Pregenerated sensors for TM4SF20 (Homo sapiens)
Ensembl gene IDs: ENSG00000168955Ensembl transcript IDs: ENST00000304568.4, ENST00000449706.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAAACTAATTGAAAATTCTCTCCACCTTTCCCAAATCAACCACTaGTATGAGAGTGTTATGCATTTACAACGTGCTTTCTACGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: TKLIENSLHLSQINH*YESVMHLQRAFYVK Trigger: CTTCACGTAGAAAGCACGTTGTAAATGCATAACACTCTCATATCAGTGGTTGATTTGGGAAAGGTGGAGAGAATTTTCAATTAGTTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGATGGGAGAATCACCTaGGCCCAGGAGGTTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: IPYLTSCDELQSKCSQNCDGRIT*AQEVEA Trigger: AGCCTCAACCTCCTGGGCTCAGGTGATTCTCCCATC...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTAGTTCGGGACCAGCCTaGGCAATATGGAAAACCCCC | + |
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Preference number: 2 (lower is better) Translates to: IPYLTSCDELQSKCSQNCSSGPA*AIWKTP Trigger: GGGGGTTTTCCATATTGCCCAGGCTGGTCCCGAACT...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGAGGCTGCAGTAAGCTaGGATAGCACCACTGTACTA | + |
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Preference number: 2 (lower is better) Translates to: IPYLTSCDELQSKCSQNCEAAVS*DSTTVL Trigger: TAGTACAGTGGTGCTATCTCAGCTTACTGCAGCCTC...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTCCCAAATCAACCACTaGTATGAGAGTGTTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: RNTIKRSCPLGAMAHACNSQINH*YESVMH Trigger: ATGCATAACACTCTCATATCAGTGGTTGATTTGGGA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATCTTTTATTTTCAGGATaGCTTCCGTTCCTTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: RNTIKRSCPLGAMAHACNLLFSG*LPFLLI Trigger: GATGAGAAGGAACGGAAGTCATCCTGAAAATAAAAG...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR TCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATCCATTCTGTGCCCGCTaGCCCACTTTTTGGATTTGT | + |
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Preference number: 2 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYPFCAR*PTFWIC Trigger: ACAAATCCAAAAAGTGGGTCAGCGGGCACAGAATGG...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR GCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTATGCATTTACAACGTaGTTTCTACGTGAAGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: RNTIKRSCPLGAMAHACNYAFTT*FLREGL Trigger: CAACCCTTCACGTAGAAAGCACGTTGTAAATGCATA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR GCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATAATTGGGCCATTCTGTaGCCGCTGACCCACTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYNWAIL*PLTHFL Trigger: CAAAAAGTGGGTCAGCGGGCACAGAATGGCCCAATT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTATAACATTTTCCTGTTaGAAATTGGGCCATTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IPYLTSCDELQSKCSQNCITFSC*KLGHSV Trigger: CACAGAATGGCCCAATTTTCAACAGGAAAATGTTAT...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATATACAAAAATTAGCTTaGCATAGTGGCACGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYIQKLA*HSGTHL Trigger: CAGGTGCGTGCCACTATGCCAAGCTAATTTTTGTAT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGATATGAGAGTGTTATaGATTTACAACGTGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: IPYLTSCDELQSKCSQNCDMRVL*IYNVLS Trigger: AGAAAGCACGTTGTAAATGCATAACACTCTCATATC...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR TCA 72 bp | TCAGGCCAGGTGTTCAAAGTGTGTATGAGACATAAATaGATTTTGTGGTTAGACTTGCATCCCATCCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: SGQVFKVCMRHK*ILWLDLHPIPK Trigger: CTTGGGGATGGGATGCAAGTCTAACCACAAAATTCATTTATGTCTCATACACACTTTGAACACCTGGCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATATTTTGTGGTTAGACTaGCATCCCATCCCCAAGATG | + |
