RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TM9SF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100926

Ensembl transcript IDs: ENST00000261789.9, ENST00000396854.8, ENST00000524835.5, ENST00000525592.1, ENST00000528010.1, ENST00000528669.5, ENST00000528895.5, ENST00000529332.5, ENST00000530468.5, ENST00000530563.1, ENST00000531406.1, ENST00000532632.1, ENST00000642799.1, ENST00000642990.1, ENST00000643382.1, ENST00000643801.1, ENST00000643885.1, ENST00000644349.1, ENST00000644476.1, ENST00000645452.1, ENST00000645838.1, ENST00000645992.1, ENST00000646500.1, ENST00000646762.2

Found 712 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAGCCCCCACACTCAGCAGGATGGCGA +
Preference number: 1 (lower is better)
Translates to: IATTSGNPPQTTGSR*VQWRCKPPHSAGWR
Trigger: TCGCCATCCTGCTGAGTGTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR GCA 90 bp CCACCACCAGCGGTAATCCTCCCCAGACAACTGGAAGTAGGTGAGTaGAATGGAGATGCAAGCCCCCACACTCAGCAGGATGGCGAAGAC +
Preference number: 1 (lower is better)
Translates to: PPPAVILPRQLEVGE*NGDASPHTQQDGED
Trigger: GTCTTCGCCATCCTGCTGAGTGTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGATTACCGCTGGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR CCA 90 bp AAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: KPPTVMWMTVDLYQG*GGISRAMFLVRQGA
Trigger: TGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR CCA 90 bp TCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTaGATGACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGG +
Preference number: 1 (lower is better)
Translates to: STEMALKGRKPPTVM*MTVDLYQGWGGISR
Trigger: CCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR TCA 90 bp ACATGTTGGAGCGCCGGGCATAATAGAAAACTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAACACTCAGCACAGATCGCCACCACC +
Preference number: 1 (lower is better)
Translates to: TCWSAGHNRKLSRGR*RGRWSQHSAQIATT
Trigger: GGTGGTGGCGATCTGTGCTGAGTGTTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAGTTTTCTATTATGCCCGGCGCTCCAACATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR TCA 90 bp CTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACTaGACCAGGGATCAACGGGTTGGGTTAGGGTACTGGATGAGTAGG +
Preference number: 1 (lower is better)
Translates to: LGDRRNHLMISEWYH*TRDQRVGLGYWMSR
Trigger: CCTACTCATCCAGTACCCTAACCCAACCCGTTGATCCCTGGTTCAGTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR GCA 90 bp CTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAACAATaGCATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGA +
Preference number: 1 (lower is better)
Translates to: LSGEGMPKGQKGRQQ*HHTIQSIRREAGRR
Trigger: TCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
3UTR-3UTR CCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGAGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 2 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR CAA 90 bp CTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: LKGRKPPTVMWMTVD*YQGWGGISRAMFLV
Trigger: CACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CCA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTAGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 2 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 2 (lower is better)
Translates to: TGHEERERTAIVLPYRTQVPGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGAGTTCAACAGGGCATaGAGAAAGGGAGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGEFNRA*RKGENS
Trigger: GCTGTTCTCTCCCTTTCTTCATGCCCTGTTGAACTC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
3UTR-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCGTTGGGTTAGGGTACTaGATGAGTAGGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTVGLGY*MSRDRK
Trigger: TTTCCTGTCCCTACTCATCCAGTACCCTAACCCAAC...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 2 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR TCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGGAGTTCAACAGGGCATaGAGAAAGGGAGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: TGHEERERTAIVLPYRTQEFNRA*RKGENS
Trigger: GCTGTTCTCTCCCTTTCTTCATGCCCTGTTGAACTC...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR GCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCATTCAAGCTCAGTCCTaGTTGGGGATAGGAGGAACC +
Preference number: 2 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSIQAQS*LGIGGT
Trigger: GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAAT...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR-3UTR CCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAACAGGGATCAACGGGTTaGGTTAGGGTACTGGATGAG +
Preference number: 2 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEQGSTG*VRVLDE
Trigger: CTCATCCAGTACCCTAACCCAACCCGTTGATCCCTG...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR-3UTR GCA 90 bp GAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACACCGTACAAAGTGTACTaGTCCCGACCCCATACTGTG +
Preference number: 2 (lower is better)
Translates to: ERTAIVLPYRTQSILRLTPYKVY*SRPHTV
Trigger: CACAGTATGGGGTCGGGAGCAGTACACTTTGTACGG...TGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR GCA 90 bp GAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACACTGGAAGTAGGTGAGTaGAATGGAGATGCAAGCCCC +
Preference number: 2 (lower is better)
Translates to: ERTAIVLPYRTQSILRLTLEVGE*NGDASP
Trigger: GGGGCTTGCATCTCCATTGCACTCACCTACTTCCAG...TGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCAGGGATCAACGGGTTaGGTTAGGGTACTGGATGAG +
Preference number: 2 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVQGSTG*VRVLDE
Trigger: CTCATCCAGTACCCTAACCCAACCCGTTGATCCCTG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 2 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
3UTR-3UTR CCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 2 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDILPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR TCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCCATTTAATGATCTCTaGATGGTACCACTGAACCAG +
Preference number: 2 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNPFNDL*MVPLNQ
Trigger: CTGGTTCAGTGGTACCATTCAGAGATCATTAAATGG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR-3UTR GCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGTACAAAGTGTACTaGTCCCGACCCCATACTGTG +
Preference number: 2 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIPYKVY*SRPHTV
Trigger: CACAGTATGGGGTCGGGAGCAGTACACTTTGTACGG...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CCA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGTTGGGTTAGGGTACTaGATGAGTAGGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGEVGLGY*MSRDRK
Trigger: TTTCCTGTCCCTACTCATCCAGTACCCTAACCCAAC...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 2 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR GCA 90 bp GAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACAAGACAAAGAAGAGGATaGCGTACAAAGTGTACTGCT +
Preference number: 2 (lower is better)
Translates to: ERTAIVLPYRTQSILRLTRQRRG*RTKCTA
Trigger: AGCAGTACACTTTGTACGGCATCCTCTTCTTTGTCT...TGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 2 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
3UTR CCA 72 bp CATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGG +
Preference number: 3 (lower is better)
Translates to: HVDDSRLVPGLG*NLPGDVLGATG
Trigger: CCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CAA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: ILPRQLEVGECNGDASPHWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR TCA 72 bp ACCAGCGGTAATCCTCCCCAGACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAGCCCCCACACTCAGCA +
Preference number: 3 (lower is better)
Translates to: TSGNPPQTTGSR*VQWRCKPPHSA
Trigger: TGCTGAGTGTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGATTACCGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR CCA 72 bp ATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTaGATGACAGTAGACTTGTACCAGGGCTGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: MALKGRKPPTVM*MTVDLYQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR TCA 72 bp AGCGCCGGGCATAATAGAAAACTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAACACTCAGCACAGATC +
Preference number: 3 (lower is better)
Translates to: SAGHNRKLSRGR*RGRWSQHSAQI
Trigger: GATCTGTGCTGAGTGTTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAGTTTTCTATTATGCCCGGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR CCA 72 bp TGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCTCCACAGAGATGGCAC +
Preference number: 3 (lower is better)
Translates to: CRTKCTAPDPIL*QRCSTAPQRWH
Trigger: GTGCCATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR CCA 72 bp GTGCAATGGAGATGCAAGCCCCCACACTCAGCAGGATaGCGAAGACAAAGAAGAGGATGCCGTACAAAGTGT +
Preference number: 3 (lower is better)
Translates to: VQWRCKPPHSAG*RRQRRGCRTKC
Trigger: ACACTTTGTACGGCATCCTCTTCTTTGTCTTCGCCATCCTGCTGAGTGTGGGGGCTTGCATCTCCATTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CAA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTATGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
3UTR-3UTR CAA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCAAGCTCAGTCCTGCTaGGGGATAGGAGGAACCATT +
Preference number: 3 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSQAQSC*GIGGTI
Trigger: AATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR TCA 72 bp AGGAGGAACCATTTAATGATCTCTGAATGGTACCACTaGACCAGGGATCAACGGGTTGGGTTAGGGTACTGG +
Preference number: 3 (lower is better)
Translates to: RRNHLMISEWYH*TRDQRVGLGYW
Trigger: CCAGTACCCTAACCCAACCCGTTGATCCCTGGTTCAGTGGTACCATTCAGAGATCATTAAATGGTTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
3UTR TCA 72 bp GGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTaGGACACTCTCATATCATTCAAGCTCAGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: GEGGNVSGELYK*DTLISFKLSPA
Trigger: AGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCCTGCCTTTGGGCTCCTaGTGGGGTCTCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VPGLGWNLPGDVLGATGCLPLGS*WGLSHS
Trigger: GCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAG...GCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: VPGLGWNLPGDVLGATGCPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...GCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGSRPRS*LWAPAG
Trigger: CCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGA...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GGCCGGTGGAGCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GRWSQHSAQIATTSGNPPSEAAG*LWLAEP
Trigger: TGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...GGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGCTCCACCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACCCTTTGGGCTCCTGCTaGGGTCTCTCCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: ILPRQLEVGECNGDASPHPLGSC*GLSHSG
Trigger: GCCGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGG...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLVPGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGTCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRSRPRS*LWAPAG
Trigger: CCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGA...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCTTTGGGCTCCTGCTaGGGTCTCTCCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGPLGSC*GLSHSG
Trigger: GCCGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGTCATCCTTAAGGCAGTaGAACCGCGCGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLSSLRQ*NRAGRA
Trigger: AGCCCTTCCCGCGCGGTTCCACTGCCTTAAGGATGA...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGCCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GTAGCCGAAGAACTCTACTGTCTGTACTGCCCCAGACATGTTGGAGCGCCGGGCCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: VAEELYCLYCPRHVGAPGPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...GCCCGGCGCTCCAACATGTCTGGGGCAGTACAGACAGTAGAGTTCTTCGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCTGGCCCGTTTCCATaGCAACGCCGCTCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGPGPFP*QRRSVS
Trigger: CGAGACCGAGCGGCGTTGCCATGGAAACGGGCCAGG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR GCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTGCCTTTGGGCTCCTaGTGGGGTCTCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGLPLGS*WGLSHS
Trigger: GCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTCTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: DSRLVPGLGWNLPGDVLGLGATG*IKGAGV
Trigger: AACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAG...ACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCACCTGACAGCGGCGGCTaGGGCTACACCGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSPDSGG*GYTALD
Trigger: GTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGG...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTTCATCCTTAAGGCAGTaGAACCGCGCGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: DSRLVPGLGWNLPGDVLGSSLRQ*NRAGRA
Trigger: AGCCCTTCCCGCGCGGTTCCACTGCCTTAAGGATGA...ACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: VPGLGWNLPGDVLGATGCRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...GCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTAGCCGAAGAACTCTACTGTCTGTACTGCCCCAGACATGTTGGAGCGCCGGGCCTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: VAEELYCLYCPRHVGAPGLPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...GCCCGGCGCTCCAACATGTCTGGGGCAGTACAGACAGTAGAGTTCTTCGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGGCACAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGGTGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGTGCC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGCAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGCCCGTTGCTGCGCCTaGCAGCGGCGGCTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNARCCA*QRRLRL
Trigger: TAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGC...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGCCCGTTGCTGCGCCTaGCAGCGGCGGCTGCGGCTA +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGARCCA*QRRLRL
Trigger: TAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGC...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCATCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSSRPRS*LWAPAG
Trigger: CCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGA...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATCCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VLLPTPYCGKDVVQLHRDPRSCL*APAGVS
Trigger: AGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGG...ATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: DSRLVPGLGWNLPGDVLGRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...ACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: ILPRQLEVGECNGDASPHEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGAAGWL*LAEPVS
Trigger: CGACACAGGCTCTGCCAGCCACAACCATCCTGCTGC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCCCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: VPGLGWNLPGDVLGATGCPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...GCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTCAGGATGGTTGTGGCTaGCAGAGCCAGAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: DSRLVPGLGWNLPGDVLGQDGCG*QSQRRD
