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: NRFMYHRCSGICRGI*LVRTGLSYGCFRKP
Trigger: CGGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACCGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp AGTCCCCCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTaGCCGTGGTCCACTCCAATCAGTCTATCTTCACAGCAGCATAGA +
Preference number: 5 (lower is better)
Translates to: SPPRRVASCPRTEQA*PWSTPISLSSQQHR
Trigger: TCTATGCTGCTGTGAAGATAGACTGATTGGAGTGGACCACGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGGGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS CCA 90 bp AACAGAGGGGGCTTCCCTGGGAAGTGCACATGGGCTTTGGTACCATaGGCAGCCAACACCTCCTCTGACCCTTCTCCCAGGCAAACCTGT +
Preference number: 5 (lower is better)
Translates to: NRGGFPGKCTWALVP*AANTSSDPSPRQTC
Trigger: ACAGGTTTGCCTGGGAGAAGGGTCAGAGGAGGTGTTGGCTGCCCATGGTACCAAAGCCCATGTGCACTTCCCAGGGAAGCCCCCTCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 90 bp ACAGATGAAACAGAGGGGGCTTCCCTGGGAAGTGCACATGGGCTTTaGTACCATGGGCAGCCAACACCTCCTCTGACCCTTCTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: TDETEGASLGSAHGL*YHGQPTPPLTLLPG
Trigger: GCCTGGGAGAAGGGTCAGAGGAGGTGTTGGCTGCCCATGGTACCAAAGCCCATGTGCACTTCCCAGGGAAGCCCCCTCTGTTTCATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 90 bp GGTGACTGGCCCAGAGTCACACAGATGAAACAGAGGGGGCTTCCCTaGGAAGTGCACATGGGCTTTGGTACCATGGGCAGCCAACACCTC +
Preference number: 5 (lower is better)
Translates to: GDWPRVTQMKQRGLP*EVHMGFGTMGSQHL
Trigger: GAGGTGTTGGCTGCCCATGGTACCAAAGCCCATGTGCACTTCCCAGGGAAGCCCCCTCTGTTTCATCTGTGTGACTCTGGGCCAGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS GCA 90 bp TCATGTACCACCGCTGCTCGGGGATCTGCCGGGGAATCTGGTTGGTaGGCACAGGGTTGTCATATGGCTGCTTTCGGAAGCCGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: SCTTAARGSAGESGW*AQGCHMAAFGSRSS
Trigger: ACTACTTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp CCACGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGTaGTCCACTCCAATCAGTCTATCTTCACAGCAGCATAGATCTTGC +
Preference number: 5 (lower is better)
Translates to: PRRVASCPRTEQAWP*STPISLSSQQHRSC
Trigger: GCAAGATCTATGCTGCTGTGAAGATAGACTGATTGGAGTGGACCACGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS-3UTR CAA 90 bp TGGGGAGTGATCCTGAGGGGTAAGGACCCTAGCGGCCTTGGCCATCCCTTCCCAGCACATAGAAGGCGCTaGTTTCACACATCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: WGVILRGKDPSGLGHPFPAHRRR*FHTSGR
Trigger: TCTCCCTGATGTGTGAAACAAGCGCCTTCTATGTGC...TGGGAAGGGATGGCCAAGGCCGCTAGGGTCCTTACCCCTCAGGATCACTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AGCAATGAGGTGGACGTAGTAGTCTTCTGTGATCCGCTCGGCCACGAGTCGGCTGTCAGGGTCACTGGCTaGTTGGACTGGCTGCACAGA +
Preference number: 5 (lower is better)
Translates to: SNEVDVVVFCDPLGHESAVRVTG*LDWLHR
Trigger: TCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGAC...AGCCGACTCGTGGCCGAGCGGATCACAGAAGACTACTACGTCCACCTCATTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CAA 90 bp GGTTCCCTTTTCTCCAACTTGATGCTTGGTGGATGCCGCTTGGCGCTGCAGTCATGCCGGGGAATCTGGTaGGTGCGCACAGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GSLFSNLMLGGCRLALQSCRGIW*VRTGLS
Trigger: TGACAACCCTGTGCGCACCAACCAGATTCCCCGGCA...TGACTGCAGCGCCAAGCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTGAGCTTTGTCTTGTGTaGGGAGTCCCACAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TLAALAIPSQTQTSGCLAELCLV*GVPQGL
Trigger: CAGCCCTTGTGGGACTCCCAACACAAGACAAAGCTC...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS TCA 90 bp ATCTGTGCTGGGCCCCGAGCTGGGTCAGCCACACTTACATGCCTCTaGAGGGCCTTCCTACCAACTTTCATCTTGGCACTCTTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ICAGPRAGSATLTCL*RAFLPTFILALFGR
Trigger: CCTCCCAAAGAGTGCCAAGATGAAAGTTGGTAGGAAGGCCCTTCAGAGGCATGTAAGTGTGGCTGACCCAGCTCGGGGCCCAGCACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 90 bp CTGGGCCACTACTCTGGAATAGCAGATACATGTCCGGTACTGACTTaGTACAAGGTACCATCTGTGCTGGGCCCCGAGCTGGGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: LGHYSGIADTCPVLT*YKVPSVLGPELGQP
Trigger: TGGCTGACCCAGCTCGGGGCCCAGCACAGATGGTACCTTGTACCAAGTCAGTACCGGACATGTATCTGCTATTCCAGAGTAGTGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS-3UTR CAA 90 bp ACGAGTCGGCTCTGCTCCACTGTCAGGGTCACTGGCTTGTTGGACTGGCTGCACGCACATAGAAGGCGCTaGTTTCACACATCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: TSRLCSTVRVTGLLDWLHAHRRR*FHTSGR
Trigger: TCTCCCTGATGTGTGAAACAAGCGCCTTCTATGTGC...GTGCAGCCAGTCCAACAAGCCAGTGACCCTGACAGTGGAGCAGAGCCGACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CAA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGCAGCGAGAGGCCCATTaGATATCACTTTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGQREAH*ISLSSQ
