RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TM2D2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169490

Ensembl transcript IDs: ENST00000397070.6, ENST00000456397.7, ENST00000456845.6, ENST00000517872.1, ENST00000519186.1, ENST00000520152.1, ENST00000521060.1, ENST00000522142.1, ENST00000522434.5, ENST00000524331.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATATTCATTTTGCTCAACTTGTTAGGTCCACTTGCTCCAAAGGACTaGAGATATAGCAATGTACAGAAAGGAAGACTATGGAAACCCATC +
Preference number: 1 (lower is better)
Translates to: IFILLNLLGPLAPKD*RYSNVQKGRLWKPI
Trigger: GATGGGTTTCCATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGACCTAACAAGTTGAGCAAAATGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR TCA 90 bp AGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTaGAGATTTTCATTGTTCAGCTTCAGATCTCCTTGCATGAAGACT +
Preference number: 1 (lower is better)
Translates to: RISVCITIHGHFYFC*RFSLFSFRSPCMKT
Trigger: AGTCTTCATGCAAGGAGATCTGAAGCTGAACAATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR TCA 90 bp AACTTGTATGAAATCTTAATTTTATTAGCATGGGCTGGTAAACGCTaGTTTTTAGATTGGACAATTCTGCCAGGAGGAATAGCTCAACTC +
Preference number: 1 (lower is better)
Translates to: NLYEILILLAWAGKR*FLDWTILPGGIAQL
Trigger: GAGTTGAGCTATTCCTCCTGGCAGAATTGTCCAATCTAAAAATCAGCGTTTACCAGCCCATGCTAATAAAATTAAGATTTCATACAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTTCTCTTTCTGACTGCTaGAGCCCACAGGGAGAGCTA +
Preference number: 2 (lower is better)
Translates to: KVQGLQACTIALALKFLISLSDC*SPQGEL
Trigger: TAGCTCTCCCTGTGGGCTGCAGCAGTCAGAAAGAGA...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGACTTAAAGGATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRLKGFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATCCTTTAAG...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGAAGGATCTCGGCTCACTaGAATCTCTGCCTCCTCAGT +
Preference number: 2 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRRISAH*NLCLLS
Trigger: ACTGAGGAGGCAGAGATTGCAGTGAGCCGAGATCCT...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTCTCGGCCTCCCAAAGTaGAGGGATTACAGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGLGLPK*RDYRLA
Trigger: TGCAAGCCTGTAATCCCTGCACTTTGGGAGGCCGAG...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAAGCTTGTCATTCCGTCTaGAAGGTAAAATCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKACHSV*KVKSGL
Trigger: CAACCCAGATTTTACCTTGCAGACGGAATGACAAGC...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTCTCTTTCTGACTGCTaGAGCCCACAGGGAGAGCTA +
Preference number: 2 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGSLSDC*SPQGEL
Trigger: TAGCTCTCCCTGTGGGCTGCAGCAGTCAGAAAGAGA...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAACCTCTTCCATTGACTTaGCCACATTGCCCACCTTTG +
Preference number: 2 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKPLPLT*PHCPPL
Trigger: CAAAGGTGGGCAATGTGGCCAAGTCAATGGAAGAGG...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCCCCCACAACACTTTTTaGTTGTCATTCCGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFPHNTF*LSFRLQ
Trigger: TTGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGG...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CCA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGACAGAAAGGAAGACTATaGAAACCCATCCACAGCTTG +
Preference number: 2 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRQKGRL*KPIHSL
Trigger: CAAGCTGTGGATGGGTTTCCATAGTCTTCCTTTCTG...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAAATCAAAGAGGAGTTTTaGGCCTGTAGAGATGAATTC +
Preference number: 2 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKIKEEF*ACRDEF
Trigger: GAATTCATCTCTACAGGCTCAAAACTCCTCTTTGAT...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGACTTGCTCCAAAGGACTaGAGATATAGCAATGTACAG +
Preference number: 2 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRLAPKD*RYSNVQ
