Pregenerated sensors for TM6SF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136404Ensembl transcript IDs: ENST00000258909.13, ENST00000322019.14, ENST00000379384.9, ENST00000379390.10, ENST00000561551.1, ENST00000564988.5, ENST00000565774.5, ENST00000565982.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGAGAAAACTGAGCCTGAGCCAGACCTCCAGCATGTATCAATGTaGTGTCAGGCATCCAGGAACATCCAGGAACCACTAAGCCATACA | + |
|
Preference number: 1 (lower is better) Translates to: CEKTEPEPDLQHVSM*CQASRNIQEPLSHT Trigger: TGTATGGCTTAGTGGTTCCTGGATGTTCCTGGATGCCTGACATCACATTGATACATGCTGGAGGTCTGGCTCAGGCTCAGTTTTCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258909.13 ENST00000379384.9 |
||
| 3UTR GCA 90 bp | TTCTTCAGGGACTCTGTAGACATAAGCAGTTCTAGCATGAAGAGATaGACCAATGTGAGAAAACTGAGCCTGAGCCAGACCTCCAGCATG | + |
|
Preference number: 1 (lower is better) Translates to: FFRDSVDISSSSMKR*TNVRKLSLSQTSSM Trigger: CATGCTGGAGGTCTGGCTCAGGCTCAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGAACTGCTTATGTCTACAGAGTCCCTGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR GCA 90 bp | ATTTATTATCTCATCTTTTCAAGACTCATCAACAGTCCATTCAGGTaGAACTTGCTAAATCCTCTGGCTCTGGGTCTCTTGCAAAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: IYYLIFSRLINSPFR*NLLNPLALGLLQKE Trigger: TTCCTTTTGCAAGAGACCCAGAGCCAGAGGATTTAGCAAGTTGCACCTGAATGGACTGTTGATGAGTCTTGAAAAGATGAGATAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR TCA 90 bp | ATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGTATaGGAAGAGAGTGAAATGGGACAAAATATCAGTACCAGTATAACA | + |
|
Preference number: 1 (lower is better) Translates to: IQCRARMYIFLSTHV*EESEMGQNISTSIT Trigger: TGTTATACTGGTACTGATATTTTGTCCCATTTCACTCTCTTCTCATACGTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR-3UTR TCA 90 bp | GGATTCAGCTCCTCACGGTTGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGTCCCAGAGGCCTCCTCTaGTGCCTTGCCCCATGGATC | + |
|
Preference number: 2 (lower is better) Translates to: GFSSSRLLDWRPQFLMSCPRGLL*CLAPWI Trigger: GATCCATGGGGCAAGGCATCAGAGGAGGCCTCTGGG...ACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTCAGCAGGAACTCAGATCATCTTAAGGCTCAACTGGGGATGGATCCTCTTCACTCAAATTGTTCCTaGCAGGATTCAGCTCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GVSRNSDHLKAQLGMDPLHSNCS*QDSAPH Trigger: GTGAGGAGCTGAATCCTGCCAGGAACAATTTGAGTG...AAGAGGATCCATCCCCAGTTGAGCCTTAAGATGATCTGAGTTCCTGCTGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR CAA 90 bp | TATCTCATCTTTTCAAGACTCATCAACAGTCCATTCAGGTGCAACTaGCTAAATCCTCTGGCTCTGGGTCTCTTGCAAAAGGAACTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YLIFSRLINSPFRCN*LNPLALGLLQKELR Trigger: TCTCAGTTCCTTTTGCAAGAGACCCAGAGCCAGAGGATTTAGCAAGTTGCACCTGAATGGACTGTTGATGAGTCTTGAAAAGATGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR-3UTR TCA 90 bp | TTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGCAGCATGTATCAATGTaGTGTCAGGCATCCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FYEELWFVDTTIGQELRKQHVSM*CQASRN Trigger: GTTCCTGGATGCCTGACATCACATTGATACATGCTG...CTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258909.13 ENST00000379384.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTCAGGCAAAATCCAGTTaGCAGGAGGAGACACACAAC | + |
|
Preference number: 2 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVQAKSS*QEETHN Trigger: GTTGTGTGTCTCCTCCTGGCAACTGGATTTTGCCTG...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| 3UTR-3UTR CCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTATCGGTTGCTAAGGTaGCAAAGGCACACACCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TQYHIAHTYSAEQECTYSYRLLR*QRHTPG Trigger: ACCTGGTGTGTGCCTTTGCCACCTTAGCAACCGATA...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| 3UTR-3UTR TCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCAGCATGTATCAATGTaGTGTCAGGCATCCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PYSSHIQCRARMYIFLSTQHVSM*CQASRN Trigger: GTTCCTGGATGCCTGACATCACATTGATACATGCTG...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258909.13 ENST00000379384.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGTCTAGCATGAAGAGATaGACCAATGTGAGAAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: FYEELWFVDTTIGQELRKSSMKR*TNVRKL Trigger: CAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGA...CTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR-3UTR CCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACCCCAATATAGGCCAATaGTTCTATAAGTTTCCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: YSSHIQCRARMYIFLSTHPNIGQ*FYKFPR Trigger: GCGGGGAAACTTATAGAACCATTGGCCTATATTGGG...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| 3UTR-3UTR TCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTAAGCAATCAAACCTCTaGACAGGCAAAATCCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: TQYHIAHTYSAEQECTYSKQSNL*TGKIQL Trigger: CAACTGGATTTTGCCTGTTCAGAGGTTTGATTGCTT...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTCGTATGAGAAGAGAGTaGAATGGGACAAAATATCAG | + |