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Preference number: 3 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYILWLD*HPIPKM Trigger: CATCTTGGGGATGGGATGCAAGTCTAACCACAAAAT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR TCA 72 bp | AAATTCTCTCCACCTTTCCCAAATCAACCACTGATATaGGAGTGTTATGCATTTACAACGTGCTTTCTACGT | + |
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Preference number: 3 (lower is better) Translates to: KFSPPFPNQPLI*ECYAFTTCFLR Trigger: ACGTAGAAAGCACGTTGTAAATGCATAACACTCTCATATCAGTGGTTGATTTGGGAAAGGTGGAGAGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| 3UTR TCA 72 bp | ATTGAAAATTCTCTCCACCTTTCCCAAATCAACCACTaGTATGAGAGTGTTATGCATTTACAACGTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: IENSLHLSQINH*YESVMHLQRAF Trigger: GAAAGCACGTTGTAAATGCATAACACTCTCATATCAGTGGTTGATTTGGGAAAGGTGGAGAGAATTTTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATGATGGGAGAATCACCTaGGCCCAGGAGGTTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNDGRIT*AQEVEA Trigger: AGCCTCAACCTCCTGGGCTCAGGTGATTCTCCCATC...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTCCAGCCACTCGCCATaGTGTCGTTACTGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNSSHSP*CRYWWV Trigger: AACCCACCAGTAACGACACCATGGCGAGTGGCTGGA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATAGTTCGGGACCAGCCTaGGCAATATGGAAAACCCCC | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNSSGPA*AIWKTP Trigger: GGGGGTTTTCCATATTGCCCAGGCTGGTCCCGAACT...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTAGAACCAGCAGGCTaGATCCATTGCAGGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCVEPAG*IHCRMS Trigger: GGACATCCTGCAATGGATTCAGCCTGCTGGTTCTAC...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATAATGGCCATCAGACCTaGTCCTATAATTCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNNGHQT*SYNSWE Trigger: TTCCCAGGAATTATAGGAGCAGGTCTGATGGCCATT...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATCTTCGCAGCAGGTCATaGTCACCCCTGGCTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYLRSRS*SPLAQK Trigger: TTTCTGAGCCAGGGGTGACCATGACCTGCTGCGAAG...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTTAGAGGTATCGCATTaGGAACTACTCCTAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNLEVSH*ELLLTA Trigger: TGCTGTTAGGAGTAGTTCTCAATGCGATACCTCTAA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATCTTCCTCAACTAAGCTaGCAATTAGAGGTATCGCAT | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNLPQLS*QLEVSH Trigger: ATGCGATACCTCTAATTGTCAGCTTAGTTGAGGAAG...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTCAAGGACATTGTTGTTaGTGGAATGGCCATCAGACC | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCQGHCC*WNGHQT Trigger: GGTCTGATGGCCATTCCAGCAACAACAATGTCCTTG...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTTCCAGTTCTGTTGTTaGAGCACGCTCTTTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNFQFCC*STLFFL Trigger: CAAGAAAAAGAGCGTGCTGCAACAACAGAACTGGAA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTGTCCTAGTGTTCCCTaGAAGCTGAGAATTAGATCT | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNCPSVP*KLRIRS Trigger: AGATCTAATTCTCAGCTTGCAGGGAACACTAGGACA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATTTGGAGAATTACACATaGGAGGACCTTTTAAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNLENYT*EDLLRE Trigger: CTCTCTTAAAAGGTCCTCTCATGTGTAATTCTCCAA...