Trigger: CTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAG...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCCCCCACAACACTTTTTaGTTGTCATTCCGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: TVRRASSVVSSLLALQPSPHNTF*LSFRLQ
Trigger: TTGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGG...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCCTTGTTAGGTCCACTTaGTCCAAAGGACTGAAGATA +
Preference number: 2 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFLVRST*SKGLKI
Trigger: TATCTTCAGTCCTTTGGAGCAAGTGGACCTAACAAG...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTAGCTTCAGATCTCCTTaGATGAAGACTCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGSFRSP*MKTQGH
Trigger: GTGACCCTGAGTCTTCATGCAAGGAGATCTGAAGCT...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCGCTCACTGCAATCTCTaGCTCCTCAGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: TDDSQITTLAARTTSFVSAHCNL*LLSSSD
Trigger: ATCACTTGAACTGAGGAGGCAGAGATTGCAGTGAGC...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTAGGTTAAGGTCAGTGTaGTACAGAACTTTCAAGACA +
Preference number: 2 (lower is better)
Translates to: KVQGLQACTIALALKFLIRLRSV*YRTFKT
Trigger: TGTCTTGAAAGTTCTGTACCACACTGACCTTAACCT...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGTCAGATCTCCTTGCATaGAGACTCAGGGTCACAAGA +
Preference number: 2 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKSDLLA*RLRVTR
Trigger: TCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGA...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGATGGGCTGGTAAACGCTaGTTTTTAGATTGGACAATT +
Preference number: 2 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRWAGKR*FLDWTI
Trigger: AATTGTCCAATCTAAAAATCAGCGTTTACCAGCCCA...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTGCTTGTCATTCCGTCTaGAAGGTAAAATCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGACHSV*KVKSGL
Trigger: CAACCCAGATTTTACCTTGCAGACGGAATGACAAGC...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATCCCCACAACACTTTTTaGTTGTCATTCCGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYPHNTF*LSFRLQ
Trigger: TTGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGG...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAATTGCACTGCATATACTaGCTCTGGAACATAATGGAG +
Preference number: 2 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKLHCIY*LWNIME
Trigger: CTCCATTATGTTCCAGAGGCAGTATATGCAGTGCAA...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTTGCATATACTGCCTCTaGAACATAATGGAGACAAAA +
Preference number: 2 (lower is better)
Translates to: KVQGLQACTIALALKFLICIYCL*NIMETK
Trigger: TTTTGTCTCCATTATGTTCCAGAGGCAGTATATGCA...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGAGGAAAGGAACAAATTTaGTTCCCCACAACACTTTTT +
Preference number: 2 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRGKEQI*FPTTLF
Trigger: AAAAAGTGTTGTGGGGAATCAAATTTGTTCCTTTCC...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTCTTGCTCCAAAGGACTaGAGATATAGCAATGTACAG +
Preference number: 2 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCLAPKD*RYSNVQ
Trigger: CTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAG...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCTTGCACTGCATATACTaGCTCTGGAACATAATGGAG +
Preference number: 2 (lower is better)
Translates to: TDDSQITTLAARTTSFVSLHCIY*LWNIME
Trigger: CTCCATTATGTTCCAGAGGCAGTATATGCAGTGCAA...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCATCAAAGAGGAGTTTTaGGCCTGTAGAGATGAATTC +
Preference number: 2 (lower is better)
Translates to: TDDSQITTLAARTTSFVSIKEEF*ACRDEF
Trigger: GAATTCATCTCTACAGGCTCAAAACTCCTCTTTGAT...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACGCAAACGATGAGAACTaGGTTTTTAAAACCACTTAC +
Preference number: 2 (lower is better)
Translates to: RRASSVVSSLLALQPSSYANDEN*VFKTTY
Trigger: GTAAGTGGTTTTAAAAACTCAGTTCTCATCGTTTGC...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR GCA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTTGACTTGGCCACATTaGCCACCTTTGATTTTATAT +
Preference number: 2 (lower is better)