|
Preference number: 2 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVRMRRE*NGTKYQ Trigger: CTGATATTTTGTCCCATTTCACTCTCTTCTCATACG...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR-3UTR TCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCTGCCTTTGTTTTTATaGAGAACTCTGGTTTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PYSSHIQCRARMYIFLSTLPLFL*RTLVCR Trigger: TCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAG...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACCGTATGAGAAGAGAGTaGAATGGGACAAAATATCAG | + |
|
Preference number: 2 (lower is better) Translates to: KIYTIPYSSHIQCRARMYRMRRE*NGTKYQ Trigger: CTGATATTTTGTCCCATTTCACTCTCTTCTCATACG...GTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR-3UTR GCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATCTAGCATGAAGAGATaGACCAATGTGAGAAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: IYTIPYSSHIQCRARMYISSMKR*TNVRKL Trigger: CAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGA...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR TCA 72 bp | ACTGAGCCTGAGCCAGACCTCCAGCATGTATCAATGTaGTGTCAGGCATCCAGGAACATCCAGGAACCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TEPEPDLQHVSM*CQASRNIQEPL Trigger: TAGTGGTTCCTGGATGTTCCTGGATGCCTGACATCACATTGATACATGCTGGAGGTCTGGCTCAGGCTCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258909.13 ENST00000379384.9 |
||
| 3UTR GCA 72 bp | GACTCTGTAGACATAAGCAGTTCTAGCATGAAGAGATaGACCAATGTGAGAAAACTGAGCCTGAGCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: DSVDISSSSMKR*TNVRKLSLSQT Trigger: GGTCTGGCTCAGGCTCAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGAACTGCTTATGTCTACAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| 3UTR GCA 72 bp | TCTGGGTCTCTTGCAAAAGGAACTGAGATACCAAAATaGAGTCCAGGTGTCAGCAGGAACTCAGATCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGSLAKGTEIPK*SPGVSRNSDHL Trigger: AAGATGATCTGAGTTCCTGCTGACACCTGGACTGCATTTTGGTATCTCAGTTCCTTTTGCAAGAGACCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCATTTATTATCTCATCTTTTCAAGACTCATCAACAGTCCATTCAGGTGCACTAAGATCACTCAAATaGTTCCTGGCAGGATTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AAFIISSFQDSSTVHSGALRSLK*FLAGFS Trigger: GCTGAATCCTGCCAGGAACAATTTGAGTGATCTTAG...TGCACCTGAATGGACTGTTGATGAGTCTTGAAAAGATGAGATAATAAATGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR TCA 72 bp | AGAGCAAGAATGTACATATTCTTAAGTACTCACGTATaGGAAGAGAGTGAAATGGGACAAAATATCAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: RARMYIFLSTHV*EESEMGQNIST Trigger: GGTACTGATATTTTGTCCCATTTCACTCTCTTCTCATACGTGAGTACTTAAGAATATGTACATTCTTGCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | AGGATTCAGCTCCTCACGGTTGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGCCCAGAGGCCTCCTCTaGTGCCTTGCCCCATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RIQLLTVVGLEASVPHELPRGLL*CLAPWI Trigger: GATCCATGGGGCAAGGCATCAGAGGAGGCCTCTGGG...CAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR TCA 90 bp | TTCAGCTCCTCACGGTTGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGTTTCAGCATGGCAGCTGGCTaGGCCAGACCTCCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSSSRLLDWRPQFLMSCFSMAAG*ARPPAC Trigger: ACATGCTGGAGGTCTGGCTCAGCCAGCTGCCATGCT...GAAACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGAACTGAGATACCAAAATGCAGTCCAGGTGTCAGCAGGAACTCAGATCAGGCAGCTCACAGCATaGCAGCTGGCTGAGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QKELRYQNAVQVSAGTQIRQLTA*QLAEPD Trigger: GTCTGGCTCAGCCAGCTGCCATGCTGTGAGCTGCCT...GATCTGAGTTCCTGCTGACACCTGGACTGCATTTTGGTATCTCAGTTCCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR GCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTCGCCCCCTTGGCGCTTaGCCTTCGAGGCGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVRPLGA*PSRRLS Trigger: GCTGAGGCGCCTCGAAGGGCAAGCGCCAAGGGGGCG...