Trigger: CTGGGAGGAAAGTGATATCAAATGGGCCTCTCGCTG...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTCTCACAAGCAGTGTTTaGGGTGTCCCCAAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TLAALAIPSQTQTSGCLALTSSV*GVPKRR
Trigger: CCTCCTTTTGGGGACACCCAAAACACTGCTTGTGAG...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS TCA 90 bp GCTTGGCCTGGTAGAGCTAAGAAAGTCAAGGATCAGAGACGCTGGTaGCTGGCCCAGAGTCACACAGATGAAACAGAGGGGGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AWPGRAKKVKDQRRW*LAQSHTDETEGASL
Trigger: CAGGGAAGCCCCCTCTGTTTCATCTGTGTGACTCTGGGCCAGTCACCAGCGTCTCTGATCCTTGACTTTCTTAGCTCTACCAGGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 90 bp GGCCTGGTAGAGCTAAGAAAGTCAAGGATCAGAGACGCTGGTGACTaGCCCAGAGTCACACAGATGAAACAGAGGGGGCTTCCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GLVELRKSRIRDAGD*PRVTQMKQRGLPWE
Trigger: TTCCCAGGGAAGCCCCCTCTGTTTCATCTGTGTGACTCTGGGCCAGTCACCAGCGTCTCTGATCCTTGACTTTCTTAGCTCTACCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 90 bp CAGGAAGCCAAAGAGGTAATAGAACTGATTCTCCCAGATAGCCTGTaGACACACAGTGGGGCTTCAGCTGGCTTGACCACCCTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: QEAKEVIELILPDSL*THSGASAGLTTLLP
Trigger: GGGGAGCAGGGTGGTCAAGCCAGCTGAAGCCCCACTGTGTGTCCACAGGCTATCTGGGAGAATCAGTTCTATTACCTCTTTGGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS-3UTR CAA 90 bp TGTGGTCCAGCAAACTCCGGCTGCTCTGAACAGGGGCAATTCCTGCTGTCTGGGGCACATAGAAGGCGCTaGTTTCACACATCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: CGPANSGCSEQGQFLLSGAHRRR*FHTSGR
Trigger: TCTCCCTGATGTGTGAAACAAGCGCCTTCTATGTGC...CCCAGACAGCAGGAATTGCCCCTGTTCAGAGCAGCCGGAGTTTGCTGGACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCTCGTTCTGGTGGAAGTaGATAGGCGCGACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCSFWWK*IGATPG
Trigger: GCCTGGGGTCGCGCCTATCAACTTCCACCAGAACGA...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACCCTAGCGGCCTTGGCCATCCCTTCCCAGACACAGACAAGTGGATGCTTGGCTGTGAGCTTCACAGCCTaGATTTCTACGGGATCGTTC +
Preference number: 5 (lower is better)
Translates to: TLAALAIPSQTQTSGCLAVSFTA*ISTGSF
Trigger: GAACGATCCCGTAGAAATCAAGGCTGTGAAGCTCAC...AGCCAAGCATCCACTTGTCTGTGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCTGGCTTGGGAAATACTaGGCCCCAGGTCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTAWLGKY*APGPGF
Trigger: AAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCA...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCCTCACAAGCAGTGTTTaGGGTGTCCCCAAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSLTSSV*GVPKRR
Trigger: CCTCCTTTTGGGGACACCCAAAACACTGCTTGTGAG...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTACGGGTGGGCAGAGGTaGAAAAGAACAGGGGTCTAC +
Preference number: 5 (lower is better)
Translates to: ECLATYRRGSVISGPPCSTGGQR*KRTGVY
Trigger: GTAGACCCCTGTTCTTTTCAACCTCTGCCCACCCGT...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp TGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCTaGAAAGGGGTGTTGACAATCCGGTCCCCTCTCAGCACCTCTCCC +
Preference number: 5 (lower is better)
Translates to: WLHRTSHFFSLFMRT*KGVLTIRSPLSTSP
Trigger: GGGAGAGGTGCTGAGAGGGGACCGGATTGTCAACACCCCTTTCCAGGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp CCAGGGTACAGAGTTGCCGTACAGAAGGCTCCTTTCTTCCACCGATaGCCTTTTAAAGTGCGGTACAGACGGCCAGCAGAAAATCCGCCA +
Preference number: 5 (lower is better)
Translates to: PGYRVAVQKAPFFHR*PFKVRYRRPAENPP
Trigger: TGGCGGATTTTCTGCTGGCCGTCTGTACCGCACTTTAAAAGGCCATCGGTGGAAGAAAGGAGCCTTCTGTACGGCAACTCTGTACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GAGAAATTCACTGGTTTGATGGGTGAGGCTGGTAGAGCCACTGGGAGAATGTGGGTCAGGGTCACTGGCTaGTTGGACTGGCTGCACAGA +
Preference number: 5 (lower is better)
Translates to: EKFTGLMGEAGRATGRMWVRVTG*LDWLHR
Trigger: TCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGAC...CCACATTCTCCCAGTGGCTCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCGTCCATTCCTGGGGATaGGGGAAAGAACGACAGAAC +
Preference number: 5 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTAVHSWG*GKERQN
Trigger: GTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGAC...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GAATGCCTGGCCACTTACAGGAGGGGATCTGTAATCTCTGGGCCTCCCTGTTCTGTTAGCAGCTGCTACTaGAACCCTAATCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ECLATYRRGSVISGPPCSVSSCY*NPNPWV
Trigger: CACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAAC...AGAACAGGGAGGCCCAGAGATTACAGATCCCCTCCTGTAAGTGGCCAGGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCACTGAAGCTCTGGCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCTCCCTTTTCTCCAACTaGATGCTTGGTGGATGCCGC +
