Pregenerated sensors for TM6SF2 (Homo sapiens)
Ensembl gene IDs: ENSG00000213996Ensembl transcript IDs: ENST00000389363.5, ENST00000431465.2, ENST00000586107.1, ENST00000590431.6, ENST00000591001.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGTGTGGGAGTTGGAGCATGGTGACAGCTGTGGGAGGCTCTCCTTaGAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTG | + |
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Preference number: 1 (lower is better) Translates to: LCGSWSMVTAVGGSP*RNTWSLVSIPPTGL Trigger: CAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCCACAGCTGTCACCATGCTCCAACTCCCACACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| 3UTR CAA 90 bp | TTTGTGTGGGAGTTGGAGCATGGTGACAGCTGTGGGAGGCTCTCCTaGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACT | + |
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Preference number: 2 (lower is better) Translates to: FVWELEHGDSCGRLS*QEHLVVGLHPTHWT Trigger: AGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCCACAGCTGTCACCATGCTCCAACTCCCACACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGCCAGGTAGGGCTGACTaGGCACGTAAACAGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LHPTHWTETTIAKTKDTRPGRAD*ARKQSP Trigger: AGGACTCTGTTTACGTGCCCAGTCAGCCCTACCTGG...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGAGCGCCCGGGGCTGGCTaGAGACCTTCATGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGAPGAG*RPSCQP Trigger: GGGCTGGCATGAAGGTCTTCAGCCAGCCCCGGGCGC...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | AGACTAAAGACACCCGGAGATGTCCCTCCTGTCTCTAAAACACCCAACCCCCGCCATAGCGGCGGCTGCTaGACCCCGGCTCAGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RLKTPGDVPPVSKTPNPRHSGGC*TPAQPR Trigger: TCGGGGCTGAGCCGGGGTCCAGCAGCCGCCGCTATG...GCGGGGGTTGGGTGTTTTAGAGACAGGAGGGACATCTCCGGGTGTCTTTAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGAGGGGTCGGAGGGTGGTaGCTGGTGGAAGAATGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGGVGGW*LVEECG Trigger: CCCGCATTCTTCCACCAGCCACCACCCTCCGACCCC...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGCTCGGCTCCTCGTTaGCGGCGAGTCCGGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTRSAPR*RRVRAE Trigger: CTCGGCCCGGACTCGCCGCCAACGAGGAGCCGAGCG...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGATCGGAGGGTGGTGGCTaGTGGAAGAATGCGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGSEGGG*WKNAGH Trigger: GTGGCCCGCATTCTTCCACCAGCCACCACCCTCCGA...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGAAGCAACCAGGGAAGGTaGGAGCATAGGCAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGSNQGR*EHRQPG Trigger: GCCTGGCTGCCTATGCTCTCACCTTCCCTGGTTGCT...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | CACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGAGATGTCCCTCCGCCACCCACAGGGGGTaGGAGAGCGCCGAGACGTGG | + |
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Preference number: 4 (lower is better) Translates to: HWTETTIAKTKDTRRCPSATHRG*ESAETW Trigger: CCACGTCTCGGCGCTCTCGCACCCCCTGTGGGTGGC...GGAGGGACATCTCCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGGCACCATGTTGGCGGTaGAGCGGGTTAGCGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LHPTHWTETTIAKTKDTRAPCWR*SGLAPG Trigger: CCCGGGCGCTAACCCGCTGCACCGCCAACATGGTGC...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGCAATGCTGCTTCTTGTaGAGGGCTAGGGGGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRLSLQEHLVVGLHPTHWQCCFL*RARGSE Trigger: CTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTG...CCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCGCGCCGAGACGTGGTTaGGCGCGTAGGACACCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTAPRRG*ARRTPG Trigger: TCCCGGTGTCCTACGCGCTCAACCACGTCTCGGCGC...