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | GGATTCAGCTCCTCACGGTTGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGTACTGAGATACCAAAATaGAGTCCAGGTGTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSSRLLDWRPQFLMSCTEIPK*SPGVSR Trigger: CCTGCTGACACCTGGACTGCATTTTGGTATCTCAGT...ACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR CCA 90 bp | GATTTTTGCTTCTTCAGGGACTCTGTAGACATAAGCAGTTCTAGCATGAAGAGAGCACGAAGACCCCGGTaGCCGCAGAGGCACTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: DFCFFRDSVDISSSSMKRARRPR*PQRHSS Trigger: CGATGAGTGCCTCTGCGGCCACCGGGGTCTTCGTGC...TCTCTTCATGCTAGAACTGCTTATGTCTACAGAGTCCCTGAAGAAGCAAAAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | GGATTCAGCTCCTCACGGTTGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGTCACTCAAATTGTTCCTaGCAGGATTCAGCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSSRLLDWRPQFLMSCHSNCS*QDSAPH Trigger: GTGAGGAGCTGAATCCTGCCAGGAACAATTTGAGTG...ACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| 3UTR CAA 72 bp | CTCAAATTGTTCCTGGCAGGATTCAGCTCCTCACGGTaGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKLFLAGFSSSR*LDWRPQFLMSC Trigger: ACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAATCCTGCCAGGAACAATTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR TCA 90 bp | ACCAATGTGAGAAAACTGAGCCTGAGCCAGACCTCCAGCATGTATCAATGTGATCTACCAGGAACAGGATaGGGGCAGCAACCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: TNVRKLSLSQTSSMYQCDLPGTG*GQQPLQ Trigger: TTGTAGGGGTTGCTGCCCTCATCCTGTTCCTGGTAG...ATCACATTGATACATGCTGGAGGTCTGGCTCAGGCTCAGTTTTCTCACATTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | AATGGTTCTATAAGTTTCCCCGCTTATCGGTTGCTAAGGTGGCAAAGGCACACAGACACGAGCCAGCAGTaGTACCAGGAACAGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: NGSISFPAYRLLRWQRHTDTSQQ*YQEQDE Trigger: CTCATCCTGTTCCTGGTAGCACTGCTGGCTCGTGTC...TGTGTGCCTTTGCCACCTTAGCAACCGATAAGCGGGGAAACTTATAGAACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| 3UTR CAA 72 bp | AAATTGTTCCTGGCAGGATTCAGCTCCTCACGGTTGTaGGACTGGAGGCCTCAGTTCCTCATGAGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLFLAGFSSSRL*DWRPQFLMSCF Trigger: GAAACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAATCCTGCCAGGAACAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR GCA 90 bp | TATAATCGGCAGAGCTCAGATGGGCAATCCAAAGCAATCAAACCTCTGAACAGGCTCCCATGCTATGGCTaGCACCATCACCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: YNRQSSDGQSKAIKPLNRLPCYG*HHHQVH Trigger: ATGTACCTGGTGATGGTGGCAGCCATAGCATGGGAG...CCTGTTCAGAGGTTTGATTGCTTTGGATTGCCCATCTGAGCTCTGCCGATTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTGCACGAAGACCCCGGTaGCCGCAGAGGCACTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSARRPR*PQRHSS Trigger: CGATGAGTGCCTCTGCGGCCACCGGGGTCTTCGTGC...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | ACCAATGTGAGAAAACTGAGCCTGAGCCAGACCTCCAGCATGTATCAATGTGATACACACCAGGTGAACTaGCTTACTCCCATGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: TNVRKLSLSQTSSMYQCDTHQVN*LTPMLW Trigger: CCATAGCATGGGAGTAAGTCAGTTCACCTGGTGTGT...ATCACATTGATACATGCTGGAGGTCTGGCTCAGGCTCAGTTTTCTCACATTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACAGCACGAAGACCCCGGTaGCCGCAGAGGCACTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KFTQYHIAHTYSAEQECTARRPR*PQRHSS Trigger: CGATGAGTGCCTCTGCGGCCACCGGGGTCTTCGTGC...TGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TATAATCGGCAGAGCTCAGATGGGCAATCCAAAGCAATCAAACCTCTGAACAGGTATCGGTTGCTAAGGTaGCAAAGGCACACACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YNRQSSDGQSKAIKPLNRYRLLR*QRHTPG Trigger: ACCTGGTGTGTGCCTTTGCCACCTTAGCAACCGATA...CCTGTTCAGAGGTTTGATTGCTTTGGATTGCCCATCTGAGCTCTGCCGATTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTTATTATCTCATCTTTTCAAGACTCATCAACAGTCCATTCAGGTGCACCATGGATCTCACCATaGGGCAGCTCACAGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AAFIISSFQDSSTVHSGAPWISP*GSSQHG Trigger: GCCATGCTGTGAGCTGCCTCATGGTGAGATCCATGG...TGCACCTGAATGGACTGTTGATGAGTCTTGAAAAGATGAGATAATAAATGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR GCA 90 bp | ACCAATGTGAGAAAACTGAGCCTGAGCCAGACCTCCAGCATGTATCAATGTGATGATCATGTGCCCATATaGGGTGTTCAGATACGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNVRKLSLSQTSSMYQCDDHVPI*GVQIRF Trigger: GAACCGTATCTGAACACCGCATATGGGCACATGATC...ATCACATTGATACATGCTGGAGGTCTGGCTCAGGCTCAGTTTTCTCACATTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | TTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGCTCCCATGCTATGGCTaGCACCATCACCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FYEELWFVDTTIGQELRKLPCYG*HHHQVH Trigger: ATGTACCTGGTGATGGTGGCAGCCATAGCATGGGAG...CTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCGTCCAGGAATCATGCTaGGCCGCCAGGTGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FFCLCFYEELWFVDTTIGVQESC*AARWLK Trigger: CTTCAACCACCTGGCGGCCCAGCATGATTCCTGGAC...GCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGTCCAGGAATCATGCTaGGCCGCCAGGTGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSSHIQCRARMYIFLSTHVQESC*AARWLK Trigger: CTTCAACCACCTGGCGGCCCAGCATGATTCCTGGAC...