Preference number: 5 (lower is better)
Translates to: SLKLWRVLFQLVIGWPTASLFSN*MLGGCR
Trigger: GCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGA...GGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGCCAGAGCTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCATCGCTCTCTACTGCTaGGGTTCCCTTTTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSIALYC*GSLFSN
Trigger: GTTGGAGAAAAGGGAACCCAAGCAGTAGAGAGCGAT...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp CAAACTGCACATCTTTTTCCTTCTTCTTGTCATCGCTGTCTCGGTTaGAGTAGAGCTCCAGCCGGGTGGCCACAGGCAGGTTGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: QTAHLFPSSCHRCLG*SRAPAGWPQAGCQQ
Trigger: TTGCTGACAACCTGCCTGTGGCCACCCGGCTGGAGCTCTACTCCAACCGAGACAGCGATGACAAGAAGAAGGAAAAAGATGTGCAGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAGGTGGGGTCAATTTCTaGGGGCGAGGAGTTGGTACC +
Preference number: 5 (lower is better)
Translates to: GNTWPQVQGFLAQKQFTAGGVNF*GRGVGT
Trigger: GGTACCAACTCCTCGCCCCAAGAAATTGACCCCACC...TGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCTTGGTGCGCACAGGGTaGTCATATGGCTGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCLVRTG*SYGCFR
Trigger: CCGAAAGCAGCCATATGACAACCCTGTGCGCACCAA...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCTGGCTTGGGAAATACTaGGCCCCAGGTCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLWLGKY*APGPGF
Trigger: AAACCCTGGACCTGGGGCCAAGTATTTCCCAAGCCA...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCACGGGTGGGCAGAGGTaGAAAAGAACAGGGGTCTAC +
Preference number: 5 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCTGGQR*KRTGVY
Trigger: GTAGACCCCTGTTCTTTTCAACCTCTGCCCACCCGT...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGTCACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTGTGAGCTTCACAGCCTaGATTTCTACGGGATCGTTC +
Preference number: 5 (lower is better)
Translates to: GSLACWTGCTELHTSSRCVSFTA*ISTGSF
Trigger: GAACGATCCCGTAGAAATCAAGGCTGTGAAGCTCAC...ACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CAA 90 bp TTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCGTCAGGGTCACTGGCTaGTTGGACTGGCTGCACAGA +
Preference number: 5 (lower is better)
Translates to: LLDWLHRTSHFFSLFMRTVRVTG*LDWLHR
Trigger: TCTGTGCAGCCAGTCCAACAAGCCAGTGACCCTGAC...GGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CAA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCTCTTTTTCCTTCTTCTaGTCATCGCTGTCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSSFSFF*SSLSRL
Trigger: CAACCGAGACAGCGATGACAAGAAGAAGGAAAAAGA...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGAAGTGGATGCTTGGCTaGGGAAATACTTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PRETLLSKLASCPFLGIGKWMLG*GNTWPQ
Trigger: CTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTT...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGAGGACCCTAGCGGCCTaGGCCATCCCTTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKRTLAA*AIPSQT
Trigger: TGTCTGGGAAGGGATGGCCAAGGCCGCTAGGGTCCT...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCGTCCATTCCTGGGGATaGGGGAAAGAACGACAGAAC +
Preference number: 5 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCVHSWG*GKERQN
Trigger: GTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGAC...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGACCCTTCTTTCTAAGTaGGCTTCTTGTCCATTCCTG +
Preference number: 5 (lower is better)
Translates to: ACPLPVSHRVANSPEELRTLLSK*ASCPFL
Trigger: CAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGT...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CACGCAGCCCCAGGATCCAGGAACACTGTGCCAGGAGTTACATTCCAAACGAGCACCCTTCTTTCTAAGTaGGCTTCTTGTCCATTCCTG +
Preference number: 5 (lower is better)
Translates to: HAAPGSRNTVPGVTFQTSTLLSK*ASCPFL
Trigger: CAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGT...GCTCGTTTGGAATGTAACTCCTGGCACAGTGTTCCTGGATCCTGGGGCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CCACGTGAGACCCTTCTTTCTAAGTTGGCTTCTTGTCCATTCCTGGGGATTGGGTCCCTTTTCTCCAACTaGATGCTTGGTGGATGCCGC +
Preference number: 5 (lower is better)
Translates to: PRETLLSKLASCPFLGIGSLFSN*MLGGCR
Trigger: GCGGCATCCACCAAGCATCAAGTTGGAGAAAAGGGA...CCCAATCCCCAGGAATGGACAAGAAGCCAACTTAGAAAGAAGGGTCTCACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 90 bp CCCCTCTCAGCACCTCTCCCAGATTCTCTGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: PLSAPLPDSLPCRLS*WAGRRAVNSIHKVA
Trigger: AGCTACCTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAGAGGTGCTGAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp CTCTCAGCACCTCTCCCAGATTCTCTGCCTTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAGGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSAPLPDSLPCRLSC*AGRRAVNSIHKVAG