Translates to: TVRRASSVVSSLLALQPSLTWPH*PPLILY
Trigger: ATATAAAATCAAAGGTGGGCAATGTGGCCAAGTCAA...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCAGGTTAAGGTCAGTGTaGTACAGAACTTTCAAGACA +
Preference number: 2 (lower is better)
Translates to: TDDSQITTLAARTTSFVSRLRSV*YRTFKT
Trigger: TGTCTTGAAAGTTCTGTACCACACTGACCTTAACCT...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTGTTTATTCCCCCTACTaGAAATACTCATACAGTACT +
Preference number: 2 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGVYSPY*KYSYST
Trigger: AGTACTGTATGAGTATTTTCAGTAGGGGGAATAAAC...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCTACATATGGCATCCTTaGACTCCCTTAAACTCTTTT +
Preference number: 2 (lower is better)
Translates to: TDDSQITTLAARTTSFVSYIWHP*TPLNSF
Trigger: AAAAGAGTTTAAGGGAGTTCAAGGATGCCATATGTA...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCCAGGACTTGGTTAGGTaGAAAGTAGCATCTTATTTT +
Preference number: 2 (lower is better)
Translates to: TDDSQITTLAARTTSFVSQDLVR*KVASYF
Trigger: AAAATAAGATGCTACTTTTCACCTAACCAAGTCCTG...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTCAGGACTTGGTTAGGTaGAAAGTAGCATCTTATTTT +
Preference number: 2 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGQDLVR*KVASYF
Trigger: AAAATAAGATGCTACTTTTCACCTAACCAAGTCCTG...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACAATGACTTCAAGCCTTaGAGCTGCAAAATTTCTTTT +
Preference number: 2 (lower is better)
Translates to: RRASSVVSSLLALQPSSYNDFKP*SCKISF
Trigger: AAAAGAAATTTTGCAGCTCCAAGGCTTGAAGTCATT...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGGGAAAGGAACAAATTTaGTTCCCCACAACACTTTTT +
Preference number: 2 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKGKEQI*FPTTLF
Trigger: AAAAAGTGTTGTGGGGAATCAAATTTGTTCCTTTCC...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATCTTGCTCCAAAGGACTaGAGATATAGCAATGTACAG +
Preference number: 2 (lower is better)
Translates to: FQCVLQSTAISISAEDFHLAPKD*RYSNVQ
Trigger: CTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAG...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR TCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATATCAAAGAGGAGTTTTaGGCCTGTAGAGATGAATTC +
Preference number: 2 (lower is better)
Translates to: FQCVLQSTAISISAEDFHIKEEF*ACRDEF
Trigger: GAATTCATCTCTACAGGCTCAAAACTCCTCTTTGAT...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCCACAACACTTTTTGCTaGTCATTCCGTCTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: TVRRASSVVSSLLALQPSHNTFC*SFRLQG
Trigger: ACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCTTCATTTTGCTCAACTaGTTAGGTCCACTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFFILLN*LGPLAP
Trigger: TGGAGCAAGTGGACCTAACAAGTTGAGCAAAATGAA...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR TCA 72 bp GAAGATTTTCATTGTTCAGCTTCAGATCTCCTTGCATaGAGACTCAGGGTCACAAGAGGAACATGGATCCAA +
Preference number: 3 (lower is better)
Translates to: EDFHCSASDLLA*RLRVTRGTWIQ
Trigger: TTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAGCTGAACAATGAAAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTCACAACACTTTTTGCTaGTCATTCCGTCTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGHNTFC*SFRLQG
Trigger: ACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGTCCCCACAACACTTTTaGCTTGTCATTCCGTCTGCA +
Preference number: 3 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKSPQHF*LVIPSA
Trigger: TGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGGA...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAAATTGACTTGGCCACATaGCCCACCTTTGATTTTATA +
Preference number: 3 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKIDLAT*PTFDFI
Trigger: TATAAAATCAAAGGTGGGCAATGTGGCCAAGTCAAT...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR TCA 72 bp GTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTaGAGATTTTCATTGTTCAGCTTCAGATCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: VCITIHGHFYFC*RFSLFSFRSPC