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGCTACCAGGAACAGGATaGGGGCAGCAACCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: MKHIHLICKSYSSSLHSLLPGTG*GQQPLQ Trigger: TTGTAGGGGTTGCTGCCCTCATCCTGTTCCTGGTAG...CAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTCTACCAGGAACAGGATaGGGGCAGCAACCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVLPGTG*GQQPLQ Trigger: TTGTAGGGGTTGCTGCCCTCATCCTGTTCCTGGTAG...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | AATGGTTCTATAAGTTTCCCCGCTTATCGGTTGCTAAGGTGGCAAAGGCACACAAAGCAATCAAACCTCTaGACAGGCAAAATCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NGSISFPAYRLLRWQRHTKQSNL*TGKIQL Trigger: CAACTGGATTTTGCCTGTTCAGAGGTTTGATTGCTT...TGTGTGCCTTTGCCACCTTAGCAACCGATAAGCGGGGAAACTTATAGAACCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR GCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACATAGTCCAGGAATCATaGTGGGCCGCCAGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSSHIQCRARMYIFLSTHIVQES*WAARWL Trigger: CAACCACCTGGCGGCCCAGCATGATTCCTGGACTAT...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTATAGTCCAGGAATCATaGTGGGCCGCCAGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSIVQES*WAARWL Trigger: CAACCACCTGGCGGCCCAGCATGATTCCTGGACTAT...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTGACACGAGCCAGCAGTaGTACCAGGAACAGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PYSSHIQCRARMYIFLSTDTSQQ*YQEQDE Trigger: CTCATCCTGTTCCTGGTAGCACTGCTGGCTCGTGTC...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTGACACGAGCCAGCAGTaGTACCAGGAACAGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSDTSQQ*YQEQDE Trigger: CTCATCCTGTTCCTGGTAGCACTGCTGGCTCGTGTC...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | TTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGTTCCCATGCTATGGCTaGCACCATCACCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FYEELWFVDTTIGQELRKFPCYG*HHHQVH Trigger: ATGTACCTGGTGATGGTGGCAGCCATAGCATGGGAA...CTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258909.13 |
||
| CDS-3UTR TCA 90 bp | AAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACACTACCAGGAACAGGATaGGGGCAGCAACCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KFTQYHIAHTYSAEQECTLPGTG*GQQPLQ Trigger: TTGTAGGGGTTGCTGCCCTCATCCTGTTCCTGGTAG...TGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | GATTTTTGCTTCTTCAGGGACTCTGTAGACATAAGCAGTTCTAGCATGAAGAGAGATCATGTGCCCATATaGGGTGTTCAGATACGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFCFFRDSVDISSSSMKRDHVPI*GVQIRF Trigger: GAACCGTATCTGAACACCGCATATGGGCACATGATC...TCTCTTCATGCTAGAACTGCTTATGTCTACAGAGTCCCTGAAGAAGCAAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTATGCCAGCATTCCCATaGTATGGCTGCCACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSMPAFP*YGCHHH Trigger: GTGATGGTGGCAGCCATAGCATGGGAATGCTGGCAT...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258909.13 |
||
| CDS-3UTR GCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACCTCCCATGCTATGGCTaGCACCATCACCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: YSSHIQCRARMYIFLSTHLPCYG*HHHQVH Trigger: ATGTACCTGGTGATGGTGGCAGCCATAGCATGGGAG...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACAGCATTCCCATGCTATaGCTGCCACCATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSSHIQCRARMYIFLSTHSIPML*LPPSPG Trigger: ACCTGGTGATGGTGGCAGCCATAGCATGGGAATGCT...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258909.13 |
||