Trigger: CCCAGCTACCTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAGAGGTGCTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCCAAACCAGAAATACACCTGAATAAACAGGTCAGAGAGTTCCTGTTGGAGGGATCTTGGGGCGAGGAGTaGGTACCCTCAGGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SKPEIHLNKQVREFLLEGSWGEE*VPSGRV
Trigger: CACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAGA...TCCCTCCAACAGGAACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGAACTGAGGTGGAGACAGTGACCAAAACCCTTATCTCGGTGGATTTATCCATCCACCAGGGTACAGAGTaGCCGTACAGAAGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: GTEVETVTKTLISVDLSIHQGTE*PYRRLL
Trigger: AAGGAGCCTTCTGTACGGCAACTCTGTACCCTGGTG...GATGGATAAATCCACCGAGATAAGGGTTTTGGTCACTGTCTCCACCTCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CACTGGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGCACATAGAAGGCGCTaGTTTCACACATCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: HWLVGLAAQNFTLLLAVHAHRRR*FHTSGR
Trigger: TCTCCCTGATGTGTGAAACAAGCGCCTTCTATGTGC...ATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CAA 90 bp GGCTTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAGTGAGCTTCACAGCCTaGATTTCTACGGGATCGTTC +
Preference number: 5 (lower is better)
Translates to: GLLDWLHRTSHFFSLFMRVSFTA*ISTGSF
Trigger: GAACGATCCCGTAGAAATCAAGGCTGTGAAGCTCAC...TCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS-3UTR CAA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACTGCCGGGGAATCTGGTaGGTGCGCACAGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDCRGIW*VRTGLS
Trigger: TGACAACCCTGTGCGCACCAACCAGATTCCCCGGCA...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCGTCAGAGAGTTCCTGTaGGAGGGAACTTTCTTAGCA +
Preference number: 5 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLVREFL*EGTFLA
Trigger: TGCTAAGAAAGTTCCCTCCAACAGGAACTCTCTGAC...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp GGGAAATACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCGAGAAATTCACTGGTTaGATGGGTGAGGCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: GKYLAPGPGFLGTKTVHCEKFTG*MGEAGR
Trigger: TCTACCAGCCTCACCCATCAAACCAGTGAATTTCTC...GCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGTATTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TTGTTGGACTGGCTGCACAGAACTTCACACTTCTTCTCGCTGTTCATGAGAACCAGCCCTTTCAGGGGCTaGCTCAAGAACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LLDWLHRTSHFFSLFMRTSPFRG*LKNQFS
Trigger: AGAGAACTGGTTCTTGAGCAAGCCCCTGAAAGGGCT...GGTTCTCATGAACAGCGAGAAGAAGTGTGAAGTTCTGTGCAGCCAGTCCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS TCA 90 bp CTCCTGGTCCTCTTCCATGTCCTCCCGATGATAGTAAAGGATGAATaGGAGGTGGTTGTGCAGGTAGATCTTGTTGACATCTGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LLVLFHVLPMIVKDE*EVVVQVDLVDICEA
Trigger: GGCTTCACAGATGTCAACAAGATCTACCTGCACAACCACCTCTCATTCATCCTTTACTATCATCGGGAGGACATGGAAGAGGACCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 90 bp CCGTGGTCCACTCCAATCAGTCTATCTTCACAGCAGCATAGATCTTaGGAACAAACATGTAGGCTGCATAGAAGCCGATGGTACCCGTTA +
Preference number: 5 (lower is better)
Translates to: PWSTPISLSSQQHRS*EQTCRLHRSRWYPL
Trigger: TAACGGGTACCATCGGCTTCTATGCAGCCTACATGTTTGTTCGCAAGATCTATGCTGCTGTGAAGATAGACTGATTGGAGTGGACCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS CCA 90 bp GCTGTTCATGAGAACCCAGATTCTCTGCCTTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAGGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: AVHENPDSLPCRLSC*AGRRAVNSIHKVAG
Trigger: CCCAGCTACCTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGTTCTCATGAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417389.1
CDS-3UTR CAA 90 bp GCGTGTCCTCTTCCAGTTAGTCATAGGGTGGCCAACAGCCCTGAGGAACTGAGGCCATCCTGGATCCATTaGTTAAAACAAAGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: ACPLPVSHRVANSPEELRPSWIH*LKQRRK
Trigger: TTTCCTTCTTTGTTTTAACAAATGGATCCAGGATGG...CCTCAGTTCCTCAGGGCTGTTGGCCACCCTATGACTAACTGGAAGAGGACACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS TCA 90 bp ATCCTCTGCACACAGCTGGAAGTACACCATGACGATGCTGATTTGTaGACAGGATACCACCAGGATGATGAAAACAAGGAACAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: ILCTQLEVHHDDADL*TGYHQDDENKEQEA
Trigger: GGCTTCCTGTTCCTTGTTTTCATCATCCTGGTGGTATCCTGTTCACAAATCAGCATCGTCATGGTGTACTTCCAGCTGTGTGCAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000495749.1
CDS GCA 90 bp CTCGCTGTTCATGAGAACCCAGATTCTCTGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: LAVHENPDSLPCRLS*WAGRRAVNSIHKVA