Trigger: GTCTCTTCTCTGGCTCTGCCAGCCACAACCATCCTG...ACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGGCAGCAGGATGGTTGTaGCTGGCAGAGCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGAAGWL*LAEPEK
Trigger: CTTCTCTGGCTCTGCCAGCCACAACCATCCTGCTGC...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTCTACTACGCGCCCTaGCCCGTTTCCATGGCAACG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGLYYAP*PVSMAT
Trigger: CGTTGCCATGGAAACGGGCCAGGGCGCGTAGTAGAG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCACCCGCAGCCCGTCTaGCCCGGGGCCTCTACTACG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMHPQPV*PGASTT
Trigger: CGTAGTAGAGGCCCCGGGCCAGACGGGCTGCGGGTG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
3UTR CAA 72 bp AGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATG +
Preference number: 4 (lower is better)
Translates to: RKPPTVMWMTVD*YQGWGGISRAM
Trigger: CATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp AAAGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAACTGCCTTTGGGCTCCTaGTGGGGTCTCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: KEEDAVQSVLLPTPYCGKLPLGS*WGLSHS
Trigger: GCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAG...TTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSRPRS*LWAPAG
Trigger: CCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCCTGACAGCGGCGGCTaGGGCTACACCGCGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNPDSGG*GYTALD
Trigger: GTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCGGGTTGGAGAGGACCTaGCGACCGACTTCTACGGGG +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTGLERT*RPTSTG
Trigger: CCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCC...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGACCCCGCTCCACCTCTaGTCTCTCATCCTCCCAACC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRTPLHL*SLILPT
Trigger: GGTTGGGAGGATGAGAGAGCAGAGGTGGAGCGGGGT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp ATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MWMTVDLYQGWGGISRAMSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...CATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VPGLGWNLPGDVLGATGCIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...GCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCCGGTGGAGCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: GRWSQHSAQIATTSGNPPMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...GGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGCTCCACCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: GTERQEASNSHVDDSRLVPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...TACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGQDGCG*QSLCRT
Trigger: GGTTCGACACAGGCTCTGCCAGCCACAACCATCCTG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRAAGWL*LAEPVS
Trigger: CGACACAGGCTCTGCCAGCCACAACCATCCTGCTGC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRVPGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCTGCGCCTTCTCCATCTaGAGGCCCGGCCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSCAFSI*RPGPAP
Trigger: CGGAGCTGGGCCGGGCCTCCAGATGGAGAAGGCGCA...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CCAGCGGTAATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCACCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PAVILPRQLEVGECNGDAPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...TGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGATTACCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCATGACGGTGCACATTaGACATGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGHDGAH*TCPAVP
Trigger: TGGCACTGCTGGGCATGTTCAATGTGCACCGTCATG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GTAGCCGAAGAACTCTACTGTCTGTACTGCCCCAGACATGTTGGAGCGCCGGGCACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: VAEELYCLYCPRHVGAPGTTGSR*VQWRCK
Trigger: CTTGCATCTCCATTGCACTCACCTACTTCCAGTTGT...GCCCGGCGCTCCAACATGTCTGGGGCAGTACAGACAGTAGAGTTCTTCGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATTCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNSRPRS*LWAPAG
Trigger: CCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGA...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: VLLPTPYCGKDVVQLHRDLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...ATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CTCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: LHRDGTERQEASNSHVDDQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...GTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATGGCACTGAAAGGCAGATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PYCGKDVVQLHRDGTERQMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...CTGCCTTTCAGTGCCATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGGRCSW*DRVHQR
Trigger: CCTTTGATGCACCCTGTCGCACCAAGAACATCGCCC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CTCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: LHRDGTERQEASNSHVDDGRCSW*DRVHQR
Trigger: CCTTTGATGCACCCTGTCGCACCAAGAACATCGCCC...GTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCCGACTTCTACGGGGTTaGCCGTTGCTGCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTRLLRG*PLLRLT
Trigger: TGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCG...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGTCCCCTGGCTCCACTTaGTCCCATTGGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMSPGST*SHWPPP
Trigger: GGGAGGGGGCCAATGGGAGCAAGTGGAGCCAGGGGA...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCCTTTGGGCTCCTGCTaGGGTCTCTCCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGPLGSC*GLSHSG
Trigger: GCCGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGTCATCCTTAAGGCAGTaGAACCGCGCGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRSSLRQ*NRAGRA
Trigger: AGCCCTTCCCGCGCGGTTCCACTGCCTTAAGGATGA...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGREQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCACCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRAGRSG*TRSQRC
Trigger: GCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRQDGCG*QSLCRT
Trigger: GGTTCGACACAGGCTCTGCCAGCCACAACCATCCTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTAAGWL*LAEPVS
Trigger: CGACACAGGCTCTGCCAGCCACAACCATCCTGCTGC...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGSEAAG*LWLAEP
Trigger: AGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGTGCGCCTTCTCCATCTaGAGGCCCGGCCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMCAFSI*RPGPAP
Trigger: CGGAGCTGGGCCGGGCCTCCAGATGGAGAAGGCGCA...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CTCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACCAGGATGGTTGTGGCTaGCAGAGCCAGAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LHRDGTERQEASNSHVDDQDGCG*QSQRRD
Trigger: GTCTCTTCTCTGGCTCTGCCAGCCACAACCATCCTG...GTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCTGGCCCGTTTCCATaGCAACGCCGCTCGGTCTCG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPGPFP*QRRSVS
Trigger: CGAGACCGAGCGGCGTTGCCATGGAAACGGGCCAGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCTCATCCTCCCAACCTaGGGTTCACCCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGLILPT*GSPHPQ
Trigger: CTGCGGGTGGGGTGAACCCCAGGTTGGGAGGATGAG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGAACTGAGGTCCCCTaGCTCCACTTGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRRTEVP*LHLLPL
Trigger: CAATGGGAGCAAGTGGAGCCAGGGGACCTCAGTTCG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGAGATGGCACAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGEMAQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGTGCCATCTC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGAGATGGCACAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMEMAQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGTGCCATCTC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp AGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: RDGTERQEASNSHVDDSRPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...TCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGGAGTTCAACAGGGCATaGAGAAAGGGAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGEFNRA*RKGENS
Trigger: GCTGTTCTCTCCCTTTCTTCATGCCCTGTTGAACTC...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CTCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACCCGTACAAAGTGTACTaGTCCCGACCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: LHRDGTERQEASNSHVDDPYKVY*SRPHTV
Trigger: CACAGTATGGGGTCGGGAGCAGTACACTTTGTACGG...GTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CCAGCGGTAATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCACTGGAAGTAGGTGAGTaGAATGGAGATGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PAVILPRQLEVGECNGDALEVGE*NGDASP
Trigger: GGGGCTTGCATCTCCATTGCACTCACCTACTTCCAG...TGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGATTACCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTCTCTGGGGAAGGAATaGCCAAAGGGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGSLGKE*PKGKRE
Trigger: TTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGA...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGACCCCGCTCCACCTCTaGTCTCTCATCCTCCCAACC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGTPLHL*SLILPT
Trigger: GGTTGGGAGGATGAGAGAGCAGAGGTGGAGCGGGGT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp GGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACCCTTTGGGCTCCTGCTaGGGTCTCTCCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: GENSNSSAIQNSVHLEVNPLGSC*GLSHSG
Trigger: GCCGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGG...GTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPRSCL*APAGVS
Trigger: AGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCTCATCCTTAAGGCAGTaGAACCGCGCGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTSSLRQ*NRAGRA
Trigger: AGCCCTTCCCGCGCGGTTCCACTGCCTTAAGGATGA...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: MWMTVDLYQGWGGISRAMPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...CATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTAAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: GTERQEASNSHVDDSRLVNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...TACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTAGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: GTERQEASNSHVDDSRLVEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...TACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTAGRSG*TRSQRC
Trigger: GCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGC...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGAAGWL*LAEPVS
Trigger: CGACACAGGCTCTGCCAGCCACAACCATCCTGCTGC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACGTGCATCAAAGGGGCTaGCGTTGTTCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ILPRQLEVGECNGDASPHVHQRG*RCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCAC...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSVPGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRLPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCCGCTGGACACCGCTCTaGCTTACTCAAGAACTCCCC +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTRWTPL*LTQELP
Trigger: GGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCG...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCGCGGCTACACCGCGCTaGACACCGCTCTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSAATPR*TPLWLT
Trigger: AGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGC...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCGCGGTAGCGGCGGGTTaGAGAGGACCTGCCGACCGA +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVAVAAG*RGPADR
Trigger: TCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGC...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGGCACAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMGTGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGTGCC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGRLRLL*RIFSGQ
Trigger: CTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCACCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGAGTTAATGGCCCCATaGCGGTGCACATTGAACATG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGELMAP*RCTLNM
Trigger: CATGTTCAATGTGCACCGTCATGGGGCCATTAACTC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGATTGGCCCAATGCACTaGGTTCACCACACTCCACGT +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRIGPMH*VHHTPR
Trigger: ACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAAT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR TCA 90 bp AGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RDGTERQEASNSHVDDSRLSRGR*RGRWSQ
Trigger: TTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAG...TCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCAGGTGCCTCGAACTaGGGTCCCCTGGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSGASN*GPLAPL
Trigger: AAGTGGAGCCAGGGGACCTCAGTTCGAGGCACCTGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR GCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCTGCCTTTGGGCTCCTaGTGGGGTCTCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNLPLGS*WGLSHS
Trigger: GCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCTGCCTTTGGGCTCCTaGTGGGGTCTCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMLPLGS*WGLSHS
Trigger: GCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTACAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGAGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRTRSQR*SRSGHT
Trigger: TGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTGRCSW*DRVHQR
Trigger: CCTTTGATGCACCCTGTCGCACCAAGAACATCGCCC...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTGGAAGTAGGTGAGTaGAATGGAGATGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRLEVGE*NGDASP
Trigger: GGGGCTTGCATCTCCATTGCACTCACCTACTTCCAG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CTCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACTCTCTGGGGAAGGAATaGCCAAAGGGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LHRDGTERQEASNSHVDDSLGKE*PKGKRE
Trigger: TTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGA...GTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCGACTTCTACGGGGTTaGCCGTTGCTGCGCCTGACA +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSRLLRG*PLLRLT
Trigger: TGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAATCCCCTGGCTCCACTTaGTCCCATTGGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKSPGST*SHWPPP
Trigger: GGGAGGGGGCCAATGGGAGCAAGTGGAGCCAGGGGA...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAAACCCCAGGTCAGGTaGCTCGAACTGAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGKPQVR*LELRSP
Trigger: AGGGGACCTCAGTTCGAGGCACCTGACCTGGGGTTT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCCTTTGGGCTCCTGCTaGGGTCTCTCCCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVPLGSC*GLSHSG
Trigger: GCCGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGPRSCL*APAGVS
Trigger: AGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACCCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: GENSNSSAIQNSVHLEVNPRSCL*APAGVS
Trigger: AGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGG...GTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMPRSCL*APAGVS
Trigger: AGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGAAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGYLVAV*QETTLL