| CDS-3UTR CCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTTTTCCTCCCATGCTATaGCTGCCACCATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVFPPML*LPPSPG Trigger: ACCTGGTGATGGTGGCAGCCATAGCATGGGAGGAAA...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACCTTACTCCCATGCTATaGCTGCCACCATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSSHIQCRARMYIFLSTHLTPML*LPPSPG Trigger: ACCTGGTGATGGTGGCAGCCATAGCATGGGAGTAAG...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR GCA 90 bp | AGGAACATCCAGGAACCACTAAGCCATACAGTGCAGTCACAAAGTAAGGAACAGGTTACTCCTCCAGTCTaGATTCACTGTTTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RNIQEPLSHTVQSQSKEQVTPPV*IHCFEF Trigger: AAATTCAAAACAGTGAATGCAGACTGGAGGAGTAAC...CTGTTCCTTACTTTGTGACTGCACTGTATGGCTTAGTGGTTCCTGGATGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTCAGGCAAAATCCAGTTaGCAGGAGGAGACACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSQAKSS*QEETHN Trigger: GTTGTGTGTCTCCTCCTGGCAACTGGATTTTGCCTG...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTACTGACTTACTCCCATaGTATGGCTGCCACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVTDLLP*YGCHHH Trigger: GTGATGGTGGCAGCCATAGCATGGGAGTAAGTCAGT...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CCA 90 bp | AAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATTTCCTCCCATGCTATaGCTGCCACCATCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KFTQYHIAHTYSAEQECTFPPML*LPPSPG Trigger: ACCTGGTGATGGTGGCAGCCATAGCATGGGAGGAAA...TGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGCCCAATATAGGCCAATaGTTCTATAAGTTTCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FYEELWFVDTTIGQELRKPNIGQ*FYKFPR Trigger: GCGGGGAAACTTATAGAACCATTGGCCTATATTGGG...CTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTGATCATGTGCCCATATaGGGTGTTCAGATACGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVDHVPI*GVQIRF Trigger: GAACCGTATCTGAACACCGCATATGGGCACATGATC...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTGATCATGTGCCCATATaGGGTGTTCAGATACGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSDHVPI*GVQIRF Trigger: GAACCGTATCTGAACACCGCATATGGGCACATGATC...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACATAAGTTTCCTCCCATaGTATGGCTGCCACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSSHIQCRARMYIFLSTHISFLP*YGCHHH Trigger: GTGATGGTGGCAGCCATAGCATGGGAGGAAACTTAT...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTATAAGTTTCCTCCCATaGTATGGCTGCCACCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSISFLP*YGCHHH Trigger: GTGATGGTGGCAGCCATAGCATGGGAGGAAACTTAT...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATACAGGCAAAATCCAGTTaGCAGGAGGAGACACACAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYIQAKSS*QEETHN Trigger: GTTGTGTGTCTCCTCCTGGCAACTGGATTTTGCCTG...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR TCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATACAGCATGTATCAATGTaGTGTCAGGCATCCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYIQHVSM*CQASRN Trigger: GTTCCTGGATGCCTGACATCACATTGATACATGCTG...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | TTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGAAGCGTATGAGAAGAGAGTaGAATGGGACAAAATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYEELWFVDTTIGQELRKRMRRE*NGTKYQ Trigger: CTGATATTTTGTCCCATTTCACTCTCTTCTCATACG...CTTCCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | GATTTTTGCTTCTTCAGGGACTCTGTAGACATAAGCAGTTCTAGCATGAAGAGATCTAGCATGAAGAGATaGACCAATGTGAGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DFCFFRDSVDISSSSMKRSSMKR*TNVRKL Trigger: CAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGA...TCTCTTCATGCTAGAACTGCTTATGTCTACAGAGTCCCTGAAGAAGCAAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCAAGAGCTGAGGCCCTACAATGTTTCCTaGCACAAAAACAACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: CFYEELWFVDTTIGQELRPYNVS*HKNNNT Trigger: AGTGTTGTTGTTTTTGTGCCAGGAAACATTGTAGGG...CCTCAGCTCTTGGCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATCGGCAGAGCTCAGATaGGCAATCCAAAGCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYISAELR*AIQSNQ Trigger: TTGATTGCTTTGGATTGCCCATCTGAGCTCTGCCGA...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR CCA 90 bp | AAAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACTCGGCAGAGCTCAGATaGGCAATCCAAAGCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: KIYTIPYSSHIQCRARMYSAELR*AIQSNQ Trigger: TTGATTGCTTTGGATTGCCCATCTGAGCTCTGCCGA...GTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR CCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCCCAATATAGGCCAATaGTTCTATAAGTTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PYSSHIQCRARMYIFLSTPNIGQ*FYKFPP Trigger: GGGAGGAAACTTATAGAACCATTGGCCTATATTGGG...