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATAAACCGATGACTATCTaGCTGAGCCCAAACAGGACC | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYKPMTI*LSPNRT Trigger: GGTCCTGTTTGGGCTCAGTCAGATAGTCATCGGTTT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGAGGCTGCAGTAAGCTaGGATAGCACCACTGTACTA | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYEAAVS*DSTTVL Trigger: TAGTACAGTGGTGCTATCTCAGCTTACTGCAGCCTC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGAAGTGGAAACTAGATaGTCTCCAGCCACTCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYEVETR*SPATRH Trigger: ATGGCGAGTGGCTGGAGAGCATCTAGTTTCCACTTC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGGTCATGGTCACCCCTaGCTCAGAAACGTTGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYGHGHP*LRNVVK Trigger: TTTGACAACGTTTCTGAGCCAGGGGTGACCATGACC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGGACATTGTTGTTGCTaGAATGGCCATCAGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYGHCCC*NGHQTC Trigger: GCAGGTCTGATGGCCATTCCAGCAACAACAATGTCC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTGTTCCCTGCAAGCTaGGAATTAGATCTAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCVFPAS*ELDLKT Trigger: AGTCTTTAGATCTAATTCTCAGCTTGCAGGGAACAC...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATCCTCCCAATTATCTCTaGCAAAGTTTACATGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNPPNYL*QSLHVF Trigger: AAACACATGTAAACTTTGTCAGAGATAATTGGGAGG...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGGCATTACTGTTGCTTaGAGAATTACACATGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCGITVA*RITHER Trigger: CCTCTCATGTGTAATTCTCCAAGCAACAGTAATGCC...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTATACAAAAATTAGCTTaGCATAGTGGCACGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCIQKLA*HSGTHL Trigger: CAGGTGCGTGCCACTATGCCAAGCTAATTTTTGTAT...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATTTTCCTGTTGAAAATTaGGCCATTCTGTGCCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYFPVEN*AILCPL Trigger: CAGCGGGCACAGAATGGCCCAATTTTCAACAGGAAA...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTTCCCAAATCAACCACTaGTATGAGAGTGTTATGCAT | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCSQINH*YESVMH Trigger: ATGCATAACACTCTCATATCAGTGGTTGATTTGGGA...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTCCTCATGTGATGAGTTaGAGTCAAAATGCAGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCPHVMS*SQNAVK Trigger: TTTGACTGCATTTTGACTGCAACTCATCACATGAGG...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATTGCTCCTATAATTCCTaGGAACCACCACTCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYCSYNS*EPPLKA Trigger: TGCTTTGAGTGGTGGTTCCCAGGAATTATAGGAGCA...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTTTAAGAGAGCCTGGATaGATATCAGCATGCAATACA | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCLREPG*ISACNT Trigger: TGTATTGCATGCTGATATCCATCCAGGCTCTCTTAA...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATACTGCAAATTATTTCTaGAACCTTAAGCCCAATGAA | + |
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Preference number: 4 (lower is better) Translates to: RNTIKRSCPLGAMAHACNTANYF*NLKPNE Trigger: TTCATTGGGCTTAAGGTTCCAGAAATAATTTGCAGT...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGCACGCTCTTTTTCTTaGTGTCAAGGACATTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYARSFS*CQGHCC Trigger: ACAACAATGTCCTTGACAGCAAGAAAAAGAGCGTGC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTACTCAAAGCAAGAGATaGGGTTTTGAGAAAATTGGT | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCTQSKR*GFEKIG Trigger: ACCAATTTTCTCAAAACCCCATCTCTTGCTTTGAGT...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTCAAGTTGAAGGATTCTaGATGAATGTCACTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: IPYLTSCDELQSKCSQNCQVEGF*MNVTDV Trigger: AACATCAGTGACATTCATCCAGAATCCTTCAACTTG...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATTCTTCAGAATCGAAGTaGAAACTAGATGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYSSESK*KLDALQ Trigger: CTGGAGAGCATCTAGTTTCCACTTCGATTCTGAAGA...