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACATCCCAGTAGCAGATaGAGACTCCGTGCGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGHPSSR*RLRALC Trigger: GCACAGCGCACGGAGTCTTCATCTGCTACTGGGATG...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGATGGCTGGTGGAAGAATaGGGGCCACTGAAGGCAACG | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGWLVEE*GPLKAT Trigger: CGTTGCCTTCAGTGGCCCGCATTCTTCCACCAGCCA...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACACCAGGATGCTCATaGCGAAGGAACCCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GRLSLQEHLVVGLHPTHWTPGCS*RRNPAS Trigger: ACTGGCTGGGTTCCTTCGCCATGAGCATCCTGGTGT...CCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGATGCGAGAACTGTGCCTaGCCGATGCCTCCAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGCENCA*PMPPAN Trigger: GTTTGCTGGAGGCATCGGCCAGGCACAGTTCTCGCA...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACAGAGTCCTGGGTCCTaGGTCCACAGCTCTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGQSPGS*VHSSLN Trigger: ATTGAGAGAGCTGTGGACTCAGGACCCAGGACTCTG...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACAGCGCCGCGATCTTaGCGGCCAGCGGCGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDTAPRS*RPAAGC Trigger: ACATCCCGCCGCTGGCCGGCAAGATCGCGGCGCTGT...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGAAGGTCAGCCGGACGCTaGAGGAGTCCCTTTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGRSAGR*RSPFLC Trigger: ACAAAGAAAGGGACTCCTGCAGCGTCCGGCTGACCT...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGAGCGCATACAGCAGATTaGACACGAAGAAGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGAHTAD*TRRSSP Trigger: GGGGCTGCTTCTTCGTGTGCAATCTGCTGTATGCGC...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGGAAGACAGCATAGAGTaGGTCATAGGAGACCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: GRLSLQEHLVVGLHPTHWEDSIE*VIGDLA Trigger: GGCGAGGTCTCCTATGACCCACTCTATGCTGTCTTC...CCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | AGACTAAAGACACCCGGAGATGTCCCTCCTGTCTCTAAAACACCCAACCCCCGCCATGCCAGCCCAGCATaGCACCAGCAGGTAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RLKTPGDVPPVSKTPNPRHASPA*HQQVGD Trigger: ATCCCCTACCTGCTGGTGCCATGCTGGGCTGGCATG...GCGGGGGTTGGGTGTTTTAGAGACAGGAGGGACATCTCCGGGTGTCTTTAGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| 3UTR CAA 72 bp | GAGTTGGAGCATGGTGACAGCTGTGGGAGGCTCTCCTaGCAGGAACACTTGGTCGTTGGTCTCCATCCCACC | + |
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Preference number: 4 (lower is better) Translates to: ELEHGDSCGRLS*QEHLVVGLHPT Trigger: GGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCCACAGCTGTCACCATGCTCCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGTGGTGTAGAACTCCATaGAGCCCACCACATAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GRLSLQEHLVVGLHPTHWWCRTP*SPPHSC Trigger: ACAGCTATGTGGTGGGCTTCATGGAGTTCTACACCA...CCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGATGGAAGCCCCCATGTaGGAGAACTGTGCCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LHPTHWTETTIAKTKDTRMEAPM*ENCAWP Trigger: CGGCCAGGCACAGTTCTCGCACATGGGGGCTTCCAT...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAAGTTAGCGCCCGGGGCTaGCTGAAGACCTTCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKVSARG*LKTFMP Trigger: TGGCATGAAGGTCTTCAGCCAGCCCCGGGCGCTAAC...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGCCTCTTGCACCATGTTaGCGGTGCAGCGGGTTAGCG | + |