Trigger: GAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGAGRSG*TRSQRC
Trigger: GCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCACCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGVPGLG*NLPGDV
Trigger: AACATCGCCCGGGAGATTCCACCCCAGCCCTGGTAC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGACTTGTACCAGGGCTaGGGTGGAATCTCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGDLYQG*GGISRA
Trigger: CGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTC...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGCGGCTACACCGCGCTaGACACCGCTCTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNAATPR*TPLWLT
Trigger: AGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGC...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCTCTACTACGCGCCCTaGCCCGTTTCCATGGCAACG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGLYYAP*PVSMAT
Trigger: CGTTGCCATGGAAACGGGCCAGGGCGCGTAGTAGAG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACACCCGCAGCCCGTCTaGCCCGGGGCCTCTACTACG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGHPQPV*PGASTT
Trigger: CGTAGTAGAGGCCCCGGGCCAGACGGGCTGCGGGTG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGCCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: TGHEERERTAIVLPYRTQPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGAGTTAATGGCCCCATaGCGGTGCACATTGAACATG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRELMAP*RCTLNM
Trigger: CATGTTCAATGTGCACCGTCATGGGGCCATTAACTC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: GTERQEASNSHVDDSRLVQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...TACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTGGCCCAATGCACTaGGTTCACCACACTCCACGT +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTIGPMH*VHHTPR
Trigger: ACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAAT...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGTTGSR*VQWRCK
Trigger: CTTGCATCTCCATTGCACTCACCTACTTCCAGTTGT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGLSRGR*RGRWSQ
Trigger: TTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACAGAAGACATAACCAGTaGGTAAGGAGTAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: ILPRQLEVGECNGDASPHRRHNQ*VRSSRR
Trigger: TCTTCGGCTACTCCTTACTCACTGGTTATGTCTTCT...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGAGATGGTGCCCAGCATaGGGAAGAAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRRWCPA*GRRHNQ
Trigger: CTGGTTATGTCTTCTTCCTCATGCTGGGCACCATCT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGATCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGSRPRS*LWAPAG
Trigger: CCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGA...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGAACCATTGGCCCAATaGACTGAGTTCACCACACTC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGREPLAQ*TEFTTL
Trigger: GAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGLGATG*IKGAGV
Trigger: AACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMLGATG*IKGAGV
Trigger: AACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGTCTCTGGGGAAGGAATaGCCAAAGGGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRSLGKE*PKGKRE
Trigger: TTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGA...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCGGGTTGGAGAGGACCTaGCGACCGACTTCTACGGGG +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVGLERT*RPTSTG
Trigger: CCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCC...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGAAACCCCAGGTCAGGTaGCTCGAACTGAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMKPQVR*LELRSP
Trigger: AGGGGACCTCAGTTCGAGGCACCTGACCTGGGGTTT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLLPTPYCGKDVVQLHRDQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...ATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGACTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRYLVAV*QETTLL
Trigger: GAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: TGHEERERTAIVLPYRTQNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGNPSKL*GLTSRT
Trigger: AGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACCAAGGGCCAGGAACTaGGCACCCACGCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKPRARN*APTPST
Trigger: TGTGCTTGGCGTGGGTGCCCAGTTCCTGGCCCTTGG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGAGRSG*TRSQRC
Trigger: GCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRPVSNH*PNALSS
Trigger: TGAACTCAGTGCATTGGGCCAATGGTTCGACACAGG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMQDGCG*QSLCRT
Trigger: GGTTCGACACAGGCTCTGCCAGCCACAACCATCCTG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMAAGWL*LAEPVS
Trigger: CGACACAGGCTCTGCCAGCCACAACCATCCTGCTGC...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGSEAAG*LWLAEP
Trigger: AGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGLPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCGCTGGACACCGCTCTaGCTTACTCAAGAACTCCCC +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSRWTPL*LTQELP
Trigger: GGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCGAACTGAGGTCCCCTaGCTCCACTTGCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGRTEVP*LHLLPL
Trigger: CAATGGGAGCAAGTGGAGCCAGGGGACCTCAGTTCG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGACAGCTCCACAGAGATaGCACAGGGCTGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMTAPQR*HRAGVE
Trigger: TTCCACCCCAGCCCTGTGCCATCTCTGTGGAGCTGT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCACAGCTCCACAGAGATaGCACAGGGCTGGGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGTAPQR*HRAGVE
Trigger: TTCCACCCCAGCCCTGTGCCATCTCTGTGGAGCTGT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAACCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCATGACGGTGCACATTaGACATGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSHDGAH*TCPAVP
Trigger: TGGCACTGCTGGGCATGTTCAATGTGCACCGTCATG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp AGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGAGAGTTAATGGCCCCATaGCGGTGCACATTGAACATG +
Preference number: 4 (lower is better)
Translates to: RDGTERQEASNSHVDDSRELMAP*RCTLNM
Trigger: CATGTTCAATGTGCACCGTCATGGGGCCATTAACTC...TCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRTTGSR*VQWRCK
Trigger: CTTGCATCTCCATTGCACTCACCTACTTCCAGTTGT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGLSRGR*RGRWSQ
Trigger: TTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMLSRGR*RGRWSQ
Trigger: TTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGAAGACATAACCAGTaGGTAAGGAGTAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGRRHNQ*VRSSRR
Trigger: TCTTCGGCTACTCCTTACTCACTGGTTATGTCTTCT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTAAGATGGTGCCCAGCATaGGGAAGAAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVRWCPA*GRRHNQ
Trigger: CTGGTTATGTCTTCTTCCTCATGCTGGGCACCATCT...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAATCAGGTGCCTCGAACTaGGGTCCCCTGGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKSGASN*GPLAPL
Trigger: AAGTGGAGCCAGGGGACCTCAGTTCGAGGCACCTGA...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR GCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSTRSQR*SRSGHT
Trigger: TGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGT...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGTRSQR*SRSGHT
Trigger: TGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMLGATG*IKGAGV
Trigger: AACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGGRCSW*DRVHQR
Trigger: CCTTTGATGCACCCTGTCGCACCAAGAACATCGCCC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSGRCSW*DRVHQR
Trigger: CCTTTGATGCACCCTGTCGCACCAAGAACATCGCCC...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCCGTACAAAGTGTACTaGTCCCGACCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGPYKVY*SRPHTV
Trigger: CACAGTATGGGGTCGGGAGCAGTACACTTTGTACGG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: TGHEERERTAIVLPYRTQSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTATATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVYLVAV*QETTLL
Trigger: GAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATGGCACTGAAAGGCAGCAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: PYCGKDVVQLHRDGTERQQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...CTGCCTTTCAGTGCCATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGAAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGAGRSG*TRSQRC
Trigger: GCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGC...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMQDGCG*QSLCRT
Trigger: GGTTCGACACAGGCTCTGCCAGCCACAACCATCCTG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNQDGCG*QSLCRT
Trigger: GGTTCGACACAGGCTCTGCCAGCCACAACCATCCTG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSSEAAG*LWLAEP
Trigger: AGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSEAAG*LWLAEP
Trigger: AGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGCTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: TGHEERERTAIVLPYRTQLPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGLPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCACAGGGATCAACGGGTTaGGTTAGGGTACTGGATGAG +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSQGSTG*VRVLDE
Trigger: CTCATCCAGTACCCTAACCCAACCCGTTGATCCCTG...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSEAAG*LWLAEP
Trigger: TGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGRLRLL*RIFSGQ
Trigger: CTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAACATGACGGTGCACATTaGACATGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEHDGAH*TCPAVP
Trigger: TGGCACTGCTGGGCATGTTCAATGTGCACCGTCATG...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGATTGGCCCAATGCACTaGGTTCACCACACTCCACGT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMIGPMH*VHHTPR
Trigger: ACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAAT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGAGATGGTGCCCAGCATaGGGAAGAAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGRWCPA*GRRHNQ
Trigger: CTGGTTATGTCTTCTTCCTCATGCTGGGCACCATCT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCAGAAACCAGGAAGGTaGAGGGGGAAATGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMQKPGR*RGKCLR
Trigger: CCGGAGACATTTCCCCCTTCACCTTCCTGGTTTCTG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTATGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVCAELS*MWHRIL
Trigger: GAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACA...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp AAAGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAATGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: KEEDAVQSVLLPTPYCGKCAELS*MWHRIL
Trigger: GAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACA...TTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGAACCATTGGCCCAATaGACTGAGTTCACCACACTC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGEPLAQ*TEFTTL
Trigger: GAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKLGATG*IKGAGV
Trigger: AACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCCGTACAAAGTGTACTaGTCCCGACCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGPYKVY*SRPHTV
Trigger: CACAGTATGGGGTCGGGAGCAGTACACTTTGTACGG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAGACAAAGAAGAGGATaGCGTACAAAGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGRQRRG*RTKCTA
Trigger: AGCAGTACACTTTGTACGGCATCCTCTTCTTTGTCT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCTGGAAGTAGGTGAGTaGAATGGAGATGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMLEVGE*NGDASP
Trigger: GGGGCTTGCATCTCCATTGCACTCACCTACTTCCAG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGTCTCTGGGGAAGGAATaGCCAAAGGGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGSLGKE*PKGKRE
Trigger: TTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGA...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTTCAAGAACTCCCCGTTaGGCCTTCTCCATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGSRTPR*AFSIWR
Trigger: CCTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGA...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPRSCL*APAGVS
Trigger: AGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCACTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: RKVKGEMSPESFISETLSLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTAGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GTERQEASNSHVDDSRLVELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...TACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATAGTTCTTCAATGGCCTaGCGCAGCTGCTCCACCTGT +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNSSSMA*RSCSTC
Trigger: ACAGGTGGAGCAGCTGCGCCAGGCCATTGAAGAACT...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: IISRPSLGKECPKGKREGMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: GTERQEASNSHVDDSRLVQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...TACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKAGRSG*TRSQRC
Trigger: GCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKQDGCG*QSLCRT
Trigger: GGTTCGACACAGGCTCTGCCAGCCACAACCATCCTG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGTGCATCAAAGGGGCTaGCGTTGTTCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGVHQRG*RCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCAC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCAGGGATCAACGGGTTaGGTTAGGGTACTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHQGSTG*VRVLDE
Trigger: CTCATCCAGTACCCTAACCCAACCCGTTGATCCCTG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGRLRLL*RIFSGQ
Trigger: CTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTTGACGTCCCGCACTaGAACATTGGCAAATATAAT +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRLDVPH*NIGKYN
Trigger: ATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGTPTLH*SLRPAH
Trigger: GTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGAGTTAATGGCCCCATaGCGGTGCACATTGAACATG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMELMAP*RCTLNM
Trigger: CATGTTCAATGTGCACCGTCATGGGGCCATTAACTC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAACAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCAACAAGATGGCTGCTaGGTTAATGGCCCCATGACG +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMQQDGC*VNGPMT
Trigger: CGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATATTGGCCCAATGCACTaGGTTCACCACACTCCACGT +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNIGPMH*VHHTPR
Trigger: ACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAAT...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACTGAGTAGAGGAAGATaGAGAGGCCGGTGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKLSRGR*RGRWSQ
Trigger: TTGGCTCCACCGGCCTCTTCATCTTCCTCTACTCAG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp AGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGAAGAAGACATAACCAGTaGGTAAGGAGTAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RDGTERQEASNSHVDDSRRRHNQ*VRSSRR
Trigger: TCTTCGGCTACTCCTTACTCACTGGTTATGTCTTCT...TCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCAGAAACCAGGAAGGTaGAGGGGGAAATGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVQKPGR*RGKCLR