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGCGTATGAGAAGAGAGTaGAATGGGACAAAATATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKHIHLICKSYSSSLHSLRMRRE*NGTKYQ Trigger: CTGATATTTTGTCCCATTTCACTCTCTTCTCATACG...CAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCTTAAGTACTCACGTATaGGAAGAGAGTGAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFCLCFYEELWFVDTTIGLSTHV*EESEMG Trigger: TCCCATTTCACTCTCTTCTCATACGTGAGTACTTAA...GCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTTTAAGTACTCACGTATaGGAAGAGAGTGAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PYSSHIQCRARMYIFLSTLSTHV*EESEMG Trigger: TCCCATTTCACTCTCTTCTCATACGTGAGTACTTAA...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTAAGTACTCACGTATaGGAAGAGAGTGAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MKHIHLICKSYSSSLHSLLSTHV*EESEMG Trigger: TCCCATTTCACTCTCTTCTCATACGTGAGTACTTAA...CAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | AAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACAAAGCAATCAAACCTCTaGACAGGCAAAATCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KFTQYHIAHTYSAEQECTKQSNL*TGKIQL Trigger: CAACTGGATTTTGCCTGTTCAGAGGTTTGATTGCTT...TGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR GCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTTCTAGCATGAAGAGATaGACCAATGTGAGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PYSSHIQCRARMYIFLSTSSMKR*TNVRKL Trigger: CAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGA...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTCTAGCATGAAGAGATaGACCAATGTGAGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TQYHIAHTYSAEQECTYSSSMKR*TNVRKL Trigger: CAGTTTTCTCACATTGGTGCATCTCTTCATGCTAGA...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATACCCAATATAGGCCAATaGTTCTATAAGTTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYIPNIGQ*FYKFPP Trigger: GGGAGGAAACTTATAGAACCATTGGCCTATATTGGG...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCCCTACAATGTTTCCTaGCACAAAAACAACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PYSSHIQCRARMYIFLSTPYNVS*HKNNNT Trigger: AGTGTTGTTGTTTTTGTGCCAGGAAACATTGTAGGG...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR TCA 90 bp | ATGAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGCTGCCTTTGTTTTTATaGAGAACTCTGGTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKHIHLICKSYSSSLHSLLPLFL*RTLVCR Trigger: TCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAG...CAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | GAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGTTCTGCCTTTGTTTTTATaGAGAACTCTGGTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAYSSYLQKLLLQSAFTVLPLFL*RTLVCR Trigger: TCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAG...AACAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCCTGCCTTTGTTTTTATaGAGAACTCTGGTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FFCLCFYEELWFVDTTIGLPLFL*RTLVCR Trigger: TCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAG...GCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTAAGTACTCACGTATaGGAAGAGAGTGAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYILSTHV*EESEMG Trigger: TCCCATTTCACTCTCTTCTCATACGTGAGTACTTAA...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | CCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTAGAATAGAACATATATaGCAGCATTCCCATGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: PYSSHIQCRARMYIFLSTRIEHI*QHSHAM Trigger: CATAGCATGGGAATGCTGGCATATATGTTCTATTCT...AGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258909.13 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCGTTACTCCTCCAGTCTaGATTCACTGTTTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FFCLCFYEELWFVDTTIGVTPPV*IHCFEF Trigger: AAATTCAAAACAGTGAATGCAGACTGGAGGAGTAAC...GCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR TCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATACTGCCTTTGTTTTTATaGAGAACTCTGGTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYILPLFL*RTLVCR Trigger: TCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAG...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATAGTTACTCCTCCAGTCTaGATTCACTGTTTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: IYTIPYSSHIQCRARMYIVTPPV*IHCFEF Trigger: AAATTCAAAACAGTGAATGCAGACTGGAGGAGTAAC...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR GCA 90 bp | AAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACAGTTACTCCTCCAGTCTaGATTCACTGTTTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KFTQYHIAHTYSAEQECTVTPPV*IHCFEF Trigger: AAATTCAAAACAGTGAATGCAGACTGGAGGAGTAAC...TGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTGCCTTTGTTTTTATGAAGAACTCTGGTTTGTAGATACAACGATAGGCATCTACAATGTTTCCTaGCACAAAAACAACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FFCLCFYEELWFVDTTIGIYNVS*HKNNNT Trigger: AGTGTTGTTGTTTTTGTGCCAGGAAACATTGTAGAT...GCCTATCGTTGTATCTACAAACCAGAGTTCTTCATAAAAACAAAGGCAGAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379390.10 |