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATAAAACCACTGCAAGTTaGAGGATTCTGGATGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYKTTAS*RILDEC Trigger: ACATTCATCCAGAATCCTTCAACTTGCAGTGGTTTT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATCTTTTATTTTCAGGATaGCTTCCGTTCCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYLLFSG*LPFLLI Trigger: GATGAGAAGGAACGGAAGTCATCCTGAAAATAAAAG...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR GCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGAAACCAGTAGGAGGTaGACAAGAGTCATTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYETSRR*TRVIEK Trigger: TTTTTCAATGACTCTTGTGCACCTCCTACTGGTTTC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR TCA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATTTGAAGGATTCTGGATaGATGTCACTGATGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYLKDSG*MSLMFF Trigger: GAAAAACATCAGTGACATTCATCCAGAATCCTTCAA...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CCA 90 bp | TCCATTGCAGGATGTCCATCCTTCGCAGCAGGTCATGGTCACCCCTaGCTCAGAAACGTTGTCAAAGTGGCTATGCTTGCATGGTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SIAGCPSFAAGHGHP*LRNVVKVAMLAWYY Trigger: ATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTGCTGCGAAGGATGGACATCCTGCAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS TCA 90 bp | CGCTTAGAGACTCCACACAGACAGCCAAGGAAACCGATGACTATCTaGCTGAGCCCAAACAGGACCTCCAGAATTCCAACAAGCAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLETPHRQPRKPMTI*LSPNRTSRIPTSNR Trigger: TCTATTGCTTGTTGGAATTCTGGAGGTCCTGTTTGGGCTCAGTCAGATAGTCATCGGTTTCCTTGGCTGTCTGTGTGGAGTCTCTAAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CCA 90 bp | TCGCAGCAGGTCATGGTCACCCCTGGCTCAGAAACGTTGTCAAAGTaGCTATGCTTGCATGGTACTATGTTGCCTTTTATCCCAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQQVMVTPGSETLSK*LCLHGTMLPFIPIF Trigger: GAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTGCTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS GCA 90 bp | CAGGTCATGGTCACCCCTGGCTCAGAAACGTTGTCAAAGTGGCTATaGTTGCATGGTACTATGTTGCCTTTTATCCCAATCTTCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QVMVTPGSETLSKWL*LHGTMLPFIPIFWL Trigger: TAACCAGAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS GCA 90 bp | GATAAGCCTATGTTTGTTTTCTTCAGAATCGAAGTGGAAACTAGATaGTCTCCAGCCACTCGCCATGGTGTCGTTACTGGTGGGTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: DKPMFVFFRIEVETR*SPATRHGVVTGGFI Trigger: AATAAACCCACCAGTAACGACACCATGGCGAGTGGCTGGAGAGCATCTAGTTTCCACTTCGATTCTGAAGAAAACAAACATAGGCTTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTAGCAGGCTGAATCCATaGCAGGATGTCCATCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: IPYLTSCDELQSKCSQNCSRLNP*QDVHPS Trigger: CGAAGGATGGACATCCTGCAATGGATTCAGCCTGCT...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATCTGTCAAGGACATTGTaGTTGCTGGAATGGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RNTIKRSCPLGAMAHACNLSRTL*LLEWPS Trigger: TGATGGCCATTCCAGCAACAACAATGTCCTTGACAG...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS TCA 90 bp | CTGACTGTGAGAATCAAGTGTCTGATTTCCAGAGTCTTTGCCATTTaGCCAAAACTGAGTAAGCTGCATGCTTTTGCTAGTGGGCATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTVRIKCLISRVFAI*PKLSKLHAFASGHN Trigger: GTTATGCCCACTAGCAAAAGCATGCAGCTTACTCAGTTTTGGTCAAATGGCAAAGACTCTGGAAATCAGACACTTGATTCTCACAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS-3UTR CAA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTTCAAGGACATTGTTGTaGCTGGAATGGCCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IPYLTSCDELQSKCSQNCSRTLL*LEWPSD Trigger: GTCTGATGGCCATTCCAGCAACAACAATGTCCTTGA...