Trigger: CCGGAGACATTTCCCCCTTCACCTTCCTGGTTTCTG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGTGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGCAELS*MWHRIL
Trigger: GAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACA...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCAGCTGCTCCACCTGTaGAGAACTGAGCTGCATGTG +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVQLLHL*RTELHV
Trigger: CACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp GGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: GENSNSSAIQNSVHLEVNTRSQR*SRSGHT
Trigger: TGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGT...GTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMTRSQR*SRSGHT
Trigger: TGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGT...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGAACCATTGGCCCAATaGACTGAGTTCACCACACTC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGEPLAQ*TEFTTL
Trigger: GAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKGRCSW*DRVHQR
Trigger: CCTTTGATGCACCCTGTCGCACCAAGAACATCGCCC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGAAGACAAAGAAGAGGATaGCGTACAAAGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: RRGCRTKCTAPDPILWQRRQRRG*RTKCTA
Trigger: AGCAGTACACTTTGTACGGCATCCTCTTCTTTGTCT...TCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp GTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VLLPTPYCGKDVVQLHRDKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...ATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGTCTCTGGGGAAGGAATaGCCAAAGGGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMSLGKE*PKGKRE
Trigger: TTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGA...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAATCATCCTTAAGGCAGTaGAACCGCGCGGGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGESSLRQ*NRAGRA
Trigger: AGCCCTTCCCGCGCGGTTCCACTGCCTTAAGGATGA...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGYLVAV*QETTLL
Trigger: GAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHPVSNH*PNALSS
Trigger: TGAACTCAGTGCATTGGGCCAATGGTTCGACACAGG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGAAGWL*LAEPVS
Trigger: CGACACAGGCTCTGCCAGCCACAACCATCCTGCTGC...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCTCAGAAGCAGCAGGATaGTTGTGGCTGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVSEAAG*LWLAEP
Trigger: AGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGA...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGTGCATCAAAGGGGCTaGCGTTGTTCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGVHQRG*RCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCAC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACGTGCATCAAAGGGGCTaGCGTTGTTCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHVHQRG*RCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCAC...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACTGCCCCAGACATGTTaGAGCGCCGGGCATAATAGA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKLPQTC*SAGHNR
Trigger: TCTATTATGCCCGGCGCTCCAACATGTCTGGGGCAG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCAAGCTGTGGGGCTTaGCGTCCCGCACTGAAACAT +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPSCGA*RPALKH
Trigger: ATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTCATGACGGTGCACATTaGACATGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELHDGAH*TCPAVP
Trigger: TGGCACTGCTGGGCATGTTCAATGTGCACCGTCATG...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAATTGGCCCAATGCACTaGGTTCACCACACTCCACGT +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKIGPMH*VHHTPR
Trigger: ACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAAT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMTTGSR*VQWRCK
Trigger: CTTGCATCTCCATTGCACTCACCTACTTCCAGTTGT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCAGGGACAGGAAAAATTaGGGTCAGGAACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSRDRKN*GQEPDS
Trigger: ACTGTCAGGTTCCTGACCTCAATTTTTCCTGTCCCT...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGLAHGL*PATVSG
Trigger: TCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGCAELS*MWHRIL
Trigger: GAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATAATGGCCTGGCGCAGCTaGTCCACCTGTGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIMAWRS*STCAEL
Trigger: CAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGCCAT...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCGTCATCACCAGAACCTaGAGAGGTGGTCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVVITRT*RGGLLI
Trigger: GATGAGGAGACCACCTCTGCAGGTTCTGGTGATGAC...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGGAACCATTGGCCCAATaGACTGAGTTCACCACACTC +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMEPLAQ*TEFTTL
Trigger: GAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTC...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTT +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGLGATG*IKGAGV
Trigger: AACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAGATGTAGTAAGACAAAGAAGAGGATaGCGTACAAAGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: DAVQSVLLPTPYCGKDVVRQRRG*RTKCTA
Trigger: AGCAGTACACTTTGTACGGCATCCTCTTCTTTGTCT...TACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTATTCAAGCTCAGTCCTaGTTGGGGATAGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGIQAQS*LGIGGT
Trigger: GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAAT...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATATTCAAGCTCAGTCCTaGTTGGGGATAGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNIQAQS*LGIGGT
Trigger: GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAAT...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GENSNSSAIQNSVHLEVNQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...GTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGTACAGTTCTTCAATaGCCTGGCGCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVSTVLQ*PGAAAP
Trigger: TGGAGCAGCTGCGCCAGGCCATTGAAGAACTGTACT...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATGGCACTGAAAGGCAGATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: PYCGKDVVQLHRDGTERQMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...CTGCCTTTCAGTGCCATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGEQTTV*GEAEDI
Trigger: GATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTC...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGPVSNH*PNALSS
Trigger: TGAACTCAGTGCATTGGGCCAATGGTTCGACACAGG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAGTGCATCAAAGGGGCTaGCGTTGTTCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEVHQRG*RCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCAC...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPGRCS*CDRVHQ
Trigger: TTGATGCACCCTGTCGCACCAAGAACATCGCCCGGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACGTTGGGTTAGGGTACTaGATGAGTAGGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHVGLGY*MSRDRK
Trigger: TTTCCTGTCCCTACTCATCCAGTACCCTAACCCAAC...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCATCCTTAAGGCAGTaGAACCTGTTTGGGGGAATC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSSLRQ*NLFGGI
Trigger: GATTCCCCCAAACAGGTTCCACTGCCTTAAGGATGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGCAGTGGAACCTGTTTaGGGGAATCCTGAGGTTATA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMAVEPV*GNPEVI
Trigger: TATAACCTCAGGATTCCCCCAAACAGGTTCCACTGC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVRLRLL*RIFSGQ
Trigger: CTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCT...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCACCTGTGCAGAACTaGGCTGCATGTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPPVQN*AACGTE
Trigger: TTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCTTGACGTCCCGCACTaGAACATTGGCAAATATAAT +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGLDVPH*NIGKYN
Trigger: ATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAG...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACATGACGGTGCACATTaGACATGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGHDGAH*TCPAVP
Trigger: TGGCACTGCTGGGCATGTTCAATGTGCACCGTCATG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCGAGTTAATGGCCCCATaGCGGTGCACATTGAACATG +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVELMAP*RCTLNM
Trigger: CATGTTCAATGTGCACCGTCATGGGGCCATTAACTC...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGAGAAGACATAACCAGTaGGTAAGGAGTAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMRRHNQ*VRSSRR
Trigger: TCTTCGGCTACTCCTTACTCACTGGTTATGTCTTCT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGAGTTCAACAGGGCATaGAGAAAGGGAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKEFNRA*RKGENS
Trigger: GCTGTTCTCTCCCTTTCTTCATGCCCTGTTGAACTC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAAGGGACAGGAAAAATTaGGGTCAGGAACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISERDRKN*GQEPDS
Trigger: ACTGTCAGGTTCCTGACCTCAATTTTTCCTGTCCCT...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCTCTGAATGGTACCACTaGACCAGGGATCAACGGGTT +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVSEWYH*TRDQRV
Trigger: AACCCGTTGATCCCTGGTTCAGTGGTACCATTCAGA...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGAACCATTGGCCCAATaGACTGAGTTCACCACACTC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKEPLAQ*TEFTTL
Trigger: GAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGRIGNH*QLQLRG
Trigger: CCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVQQYQD*QPLAAP
Trigger: TGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAACACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCTATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVYLVAV*QETTLL
Trigger: GAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAATATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKYLVAV*QETTLL
Trigger: GAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATA...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKPVSNH*PNALSS
Trigger: TGAACTCAGTGCATTGGGCCAATGGTTCGACACAGG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACCCGACCCCATACTGTaGCAAAGATGTAGTACAGCT +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKPDPIL*QRCSTA
Trigger: AGCTGTACTACATCTTTGCCACAGTATGGGGTCGGG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATAGCAGCAGGATGGTTGTaGCTGGCAGAGCCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIAAGWL*LAEPEK
Trigger: CTTCTCTGGCTCTGCCAGCCACAACCATCCTGCTGC...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCTTGACGTCCCGCACTaGAACATTGGCAAATATAAT +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGLDVPH*NIGKYN
Trigger: ATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCTTGACGTCCCGCACTaGAACATTGGCAAATATAAT +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMLDVPH*NIGKYN
Trigger: ATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGCTTGACGTCCCGCACTaGAACATTGGCAAATATAAT +
Preference number: 4 (lower is better)
Translates to: TGHEERERTAIVLPYRTQLDVPH*NIGKYN
Trigger: ATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAG...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTGCACACGCATTAGAATaGCAGCCACAAAACCCACCA +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELAHALE*QPQNPP
Trigger: TGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGC...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACATGACGGTGCACATTaGACATGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIHDGAH*TCPAVP
Trigger: TGGCACTGCTGGGCATGTTCAATGTGCACCGTCATG...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKTTGSR*VQWRCK
Trigger: CTTGCATCTCCATTGCACTCACCTACTTCCAGTTGT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTAGATGGTGCCCAGCATaGGGAAGAAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELRWCPA*GRRHNQ
Trigger: CTGGTTATGTCTTCTTCCTCATGCTGGGCACCATCT...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTGAGTTCAACAGGGCATaGAGAAAGGGAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELEFNRA*RKGENS
Trigger: GCTGTTCTCTCCCTTTCTTCATGCCCTGTTGAACTC...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAATCTGAATGGTACCACTaGACCAGGGATCAACGGGTT +
Preference number: 4 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGESEWYH*TRDQRV
Trigger: AACCCGTTGATCCCTGGTTCAGTGGTACCATTCAGA...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCTGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVCAELS*MWHRIL
Trigger: GAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACA...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGTRSQR*SRSGHT
Trigger: TGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGAACCATTGGCCCAATaGACTGAGTTCACCACACTC +
Preference number: 4 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGEEPLAQ*TEFTTL
Trigger: GAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTC...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCGTACAAAGTGTACTaGTCCCGACCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPYKVY*SRPHTV
Trigger: CACAGTATGGGGTCGGGAGCAGTACACTTTGTACGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACTGGAAGTAGGTGAGTaGAATGGAGATGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGLEVGE*NGDASP
Trigger: GGGGCTTGCATCTCCATTGCACTCACCTACTTCCAG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCTTCCACTTTATTCTTTaGCTGGCACAAAGAGGTATT +
Preference number: 4 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTFHFIL*LAQRGI
Trigger: AATACCTCTTTGTGCCAGGCAAAGAATAAAGTGGAA...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTCTCAGGGCAGCAGACTaGAAGCTGATAGTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELLRAAD*KLIVVV
Trigger: TACCACTACTATCAGCTTCCAGTCTGCTGCCCTGAG...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVRWKSK*VQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCT...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCCTCCAACAGTCATGTaGATGACAGTAGACTTGTAC +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNPPTVM*MTVDLY
Trigger: GTACAAGTCTACTGTCATCCACATGACTGTTGGAGG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCTTGACGTCCCGCACTaGAACATTGGCAAATATAAT +
Preference number: 4 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGLDVPH*NIGKYN
Trigger: ATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAGAGTTAATGGCCCCATaGCGGTGCACATTGAACATG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGELMAP*RCTLNM
Trigger: CATGTTCAATGTGCACCGTCATGGGGCCATTAACTC...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTACAACTGGAAGTAGGTaGGTGCAATGGAGATGCAAG +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELTTGSR*VQWRCK
Trigger: CTTGCATCTCCATTGCACTCACCTACTTCCAGTTGT...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAAGATGGTGCCCAGCATaGGGAAGAAGACATAACCAG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGRWCPA*GRRHNQ
Trigger: CTGGTTATGTCTTCTTCCTCATGCTGGGCACCATCT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCCATTTAATGATCTCTaGATGGTACCACTGAACCAG +
Preference number: 4 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMPFNDL*MVPLNQ
Trigger: CTGGTTCAGTGGTACCATTCAGAGATCATTAAATGG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACCGGATGAACTTCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: AIQNSVHLEVNIDIPDELHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...AAGTTCATCCGGTATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAACACAAAGCCCCGGATTaGCAAGTCATCTACCACAAA +