Trigger: AGCTACCTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGTTCTCATGAACAGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417389.1
CDS GCA 90 bp CACCACCACTTGAGCAGCTTACCAAGCGCTAGGCCTTATGCCACATaGCTCATATACAATTGCTACATGTGTGTGTCTATGAAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: HHHLSSLPSARPYAT*LIYNCYMCVSMKAW
Trigger: CCAAGCTTTCATAGACACACACATGTAGCAATTGTATATGAGGCATGTGGCATAAGGCCTAGCGCTTGGTAAGCTGCTCAAGTGGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS-3UTR CAA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGCTCTTCTCATCTGCTTaGAGGTCCTCCAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKLFSSA*RSSSLM
Trigger: CATCAGGCTGGAGGACCTCAAAGCAGATGAGAAGAG...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTATCCTGAGCTTTGTCTaGTGTTGGGAGTCCCACAAG +
Preference number: 5 (lower is better)
Translates to: SCPFLGIGERTTELTFHLILSFV*CWESHK
Trigger: CTTGTGGGACTCCCAACACAAGACAAAGCTCAGGAT...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 90 bp ATGCCTCTGAAGGGCCTTCCTACCAACTTTCATCTTGGCACTCTTTaGGAGGAGTCATCATCACCATTACAACAGCATTTCCTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: MPLKGLPTNFHLGTL*EESSSPLQQHFLKS
Trigger: TGACTTCAGGAAATGCTGTTGTAATGGTGATGATGACTCCTCCCAAAGAGTGCCAAGATGAAAGTTGGTAGGAAGGCCCTTCAGAGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS-3UTR CAA 90 bp TCCAAACCAGAAATACACCTGAATAAACAGGTCAGAGAGTTCCTGTTGGAGGGAGTGAGCTTCACAGCCTaGATTTCTACGGGATCGTTC +
Preference number: 5 (lower is better)
Translates to: SKPEIHLNKQVREFLLEGVSFTA*ISTGSF
Trigger: GAACGATCCCGTAGAAATCAAGGCTGTGAAGCTCAC...TCCCTCCAACAGGAACTCTCTGACCTGTTTATTCAGGTGTATTTCTGGTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp TCTTGTCCATTCCTGGGGATTGGGGAAAGAACGACAGAACTTACCTTCCATCTTCAGGTCCAGGGTTTCTaGGCACAAAAACAGTTCACT +
Preference number: 5 (lower is better)
Translates to: SCPFLGIGERTTELTFHLQVQGF*AQKQFT
Trigger: AGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTG...AAGATGGAAGGTAAGTTCTGTCGTTCTTTCCCCAATCCCCAGGAATGGACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACAAGTGGATGCTTGGCTaGGGAAATACTTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDKWMLG*GNTWPQ
Trigger: CTGGGGCCAAGTATTTCCCAAGCCAAGCATCCACTT...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGTTAGCAGCTGCTACTaGAACCCTAATCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PNPWVDVVSCNLRANVCDVSSCY*NPNPWV
Trigger: CACCCAGGGATTAGGGTTCAAGTAGCAGCTGCTAAC...ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp ACTTGGCCCCAGGTCCAGGGTTTCTTGGCACAAAAACAGTTCACTGCAAGTCTCCCATCCTGGATCCATTaGTTAAAACAAAGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: TWPQVQGFLAQKQFTASLPSWIH*LKQRRK
Trigger: TTTCCTTCTTTGTTTTAACAAATGGATCCAGGATGG...GAGACTTGCAGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTGGGGCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AACTTAAGAGCAAATGTTTGTGATGACATGCACGGGTGGGCAGAGGTTGAAAAGCAGGTCCAGGGTTTCTaGGCACAAAAACAGTTCACT +
Preference number: 5 (lower is better)
Translates to: NLRANVCDDMHGWAEVEKQVQGF*AQKQFT
Trigger: AGTGAACTGTTTTTGTGCCAAGAAACCCTGGACCTG...CTTTTCAACCTCTGCCCACCCGTGCATGTCATCACAAACATTTGCTCTTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp CCTAATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATATCCTGAGCTTTGTCTaGTGTTGGGAGTCCCACAAG +
Preference number: 5 (lower is better)
Translates to: PNPWVDVVSCNLRANVCDILSFV*CWESHK
Trigger: CTTGTGGGACTCCCAACACAAGACAAAGCTCAGGAT...ATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACATCGCTCTCTACTGCTaGGGTTCCCTTTTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDIALYC*GSLFSN
Trigger: GTTGGAGAAAAGGGAACCCAAGCAGTAGAGAGCGAT...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS-3UTR CAA 90 bp AATCCCTGGGTGGATGTGGTCTCTTGTAACTTAAGAGCAAATGTTTGTGATGACAGGAGTTATTTTATTTaGCGTGCCTGCAGTCCCCCA +
Preference number: 5 (lower is better)
Translates to: NPWVDVVSCNLRANVCDDRSYFI*RACSPP
Trigger: TGGGGGACTGCAGGCACGCAAAATAAAATAACTCCT...GTCATCACAAACATTTGCTCTTAAGTTACAAGAGACCACATCCACCCAGGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS TCA 90 bp AATGATTCTTATCCAAATCAAAATTATAGAGCAGCCACCACCACTTaGGCAGCTTACCAAGCGCTAGGCCTTATGCCACATGCCTCATAT +
Preference number: 5 (lower is better)
Translates to: NDSYPNQNYRAATTT*AAYQALGLMPHASY
Trigger: ATATGAGGCATGTGGCATAAGGCCTAGCGCTTGGTAAGCTGCTCAAGTGGTGGTGGCTGCTCTATAATTTTGATTTGGATAAGAATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS TCA 72 bp GGGAAGACAAGCCCAGTCAGAGGTAGCCCTCAGGCCTaGGTCAGGGGTCCCGGAGGTGGCTCAGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GKTSPVRGSPQA*VRGPGGGSGPG