||
| CDS TCA 90 bp | TTTCCCCGCTTATCGGTTGCTAAGGTGGCAAAGGCACACACCAGGTaGACTGACTTACTCCCATGCTATGGCTGCCACCATCACCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPRLSVAKVAKAHTR*TDLLPCYGCHHHQV Trigger: TACCTGGTGATGGTGGCAGCCATAGCATGGGAGTAAGTCAGTTCACCTGGTGTGTGCCTTTGCCACCTTAGCAACCGATAAGCGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CAA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTGCGCCCCCTTGGCGCTaGCCCTTCGAGGCGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQYHIAHTYSAEQECTYSAPPWR*PFEAPQ Trigger: CTGAGGCGCCTCGAAGGGCAAGCGCCAAGGGGGCGC...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | ACCAATGTGAGAAAACTGAGCCTGAGCCAGACCTCCAGCATGTATCAATGTGATCGGGGTGGTTTTCTTTaGACGAGGACACGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TNVRKLSLSQTSSMYQCDRGGFL*TRTRAS Trigger: GCTGGCTCGTGTCCTCGTCAAAAGAAAACCACCCCG...ATCACATTGATACATGCTGGAGGTCTGGCTCAGGCTCAGTTTTCTCACATTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | TTCAGCTCCTCACGGTTGTTGGACTGGAGGCCTCAGTTCCTCATGAGTTGTTTCCTAAGATCACTCAAATaGTTCCTGGCAGGATTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSSRLLDWRPQFLMSCFLRSLK*FLAGFS Trigger: GCTGAATCCTGCCAGGAACAATTTGAGTGATCTTAG...GAAACAACTCATGAGGAACTGAGGCCTCCAGTCCAACAACCGTGAGGAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS-3UTR CAA 90 bp | GATTTTTGCTTCTTCAGGGACTCTGTAGACATAAGCAGTTCTAGCATGAAGAGACGGGGTGGTTTTCTTTaGACGAGGACACGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFCFFRDSVDISSSSMKRRGGFL*TRTRAS Trigger: GCTGGCTCGTGTCCTCGTCAAAAGAAAACCACCCCG...TCTCTTCATGCTAGAACTGCTTATGTCTACAGAGTCCCTGAAGAAGCAAAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000258909.13 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | AATGGTTCTATAAGTTTCCCCGCTTATCGGTTGCTAAGGTGGCAAAGGCACACACAGCAGGTCTTTCGCTaGGGCTTCTTGAATAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: NGSISFPAYRLLRWQRHTQQVFR*GFLNNL Trigger: AAGGTTATTCAAGAAGCCCAAGCGAAAGACCTGCTG...TGTGTGCCTTTGCCACCTTAGCAACCGATAAGCGGGGAAACTTATAGAACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CAA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACCGGGGTGGTTTTCTTTaGACGAGGACACGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YSSHIQCRARMYIFLSTHRGGFL*TRTRAS Trigger: GCTGGCTCGTGTCCTCGTCAAAAGAAAACCACCCCG...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGCGGGGTGGTTTTCTTTaGACGAGGACACGAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MKHIHLICKSYSSSLHSLRGGFL*TRTRAS Trigger: GCTGGCTCGTGTCCTCGTCAAAAGAAAACCACCCCG...CAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | ACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTTCCCCGCTTATCGGTaGCTAAGGTGGCAAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TQYHIAHTYSAEQECTYSFPAYR*LRWQRH Trigger: GTGCCTTTGCCACCTTAGCAACCGATAAGCGGGGAA...AGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CAA 90 bp | CGGCAGAGCTCAGATGGGCAATCCAAAGCAATCAAACCTCTGAACAGGCAAAATGCATATTCATCTTATTaGCAAAAGTTACTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQSSDGQSKAIKPLNRQNAYSSY*QKLLLQ Trigger: CTGGAGGAGTAACTTTTGCAAATAAGATGAATATGC...ATTTTGCCTGTTCAGAGGTTTGATTGCTTTGGATTGCCCATCTGAGCTCTGCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS-3UTR CAA 90 bp | AAAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACCAGCAGGTCTTTCGCTaGGGCTTCTTGAATAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: KIYTIPYSSHIQCRARMYQQVFR*GFLNNL Trigger: AAGGTTATTCAAGAAGCCCAAGCGAAAGACCTGCTG...GTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000322019.14 ENST00000379384.9 |
||