Preference number: 4 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGEHKAPD*QVIYHK
Trigger: TTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTG...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPVSNH*PNALSS
Trigger: TGAACTCAGTGCATTGGGCCAATGGTTCGACACAGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAGTGCATCAAAGGGGCTaGCGTTGTTCTTCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGVHQRG*RCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCAC...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR TCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATAAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIRLRLL*RIFSGQ
Trigger: CTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCT...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR GCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGATGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGCAELS*MWHRIL
Trigger: GAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACA...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAAGACAAAGAAGAGGATaGCGTACAAAGTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKRQRRG*RTKCTA
Trigger: AGCAGTACACTTTGTACGGCATCCTCTTCTTTGTCT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR GCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGELSCM*HRILFS
Trigger: GGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTC...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATACAGAGTCCTATCTTGTaGCTGTGTGGCAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIQSPIL*LCGRKP
Trigger: TGGTTTCCTGCCACACAGCCACAAGATAGGACTCTG...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGPWNSR*KSKWVQ
Trigger: CTGGACCCATTTGGACTTCCACCTAGAATTCCATGG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGQPLSP*SKSSPE
Trigger: TTCTGGTGATGACTTTGACCAGGGTGACAATGGCTG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGATCATCCTTAAGGCAGTaGAACCTGTTTGGGGGAATC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGSSLRQ*NLFGGI
Trigger: GATTCCCCCAAACAGGTTCCACTGCCTTAAGGATGA...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR TCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAAGAAGACATAACCAGTaGGTAAGGAGTAGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGRRHNQ*VRSSRR
Trigger: TCTTCGGCTACTCCTTACTCACTGGTTATGTCTTCT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGEIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp GAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACACGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: ERTAIVLPYRTQSILRLTRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...TGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAACTTTATTCTTTGCCTaGCACAAAGAGGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: HSSSVLLGDRRNHLMISETLFFA*HKEVFN
Trigger: GTTGAATACCTCTTTGTGCCAGGCAAAGAATAAAGT...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCTTCCACTTTATTCTTTaGCTGGCACAAAGAGGTATT +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVFHFIL*LAQRGI
Trigger: AATACCTCTTTGTGCCAGGCAAAGAATAAAGTGGAA...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGIIRSP*NSRWKS
Trigger: GGACTTCCACCTAGAATTCCATGGAGACCGAATTAT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGATGGACAACCAATaGATTTCCAGTGTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGMMDNQ*ISSVRG
Trigger: TCCTCGAACACTGGAAATCCATTGGTTGTCCATCAT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CCA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCACTTTATTCTTTGCCTaGCACAAAGAGGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVTLFFA*HKEVFN
Trigger: GTTGAATACCTCTTTGTGCCAGGCAAAGAATAAAGT...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR GCA 90 bp AGCAATAGTTCTGCCATACAGAACTCAGTCCATCTTGAGGTTAACATAGATATAAAGGGAAGGCAACAATaGCATCACACAATTCAGTCA +
Preference number: 4 (lower is better)
Translates to: SNSSAIQNSVHLEVNIDIKGRQQ*HHTIQS
Trigger: TGACTGAATTGTGTGATGGCATTGTTGCCTTCCCTT...TATATCTATGTTAACCTCAAGATGGACTGAGTTCTGTATGGCAGAACTATTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CCA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGACGGAAGACATCTGTATaGATAATTTTCCAGCCATTG +
Preference number: 4 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGRKTSV*IIFQPL
Trigger: CAATGGCTGGAAAATTATCCATACAGATGTCTTCCG...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS CCA 90 bp ACCCCACCCGCAGCCCGTCTGGCCCGGGGCCTCTACTACGCGCCCTaGCCCGTTTCCATGGCAACGCCGCTCGGTCTCGCACCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: TPPAARLARGLYYAP*PVSMATPLGLAPRV
Trigger: GACCCGAGGTGCGAGACCGAGCGGCGTTGCCATGGAAACGGGCCAGGGCGCGTAGTAGAGGCCCCGGGCCAGACGGGCTGCGGGTGGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CCA 90 bp CCCGTCTGGCCCGGGGCCTCTACTACGCGCCCTGGCCCGTTTCCATaGCAACGCCGCTCGGTCTCGCACCTCGGGTCCCTTCCCGCCACA +
Preference number: 5 (lower is better)
Translates to: PVWPGASTTRPGPFP*QRRSVSHLGSLPAT
Trigger: TGTGGCGGGAAGGGACCCGAGGTGCGAGACCGAGCGGCGTTGCCATGGAAACGGGCCAGGGCGCGTAGTAGAGGCCCCGGGCCAGACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS TCA 90 bp GAGGACCTGCCGACCGACTTCTACGGGGTTGCCCGTTGCTGCGCCTaGCAGCGGCGGCTGCGGCTACACCGCGCTGGACACCGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EDLPTDFYGVARCCA*QRRLRLHRAGHRSG
Trigger: GCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 90 bp GTAGCGGCGGGTTGGAGAGGACCTGCCGACCGACTTCTACGGGGTTaGCCGTTGCTGCGCCTGACAGCGGCGGCTGCGGCTACACCGCGC +
Preference number: 5 (lower is better)
Translates to: VAAGWRGPADRLLRG*PLLRLTAAAAATPR
Trigger: GCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 90 bp GGGTCTCTCCCACAGCGGCGCGGTAGCGGCGGGTTGGAGAGGACCTaGCGACCGACTTCTACGGGGTTGCCCGTTGCTGCGCCTGACAGC +
Preference number: 5 (lower is better)
Translates to: GSLPQRRGSGGLERT*RPTSTGLPVAAPDS
Trigger: GCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCGCCGCTGTGGGAGAGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CCA 90 bp GGCTCCTGCTGGGGTCTCTCCCACAGCGGCGCGGTAGCGGCGGGTTaGAGAGGACCTGCCGACCGACTTCTACGGGGTTGCCCGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GSCWGLSHSGAVAAG*RGPADRLLRGCPLL
Trigger: CAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCGCCGCTGTGGGAGAGACCCCAGCAGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CCA 90 bp CGCCTGACAGCGGCGGCTGCGGCTACACCGCGCTGGACACCGCTCTaGCTTACTCAAGAACTCCCCGTTGCGCCTTCTCCATCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: RLTAAAAATPRWTPL*LTQELPVAPSPSGG
Trigger: GCCTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000643382.1
ENST00000643885.1
ENST00000646500.1
CDS CCA 90 bp TGCCCGTTGCTGCGCCTGACAGCGGCGGCTGCGGCTACACCGCGCTaGACACCGCTCTGGCTTACTCAAGAACTCCCCGTTGCGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CPLLRLTAAAAATPR*TPLWLTQELPVAPS
Trigger: AGAAGGCGCAACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 90 bp CCGACTTCTACGGGGTTGCCCGTTGCTGCGCCTGACAGCGGCGGCTaGGGCTACACCGCGCTGGACACCGCTCTGGCTTACTCAAGAACT +
Preference number: 5 (lower is better)
Translates to: PTSTGLPVAAPDSGG*GYTALDTALAYSRT
Trigger: AGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 90 bp CGGCCTTGTAGTGTGTCACGCCTTCCACCCCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGATTGGCAACCACTGGCAGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: RPCSVSRLPPLAHGL*PATVSGLATTGSSN
Trigger: GTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAGGGGTGGAAGGCGTGACACACTACAAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 90 bp GCCATTCGGTCCCCATCCAGCACTTCACCCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAGCAGACTGGAAGCGCGCGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: AIRSPSSTSPRLRLL*RIFSGQQTGSAREG
Trigger: CCCTTCCCGCGCGCTTCCAGTCTGCTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCTGGGTGAAGTGCTGGATGGGGACCGAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524835.5
ENST00000643885.1
CDS CCA 90 bp CAGAGATGGCACAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTGTTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: QRWHRAGVESPGRCS*CDRVHQRGWRCSSQ
Trigger: TTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGTGCCATCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CAA 90 bp GGCCGGTGGAGCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GRWSQHSAQIATTSGNPPVQSPI*WLCGRK
Trigger: TTTCCTGCCACACAGCCACAAGATAGGACTCTGGAC...GGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGCTCCACCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCCTCCACTTGCTCCCATaGGCCCCCTCCCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: IISRPSLGKECPKGKREGLHLLP*APSPPH
Trigger: GTGAGGCGGGGAGGGGGCCAATGGGAGCAAGTGGAG...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS GCA 90 bp GGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTTGTTCTTCCCAAAGATGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: GLGWNLPGDVLGATG*IKGAGVVLPKDASN
Trigger: ATTGGAGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 90 bp AGATGGCACAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGGGGCTGGCGTTGTTCTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: RWHRAGVESPGRCSW*DRVHQRGWRCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGTGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CCA 90 bp TTCCACCCCTGGCCCATGGCCTGTGCCCAGCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCAACTTCGAGGGTTCCCTACGACTGT +
Preference number: 5 (lower is better)
Translates to: FHPWPMACAQQQYQD*QPLAAPTSRVPYDC
Trigger: ACAGTCGTAGGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAGGGGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp AATAACAGGGTCGCCGGCCTTGTAGTGTGTCACGCCTTCCACCCCTaGCCCATGGCCTGTGCCCAGCAACAGTATCAGGATTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: NNRVAGLVVCHAFHP*PMACAQQQYQDWQP
Trigger: TGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAGGGGTGGAAGGCGTGACACACTACAAGGCCGGCGACCCTGTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 90 bp GCCATTCGGTCCCCATCCAGCACTTCACCCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAGCAGACTGGAAGCTCGGGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: AIRSPSSTSPRLRLL*RIFSGQQTGSSGPF
Trigger: GAAGGGACCCGAGCTTCCAGTCTGCTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCTGGGTGAAGTGCTGGATGGGGACCGAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530563.1
ENST00000644349.1
CDS GCA 90 bp ACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGGGGCTGGCGTTGTTCTTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: TCTRAGVESPGRCSW*DRVHQRGWRCSSQR
Trigger: TCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000529332.5
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp GAAAGCCCACCAGCAGCCAAACCGTCAGAAGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCGAACCATTGGCCCAATGCACTGAGT +
Preference number: 5 (lower is better)
Translates to: ESPPAAKPSEAAGWL*LAEPVSNHWPNALS
Trigger: ACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGACGGTTTGGCTGCTGGTGGGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp ATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTCCAAGCTGTGGGGCTaGACGTCCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: MWMTVDLYQGWGGISRAMSKLWG*TSRTET
Trigger: TGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGA...CATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS CCA 90 bp GGCCCATGGCCTGTGCCCAGCAACAGTATCAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGGTTCCCTACGACTGTCATCCTTAAG +
Preference number: 5 (lower is better)
Translates to: GPWPVPSNSIRIGNH*QLQLRGFPTTVILK
Trigger: CTTAAGGATGACAGTCGTAGGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp TGTTCCACACCCAACGCTCGCCTCCAATCTGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGCAGCAGGTCAGGGCATACAACAAGA +
Preference number: 5 (lower is better)
Translates to: CSTPNARLQSAGRSG*TRSQRCSRSGHTTR
Trigger: TCTTGTTGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGCAGATTGGAGGCGAGCGTTGGGTGTGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAA +
Preference number: 5 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLPQSPG*ASHLPQ
Trigger: TTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGG...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACTCCAAGCTGTGGGGCTaGACGTCCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: ILPRQLEVGECNGDASPHSKLWG*TSRTET
Trigger: TGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGA...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: IISRPSLGKECPKGKREGSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CTCCACAGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: LHRDGTERQEASNSHVDDSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...GTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: MWMTVDLYQGWGGISRAMWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...CATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCCTACGGGGTTGCCCGTaGCTGCGCCTGACAGCGGCG +
Preference number: 5 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSLRGCP*LRLTAA
Trigger: CGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAG...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCGCGGTAGCGGCGGGTaGGAGAGGACCTGCCGACCG +
Preference number: 5 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGRGSGG*ERTCRP
Trigger: CGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS TCA 90 bp GGTTGTGGCTGGCAGAGCCTGTGTCGAACCATTGGCCCAATGCACTaGGTTCACCACACTCCACGTCAGGAAGAAAGGCACAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GCGWQSLCRTIGPMH*VHHTPRQEERHREE
Trigger: CTCTTCTCTGTGCCTTTCTTCCTGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 90 bp AGGATGGTTGTGGCTGGCAGAGCCTGTGTCGAACCATTGGCCCAATaGACTGAGTTCACCACACTCCACGTCAGGAAGAAAGGCACAGAG +
Preference number: 5 (lower is better)
Translates to: RMVVAGRACVEPLAQ*TEFTTLHVRKKGTE
Trigger: CTCTGTGCCTTTCTTCCTGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp GAAGCAGCAGGATGGTTGTGGCTGGCAGAGCCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCACCACACTCCACGTCAGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: EAAGWLWLAEPVSNH*PNALSSPHSTSGRK
Trigger: CTTTCTTCCTGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGATVSG*ATTGSS
Trigger: GGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGC...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp GGCCGGTGGAGCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCTCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: GRWSQHSAQIATTSGNPPSRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...GGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGCTCCACCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATCTACGGGGTTGCCCGTaGCTGCGCCTGACAGCGGCG +
Preference number: 5 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNLRGCP*LRLTAA
Trigger: CGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAG...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS TCA 90 bp GTAGCCAGAGATGCAGCAGGTCAGGGCATACAACAAGATGGCTGCTaGGTTAATGGCCCCATGACGGTGCACATTGAACATGCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VARDAAGQGIQQDGC*VNGPMTVHIEHAQQ
Trigger: CTGCTGGGCATGTTCAATGTGCACCGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTGTATGCCCTGACCTGCTGCATCTCTGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp GAACTGGGCACCCACGCCAAGCACAGCACAGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATCTGTATGGATAATTTTCCAGCCATT +
Preference number: 5 (lower is better)