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Preference number: 4 (lower is better) Translates to: LHPTHWTETTIAKTKDTRPLAPC*RCSGLA Trigger: CGCTAACCCGCTGCACCGCCAACATGGTGCAAGAGG...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACCAGGCACACGGTAGGTaGAGGGTGTGCGCAGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDQAHGR*RVCAGA Trigger: TGCACCTGCGCACACCCTTCACCTACCGTGTGCCTG...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCGGAGTTGGAGCATGGTaGCAGCTGTGGGAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTGVGAW*QLWEAL Trigger: GAGAGCCTCCCACAGCTGTCACCATGCTCCAACTCC...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | CACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGAGATGTCCCTCCAGACTCCGTGCGCTGTaGGCAGGTATGGCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HWTETTIAKTKDTRRCPSRLRAL*AGMALP Trigger: AGGGAGAGCCATACCTGCGCACAGCGCACGGAGTCT...GGAGGGACATCTCCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAAGGTATCTCTTCCTTCTaGAGATGGCGCCGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKGISSF*RWRRPW Trigger: CCATGGCCGGCGCCATCTGCAGAAGGAAGAGATACC...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | CACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGAGATGTCCCTCCCATGTGCGAGAACTGTaGCTGGCCGATGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HWTETTIAKTKDTRRCPSHVREL*LADASS Trigger: GCTGGAGGCATCGGCCAGGCACAGTTCTCGCACATG...GGAGGGACATCTCCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGCGCTGTGCGCAGGTATaGCTCTCCCTCCTTGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: LHPTHWTETTIAKTKDTRRCAQV*LSLLGV Trigger: TACACCAAGGAGGGAGAGCCATACCTGCGCACAGCG...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCAGATGGCGCCGGCCATaGCCAGGTAGAGGAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTRWRRP*PGRGGS Trigger: ACTACCTCCTCTACCTGGCCATGGCCGGCGCCATCT...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCTCTTCCTTCTGCAGATaGCGCCGGCCATGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTSSFCR*RRPWPG Trigger: ACCTGGCCATGGCCGGCGCCATCTGCAGAAGGAAGA...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | AGACTAAAGACACCCGGAGATGTCCCTCCTGTCTCTAAAACACCCAACCCCCGCGGAACACTTGGTCGTTaGTCTCCATCCCACCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RLKTPGDVPPVSKTPNPRGTLGR*SPSHPL Trigger: CAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCC...GCGGGGGTTGGGTGTTTTAGAGACAGGAGGGACATCTCCGGGTGTCTTTAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCGGTCCACAACCGAGGTaGAGGCGAAGACAGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTGPQPR*RRRQRR Trigger: TCTTCGCTGTCTTCGCCTTCACCTCGGTTGTGGACC...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGGGAAGAAGGCAGGCCTaGTCTCGGAGCTGTATTTGC | + |
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Preference number: 4 (lower is better) Translates to: LHPTHWTETTIAKTKDTRGRRQA*SRSCIC Trigger: GCAAATACAGCTCCGAGATCAGGCCTGCCTTCTTCC...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACAAGGGTGTGCGCAGGTaGATGGAAGCCCCCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDKGVRR*MEAPMC Trigger: GCACATGGGGGCTTCCATGCACCTGCGCACACCCTT...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACGTGTGCGCAGGTGCATaGAAGCCCCCATGTGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDVCAGA*KPPCAR Trigger: TCTCGCACATGGGGGCTTCCATGCACCTGCGCACAC...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | AGACTAAAGACACCCGGAGATGTCCCTCCTGTCTCTAAAACACCCAACCCCCGCCGTTTGTGTGGGAGTTaGAGCATGGTGACAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RLKTPGDVPPVSKTPNPRRLCGS*SMVTAV Trigger: CACAGCTGTCACCATGCTCCAACTCCCACACAAACG...GCGGGGGTTGGGTGTTTTAGAGACAGGAGGGACATCTCCGGGTGTCTTTAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACCAGATGAAGACTCCGTaGGCTGTGCGCAGGTATGGC | + |