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATATTCCAGTTCTGTTGTaGCAGCACGCTCTTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNTIKRSCPLGAMAHACNIPVLL*QHALFL Trigger: AAGAAAAAGAGCGTGCTGCAACAACAGAACTGGAAT...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTAGCACGCTCTTTTTCTaGCTGTCAAGGACATTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPYLTSCDELQSKCSQNCSTLFF*LSRTLL Trigger: CAACAATGTCCTTGACAGCAAGAAAAAGAGCGTGCT...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | AGAAATACAATAAAAAGGTCCTGTCCTTTAGGCGCGATGGCTCATGCCTGTAATCAATTGGCATTACTGTaGCTTGGAGAATTACACATG | + |
|
Preference number: 5 (lower is better) Translates to: RNTIKRSCPLGAMAHACNQLALL*LGELHM Trigger: CATGTGTAATTCTCCAAGCAACAGTAATGCCAATTG...ATTACAGGCATGAGCCATCGCGCCTAAAGGACAGGACCTTTTTATTGTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATTTGCTGTCAAGGACATaGTTGTTGCTGGAATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYLLSRT*LLLEWP Trigger: TGGCCATTCCAGCAACAACAATGTCCTTGACAGCAA...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
||
| CDS TCA 90 bp | ATGAAAATTCACAATTGGCATTACTGTTGCTTGGAGAATTACACATaGGAGGACCTTTTAAGAGAGCCTGGATGGATATCAGCATGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: MKIHNWHYCCLENYT*EDLLREPGWISACN Trigger: ATTGCATGCTGATATCCATCCAGGCTCTCTTAAAAGGTCCTCTCATGTGTAATTCTCCAAGCAACAGTAATGCCAATTGTGAATTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATTTACTGGTGGGTTTATaGAAACCAGTAGGAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYLLVGL*KPVGGA Trigger: TGCACCTCCTACTGGTTTCAATAAACCCACCAGTAA...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGGAGGGTATAATGAATaGCCATGTACCTGTCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYGGYNE*PCTCHL Trigger: TAGGTGACAGGTACATGGCAATTCATTATACCCTCC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATATTAGAGGTATCGCATaGAGAACTACTCCTAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYIRGIA*RTTPNS Trigger: GCTGTTAGGAGTAGTTCTCAATGCGATACCTCTAAT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATAACATTCCAGTTCTGTaGTTGCAGCACGCTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYNIPVL*LQHALF Trigger: AAAAAGAGCGTGCTGCAACAACAGAACTGGAATGTT...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | ATTCCATACCTGACCTCATGTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTTGGATAAGCCTATGTTaGTTTTCTTCAGAATCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IPYLTSCDELQSKCSQNCWISLC*FSSESK Trigger: CTTCGATTCTGAAGAAAACAAACATAGGCTTATCCA...ACAATTTTGACTGCATTTTGACTGCAACTCATCACATGAGGTCAGGTATGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CCA 90 bp | ACCTCCAGAATTCCAACAAGCAATAGACCTAAAAATACTGAGAAGTaGATAAGCCTATGTTTGTTTTCTTCAGAATCGAAGTGGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: TSRIPTSNRPKNTEK*ISLCLFSSESKWKL Trigger: TAGTTTCCACTTCGATTCTGAAGAAAACAAACATAGGCTTATCCACTTCTCAGTATTTTTAGGTCTATTGCTTGTTGGAATTCTGGAGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS-3UTR CAA 90 bp | GTGATGAGTTGCAGTCAAAATGCAGTCAAAATTGTGTTTCATGCACAAAGTTATGTAAACATCTCCCCGTaGCTTTTGGTTGAAGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: VMSCSQNAVKIVFHAQSYVNISP*LLVEVI Trigger: AATTACTTCAACCAAAAGCAACGGGGAGATGTTTAC...ATAACTTTGTGCATGAAACACAATTTTGACTGCATTTTGACTGCAACTCATCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CCA 72 bp | ATCCATTGCAGGATGTCCATCCTTCGCAGCAGGTCATaGTCACCCCTGGCTCAGAAACGTTGTCAAAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: IHCRMSILRSRS*SPLAQKRCQSG Trigger: GCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTGCTGCGAAGGATGGACATCCTGCAATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000304568.4 ENST00000449706.1 |