Trigger: GCCTGGCCCTGAGCCACCTCCGGGACCCCTGACTCAGGCCTGAGGGCTACCTCTGACTGGGCTTGTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000417389.1
CDS GCA 72 bp CCAAGTAGACGAGGGGCAGGGAGATCCCGAACCACATaGACAGCAGAGCCACCATGGTGGGAAAGGGCACCG +
Preference number: 6 (lower is better)
Translates to: PSRRGAGRSRTT*TAEPPWWERAP
Trigger: CGGTGCCCTTTCCCACCATGGTGGCTCTGCTGTGCATGTGGTTCGGGATCTCCCTGCCCCTCGTCTACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 72 bp ACCGCTGCTCGGGGATCTGCCGGGGAATCTGGTTGGTaGGCACAGGGTTGTCATATGGCTGCTTTCGGAAGC +
Preference number: 6 (lower is better)
Translates to: TAARGSAGESGW*AQGCHMAAFGS
Trigger: GCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp ACCACCGCTGCTCGGGGATCTGCCGGGGAATCTGGTTaGTGCGCACAGGGTTGTCATATGGCTGCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: TTAARGSAGESG*CAQGCHMAAFG
Trigger: TCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CAA 72 bp TACCACCGCTGCTCGGGGATCTGCCGGGGAATCTGGTaGGTGCGCACAGGGTTGTCATATGGCTGCTTTCGG +
Preference number: 6 (lower is better)
Translates to: YHRCSGICRGIW*VRTGLSYGCFR
Trigger: CCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CAA 90 bp CGGTTCATGTACCACCGCTGCTCGGGGATCTGCCGGGGAATCTGGTaGGTGCGCACAGGGTTGTCATATGGCTGCTTTCGGAAGCCGAAG +
Preference number: 6 (lower is better)
Translates to: RFMYHRCSGICRGIW*VRTGLSYGCFRKPK
Trigger: CTTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 72 bp ATGAGGATGCCCACAAATCGGTTCATGTACCACCGCTaGTCGGGGATCTGCCGGGGAATCTGGTTGGTGCGC +
Preference number: 6 (lower is better)
Translates to: MRMPTNRFMYHR*SGICRGIWLVR
Trigger: GCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACCGATTTGTGGGCATCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp GGGAGATCCCGAACCACATGCACAGCAGAGCCACCATaGTGGGAAAGGGCACCGCTCCTGATGAGTGCTTTC +
Preference number: 6 (lower is better)
Translates to: GRSRTTCTAEPP*WERAPLLMSAF
Trigger: GAAAGCACTCATCAGGAGCGGTGCCCTTTCCCACCATGGTGGCTCTGCTGTGCATGTGGTTCGGGATCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp CGCAGGGTGGCTTCCTGTCCGAGGACGGAGCAAGCTTaGCCGTGGTCCACTCCAATCAGTCTATCTTCACAG +
Preference number: 6 (lower is better)
Translates to: RRVASCPRTEQA*PWSTPISLSSQ
Trigger: CTGTGAAGATAGACTGATTGGAGTGGACCACGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCACCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS CCA 72 bp ACAGAGGGGGCTTCCCTGGGAAGTGCACATGGGCTTTaGTACCATGGGCAGCCAACACCTCCTCTGACCCTT +
Preference number: 6 (lower is better)
Translates to: TEGASLGSAHGL*YHGQPTPPLTL
Trigger: AAGGGTCAGAGGAGGTGTTGGCTGCCCATGGTACCAAAGCCCATGTGCACTTCCCAGGGAAGCCCCCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 72 bp TTCCCCTGGCACACCAACCTGTCACAAGGGCAGGAGTaGACACATCATCATGACACCATCAGGGCCCGTGGG +
Preference number: 6 (lower is better)
Translates to: FPWHTNLSQGQE*THHHDTIRARG
Trigger: CCCACGGGCCCTGATGGTGTCATGATGATGTGTCCACTCCTGCCCTTGTGACAGGTTGGTGTGCCAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CAA 72 bp AACAGAGGGGGCTTCCCTGGGAAGTGCACATGGGCTTaGGTACCATGGGCAGCCAACACCTCCTCTGACCCT +
Preference number: 6 (lower is better)
Translates to: NRGGFPGKCTWA*VPWAANTSSDP
Trigger: AGGGTCAGAGGAGGTGTTGGCTGCCCATGGTACCAAAGCCCATGTGCACTTCCCAGGGAAGCCCCCTCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CAA 90 bp GCTGGGCCACTACTCTGGAATAGCAGATACATGTCCGGTACTGACTaGGTACAAGGTACCATCTGTGCTGGGCCCCGAGCTGGGTCAGCC +
Preference number: 6 (lower is better)
Translates to: AGPLLWNSRYMSGTD*VQGTICAGPRAGSA
Trigger: GGCTGACCCAGCTCGGGGCCCAGCACAGATGGTACCTTGTACCAAGTCAGTACCGGACATGTATCTGCTATTCCAGAGTAGTGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS TCA 72 bp GGGCCCCGAGCTGGGTCAGCCACACTTACATGCCTCTaGAGGGCCTTCCTACCAACTTTCATCTTGGCACTC +
Preference number: 6 (lower is better)
Translates to: GPRAGSATLTCL*RAFLPTFILAL
Trigger: GAGTGCCAAGATGAAAGTTGGTAGGAAGGCCCTTCAGAGGCATGTAAGTGTGGCTGACCCAGCTCGGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS GCA 72 bp ACAAATCGGTTCATGTACCACCGCTGCTCGGGGATCTaGCGGGGAATCTGGTTGGTGCGCACAGGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: TNRFMYHRCSGI*RGIWLVRTGLS
Trigger: TGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACATGAACCGATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp ATGTACCACCGCTGCTCGGGGATCTGCCGGGGAATCTaGTTGGTGCGCACAGGGTTGTCATATGGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: MYHRCSGICRGI*LVRTGLSYGCF
Trigger: AAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGGCAGATCCCCGAGCAGCGGTGGTACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp CTTGGTACAAGGTACCATCTGTGCTGGGCCCCGAGCTaGGTCAGCCACACTTACATGCCTCTGAAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: LGTRYHLCWAPS*VSHTYMPLKGL