Translates to: ELGTHAKHSTEQTTV*GEAEDICMDNFPAI
Trigger: AATGGCTGGAAAATTATCCATACAGATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTCTGTGCTGTGCTTGGCGTGGGTGCCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp TCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTaGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTGCATCAAA +
Preference number: 5 (lower is better)
Translates to: SNSHVDDSRLVPGLG*NLPGDVLGATGCIK
Trigger: TTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000529332.5
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp AGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTaGCAAAGATGTAGTACAGCTCCACAGAGATGGCACAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RRGCRTKCTAPDPIL*QRCSTAPQRWHRAG
Trigger: CCCAGCCCTGTGCCATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CCA 90 bp TGTACCAGGGCTGTGCCCAGCAACAGTATCAGGATTGGCAACCACTaGCAGCTCCAACTTCGAGGGTTCCCTACGACTGTCATCCTTAAG +
Preference number: 5 (lower is better)
Translates to: CTRAVPSNSIRIGNH*QLQLRGFPTTVILK
Trigger: CTTAAGGATGACAGTCGTAGGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGCCCTGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532632.1
ENST00000644476.1
CDS CCA 90 bp ACAGTAGACTTGTACCAGGGCTGTGCCCAGCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCAACTTCGAGGGTTCCCTACGACTGT +
Preference number: 5 (lower is better)
Translates to: TVDLYQGCAQQQYQD*QPLAAPTSRVPYDC
Trigger: ACAGTCGTAGGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGCCCTGGTACAAGTCTACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532632.1
ENST00000644476.1
CDS-3UTR CAA 90 bp CAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACTTGTACCAGGGCTGGGGTCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: QEASNSHVDDSRLVPGLGSKGLA*FFPKMP
Trigger: AGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGA...CCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: IISRPSLGKECPKGKREGWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCCGACTTCTACGGGGTaGCCCGTTGCTGCGCCTGAC +
Preference number: 5 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHPTSTG*PVAAPD
Trigger: GTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAACGCGGTAGCGGCGGGTaGGAGAGGACCTGCCGACCG +
Preference number: 5 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGERGSGG*ERTCRP
Trigger: CGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCG...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRACVEP*AQCTEF
Trigger: GAACTCAGTGCATTGGGCCAATGGTTCGACACAGGC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CAA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAACTCCACTTGCTCCCATaGGCCCCCTCCCCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKLHLLP*APSPPH
Trigger: GTGAGGCGGGGAGGGGGCCAATGGGAGCAAGTGGAG...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CCA 90 bp TGGGTAAGGCCTAGGAACTCGTCAGGTCGTAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACTGAAACATTGGCAAATATAATTCGG +
Preference number: 5 (lower is better)
Translates to: WVRPRNSSGRNPSKL*GLTSRTETLANIIR
Trigger: CCGAATTATATTTGCCAATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTTACGACCTGACGAGTTCCTAGGCCTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp AGCCATTGTCACCCTGGTCAAAGTCATCACCAGAACCTGCAGAGGTaGTCTCCTCATCTAAGTTGTACCGAGCCAGGTCATTCCGAAGCA +
Preference number: 5 (lower is better)
Translates to: SHCHPGQSHHQNLQR*SPHLSCTEPGHSEA
Trigger: TGCTTCGGAATGACCTGGCTCGGTACAACTTAGATGAGGAGACCACCTCTGCAGGTTCTGGTGATGACTTTGACCAGGGTGACAATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRVQSPI*WLCGRK
Trigger: TTTCCTGCCACACAGCCACAAGATAGGACTCTGGAC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCATCCAAGCTGTGGGGCTaGACGTCCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: RKVKGEMSPESFISETLSSKLWG*TSRTET
Trigger: TGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGA...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTC +
Preference number: 5 (lower is better)
Translates to: IISRPSLGKECPKGKREGVSSSK*YRARSF
Trigger: GAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp GCCAACACTCAGCACAGATCGCCACCACCAGCGGTAATCCTCCCCAGACAACTGATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ANTQHRSPPPAVILPRQLIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...CAGTTGTCTGGGGAGGATTACCGCTGGTGGTGGCGATCTGTGCTGAGTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp AAAGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAATGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: KEEDAVQSVLLPTPYCGKWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...TTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCCCGACTTCTACGGGGTaGCCCGTTGCTGCGCCTGAC +
Preference number: 5 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVPTSTG*PVAAPD
Trigger: GTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGG...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS TCA 90 bp CAGGTCAGGGCATACAACAAGATGGCTGCTGAGTTAATGGCCCCATaGCGGTGCACATTGAACATGCCCAGCAGTGCCATGACAATAATG +
Preference number: 5 (lower is better)
Translates to: QVRAYNKMAAELMAP*RCTLNMPSSAMTIM
Trigger: CATTATTGTCATGGCACTGCTGGGCATGTTCAATGTGCACCGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTGTATGCCCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp CGAGGGTTCCCTACGACTGTCATCCTTAAGGCAGTGGAACCTGTTTaGGGGAATCCTGAGGTTATAGAAACCAGGGAGGTTACAGAAACC +
Preference number: 5 (lower is better)
Translates to: RGFPTTVILKAVEPV*GNPEVIETREVTET
Trigger: GGTTTCTGTAACCTCCCTGGTTTCTATAACCTCAGGATTCCCCCAAACAGGTTCCACTGCCTTAAGGATGACAGTCGTAGGGAACCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS-3UTR CAA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGATVSG*ATTGSS
Trigger: GGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp AGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGACCACAAAGCCCCGGATaGGCAAGTCATCTACCACAA +
Preference number: 5 (lower is better)
Translates to: RDGTERQEASNSHVDDSRPQSPG*ASHLPQ
Trigger: TTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGG...TCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGTCCAAGCTGTGGGGCTaGACGTCCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMSKLWG*TSRTET
Trigger: TGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGA...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: IISRPSLGKECPKGKREGTSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTC +
Preference number: 5 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRVSSSK*YRARSF
Trigger: GAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp AGGAAGGTGAAGGGGGAAATGTCTCCGGAGAGCTTTATAAGTGAGACACTCTCAGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: RKVKGEMSPESFISETLSACVEP*AQCTEF
Trigger: GAACTCAGTGCATTGGGCCAATGGTTCGACACAGGC...TGAGAGTGTCTCACTTATAAAGCTCTCCGGAGACATTTCCCCCTTCACCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGACVEP*AQCTEF
Trigger: GAACTCAGTGCATTGGGCCAATGGTTCGACACAGGC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CCATACTGTGGCAAAGATGTAGTACAGCTCCACAGAGATGGCACTGAAAGGCAGTCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: PYCGKDVVQLHRDGTERQSKGLA*FFPKMP
Trigger: AGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGA...CTGCCTTTCAGTGCCATCTCTGTGGAGCTGTACTACATCTTTGCCACAGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCTCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTSKGLA*FFPKMP
Trigger: AGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGA...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCTCAAGAACTCCCCGTaGCGCCTTCTCCATCTGGAG +
Preference number: 5 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHLKNSP*RLLHLE
Trigger: CTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSATVSG*ATTGSS
Trigger: GGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGC...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMATVSG*ATTGSS
Trigger: GGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGATVSG*ATTGSS
Trigger: GGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGC...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp ATCCTCCCCAGACAACTGGAAGTAGGTGAGTGCAATGGAGATGCAAGCCCCCACTCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: ILPRQLEVGECNGDASPHSRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...GTGGGGGCTTGCATCTCCATTGCACTCACCTACTTCCAGTTGTCTGGGGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATCCAAGCTGTGGGGCTaGACGTCCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: HSSSVLLGDRRNHLMISESKLWG*TSRTET
Trigger: TGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGA...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMACVEP*AQCTEF
Trigger: GAACTCAGTGCATTGGGCCAATGGTTCGACACAGGC...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000642799.1
ENST00000646762.2
CDS-3UTR CAA 90 bp ATGGGTCATCAAATGGGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: MGHQMGFKPHMMSIGIKVSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...GACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCCCATTTGATGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGCTCAAGAACTCCCCGTaGCGCCTTCTCCATCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSYHSSSVLLGDRRNHLMLKNSP*RLLHLE
Trigger: CTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAG...CATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAA +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMPQSPG*ASHLPQ
Trigger: TTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGG...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAA +
Preference number: 5 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGPQSPG*ASHLPQ
Trigger: TTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGG...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAA +
Preference number: 5 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHPQSPG*ASHLPQ
Trigger: TTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGG...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATGGTACCACGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SVLLGDRRNHLMISEWYHVQSPI*WLCGRK
Trigger: TTTCCTGCCACACAGCCACAAGATAGGACTCTGGAC...GTGGTACCATTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAATCCAAGCTGTGGGGCTaGACGTCCCGCACTGAAACA +
Preference number: 5 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKSKLWG*TSRTET
Trigger: TGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGA...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp AAAGAAGAGGATGCCGTACAAAGTGTACTGCTCCCGACCCCATACTGTGGCAAAACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: KEEDAVQSVLLPTPYCGKTSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...TTTGCCACAGTATGGGGTCGGGAGCAGTACACTTTGTACGGCATCCTCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp AGAGATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTGGATGACAGTAGAACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: RDGTERQEASNSHVDDSRTSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...TCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTTSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTC +
Preference number: 5 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGVSSSK*YRARSF
Trigger: GAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp ATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGCATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: IISRPSLGKECPKGKREGIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...GCCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: HSSSVLLGDRRNHLMISEACVEP*AQCTEF
Trigger: GAACTCAGTGCATTGGGCCAATGGTTCGACACAGGC...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSKGLA*FFPKMP
Trigger: AGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTTGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS TCA 90 bp CTAAGTTGTACCGAGCCAGGTCATTCCGAAGCACACGCATTAGAATaGCAGCCACAAAACCCACCAGTAAAAACACAAGCACCATGGAGT +
Preference number: 5 (lower is better)
Translates to: LSCTEPGHSEAHALE*QPQNPPVKTQAPWS
Trigger: ACTCCATGGTGCTTGTGTTTTTACTGGTGGGTTTTGTGGCTGTCATTCTAATGCGTGTGCTTCGGAATGACCTGGCTCGGTACAACTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 90 bp CAACGGGTTGGGTTAGGGTACTGGATGAGTAGGGACAGGAAAAATTaGGGTCAGGAACCTGACAGTAATAGCCATGGAATAAAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: QRVGLGYWMSRDRKN*GQEPDSNSHGIKGG
Trigger: TCCTCCCTTTATTCCATGGCTATTACTGTCAGGTTCCTGACCTCAATTTTTCCTGTCCCTACTCATCCAGTACCCTAACCCAACCCGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS CCA 90 bp GCAAATATAATTCGGTCTCCATGGAATTCTAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTGTGGCTGTGTGGCAGGAAACCACTC +
Preference number: 5 (lower is better)
Translates to: ANIIRSPWNSRWKSK*VQSPILWLCGRKPL
Trigger: GAGTGGTTTCCTGCCACACAGCCACAAGATAGGACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAATTATATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp AAGCGGAAGACATCTGTATGGATAATTTTCCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAACCTGCAGAGGTGGTCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: KRKTSVWIIFQPLSP*SKSSPEPAEVVSSS
Trigger: AGATGAGGAGACCACCTCTGCAGGTTCTGGTGATGACTTTGACCAGGGTGACAATGGCTGGAAAATTATCCATACAGATGTCTTCCGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAA +
Preference number: 5 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGPQSPG*ASHLPQ
Trigger: TTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNVQSPI*WLCGRK
Trigger: TTTCCTGCCACACAGCCACAAGATAGGACTCTGGAC...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGCAAAAGGGAAGGATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: YNFQALSGEGMPKGQKGRIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...CCTTCCCTTTTGCCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: HSSSVLLGDRRNHLMISESKGLA*FFPKMP
Trigger: AGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGA...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGATCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGSRAMF*VRQGAS
Trigger: TGATGCACCCTGTCGCACCAAGAACATCGCCCGGGA...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAATGGATGACAGTAGACTaGTACCAGGGCTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKWMTVD*YQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCA...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261789.9
ENST00000529332.5
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp GGCTTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTCAAGCTCAGTCCTGCTaGGGGATAGGAGGAACCATT +
Preference number: 5 (lower is better)
Translates to: GFKPHMMSIGIKVRNQEGQAQSC*GIGGTI
Trigger: AATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTG...ACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS CCA 90 bp TGGCAGGAAACCACTCTCCTCCATGTAGCCCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAATTCAAAGTAGTACAGTTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: WQETTLLHVAHKAPD*QVIYHKFKVVQFFN
Trigger: ATTGAAGAACTGTACTACTTTGAATTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGGGCTACATGGAGGAGAGTGGTTTCCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp ACCAGTAAAAACACAAGCACCATGGAGTTGATGATGGACAACCAATaGATTTCCAGTGTTCGAGGAAAGAAACCACCATCGTCACCACGG +
Preference number: 5 (lower is better)
Translates to: TSKNTSTMELMMDNQ*ISSVRGKKPPSSPR
Trigger: CCGTGGTGACGATGGTGGTTTCTTTCCTCGAACACTGGAAATCCATTGGTTGTCCATCATCAACTCCATGGTGCTTGTGTTTTTACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKVQSPI*WLCGRK