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| CDS CCA 72 bp | GGATGTCCATCCTTCGCAGCAGGTCATGGTCACCCCTaGCTCAGAAACGTTGTCAAAGTGGCTATGCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCPSFAAGHGHP*LRNVVKVAMLA Trigger: TGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTGCTGCGAAGGATGGACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CAA 90 bp | TTGAGAACTACTCCTAACAGCAGTAGAACCAGCAGGCTGAATCCATaGCAGGATGTCCATCCTTCGCAGCAGGTCATGGTCACCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRTTPNSSRTSRLNP*QDVHPSQQVMVTPG Trigger: GCCAGGGGTGACCATGACCTGCTGCGAAGGATGGACATCCTGCAATGGATTCAGCCTGCTGGTTCTACTGCTGTTAGGAGTAGTTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 72 bp | ACTCCTAACAGCAGTAGAACCAGCAGGCTGAATCCATaGCAGGATGTCCATCCTTCGCAGCAGGTCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TPNSSRTSRLNP*QDVHPSQQVMV Trigger: GACCATGACCTGCTGCGAAGGATGGACATCCTGCAATGGATTCAGCCTGCTGGTTCTACTGCTGTTAGGAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 72 bp | TCGCAGCAGGTCATGGTCACCCCTGGCTCAGAAACGTaGTCAAAGTGGCTATGCTTGCATGGTACTATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQQVMVTPGSET*SKWLCLHGTML Trigger: CAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTGCTGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CAA 90 bp | GATGCTCTCCAGCCACTCGCCATGGTGTCGTTACTGGTGGGTTTATaGAAACCAGTAGGAGGTGCACAAGAGTCATTGAAAAACCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: DALQPLAMVSLLVGL*KPVGGAQESLKNHC Trigger: GCAGTGGTTTTTCAATGACTCTTGTGCACCTCCTACTGGTTTCAATAAACCCACCAGTAACGACACCATGGCGAGTGGCTGGAGAGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 90 bp | GTCCATCCTTCGCAGCAGGTCATGGTCACCCCTGGCTCAGAAACGTaGTCAAAGTGGCTATGCTTGCATGGTACTATGTTGCCTTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: VHPSQQVMVTPGSET*SKWLCLHGTMLPFI Trigger: GATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGACCTGCTGCGAAGGATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS TCA 72 bp | ACTCCACACAGACAGCCAAGGAAACCGATGACTATCTaGCTGAGCCCAAACAGGACCTCCAGAATTCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: TPHRQPRKPMTI*LSPNRTSRIPT Trigger: TGTTGGAATTCTGGAGGTCCTGTTTGGGCTCAGTCAGATAGTCATCGGTTTCCTTGGCTGTCTGTGTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 72 bp | CAGCCACTCGCCATGGTGTCGTTACTGGTGGGTTTATaGAAACCAGTAGGAGGTGCACAAGAGTCATTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QPLAMVSLLVGL*KPVGGAQESLK Trigger: TTTCAATGACTCTTGTGCACCTCCTACTGGTTTCAATAAACCCACCAGTAACGACACCATGGCGAGTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS GCA 72 bp | GTCACCCCTGGCTCAGAAACGTTGTCAAAGTGGCTATaGTTGCATGGTACTATGTTGCCTTTTATCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: VTPGSETLSKWL*LHGTMLPFIPI Trigger: GATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CCA 72 bp | GTCATGGTCACCCCTGGCTCAGAAACGTTGTCAAAGTaGCTATGCTTGCATGGTACTATGTTGCCTTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: VMVTPGSETLSK*LCLHGTMLPFI Trigger: GATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS GCA 72 bp | CATTCCAGTTCTGTTGTTGCAGCACGCTCTTTTTCTTaGTGTCAAGGACATTGTTGTTGCTGGAATGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HSSSVVAARSFS*CQGHCCCWNGH Trigger: ATGGCCATTCCAGCAACAACAATGTCCTTGACAGCAAGAAAAAGAGCGTGCTGCAACAACAGAACTGGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS GCA 72 bp | ATGTTTGTTTTCTTCAGAATCGAAGTGGAAACTAGATaGTCTCCAGCCACTCGCCATGGTGTCGTTACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MFVFFRIEVETR*SPATRHGVVTG Trigger: ACCAGTAACGACACCATGGCGAGTGGCTGGAGAGCATCTAGTTTCCACTTCGATTCTGAAGAAAACAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS GCA 72 bp | CCCCTGGCTCAGAAACGTTGTCAAAGTGGCTATGCTTaGATGGTACTATGTTGCCTTTTATCCCAATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLAQKRCQSGYA*MVLCCLLSQSS Trigger: AGAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CCA 72 bp | TGGATAAGCCTATGTTTGTTTTCTTCAGAATCGAAGTaGAAACTAGATGCTCTCCAGCCACTCGCCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WISLCLFSSESK*KLDALQPLAMV Trigger: CACCATGGCGAGTGGCTGGAGAGCATCTAGTTTCCACTTCGATTCTGAAGAAAACAAACATAGGCTTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 72 bp | ACATTCCAGTTCTGTTGTTGCAGCACGCTCTTTTTCTaGCTGTCAAGGACATTGTTGTTGCTGGAATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TFQFCCCSTLFF*LSRTLLLLEWP Trigger: TGGCCATTCCAGCAACAACAATGTCCTTGACAGCAAGAAAAAGAGCGTGCTGCAACAACAGAACTGGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 72 bp | ACCCCTGGCTCAGAAACGTTGTCAAAGTGGCTATGCTaGCATGGTACTATGTTGCCTTTTATCCCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TPGSETLSKWLC*HGTMLPFIPIF Trigger: GAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CAA 90 bp | ATGAAAGAAACATTCCAGTTCTGTTGTTGCAGCACGCTCTTTTTCTaGCTGTCAAGGACATTGTTGTTGCTGGAATGGCCATCAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: MKETFQFCCCSTLFF*LSRTLLLLEWPSDL Trigger: CAGGTCTGATGGCCATTCCAGCAACAACAATGTCCTTGACAGCAAGAAAAAGAGCGTGCTGCAACAACAGAACTGGAATGTTTCTTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 90 bp | GTCATGGTCACCCCTGGCTCAGAAACGTTGTCAAAGTGGCTATGCTaGCATGGTACTATGTTGCCTTTTATCCCAATCTTCTGGTTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VMVTPGSETLSKWLC*HGTMLPFIPIFWLK Trigger: TTTTAACCAGAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCAGGGGTGACCATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CAA 72 bp | TCTTCCTCAACTAAGCTGACAATTAGAGGTATCGCATaGAGAACTACTCCTAACAGCAGTAGAACCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSTKLTIRGIA*RTTPNSSRTSR Trigger: CCTGCTGGTTCTACTGCTGTTAGGAGTAGTTCTCAATGCGATACCTCTAATTGTCAGCTTAGTTGAGGAAGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304568.4 |
||
| CDS CAA 90 bp | GAAAATTGGTCTTCCTCAACTAAGCTGACAATTAGAGGTATCGCATaGAGAACTACTCCTAACAGCAGTAGAACCAGCAGGCTGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: ENWSSSTKLTIRGIA*RTTPNSSRTSRLNP Trigger: TGGATTCAGCCTGCTGGTTCTACTGCTGTTAGGAGTAGTTCTCAATGCGATACCTCTAATTGTCAGCTTAGTTGAGGAAGACCAATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CCA 72 bp | TGGCTCAGAAACGTTGTCAAAGTGGCTATGCTTGCATaGTACTATGTTGCCTTTTATCCCAATCTTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: WLRNVVKVAMLA*YYVAFYPNLLV Trigger: AACCAGAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGTTTCTGAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CAA 90 bp | ACAAGCAATAGACCTAAAAATACTGAGAAGTGGATAAGCCTATGTTaGTTTTCTTCAGAATCGAAGTGGAAACTAGATGCTCTCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TSNRPKNTEKWISLC*FSSESKWKLDALQP Trigger: TGGCTGGAGAGCATCTAGTTTCCACTTCGATTCTGAAGAAAACAAACATAGGCTTATCCACTTCTCAGTATTTTTAGGTCTATTGCTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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| CDS CAA 72 bp | ACGTTGTCAAAGTGGCTATGCTTGCATGGTACTATGTaGCCTTTTATCCCAATCTTCTGGTTAAAATTTAAC | + |
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Preference number: 6 (lower is better) Translates to: TLSKWLCLHGTM*PFIPIFWLKFN Trigger: GTTAAATTTTAACCAGAAGATTGGGATAAAAGGCAACATAGTACCATGCAAGCATAGCCACTTTGACAACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449706.1 |
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| CDS CAA 72 bp | AGACCTAAAAATACTGAGAAGTGGATAAGCCTATGTTaGTTTTCTTCAGAATCGAAGTGGAAACTAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: RPKNTEKWISLC*FSSESKWKLDA Trigger: AGCATCTAGTTTCCACTTCGATTCTGAAGAAAACAAACATAGGCTTATCCACTTCTCAGTATTTTTAGGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304568.4 |
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