Trigger: AAGGCCCTTCAGAGGCATGTAAGTGTGGCTGACCCAGCTCGGGGCCCAGCACAGATGGTACCTTGTACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS TCA 72 bp CGATGGTACCCGTTAGCAGCCAGAAGGACAAGACCATaGGGGCCGTGTAGCCAAAGTAGAGGAGAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: RWYPLAARRTRP*GPCSQSRGERG
Trigger: TCCCCTCTCTCCTCTACTTTGGCTACACGGCCCTCATGGTCTTGTCCTTCTGGCTGCTAACGGGTACCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS CCA 72 bp GTGGCTTCCTGTCCGAGGACGGAGCAAGCTTGGCCGTaGTCCACTCCAATCAGTCTATCTTCACAGCAGCAT +
Preference number: 6 (lower is better)
Translates to: VASCPRTEQAWP*STPISLSSQQH
Trigger: ATGCTGCTGTGAAGATAGACTGATTGGAGTGGACCACGGCCAAGCTTGCTCCGTCCTCGGACAGGAAGCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS CAA 72 bp CGTAGCCCTGACGGAGAAGGCAGCCCTTTCAGGGGCTaGCTCAAGAACCAGTTCTCTCCTTTCTCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: RSPDGEGSPFRG*LKNQFSPFSFP
Trigger: TGGGAAGGAGAAAGGAGAGAACTGGTTCTTGAGCAAGCCCCTGAAAGGGCTGCCTTCTCCGTCAGGGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS CCA 72 bp CATCTTTTTCCTTCTTCTTGTCATCGCTGTCTCGGTTaGAGTAGAGCTCCAGCCGGGTGGCCACAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: HLFPSSCHRCLG*SRAPAGWPQAG
Trigger: ACCTGCCTGTGGCCACCCGGCTGGAGCTCTACTCCAACCGAGACAGCGATGACAAGAAGAAGGAAAAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp CCGGGGAATCTGGTTGGTGCGCACAGGGTTGTCATATaGCTGCTTTCGGAAGCCGAAGTAGTAGCCCAAGTA +
Preference number: 6 (lower is better)
Translates to: PGNLVGAHRVVI*LLSEAEVVAQV
Trigger: TACTTGGGCTACTACTTCGGCTTCCGAAAGCAGCCATATGACAACCCTGTGCGCACCAACCAGATTCCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp TCTCCTTGGTGGGGTCAATTTCTTGGGGCGAGGAGTTaGTACCCTCAGGCAGAGTGCACGAACTCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: SPWWGQFLGARS*YPQAECTNSSH
Trigger: ATGAGAAGAGTTCGTGCACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAGAAATTGACCCCACCAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CAA 72 bp TTCTCCTTGGTGGGGTCAATTTCTTGGGGCGAGGAGTaGGTACCCTCAGGCAGAGTGCACGAACTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: FSLVGSISWGEE*VPSGRVHELFS
Trigger: TGAGAAGAGTTCGTGCACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAGAAATTGACCCCACCAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CAA 72 bp GAAGTACAGCTGATTCTCCTTGGTGGGGTCAATTTCTaGGGGCGAGGAGTTGGTACCCTCAGGCAGAGTGCA +
Preference number: 6 (lower is better)
Translates to: EVQLILLGGVNF*GRGVGTLRQSA
Trigger: TGCACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAGAAATTGACCCCACCAAGGAGAATCAGCTGTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS TCA 72 bp GGTAGAGCTAAGAAAGTCAAGGATCAGAGACGCTGGTaGCTGGCCCAGAGTCACACAGATGAAACAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GRAKKVKDQRRW*LAQSHTDETEG
Trigger: CCCCTCTGTTTCATCTGTGTGACTCTGGGCCAGTCACCAGCGTCTCTGATCCTTGACTTTCTTAGCTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 72 bp AGAGTTGCCGTACAGAAGGCTCCTTTCTTCCACCGATaGCCTTTTAAAGTGCGGTACAGACGGCCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: RVAVQKAPFFHR*PFKVRYRRPAE
Trigger: TTCTGCTGGCCGTCTGTACCGCACTTTAAAAGGCCATCGGTGGAAGAAAGGAGCCTTCTGTACGGCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp TACTCTGGAATAGCAGATACATGTCCGGTACTGACTTaGTACAAGGTACCATCTGTGCTGGGCCCCGAGCTG +
Preference number: 6 (lower is better)
Translates to: YSGIADTCPVLT*YKVPSVLGPEL
Trigger: CAGCTCGGGGCCCAGCACAGATGGTACCTTGTACCAAGTCAGTACCGGACATGTATCTGCTATTCCAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CAA 72 bp CTACTCTGGAATAGCAGATACATGTCCGGTACTGACTaGGTACAAGGTACCATCTGTGCTGGGCCCCGAGCT +
Preference number: 6 (lower is better)
Translates to: LLWNSRYMSGTD*VQGTICAGPRA
Trigger: AGCTCGGGGCCCAGCACAGATGGTACCTTGTACCAAGTCAGTACCGGACATGTATCTGCTATTCCAGAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CAA 90 bp AGAGTAGGTGAAGTACAGCTGATTCTCCTTGGTGGGGTCAATTTCTaGGGGCGAGGAGTTGGTACCCTCAGGCAGAGTGCACGAACTCTT +
Preference number: 6 (lower is better)
Translates to: RVGEVQLILLGGVNF*GRGVGTLRQSARTL
Trigger: AAGAGTTCGTGCACTCTGCCTGAGGGTACCAACTCCTCGCCCCAAGAAATTGACCCCACCAAGGAGAATCAGCTGTACTTCACCTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 72 bp AGAAGGCTCCTTTCTTCCACCGATGGCCTTTTAAAGTaGGGTACAGACGGCCAGCAGAAAATCCGCCAAACA +
Preference number: 6 (lower is better)
Translates to: RRLLSSTDGLLK*GTDGQQKIRQT
Trigger: TGTTTGGCGGATTTTCTGCTGGCCGTCTGTACCGCACTTTAAAAGGCCATCGGTGGAAGAAAGGAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS GCA 72 bp GCACCTCTCCCAGATTCTCTGCCTTGTAGGTTATCTTaGTGGGCTGGCAGAAGGGCAGTGAATAGTATTCAT +
Preference number: 6 (lower is better)