Trigger: TTTCCTGCCACACAGCCACAAGATAGGACTCTGGAC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGTSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTC +
Preference number: 5 (lower is better)
Translates to: HMMSIGIKVRNQEGEGGNVSSSK*YRARSF
Trigger: GAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC...ATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp GTGAGACACTCTCATATCATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: VRHSHIIQAQSCLGIGGTIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAATCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKSKGLA*FFPKMP
Trigger: AGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGA...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS CCA 90 bp ACTGAAACATTGGCAAATATAATTCGGTCTCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAGAGTCCTATCTTGTGGCTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TETLANIIRSPWNSR*KSKWVQSPILWLCG
Trigger: GCCACACAGCCACAAGATAGGACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAATTATATTTGCCAATGTTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 90 bp TTGACGTCCCGCACTGAAACATTGGCAAATATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCCAAATGGGTCCAGAGTCCTATCTTG +
Preference number: 5 (lower is better)
Translates to: LTSRTETLANIIRSP*NSRWKSKWVQSPIL
Trigger: CAAGATAGGACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAATTATATTTGCCAATGTTTCAGTGCGGGACGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS-3UTR CAA 90 bp GTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGGGTCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: VIEIYNFQALSGEGMPKGSRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...CCCTTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAAACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: HSSSVLLGDRRNHLMISETSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAATGCCCAAAGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTC +
Preference number: 5 (lower is better)
Translates to: YVIEIYNFQALSGEGMPKVSSSK*YRARSF
Trigger: GAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC...TTTGGGCATTCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAACAAGCTCAGTCCTGCTaGGGGATAGGAGGAACCATT +
Preference number: 5 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGEQAQSC*GIGGTI
Trigger: AATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTG...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGVQSPI*WLCGRK
Trigger: TTTCCTGCCACACAGCCACAAGATAGGACTCTGGAC...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGTCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMSRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp CATCACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCTCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: HHTIQSIRREAGRRVQQGSRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...GCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTC +
Preference number: 5 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGEVSSSK*YRARSF
Trigger: GAATGACCTGGCTCGGTACAACTTAGATGAGGAGAC...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp ACAGGGCATGAAGAAAGGGAGAGAACAGCAATAGTTCTGCCATACAGAACTCAGATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: TGHEERERTAIVLPYRTQIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...CTGAGTTCTGTATGGCAGAACTATTGCTGTTCTCTCCCTTTCTTCATGCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS-3UTR CAA 90 bp CACACAATTCAGTCAATCAGAAGAGAAGCTGGTAGGAGAGTTCAACAGGGCATGATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: HTIQSIRREAGRRVQQGMIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...CATGCCCTGTTGAACTCTCCTACCAGCTTCTCTTCTGATTGACTGAATTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp ATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAAGGGGGAAATGTCTCCATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: MSIGIKVRNQEGEGGNVSIIFQP*SPWSKS
Trigger: TGACTTTGACCAGGGTGACAATGGCTGGAAAATTAT...GGAGACATTTCCCCCTTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp CATTCAAGCTCAGTCCTGCTTGGGGATAGGAGGAACCATTTAATGATCTCTGAATCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: HSSSVLLGDRRNHLMISESRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...TTCAGAGATCATTAAATGGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS-3UTR CAA 90 bp TATAATCCTTATGTGATAGAGATTTATAATTTCCAGGCCCTCTCTGGGGAAGGAACAAGCACCATGGAGTaGATGATGGACAACCAATGG +
Preference number: 5 (lower is better)
Translates to: YNPYVIEIYNFQALSGEGTSTME*MMDNQW
Trigger: CCATTGGTTGTCCATCATCAACTCCATGGTGCTTGT...TCCTTCCCCAGAGAGGGCCTGGAAATTATAAATCTCTATCACATAAGGATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000646762.2
CDS-3UTR CAA 90 bp TTTAAACCCCACATGATGTCCATAGGCATTAAAGTCAGAAACCAGGAAGGTGAATCCCGCACTGAAACATaGGCAAATATAATTCGGTCT +
Preference number: 5 (lower is better)
Translates to: FKPHMMSIGIKVRNQEGESRTET*ANIIRS
Trigger: AGACCGAATTATATTTGCCAATGTTTCAGTGCGGGA...TTCACCTTCCTGGTTTCTGACTTTAATGCCTATGGACATCATGTGGGGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS CCA 72 bp CGGCGCCAGCGGCCTTCGCGCCCCCGTAGCTGCCTTTaGGCTCCTGCTGGGGTCTCTCCCACAGCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: RRQRPSRPRSCL*APAGVSPTAAR
Trigger: CCGCGCCGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGAAGGCCGCTGGCGCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000529332.5
ENST00000530468.5
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 72 bp CCGAGGCGGCGCCAGCGGCCTTCGCGCCCCCGTAGCTaGCTTTGGGCTCCTGCTGGGGTCTCTCCCACAGCG +
Preference number: 6 (lower is better)
Translates to: PRRRQRPSRPRS*LWAPAGVSPTA
Trigger: CGCTGTGGGAGAGACCCCAGCAGGAGCCCAAAGGCAGCTACGGGGGCGCGAAGGCCGCTGGCGCCGCCTCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000529332.5
ENST00000530468.5
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp GTGGAACCTGTTTGGGGGAATCCGCGCGGGAAGGGCTaGCCGAGGCGGCGCCAGCGGCCTTCGCGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: VEPVWGNPRGKG*PRRRQRPSRPR
Trigger: ACGGGGGCGCGAAGGCCGCTGGCGCCGCCTCGGCCAGCCCTTCCCGCGCGGATTCCCCCAAACAGGTTCCAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000528010.1
ENST00000532632.1
ENST00000643382.1
ENST00000644476.1
CDS CCA 72 bp GTCATCCTTAAGGCAGTGGAACCGCGCGGGAAGGGCTaGCCGAGGCGGCGCCAGCGGCCTTCGCGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: VILKAVEPRGKG*PRRRQRPSRPR
Trigger: ACGGGGGCGCGAAGGCCGCTGGCGCCGCCTCGGCCAGCCCTTCCCGCGCGGTTCCACTGCCTTAAGGATGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000529332.5
ENST00000642990.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp GCAGCCCGTCTGGCCCGGGGCCTCTACTACGCGCCCTaGCCCGTTTCCATGGCAACGCCGCTCGGTCTCGCA +
Preference number: 6 (lower is better)
Translates to: AARLARGLYYAP*PVSMATPLGLA
Trigger: TGCGAGACCGAGCGGCGTTGCCATGGAAACGGGCCAGGGCGCGTAGTAGAGGCCCCGGGCCAGACGGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CAA 90 bp GGTAGCGGCGGGTTGGAGAGGACCTGCCGACCGACTTCTACGGGGTaGCCCGTTGCTGCGCCTGACAGCGGCGGCTGCGGCTACACCGCG +
Preference number: 6 (lower is better)
Translates to: GSGGLERTCRPTSTG*PVAAPDSGGCGYTA
Trigger: CGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS TCA 72 bp CCGACCGACTTCTACGGGGTTGCCCGTTGCTGCGCCTaGCAGCGGCGGCTGCGGCTACACCGCGCTGGACAC +
Preference number: 6 (lower is better)
Translates to: PTDFYGVARCCA*QRRLRLHRAGH
Trigger: GTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 72 bp ACGGGGTTGCCCGTTGCTGCGCCTGACAGCGGCGGCTaGGGCTACACCGCGCTGGACACCGCTCTGGCTTAC +
Preference number: 6 (lower is better)
Translates to: TGLPVAAPDSGG*GYTALDTALAY
Trigger: GTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 72 bp CCACAGCGGCGCGGTAGCGGCGGGTTGGAGAGGACCTaGCGACCGACTTCTACGGGGTTGCCCGTTGCTGCG +
Preference number: 6 (lower is better)
Translates to: PQRRGSGGLERT*RPTSTGLPVAA
Trigger: CGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCGCCGCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CCA 72 bp CCCGGGGCCTCTACTACGCGCCCTGGCCCGTTTCCATaGCAACGCCGCTCGGTCTCGCACCTCGGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: PGASTTRPGPFP*QRRSVSHLGSL
Trigger: AAGGGACCCGAGGTGCGAGACCGAGCGGCGTTGCCATGGAAACGGGCCAGGGCGCGTAGTAGAGGCCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CAA 72 bp GGGTTGGAGAGGACCTGCCGACCGACTTCTACGGGGTaGCCCGTTGCTGCGCCTGACAGCGGCGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: GLERTCRPTSTG*PVAAPDSGGCG
Trigger: GCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CAA 90 bp GCGGGTTGGAGAGGACCTGCCGACCGACTTCTACGGGGTTGCCCGTaGCTGCGCCTGACAGCGGCGGCTGCGGCTACACCGCGCTGGACA +
Preference number: 6 (lower is better)
Translates to: AGWRGPADRLLRGCP*LRLTAAAAATPRWT
Trigger: TGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CAA 90 bp GGGCTCCTGCTGGGGTCTCTCCCACAGCGGCGCGGTAGCGGCGGGTaGGAGAGGACCTGCCGACCGACTTCTACGGGGTTGCCCGTTGCT +
Preference number: 6 (lower is better)
Translates to: GLLLGSLPQRRGSGG*ERTCRPTSTGLPVA
Trigger: AGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCGCCGCTGTGGGAGAGACCCCAGCAGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 72 bp GGTTGGAGAGGACCTGCCGACCGACTTCTACGGGGTTaGCCGTTGCTGCGCCTGACAGCGGCGGCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: GWRGPADRLLRG*PLLRLTAAAAA
Trigger: AGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CCA 72 bp TGGGGTCTCTCCCACAGCGGCGCGGTAGCGGCGGGTTaGAGAGGACCTGCCGACCGACTTCTACGGGGTTGC +
Preference number: 6 (lower is better)
Translates to: WGLSHSGAVAAG*RGPADRLLRGC
Trigger: GCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCGCCGCTGTGGGAGAGACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CAA 72 bp AGAGGACCTGCCGACCGACTTCTACGGGGTTGCCCGTaGCTGCGCCTGACAGCGGCGGCTGCGGCTACACCG +
Preference number: 6 (lower is better)
Translates to: RGPADRLLRGCP*LRLTAAAAATP
Trigger: CGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAGCAACGGGCAACCCCGTAGAAGTCGGTCGGCAGGTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CAA 72 bp CTGGGGTCTCTCCCACAGCGGCGCGGTAGCGGCGGGTaGGAGAGGACCTGCCGACCGACTTCTACGGGGTTG +
Preference number: 6 (lower is better)
Translates to: LGSLPQRRGSGG*ERTCRPTSTGL
Trigger: CAACCCCGTAGAAGTCGGTCGGCAGGTCCTCTCCAACCCGCCGCTACCGCGCCGCTGTGGGAGAGACCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CAA 90 bp CTACACCGCGCTGGACACCGCTCTGGCTTACTCAAGAACTCCCCGTaGCGCCTTCTCCATCTGGAGGCCCGGCCCAGCTCCGGGGACCCC +
Preference number: 6 (lower is better)
Translates to: LHRAGHRSGLLKNSP*RLLHLEARPSSGDP
Trigger: GGGGTCCCCGGAGCTGGGCCGGGCCTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000643885.1
ENST00000646500.1
CDS CCA 72 bp GCGGCGGCTGCGGCTACACCGCGCTGGACACCGCTCTaGCTTACTCAAGAACTCCCCGTTGCGCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: AAAAATPRWTPL*LTQELPVAPSP
Trigger: TGGAGAAGGCGCAACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS CCA 72 bp CTGCGCCTGACAGCGGCGGCTGCGGCTACACCGCGCTaGACACCGCTCTGGCTTACTCAAGAACTCCCCGTT +
Preference number: 6 (lower is better)
Translates to: LRLTAAAAATPR*TPLWLTQELPV
Trigger: AACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGCGCGGTGTAGCCGCAGCCGCCGCTGTCAGGCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000528010.1
ENST00000530468.5
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000646500.1
CDS GCA 72 bp CTGGACACCGCTCTGGCTTACTCAAGAACTCCCCGTTaGGCCTTCTCCATCTGGAGGCCCGGCCCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: LDTALAYSRTPR*AFSIWRPGPAP
Trigger: CGGAGCTGGGCCGGGCCTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000643885.1
ENST00000646500.1
CDS CAA 72 bp GCTGGACACCGCTCTGGCTTACTCAAGAACTCCCCGTaGCGCCTTCTCCATCTGGAGGCCCGGCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AGHRSGLLKNSP*RLLHLEARPSS
Trigger: GGAGCTGGGCCGGGCCTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAGTAAGCCAGAGCGGTGTCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396854.8
ENST00000524835.5
ENST00000643885.1
ENST00000646500.1
CDS CAA 72 bp GCACAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: AQGWGGISRAMF*VRQGASKGLAL
Trigger: CAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS TCA 72 bp GGAGGTTACAGAAACCCCAGGTCAGGTGCCTCGAACTaGGGTCCCCTGGCTCCACTTGCTCCCATTGGCCCC +
Preference number: 6 (lower is better)
Translates to: GGYRNPRSGASN*GPLAPLAPIGP
Trigger: GGGGCCAATGGGAGCAAGTGGAGCCAGGGGACCTCAGTTCGAGGCACCTGACCTGGGGTTTCTGTAACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CCA 72 bp ACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTGT +
Preference number: 6 (lower is better)
Translates to: TRAGVESPGRCS*CDRVHQRGWRC
Trigger: ACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000529332.5
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CACAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTaGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTGT +
Preference number: 6 (lower is better)
Translates to: HRAGVESPGRCS*CDRVHQRGWRC
Trigger: ACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CAA 72 bp TACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: YQGWGGISRAMF*VRQGASKGLAL
Trigger: CAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000529332.5
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 72 bp AGTGTGTCACGCCTTCCACCCCTGGCCCATGGCCTGTaGCCAGCAACAGTATCAGGATTGGCAACCACTGGC +
Preference number: 6 (lower is better)
Translates to: SVSRLPPLAHGL*PATVSGLATTG
Trigger: GCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAGGGGTGGAAGGCGTGACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 72 bp AGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTTGGTaGGACAGGGTGCATCAAAGGGGCTGGCGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: RAGVESPGRCSW*DRVHQRGWRCS
Trigger: AGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CCCAACGCTCGCCTCCAATCTGCCGGTAGAAGTGGCTaGACACGTAGCCAGAGATGCAGCAGGTCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: PNARLQSAGRSG*TRSQRCSRSGH
Trigger: ATGCCCTGACCTGCTGCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGCAGATTGGAGGCGAGCGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp CCACCAGCAGCCAAACCGTCAGAAGCAGCAGGATGGTaGTGGCTGGCAGAGCCTGTGTCGAACCATTGGCCC +
Preference number: 6 (lower is better)
Translates to: PPAAKPSEAAGW*WLAEPVSNHWP
Trigger: GGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGACGGTTTGGCTGCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp GTCATCCTTAAGGCAGTGGAACTCAAGAACTCCCCGTaGCGCCTTCTCCATCTGGAGGCCCGGCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: VILKAVELKNSP*RLLHLEARPSS
Trigger: GGAGCTGGGCCGGGCCTCCAGATGGAGAAGGCGCAACGGGGAGTTCTTGAGTTCCACTGCCTTAAGGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525592.1
ENST00000645992.1
CDS CAA 90 bp CTTCCACCCCTGGCCCATGGCCTGTGCCCAGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCCAACTTCGAGGGTTCCCTACGACTG +
Preference number: 6 (lower is better)
Translates to: LPPLAHGLCPATVSG*ATTGSSNFEGSLRL
Trigger: CAGTCGTAGGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAGGGGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp GGGGAAAGCCCACCAGCAGCCAAACCGTCAGAAGCAGCAGGATGGTaGTGGCTGGCAGAGCCTGTGTCGAACCATTGGCCCAATGCACTG +
Preference number: 6 (lower is better)
Translates to: GESPPAAKPSEAAGW*WLAEPVSNHWPNAL