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Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDQMKTP*AVRRYG Trigger: GCCATACCTGCGCACAGCGCACGGAGTCTTCATCTG...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAACCACAGCTCTCTCAATaGTGCTTCTTGTGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKPQLSQ*CFLWRA Trigger: AGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGG...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAACAAAGCAGGCATCTGTaGGGCAATCAAGCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKQSRHL*GNQAPP Trigger: TGGTGGTGCTTGATTGCCCCACAGATGCCTGCTTTG...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAACCTTGCAGGAACACTTaGTCGTTGGTCTCCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKPCRNT*SLVSIP Trigger: TGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGG...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR TCA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCTCCCACCCACTGGACTaGAACTACCATAGCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: GLHPTHWTETTIAKTKDTSHPLD*NYHSQD Trigger: GTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGA...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | AGACTAAAGACACCCGGAGATGTCCCTCCTGTCTCTAAAACACCCAACCCCCGCTTTCTTTGTTCCTCTTaGACCATGTTGGCGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLKTPGDVPPVSKTPNPRFLCSS*TMLAVQ Trigger: CTGCACCGCCAACATGGTGCAAGAGGAACAAAGAAA...GCGGGGGTTGGGTGTTTTAGAGACAGGAGGGACATCTCCGGGTGTCTTTAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR GCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACCAGCTCTCTCAATGCTaGTTCTTGTGGAGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDQLSQC*FLWRAR Trigger: CCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTG...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CCA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACAGGGTCCCGCAGGTATaGCTCATACTGGTAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: VGLHPTHWTETTIAKTKDRVPQV*LILVDI Trigger: TATATCTACCAGTATGAGCCATACCTGCGGGACCCT...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS CCA 90 bp | CCCGGCTCAGCCCCGACGCGTTCTCCAGGGCGCTCGGCTCCTCGTTaGCGGCGAGTCCGGGCCGAGGCTGCCAGGGACCCGCCCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PGSAPTRSPGRSAPR*RRVRAEAARDPPRT Trigger: TGTGCGGGGCGGGTCCCTGGCAGCCTCGGCCCGGACTCGCCGCCAACGAGGAGCCGAGCGCCCTGGAGAACGCGTCGGGGCTGAGCCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS GCA 90 bp | TCCAGGGCGCTCGGCTCCTCGTTGGCGGCGAGTCCGGGCCGAGGCTaGCAGGGACCCGCCCCGCACAAAGGTCGACCCCGCTGCGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRALGSSLAASPGRG*QGPAPHKGRPRCAL Trigger: CAGGGCGCAGCGGGGTCGACCTTTGTGCGGGGCGGGTCCCTGGCAGCCTCGGCCCGGACTCGCCGCCAACGAGGAGCCGAGCGCCCTGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS CCA 90 bp | GCTGCCAGGGACCCGCCCCGCACAAAGGTCGACCCCGCTGCGCCCTaGGCAGGCCGCCGTGACCGCCCTGCGTGTTCCCAGGGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AARDPPRTKVDPAAP*AGRRDRPACSQGAS Trigger: GGAGGCTCCCTGGGAACACGCAGGGCGGTCACGGCGGCCTGCCCAGGGCGCAGCGGGGTCGACCTTTGTGCGGGGCGGGTCCCTGGCAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS CCA 90 bp | CGCGATCTTGCCGGCCAGCGGCGGGATGTCCATAGCGGCGGCTGCTaGACCCCGGCTCAGCCCCGACGCGTTCTCCAGGGCGCTCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RDLAGQRRDVHSGGC*TPAQPRRVLQGARL Trigger: GAGCCGAGCGCCCTGGAGAACGCGTCGGGGCTGAGCCGGGGTCCAGCAGCCGCCGCTATGGACATCCCGCCGCTGGCCGGCAAGATCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000389363.5 ENST00000586107.1 |
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| CDS TCA 90 bp | GCTGTGCGCAGGTATGGCTCTCCTGCGAGAGCGCCGAGACGTGGTTaGGCGCGTAGGACACCGGGAGGGCGCTCAGCGACAGCGCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: AVRRYGSPARAPRRG*ARRTPGGRSATAPR Trigger: TCGCGGCGCTGTCGCTGAGCGCCCTCCCGGTGTCCTACGCGCTCAACCACGTCTCGGCGCTCTCGCAGGAGAGCCATACCTGCGCACAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS TCA 90 bp | TCATCAATGCCACCCACAGGGGGTGCGAGAGCGCCGAGACGTGGTTaGGCGCGTAGGACACCGGGAGGGCGCTCAGCGACAGCGCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSMPPTGGARAPRRG*ARRTPGGRSATAPR Trigger: TCGCGGCGCTGTCGCTGAGCGCCCTCCCGGTGTCCTACGCGCTCAACCACGTCTCGGCGCTCTCGCACCCCCTGTGGGTGGCATTGATGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000591001.5 |