Translates to: APLPDSLPCRLS*WAGRRAVNSIH
Trigger: ATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAGAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CCA 72 bp CCTCTCCCAGATTCTCTGCCTTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAG +
Preference number: 6 (lower is better)
Translates to: PLPDSLPCRLSC*AGRRAVNSIHK
Trigger: CTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS CAA 90 bp CATGCCTCTGAAGGGCCTTCCTACCAACTTTCATCTTGGCACTCTTaGGGAGGAGTCATCATCACCATTACAACAGCATTTCCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: HASEGPSYQLSSWHS*GGVIITITTAFPEV
Trigger: GACTTCAGGAAATGCTGTTGTAATGGTGATGATGACTCCTCCCAAAGAGTGCCAAGATGAAAGTTGGTAGGAAGGCCCTTCAGAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS GCA 72 bp AGCGCTAGGCCTTATGCCACATGCCTCATATACAATTaGTACATGTGTGTGTCTATGAAAGCTTGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: SARPYATCLIYN*YMCVSMKAWPG
Trigger: ACCAGGCCAAGCTTTCATAGACACACACATGTAGCAATTGTATATGAGGCATGTGGCATAAGGCCTAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 72 bp GAGAACCCAGATTCTCTGCCTTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAG +
Preference number: 6 (lower is better)
Translates to: ENPDSLPCRLSC*AGRRAVNSIHK
Trigger: CTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417389.1
CDS CCA 72 bp TCCTTCCCAGATTCTCTGCCTTGTAGGTTATCTTGCTaGGCTGGCAGAAGGGCAGTGAATAGTATTCATAAG +
Preference number: 6 (lower is better)
Translates to: SFPDSLPCRLSC*AGRRAVNSIHK
Trigger: CTTATGAATACTATTCACTGCCCTTCTGCCAGCCCAGCAAGATAACCTACAAGGCAGAGAATCTGGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442842.5
ENST00000450829.5
CDS TCA 72 bp CTCTTCCATGTCCTCCCGATGATAGTAAAGGATGAATaGGAGGTGGTTGTGCAGGTAGATCTTGTTGACATC +
Preference number: 6 (lower is better)
Translates to: LFHVLPMIVKDE*EVVVQVDLVDI
Trigger: GATGTCAACAAGATCTACCTGCACAACCACCTCTCATTCATCCTTTACTATCATCGGGAGGACATGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217315.9
ENST00000398022.7
CDS TCA 72 bp TATCCAAATCAAAATTATAGAGCAGCCACCACCACTTaGGCAGCTTACCAAGCGCTAGGCCTTATGCCACAT +
Preference number: 6 (lower is better)
Translates to: YPNQNYRAATTT*AAYQALGLMPH
Trigger: ATGTGGCATAAGGCCTAGCGCTTGGTAAGCTGCTCAAGTGGTGGTGGCTGCTCTATAATTTTGATTTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS GCA 72 bp ACTCCAATCAGTCTATCTTCACAGCAGCATAGATCTTaGGAACAAACATGTAGGCTGCATAGAAGCCGATGG +
Preference number: 6 (lower is better)
Translates to: TPISLSSQQHRS*EQTCRLHRSRW
Trigger: CCATCGGCTTCTATGCAGCCTACATGTTTGTTCGCAAGATCTATGCTGCTGTGAAGATAGACTGATTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217315.9
ENST00000398022.7
ENST00000479591.1
ENST00000495749.1
CDS GCA 72 bp TTGAGCAGCTTACCAAGCGCTAGGCCTTATGCCACATaGCTCATATACAATTGCTACATGTGTGTGTCTATG +
Preference number: 6 (lower is better)
Translates to: LSSLPSARPYAT*LIYNCYMCVSM
Trigger: CATAGACACACACATGTAGCAATTGTATATGAGGCATGTGGCATAAGGCCTAGCGCTTGGTAAGCTGCTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CCA 72 bp AAGGGCCTTCCTACCAACTTTCATCTTGGCACTCTTTaGGAGGAGTCATCATCACCATTACAACAGCATTTC +
Preference number: 6 (lower is better)
Translates to: KGLPTNFHLGTL*EESSSPLQQHF
Trigger: GAAATGCTGTTGTAATGGTGATGATGACTCCTCCCAAAGAGTGCCAAGATGAAAGTTGGTAGGAAGGCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CAA 72 bp GAAGGGCCTTCCTACCAACTTTCATCTTGGCACTCTTaGGGAGGAGTCATCATCACCATTACAACAGCATTT +
Preference number: 6 (lower is better)
Translates to: EGPSYQLSSWHS*GGVIITITTAF
Trigger: AAATGCTGTTGTAATGGTGATGATGACTCCTCCCAAAGAGTGCCAAGATGAAAGTTGGTAGGAAGGCCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1
CDS CAA 72 bp GCAGTAACATATGGGGTGATGGAAATGTTTCACAGCTaGACTGTGATGGTGGTTCCAGAACTGTATGCATTT +
Preference number: 6 (lower is better)
Translates to: AVTYGVMEMFHS*TVMVVPELYAF
Trigger: AAATGCATACAGTTCTGGAACCACCATCACAGTCAAGCTGTGAAACATTTCCATCACCCCATATGTTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479591.1
CDS CAA 90 bp CTGGTAAGAGCAGTAACATATGGGGTGATGGAAATGTTTCACAGCTaGACTGTGATGGTGGTTCCAGAACTGTATGCATTTCTAAAAACC +
Preference number: 6 (lower is better)
Translates to: LVRAVTYGVMEMFHS*TVMVVPELYAFLKT
Trigger: GGTTTTTAGAAATGCATACAGTTCTGGAACCACCATCACAGTCAAGCTGTGAAACATTTCCATCACCCCATATGTTACTGCTCTTACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479591.1
CDS CCA 72 bp ATATACAATTGCTACATGTGTGTGTCTATGAAAGCTTaGCCTGGTAGAGCTAAGAAAGTCAAGGATCAGAGA +
Preference number: 6 (lower is better)
Translates to: IYNCYMCVSMKA*PGRAKKVKDQR
Trigger: TCTCTGATCCTTGACTTTCTTAGCTCTACCAGGCCAAGCTTTCATAGACACACACATGTAGCAATTGTATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495749.1