Trigger: CAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGACGGTTTGGCTGCTGGTGGGCTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp ACAGAGATGGCACAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTGTTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: TEMAQGWGGISRAMF*VRQGASKGLALFFP
Trigger: TGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGTGCCATCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS TCA 72 bp ATCGTCACCACGGCGCCTGTCACTCCGACGCTCCACTaGAGTCTCAGACCAGCGCACGCTATAAGTGTGGGT +
Preference number: 6 (lower is better)
Translates to: IVTTAPVTPTLH*SLRPAHAISVG
Trigger: ACCCACACTTATAGCGTGCGCTGGTCTGAGACTTCAGTGGAGCGTCGGAGTGACAGGCGCCGTGGTGACGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp TGGCCCATGGCCTGTGCCCAGCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCAACTTCGAGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: WPMACAQQQYQD*QPLAAPTSRVP
Trigger: GGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp CTGGCCCATGGCCTGTGCCCAGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCCAACTTCGAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: LAHGLCPATVSG*ATTGSSNFEGS
Trigger: GGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGGCCATGGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp GTAGACTTGTACCAGGGCTGGGGTGGAATCTCCCGGGCGATGTTCTaGGTGCGACAGGGTGCATCAAAGGGGCTGGCGTTGTTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: VDLYQGWGGISRAMF*VRQGASKGLALFFP
Trigger: TGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCACCCCAGCCCTGGTACAAGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000529332.5
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp CGGGCGATGTTCTTGGTGCGACAGGGTGCATCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCTCCAATGACAGTGAGGGGAAAGCCC +
Preference number: 6 (lower is better)
Translates to: RAMFLVRQGASKGLA*FFPKMPPMTVRGKP
Trigger: GGGCTTTCCCCTCACTGTCATTGGAGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CAGCCAAACCGTCAGAAGCAGCAGGATGGTTGTGGCTaGCAGAGCCTGTGTCGAACCATTGGCCCAATGCAC +
Preference number: 6 (lower is better)
Translates to: QPNRQKQQDGCG*QSLCRTIGPMH
Trigger: GTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGACGGTTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CCAGCAGCCAAACCGTCAGAAGCAGCAGGATGGTTGTaGCTGGCAGAGCCTGTGTCGAACCATTGGCCCAAT +
Preference number: 6 (lower is better)
Translates to: PAAKPSEAAGWL*LAEPVSNHWPN
Trigger: ATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGACGGTTTGGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CCAGCAGCCAAACCGTCAGAAGCAGCAGGATGGTTGTaGCTGGCAGAGCCAGAGAAGAGACTGGTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: PAAKPSEAAGWL*LAEPEKRLVVR
Trigger: TCTCACCACCAGTCTCTTCTCTGGCTCTGCCAGCCACAACCATCCTGCTGCTTCTGACGGTTTGGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529332.5
ENST00000642990.1
CDS CCA 72 bp TTCGAGGGTTCCCTACGACTGTCATCCTTAAGGCAGTaGAACCTGTTTGGGGGAATCCGCGCGGGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: FEGSLRLSSLRQ*NLFGGIRAGRA
Trigger: AGCCCTTCCCGCGCGGATTCCCCCAAACAGGTTCCACTGCCTTAAGGATGACAGTCGTAGGGAACCCTCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528010.1
ENST00000532632.1
ENST00000643382.1
ENST00000644476.1
CDS TCA 72 bp TCCCCATCCAGCACTTCACCCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAGCAGACTGGAAGCGCG +
Preference number: 6 (lower is better)
Translates to: SPSSTSPRLRLL*RIFSGQQTGSA
Trigger: CGCGCTTCCAGTCTGCTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCTGGGTGAAGTGCTGGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524835.5
ENST00000643885.1
CDS GCA 72 bp GCCTGGCGCAGCTGCTCCACCTGTGCAGAACTGAGCTaGATGTGGCACAGAATTCTCTTCTCCACGTTTTCC +
Preference number: 6 (lower is better)
Translates to: AWRSCSTCAELS*MWHRILFSTFS
Trigger: GGAAAACGTGGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTGCGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 72 bp TCTGCCGGTAGAAGTGGCTGGACACGTAGCCAGAGATaGAGCAGGTCAGGGCATACAACAAGATGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SAGRSGWTRSQR*SRSGHTTRWLL
Trigger: CAGCAGCCATCTTGTTGTATGCCCTGACCTGCTGCATCTCTGGCTACGTGTCCAGCCACTTCTACCGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp GGATGGTTGTGGCTGGCAGAGCCTGTGTCGAACCATTaGCCCAATGCACTGAGTTCACCACACTCCACGTCA +
Preference number: 6 (lower is better)
Translates to: GWLWLAEPVSNH*PNALSSPHSTS
Trigger: TGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp TTGTACCAGGGCTGTGCCCAGCAACAGTATCAGGATTaGCAACCACTGGCAGCTCCAACTTCGAGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: LYQGCAQQQYQD*QPLAAPTSRVP
Trigger: GGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGCCCTGGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532632.1
ENST00000644476.1
CDS CAA 72 bp AGGATGGTTGTGGCTGGCAGAGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTCACCACACTCCACGTC +
Preference number: 6 (lower is better)
Translates to: RMVVAGRACVEP*AQCTEFTTLHV
Trigger: GACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp CTTGTACCAGGGCTGTGCCCAGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCCAACTTCGAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: LVPGLCPATVSG*ATTGSSNFEGS
Trigger: GGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGCCCTGGTACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532632.1
ENST00000644476.1
CDS CAA 90 bp GACAGTAGACTTGTACCAGGGCTGTGCCCAGCAACAGTATCAGGATaGGCAACCACTGGCAGCTCCAACTTCGAGGGTTCCCTACGACTG +
Preference number: 6 (lower is better)
Translates to: DSRLVPGLCPATVSG*ATTGSSNFEGSLRL
Trigger: CAGTCGTAGGGAACCCTCGAAGTTGGAGCTGCCAGTGGTTGCCAATCCTGATACTGTTGCTGGGCACAGCCCTGGTACAAGTCTACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532632.1
ENST00000644476.1
CDS TCA 72 bp TGGCAGAGCCTGTGTCGAACCATTGGCCCAATGCACTaGGTTCACCACACTCCACGTCAGGAAGAAAGGCAC +
Preference number: 6 (lower is better)
Translates to: WQSLCRTIGPMH*VHHTPRQEERH
Trigger: GTGCCTTTCTTCCTGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 72 bp TCCCCATCCAGCACTTCACCCAGGCTAAGGCTTTTGTaGCGTATCTTCTCAGGGCAGCAGACTGGAAGCTCG +
Preference number: 6 (lower is better)
Translates to: SPSSTSPRLRLL*RIFSGQQTGSS
Trigger: CGAGCTTCCAGTCTGCTGCCCTGAGAAGATACGTCACAAAAGCCTTAGCCTGGGTGAAGTGCTGGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530563.1
ENST00000644349.1
CDS GCA 72 bp GTGGCTGGCAGAGCCTGTGTCGAACCATTGGCCCAATaGACTGAGTTCACCACACTCCACGTCAGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: VAGRACVEPLAQ*TEFTTLHVRKK
Trigger: TTTCTTCCTGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS GCA 72 bp TGGAATCTCCCGGGCGATGTTCTTGGTGCGACAGGGTaGATCAAAGGGGCTGGCGTTGTTCTTCCCAAAGAT +
Preference number: 6 (lower is better)
Translates to: WNLPGDVLGATG*IKGAGVVLPKD
Trigger: ATCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAACATCGCCCGGGAGATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp AGAAGCAGCAGGATGGTTGTGGCTGGCAGAGCCTGTGTCGAACCATaGGCCCAATGCACTGAGTTCACCACACTCCACGTCAGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: RSSRMVVAGRACVEP*AQCTEFTTLHVRKK
Trigger: TTTCTTCCTGACGTGGAGTGTGGTGAACTCAGTGCATTGGGCCAATGGTTCGACACAGGCTCTGCCAGCCACAACCATCCTGCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000642799.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CGCAGCTGCTCCACCTGTGCAGAACTGAGCTGCATGTaGCACAGAATTCTCTTCTCCACGTTTTCCCGAAAG +
Preference number: 6 (lower is better)
Translates to: RSCSTCAELSCM*HRILFSTFSRK
Trigger: CTTTCGGGAAAACGTGGAGAAGAGAATTCTGTGCCACATGCAGCTCAGTTCTGCACAGGTGGAGCAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CCTAGGAACTCGTCAGGTCGTAACCCATCCAAGCTGTaGGGCTTGACGTCCCGCACTGAAACATTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: PRNSSGRNPSKL*GLTSRTETLAN
Trigger: ATTTGCCAATGTTTCAGTGCGGGACGTCAAGCCCCACAGCTTGGATGGGTTACGACCTGACGAGTTCCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp GGATACCTGAAAGGCAGGAAGCCTCCAACAGTCATGTaGATGACAGTAGACTTGTACCAGGGCTGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: GYLKGRKPPTVM*MTVDLYQGWGG
Trigger: TCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS CCA 72 bp ATGGCACTGAAAGGCAGGAAGCCTCCAACAGTCATGTaGATGACAGTAGACTTGTACCAGGGCTGTGCCCAG +
Preference number: 6 (lower is better)
Translates to: MALKGRKPPTVM*MTVDLYQGCAQ
Trigger: CTGGGCACAGCCCTGGTACAAGTCTACTGTCATCCACATGACTGTTGGAGGCTTCCTGCCTTTCAGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532632.1
ENST00000644476.1
CDS CAA 72 bp TTCTTGGTGCGACAGGGTGCATCAAAGGGGCTGGCGTaGTTCTTCCCAAAGATGCCTCCAATGACAGTGAGG +
Preference number: 6 (lower is better)
Translates to: FLVRQGASKGLA*FFPKMPPMTVR
Trigger: CCTCACTGTCATTGGAGGCATCTTTGGGAAGAACAACGCCAGCCCCTTTGATGCACCCTGTCGCACCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 72 bp GCATACAACAAGATGGCTGCTGAGTTAATGGCCCCATaGCGGTGCACATTGAACATGCCCAGCAGTGCCATG +
Preference number: 6 (lower is better)
Translates to: AYNKMAAELMAP*RCTLNMPSSAM
Trigger: CATGGCACTGCTGGGCATGTTCAATGTGCACCGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp GTCCAAATGGGTCCAGAGTCCTATCTTGTGGCTGTGTaGCAGGAAACCACTCTCCTCCATGTAGCCCACAAA +
Preference number: 6 (lower is better)
Translates to: VQMGPESYLVAV*QETTLLHVAHK
Trigger: TTTGTGGGCTACATGGAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATAGGACTCTGGACCCATTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CACCCTGGTCAAAGTCATCACCAGAACCTGCAGAGGTaGTCTCCTCATCTAAGTTGTACCGAGCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: HPGQSHHQNLQR*SPHLSCTEPGH
Trigger: ATGACCTGGCTCGGTACAACTTAGATGAGGAGACCACCTCTGCAGGTTCTGGTGATGACTTTGACCAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp ACCCACGCCAAGCACAGCACAGAGCAGACCACGGTATaGGGGGAAGCGGAAGACATCTGTATGGATAATTTT +
Preference number: 6 (lower is better)
Translates to: THAKHSTEQTTV*GEAEDICMDNF
Trigger: AAAATTATCCATACAGATGTCTTCCGCTTCCCCCCATACCGTGGTCTGCTCTGTGCTGTGCTTGGCGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp TCTAGGTGGAAGTCCAAATGGGTCCAGAGTCCTATCTaGTGGCTGTGTGGCAGGAAACCACTCTCCTCCATG +
Preference number: 6 (lower is better)
Translates to: SRWKSKWVQSPI*WLCGRKPLSSM
Trigger: CATGGAGGAGAGTGGTTTCCTGCCACACAGCCACAAGATAGGACTCTGGACCCATTTGGACTTCCACCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp TCACCAGAACCTGCAGAGGTGGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTCCGAAGCACACGCATT +
Preference number: 6 (lower is better)
Translates to: SPEPAEVVSSSK*YRARSFRSTRI
Trigger: AATGCGTGTGCTTCGGAATGACCTGGCTCGGTACAACTTAGATGAGGAGACCACCTCTGCAGGTTCTGGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 72 bp GATGCAGCAGGTCAGGGCATACAACAAGATGGCTGCTaGGTTAATGGCCCCATGACGGTGCACATTGAACAT +
Preference number: 6 (lower is better)
Translates to: DAAGQGIQQDGC*VNGPMTVHIEH
Trigger: ATGTTCAATGTGCACCGTCATGGGGCCATTAACTCAGCAGCCATCTTGTTGTATGCCCTGACCTGCTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp ATTCGGTCTCCATGGAATTCTAGGTGGAAGTCCAAATaGGTCCAGAGTCCTATCTTGTGGCTGTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: IRSPWNSRWKSK*VQSPILWLCGR
Trigger: CCTGCCACACAGCCACAAGATAGGACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CCTACGACTGTCATCCTTAAGGCAGTGGAACCTGTTTaGGGGAATCCTGAGGTTATAGAAACCAGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: PTTVILKAVEPV*GNPEVIETREV
Trigger: AACCTCCCTGGTTTCTATAACCTCAGGATTCCCCCAAACAGGTTCCACTGCCTTAAGGATGACAGTCGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528669.5
ENST00000642799.1
CDS CAA 90 bp TCAAAGTCATCACCAGAACCTGCAGAGGTGGTCTCCTCATCTAAGTaGTACCGAGCCAGGTCATTCCGAAGCACACGCATTAGAATGACA +
Preference number: 6 (lower is better)
Translates to: SKSSPEPAEVVSSSK*YRARSFRSTRIRMT
Trigger: TGTCATTCTAATGCGTGTGCTTCGGAATGACCTGGCTCGGTACAACTTAGATGAGGAGACCACCTCTGCAGGTTCTGGTGATGACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp ACCACTCTCCTCCATGTAGCCCACAAAGCCCCGGATTaGCAAGTCATCTACCACAAATTCAAAGTAGTACAG +
Preference number: 6 (lower is better)
Translates to: TTLLHVAHKAPD*QVIYHKFKVVQ
Trigger: CTGTACTACTTTGAATTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGGGCTACATGGAGGAGAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp GTGGCAGGAAACCACTCTCCTCCATGTAGCCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAAATTCAAAGTAGTACAGTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: VAGNHSPPCSPQSPG*ASHLPQIQSSTVLQ
Trigger: TTGAAGAACTGTACTACTTTGAATTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGGGCTACATGGAGGAGAGTGGTTTCCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp ACATCTGTATGGATAATTTTCCAGCCATTGTCACCCTaGTCAAAGTCATCACCAGAACCTGCAGAGGTGGTC +
Preference number: 6 (lower is better)
Translates to: TSVWIIFQPLSP*SKSSPEPAEVV
Trigger: GACCACCTCTGCAGGTTCTGGTGATGACTTTGACCAGGGTGACAATGGCTGGAAAATTATCCATACAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp AACCACTCTCCTCCATGTAGCCCACAAAGCCCCGGATaGGCAAGTCATCTACCACAAATTCAAAGTAGTACA +
Preference number: 6 (lower is better)
Translates to: NHSPPCSPQSPG*ASHLPQIQSST
Trigger: TGTACTACTTTGAATTTGTGGTAGATGACTTGCCAATCCGGGGCTTTGTGGGCTACATGGAGGAGAGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS TCA 72 bp GGGTTAGGGTACTGGATGAGTAGGGACAGGAAAAATTaGGGTCAGGAACCTGACAGTAATAGCCATGGAATA +
Preference number: 6 (lower is better)
Translates to: GLGYWMSRDRKN*GQEPDSNSHGI
Trigger: TATTCCATGGCTATTACTGTCAGGTTCCTGACCTCAATTTTTCCTGTCCCTACTCATCCAGTACCCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396854.8
ENST00000646500.1
CDS CCA 72 bp AACACAAGCACCATGGAGTTGATGATGGACAACCAATaGATTTCCAGTGTTCGAGGAAAGAAACCACCATCG +
Preference number: 6 (lower is better)
Translates to: NTSTMELMMDNQ*ISSVRGKKPPS
Trigger: CGATGGTGGTTTCTTTCCTCGAACACTGGAAATCCATTGGTTGTCCATCATCAACTCCATGGTGCTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 72 bp AAGCGGAAGACATCTGTATGGATAATTTTCCAGCCATaGTCACCCTGGTCAAAGTCATCACCAGAACCTGCA +
Preference number: 6 (lower is better)
Translates to: KRKTSVWIIFQP*SPWSKSSPEPA
Trigger: TGCAGGTTCTGGTGATGACTTTGACCAGGGTGACAATGGCTGGAAAATTATCCATACAGATGTCTTCCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643885.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp TTGGCAAATATAATTCGGTCTCCATGGAATTCTAGGTaGAAGTCCAAATGGGTCCAGAGTCCTATCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LANIIRSPWNSR*KSKWVQSPILW
Trigger: CCACAAGATAGGACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAATTATATTTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CCA 72 bp CGCACTGAAACATTGGCAAATATAATTCGGTCTCCATaGAATTCTAGGTGGAAGTCCAAATGGGTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: RTETLANIIRSP*NSRWKSKWVQS
Trigger: ACTCTGGACCCATTTGGACTTCCACCTAGAATTCCATGGAGACCGAATTATATTTGCCAATGTTTCAGTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000525592.1
ENST00000528010.1
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000642799.1
ENST00000642990.1
ENST00000643382.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645992.1
ENST00000646500.1
ENST00000646762.2
CDS CAA 90 bp ATGACAGCCACAAAACCCACCAGTAAAAACACAAGCACCATGGAGTaGATGATGGACAACCAATGGATTTCCAGTGTTCGAGGAAAGAAA +
Preference number: 6 (lower is better)
Translates to: MTATKPTSKNTSTME*MMDNQWISSVRGKK
Trigger: TTTCTTTCCTCGAACACTGGAAATCCATTGGTTGTCCATCATCAACTCCATGGTGCTTGTGTTTTTACTGGTGGGTTTTGTGGCTGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000261789.9
ENST00000396854.8
ENST00000524835.5
ENST00000528669.5
ENST00000528895.5
ENST00000529332.5
ENST00000530468.5
ENST00000530563.1
ENST00000531406.1
ENST00000642799.1
ENST00000642990.1
ENST00000643801.1
ENST00000643885.1
ENST00000644349.1
ENST00000645452.1
ENST00000645838.1
ENST00000646500.1
ENST00000646762.2