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| CDS-3UTR CAA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGAGCGCTCGGCTCCTCGTaGGCGGCGAGTCCGGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGALGSS*AASPGR Trigger: TCGGCCCGGACTCGCCGCCAACGAGGAGCCGAGCGC...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS CCA 90 bp | GCCATCCCAGTAGCAGATGAAGACTCCGTGCGCTGTGCGCAGGTATaGCTCTCCCTGTGGGGGCAGGTGGGAGACTCAGACGGGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AIPVADEDSVRCAQV*LSLWGQVGDSDGQC Trigger: GCACTGCCCGTCTGAGTCTCCCACCTGCCCCCACAGGGAGAGCCATACCTGCGCACAGCGCACGGAGTCTTCATCTGCTACTGGGATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS TCA 90 bp | AACCTTCTCCTGGCCACCCCTGGCTGGAGCCCTAGAGAGGCGTCCTaGTTTCTCCTACAGACACTTCTGGCTCCACCCTGCCCTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: NLLLATPGWSPREAS*FLLQTLLAPPCPGT Trigger: GGTCCCAGGGCAGGGTGGAGCCAGAAGTGTCTGTAGGAGAAATCAGGACGCCTCTCTAGGGCTCCAGCCAGGGGTGGCCAGGAGAAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS CCA 90 bp | GCTAGGCCACCACCTACACCTGAGACGTTCCCTGGAACCTTCTCCTaGCCACCCCTGGCTGGAGCCCTAGAGAGGCGTCCTGATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARPPPTPETFPGTFS*PPLAGALERRPDFS Trigger: GGAGAAATCAGGACGCCTCTCTAGGGCTCCAGCCAGGGGTGGCCAGGAGAAGGTTCCAGGGAACGTCTCAGGTGTAGGTGGTGGCCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS-3UTR CAA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAAGACAGCGCCGCGATCTaGCCGGCCAGCGGCGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKDSAAI*PASGGM Trigger: CATCCCGCCGCTGGCCGGCAAGATCGCGGCGCTGTC...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS TCA 90 bp | TGCACACGAAGAAGCAGCCCCAGGTGTCCTCAGGCACACGGTAGGTaGAGGGTGTGCGCAGGTGCATGGAAGCCCCCATGTGCGAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: CTRRSSPRCPQAHGR*RVCAGAWKPPCART Trigger: AGTTCTCGCACATGGGGGCTTCCATGCACCTGCGCACACCCTTCACCTACCGTGTGCCTGAGGACACCTGGGGCTGCTTCTTCGTGTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CCA 90 bp | GAACTGTGCCTGGCCGATGCCTCCAGCAAACACCAAGGCCCAGTCTaGAAGCCAGGAGCAACCAGGGAAGGTGAGAGCATAGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELCLADASSKHQGPV*KPGATREGESIGSQ Trigger: CTGGCTGCCTATGCTCTCACCTTCCCTGGTTGCTCCTGGCTTCCAGACTGGGCCTTGGTGTTTGCTGGAGGCATCGGCCAGGCACAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CCA 90 bp | GAGTCCTGGGTCCTGAGTCCACAGCTCTCTCAATGCTGCTTCTTGTaGAGGGCTAGGGGGTCGGAGGGTGGTGGCTGGTGGAAGAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: ESWVLSPQLSQCCFL*RARGSEGGGWWKNA Trigger: CGCATTCTTCCACCAGCCACCACCCTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGACCCAGGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS-3UTR CAA 90 bp | GGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGATCCTCTTGCACCATGTaGGCGGTGCAGCGGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSPCRNTWSLVSIPPTGSSCTM*AVQRVS Trigger: GCTAACCCGCTGCACCGCCAACATGGTGCAAGAGGA...TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CAA 90 bp | GGGAGGCTCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGTCTCAATGCTGCTTCTaGTGGAGGGCTAGGGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRLSLQEHLVVGLHPTHWSQCCF*WRARGS Trigger: CGACCCCCTAGCCCTCCACAAGAAGCAGCATTGAGA...CCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS TCA 90 bp | TCCCCAGGTAGGGCTGACTGGGCACGTAAACAGAGTCCTGGGTCCTaGGTCCACAGCTCTCTCAATGCTGCTTCTTGTGGAGGGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGRADWARKQSPGS*VHSSLNAASCGGLG Trigger: CCCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGACCCAGGACTCTGTTTACGTGCCCAGTCAGCCCTACCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS TCA 90 bp | CAAACACCAAGGCCCAGTCTGGAAGCCAGGAGCAACCAGGGAAGGTaGGAGCATAGGCAGCCAGGCCGCAGAAAGGCAGGACATAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: QTPRPSLEARSNQGR*EHRQPGRRKAGHKT Trigger: TGTTTTATGTCCTGCCTTTCTGCGGCCTGGCTGCCTATGCTCTCACCTTCCCTGGTTGCTCCTGGCTTCCAGACTGGGCCTTGGTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CCA 90 bp | ACCGTGGGTTTCCCAGCTCCGGGTCCCTTTCAGTTTTGCCCAGGATaGAAGGGACAACAGGGAGTTGAACGGGGAAATAACAGTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TVGFPAPGPFQFCPG*KGQQGVERGNNSET Trigger: GGTCTCACTGTTATTTCCCCGTTCAACTCCCTGTTGTCCCTTCCATCCTGGGCAAAACTGAAAGGGACCCGGAGCTGGGAAACCCACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS-3UTR CAA 90 bp | CTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGAGGAACACTTGGTCGTaGGTCTCCATCCCACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LHPTHWTETTIAKTKDTRRNTWS*VSIPPT Trigger: AGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCT...CCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CAA 90 bp | TCTCCTTGCAGGAACACTTGGTCGTTGGTCTCCATCCCACCCACTGGACTGAAATGTGGGAGGCTCTCCTaGCAGGAACACTTGGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPCRNTWSLVSIPPTGLKCGRLS*QEHLVV Trigger: AACGACCAAGTGTTCCTGCAAGGAGAGCCTCCCACA...TTTCAGTCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS CCA 90 bp | TTGAACGGGGAAATAACAGTGAGACCCTCTGTCCAAGAACAGAAGTaGCTGCCCAGGCACAGGGTGGATGTAAGCAATGCTAGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LNGEITVRPSVQEQK*LPRHRVDVSNARPP Trigger: TGGTGGCCTAGCATTGCTTACATCCACCCTGTGCCTGGGCAGCCACTTCTGTTCTTGGACAGAGGGTCTCACTGTTATTTCCCCGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS-3UTR CAA 90 bp | GGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCTCCTTGCAGGAACACTaGGTCGTTGGTCTCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLHPTHWTETTIAKTKDTSLQEH*VVGLHP Trigger: GGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGA...GGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CAA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACAGCGCATACAGCAGATaGCACACGAAGAAGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLHPTHWTETTIAKTKDSAYSR*HTKKQP Trigger: GGGCTGCTTCTTCGTGTGCAATCTGCTGTATGCGCT...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CAA 90 bp | GTTGGTCTCCATCCCACCCACTGGACTGAAACTACCATAGCCAAGACTAAAGACGCGTTTGTGTGGGAGTaGGAGCATGGTGACAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGLHPTHWTETTIAKTKDAFVWE*EHGDSC Trigger: ACAGCTGTCACCATGCTCCAACTCCCACACAAACGC...GTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTGGGTGGGATGGAGACCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS-3UTR CAA 90 bp | CACTGGACTGAAACTACCATAGCCAAGACTAAAGACACCCGGAGATGTCCCTCCCTTTCTTTGTTCCTCTaGCACCATGTTGGCGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HWTETTIAKTKDTRRCPSLSLFL*HHVGGA Trigger: TGCACCGCCAACATGGTGCAAGAGGAACAAAGAAAG...GGAGGGACATCTCCGGGTGTCTTTAGTCTTGGCTATGGTAGTTTCAGTCCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS CCA 72 bp | GCCCCGACGCGTTCTCCAGGGCGCTCGGCTCCTCGTTaGCGGCGAGTCCGGGCCGAGGCTGCCAGGGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: APTRSPGRSAPR*RRVRAEAARDP Trigger: CGGGTCCCTGGCAGCCTCGGCCCGGACTCGCCGCCAACGAGGAGCCGAGCGCCCTGGAGAACGCGTCGGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS GCA 72 bp | CTCGGCTCCTCGTTGGCGGCGAGTCCGGGCCGAGGCTaGCAGGGACCCGCCCCGCACAAAGGTCGACCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSSLAASPGRG*QGPAPHKGRPR Trigger: GCGGGGTCGACCTTTGTGCGGGGCGGGTCCCTGGCAGCCTCGGCCCGGACTCGCCGCCAACGAGGAGCCGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS CCA 72 bp | GCCGGCCAGCGGCGGGATGTCCATAGCGGCGGCTGCTaGACCCCGGCTCAGCCCCGACGCGTTCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGQRRDVHSGGC*TPAQPRRVLQG Trigger: GCCCTGGAGAACGCGTCGGGGCTGAGCCGGGGTCCAGCAGCCGCCGCTATGGACATCCCGCCGCTGGCCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000586107.1 |