| CDS-3UTR CAA 90 bp | ATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACATAGTCAATGATTCCATCTaGCTCCAGTCCTATGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: IYTIPYSSHIQCRARMYIVNDSI*LQSYDE Trigger: CTCATCATAGGACTGGAGCAAGATGGAATCATTGAC...TATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | TATAGCTCACACATACAGTGCAGAGCAAGAATGTACATATTCTTAAGTACTCACGCATATTCATCTTATTaGCAAAAGTTACTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YSSHIQCRARMYIFLSTHAYSSY*QKLLLQ Trigger: CTGGAGGAGTAACTTTTGCAAATAAGATGAATATGC...GTGAGTACTTAAGAATATGTACATTCTTGCTCTGCACTGTATGTGTGAGCTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | ATGAAGCATATTCATCTTATTTGCAAAAGTTACTCCTCCAGTCTGCATTCACTGGCATATTCATCTTATTaGCAAAAGTTACTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MKHIHLICKSYSSSLHSLAYSSY*QKLLLQ Trigger: CTGGAGGAGTAACTTTTGCAAATAAGATGAATATGC...CAGTGAATGCAGACTGGAGGAGTAACTTTTGCAAATAAGATGAATATGCTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS-3UTR CAA 90 bp | AAAATTTACACAATACCATATAGCTCACACATACAGTGCAGAGCAAGAATGTACGCATATTCATCTTATTaGCAAAAGTTACTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KIYTIPYSSHIQCRARMYAYSSY*QKLLLQ Trigger: CTGGAGGAGTAACTTTTGCAAATAAGATGAATATGC...GTACATTCTTGCTCTGCACTGTATGTGTGAGCTATATGGTATTGTGTAAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS GCA 72 bp | TCCCGCGGCGGACGGTCCCAGCCCCCTCGGAAAAGTTaGGAGGCTCCCGTCGCGGCGAGCCAACTCCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRGGRSQPPRKS*EAPVAASQLPP Trigger: CGGCGGGAGTTGGCTCGCCGCGACGGGAGCCTCGCAACTTTTCCGAGGGGGCTGGGACCGTCCGCCGCGGGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564988.5 ENST00000565982.1 |
||
| CDS CCA 72 bp | CCGGGATGGCCGAGAGGGACAGCACGAAGACCCCGGTaGCCGCAGAGGCACTCATCGCAGCCGCCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGWPRGTARRPR*PQRHSSQPPRR Trigger: GCGGCGCGGCGGCTGCGATGAGTGCCTCTGCGGCCACCGGGGTCTTCGTGCTGTCCCTCTCGGCCATCCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 |
||
| CDS CAA 72 bp | GTCCCGCGGCGGACGGTCCCAGCCCCCTCGGAAAAGTaGCGAGGCTCCCGTCGCGGCGAGCCAACTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VPRRTVPAPSEK*RGSRRGEPTPA Trigger: GGCGGGAGTTGGCTCGCCGCGACGGGAGCCTCGCAACTTTTCCGAGGGGGCTGGGACCGTCCGCCGCGGGAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000564988.5 ENST00000565982.1 |
||
| CDS CCA 72 bp | TGCCCCATGGATCTCACCATGAGGCAGCTCACAGCATaGCAGCTGGCTGAGCCAGACCTCCAGCATGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: CPMDLTMRQLTA*QLAEPDLQHVS Trigger: TGATACATGCTGGAGGTCTGGCTCAGCCAGCTGCCATGCTGTGAGCTGCCTCATGGTGAGATCCATGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS CAA 90 bp | CCTCAGTTCCTCATGAGTTGTTTCCCAGAGGCCTCCTCTGATGCCTaGCCCCATGGATCTCACCATGAGGCAGCTCACAGCATGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PQFLMSCFPEASSDA*PHGSHHEAAHSMAA Trigger: AGCTGCCATGCTGTGAGCTGCCTCATGGTGAGATCCATGGGGCAAGGCATCAGAGGAGGCCTCTGGGAAACAACTCATGAGGAACTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS CAA 72 bp | CTCATGAGTTGTTTCCCAGAGGCCTCCTCTGATGCCTaGCCCCATGGATCTCACCATGAGGCAGCTCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMSCFPEASSDA*PHGSHHEAAHS Trigger: GCTGTGAGCTGCCTCATGGTGAGATCCATGGGGCAAGGCATCAGAGGAGGCCTCTGGGAAACAACTCATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS TCA 72 bp | CAGCTGGCTGAGCCAGACCTCCAGCATGTATCAATGTaGTGTCAGGCATCCAGGAACATCCAGGAACCACTA | + |
|
Preference number: 6 (lower is better) Translates to: QLAEPDLQHVSM*CQASRNIQEPL Trigger: TAGTGGTTCCTGGATGTTCCTGGATGCCTGACATCACATTGATACATGCTGGAGGTCTGGCTCAGCCAGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561551.1 |
||
| CDS GCA 72 bp | AGCAGAGCCATCCCAGTAGCAGATCATGTGCCCATATaGGGTGTTCAGATACGGTTCACCCTCTCTCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SRAIPVADHVPI*GVQIRFTLSQV Trigger: TACTTGAGAGAGGGTGAACCGTATCTGAACACCGCATATGGGCACATGATCTGCTACTGGGATGGCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 ENST00000564988.5 ENST00000565774.5 ENST00000565982.1 |
||
| CDS CCA 72 bp | GGTTCTATAAGTTTCCCCGCTTATCGGTTGCTAAGGTaGCAAAGGCACACACCAGGTGAACTGACTTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSISFPAYRLLR*QRHTPGELTYS Trigger: GGAGTAAGTCAGTTCACCTGGTGTGTGCCTTTGCCACCTTAGCAACCGATAAGCGGGGAAACTTATAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379384.9 |
||
| CDS CAA 90 bp | ACCCTCTCTCAAGTAGTGTGTCATGAACCCGTCAATGATTCCATCTaGCTCCAGTCCTATGATGAGGTTCACCACGCTGGTAAATCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLSQVVCHEPVNDSI*LQSYDEVHHAGKSK Trigger: TTTGGATTTACCAGCGTGGTGAACCTCATCATAGGACTGGAGCAAGATGGAATCATTGACGGGTTCATGACACACTACTTGAGAGAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000258909.13 ENST00000322019.14 ENST00000379384.9 ENST00000379390.10 ENST00000564988.5 ENST00000565774.5 ENST00000565982.1 |
||