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| CDS CCA 72 bp | GACCCGCCCCGCACAAAGGTCGACCCCGCTGCGCCCTaGGCAGGCCGCCGTGACCGCCCTGCGTGTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DPPRTKVDPAAP*AGRRDRPACSQ Trigger: CTGGGAACACGCAGGGCGGTCACGGCGGCCTGCCCAGGGCGCAGCGGGGTCGACCTTTGTGCGGGGCGGGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS CAA 72 bp | AGCCCCGACGCGTTCTCCAGGGCGCTCGGCTCCTCGTaGGCGGCGAGTCCGGGCCGAGGCTGCCAGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SPDAFSRALGSS*AASPGRGCQGP Trigger: GGGTCCCTGGCAGCCTCGGCCCGGACTCGCCGCCAACGAGGAGCCGAGCGCCCTGGAGAACGCGTCGGGGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS CAA 72 bp | GACACCGGGAGGGCGCTCAGCGACAGCGCCGCGATCTaGCCGGCCAGCGGCGGGATGTCCATAGCGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DTGRALSDSAAI*PASGGMSIAAA Trigger: AGCCGCCGCTATGGACATCCCGCCGCTGGCCGGCAAGATCGCGGCGCTGTCGCTGAGCGCCCTCCCGGTGTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000586107.1 ENST00000591001.5 |
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| CDS TCA 72 bp | CCACCCACAGGGGGTGCGAGAGCGCCGAGACGTGGTTaGGCGCGTAGGACACCGGGAGGGCGCTCAGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: PPTGGARAPRRG*ARRTPGGRSAT Trigger: TGTCGCTGAGCGCCCTCCCGGTGTCCTACGCGCTCAACCACGTCTCGGCGCTCTCGCACCCCCTGTGGGTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000591001.5 |
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| CDS TCA 72 bp | AGGTATGGCTCTCCTGCGAGAGCGCCGAGACGTGGTTaGGCGCGTAGGACACCGGGAGGGCGCTCAGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: RYGSPARAPRRG*ARRTPGGRSAT Trigger: TGTCGCTGAGCGCCCTCCCGGTGTCCTACGCGCTCAACCACGTCTCGGCGCTCTCGCAGGAGAGCCATACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586107.1 |
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| CDS CCA 72 bp | ACCATGTTGGCGGTGCAGCGGGTTAGCGCCCGGGGCTaGCTGAAGACCTTCATGCCAGCCCAGCATGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TMLAVQRVSARG*LKTFMPAQHGT Trigger: GGTGCCATGCTGGGCTGGCATGAAGGTCTTCAGCCAGCCCCGGGCGCTAACCCGCTGCACCGCCAACATGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000389363.5 |
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| CDS GCA 72 bp | AGGCCAGCAGGTGGGGGCCCAGCGCATACAGCAGATTaGACACGAAGAAGCAGCCCCAGGTGTCCTCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPAGGGPAHTAD*TRRSSPRCPQA Trigger: TGCCTGAGGACACCTGGGGCTGCTTCTTCGTGTGCAATCTGCTGTATGCGCTGGGCCCCCACCTGCTGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS TCA 72 bp | AGGCCCAGTCTGGAAGCCAGGAGCAACCAGGGAAGGTaGGAGCATAGGCAGCCAGGCCGCAGAAAGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RPSLEARSNQGR*EHRQPGRRKAG Trigger: TCCTGCCTTTCTGCGGCCTGGCTGCCTATGCTCTCACCTTCCCTGGTTGCTCCTGGCTTCCAGACTGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS TCA 72 bp | CTGGCCACCCCTGGCTGGAGCCCTAGAGAGGCGTCCTaGTTTCTCCTACAGACACTTCTGGCTCCACCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LATPGWSPREAS*FLLQTLLAPPC Trigger: GCAGGGTGGAGCCAGAAGTGTCTGTAGGAGAAATCAGGACGCCTCTCTAGGGCTCCAGCCAGGGGTGGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS CCA 72 bp | GTCCTGAGTCCACAGCTCTCTCAATGCTGCTTCTTGTaGAGGGCTAGGGGGTCGGAGGGTGGTGGCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSPQLSQCCFL*RARGSEGGGWW Trigger: CCACCAGCCACCACCCTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CCA 72 bp | GTAGCAGATGAAGACTCCGTGCGCTGTGCGCAGGTATaGCTCTCCCTGTGGGGGCAGGTGGGAGACTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VADEDSVRCAQV*LSLWGQVGDSD Trigger: GTCTGAGTCTCCCACCTGCCCCCACAGGGAGAGCCATACCTGCGCACAGCGCACGGAGTCTTCATCTGCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS CAA 72 bp | TGGGTCCTGAGTCCACAGCTCTCTCAATGCTGCTTCTaGTGGAGGGCTAGGGGGTCGGAGGGTGGTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WVLSPQLSQCCF*WRARGSEGGGW Trigger: CCAGCCACCACCCTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS GCA 72 bp | ACAGAGTCCTGGGTCCTGAGTCCACAGCTCTCTCAATaGTGCTTCTTGTGGAGGGCTAGGGGGTCGGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TESWVLSPQLSQ*CFLWRARGSEG Trigger: ACCCTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGACCCAGGACTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CCA 72 bp | TCCGGTATCTCTTCCTTCTGCAGATGGCGCCGGCCATaGCCAGGTAGAGGAGGTAGTGAACAGTGCCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGISSFCRWRRP*PGRGGSEQCHP Trigger: GGGATGGCACTGTTCACTACCTCCTCTACCTGGCCATGGCCGGCGCCATCTGCAGAAGGAAGAGATACCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000389363.5 ENST00000586107.1 |
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| CDS CCA 72 bp | CTGGCCGATGCCTCCAGCAAACACCAAGGCCCAGTCTaGAAGCCAGGAGCAACCAGGGAAGGTGAGAGCATA | + |
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Preference number: 6 (lower is better) Translates to: LADASSKHQGPV*KPGATREGESI Trigger: TATGCTCTCACCTTCCCTGGTTGCTCCTGGCTTCCAGACTGGGCCTTGGTGTTTGCTGGAGGCATCGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CAA 90 bp | ACAGAGTCCTGGGTCCTGAGTCCACAGCTCTCTCAATGCTGCTTCTaGTGGAGGGCTAGGGGGTCGGAGGGTGGTGGCTGGTGGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TESWVLSPQLSQCCF*WRARGSEGGGWWKN Trigger: ATTCTTCCACCAGCCACCACCCTCCGACCCCCTAGCCCTCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGACCCAGGACTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS TCA 72 bp | ATTCCGGTATCTCTTCCTGAGCAGGGGATGGAGGGGTaGCCAGCAGGTAGTCACTCCGTAATCTCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: IPVSLPEQGMEG*PAGSHSVISEP Trigger: GGGCTCTGAGATTACGGAGTGACTACCTGCTGGTCACCCCTCCATCCCCTGCTCAGGAAGAGATACCGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS TCA 72 bp | AGGGCTGACTGGGCACGTAAACAGAGTCCTGGGTCCTaGGTCCACAGCTCTCTCAATGCTGCTTCTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RADWARKQSPGS*VHSSLNAASCG Trigger: TCCACAAGAAGCAGCATTGAGAGAGCTGTGGACTCAGGACCCAGGACTCTGTTTACGTGCCCAGTCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000590431.6 ENST00000591001.5 |
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| CDS CCA 72 bp | CTGCACCTTAGGGTAGGCCACAGGGTCCCGCAGGTATaGCTCATACTGGTAGATATAGACAAAGCAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: LHLRVGHRVPQV*LILVDIDKAGI Trigger: GATGCCTGCTTTGTCTATATCTACCAGTATGAGCCATACCTGCGGGACCCTGTGGCCTACCCTAAGGTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000389363.5 ENST00000431465.2 ENST00000591001.5 |
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| CDS CCA 72 bp | TTCCCAGCTCCGGGTCCCTTTCAGTTTTGCCCAGGATaGAAGGGACAACAGGGAGTTGAACGGGGAAATAAC | + |
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Preference number: 6 (lower is better) Translates to: FPAPGPFQFCPG*KGQQGVERGNN Trigger: GTTATTTCCCCGTTCAACTCCCTGTTGTCCCTTCCATCCTGGGCAAAACTGAAAGGGACCCGGAGCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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| CDS CCA 72 bp | GAAATAACAGTGAGACCCTCTGTCCAAGAACAGAAGTaGCTGCCCAGGCACAGGGTGGATGTAAGCAATGCT | + |
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Preference number: 6 (lower is better) Translates to: EITVRPSVQEQK*LPRHRVDVSNA Trigger: AGCATTGCTTACATCCACCCTGTGCCTGGGCAGCCACTTCTGTTCTTGGACAGAGGGTCTCACTGTTATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431465.2 ENST00000591001.5 |
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