Trigger: GCAAGGAGATCTGAAGCTGAACAATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATCACAACACTTTTTGCTaGTCATTCCGTCTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: FQCVLQSTAISISAEDFHHNTFC*SFRLQG
Trigger: ACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR-3UTR CAA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAACTATCCTTTATGTTTaGTGCATGAGGAAAGGAACA +
Preference number: 3 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLTILYV*CMRKGT
Trigger: TGTTCCTTTCCTCATGCACAAAACATAAAGGATAGT...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
3UTR TCA 72 bp GAAATCTTAATTTTATTAGCATGGGCTGGTAAACGCTaGTTTTTAGATTGGACAATTCTGCCAGGAGGAATA +
Preference number: 3 (lower is better)
Translates to: EILILLAWAGKR*FLDWTILPGGI
Trigger: TATTCCTCCTGGCAGAATTGTCCAATCTAAAAATCAGCGTTTACCAGCCCATGCTAATAAAATTAAGATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGCAGTGCACCAGTTGCTaGCATCACTTGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMQCTSC*HHLASA
Trigger: GGCTGATGCCAAGTGATGGCAGCAACTGGTGCACTG...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGAGGATCTCGGCTCACTaGAATCTCTGCCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMRISAH*NLCLLS
Trigger: ACTGAGGAGGCAGAGATTGCAGTGAGCCGAGATCCT...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCGGCGCCAGCGGATGTaGGCTCAGGCTCAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYRRQRM*AQAQRS
Trigger: CGACCGCTGAGCCTGAGCTCACATCCGCTGGCGCCG...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456397.7
CDS-3UTR TCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGCGGCGCCAGCGGATGTaGGCTCAGGCTCAGCGGTCG +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKRRQRM*AQAQRS
Trigger: CGACCGCTGAGCCTGAGCTCACATCCGCTGGCGCCG...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR GCA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGTTCCTGGGATGCAGTTaGATTTCCAACATGATCCAC +
Preference number: 4 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMFLGCS*ISNMIH
Trigger: GTGGATCATGTTGGAAATGCAACTGCATCCCAGGAA...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTCTGGTGACCGGGGAATaGAGAGGTGTGGCTGTTATC +
Preference number: 4 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPLVTGE*RGVAVI
Trigger: GATAACAGCCACACCTCTGCATTCCCCGGTCACCAG...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGAGGTTGTATCACATTTaGCCAGGTTTGTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMRLYHI*PGLWAD
Trigger: ATCTGCCCACAAACCTGGCCAAATGTGATACAACCT...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGTCATCATACGGTCTTTaGAAATCGCTGTTTGCATGC +
Preference number: 4 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMSSYGL*KSLFAC
Trigger: GCATGCAAACAGCGATTTGCAAAGACCGTATGATGA...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR GCA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTTCTCTTTCTGACTGCTaGAGCCCACAGGGAGAGCTA +
Preference number: 4 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPSLSDC*SPQGEL
Trigger: TAGCTCTCCCTGTGGGCTGCAGCAGTCAGAAAGAGA...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATGGTAAGAGCAGAGGATaGCCGGAGAGTGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYGKSRG*PESGGR
Trigger: GCGACCCCCACTCTCCGGTCATCCTCTGCTCTTACC...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR TCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTGGTAAGAGCAGAGGATaGCCGGAGAGTGGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEIGKSRG*PESGGR
Trigger: GCGACCCCCACTCTCCGGTCATCCTCTGCTCTTACC...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR TCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAAGGCATGGCACTGGACTaGAGTGTGTTCCACGTCGCT +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKGMALD*SVFHVA
Trigger: AGCGACGTGGAACACACTTCAGTCCAGTGCCATGCC...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCCTCGGCCTCCCAAAGTaGAGGGATTACAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFLGLPK*RDYRLA
Trigger: TGCAAGCCTGTAATCCCTGCACTTTGGGAGGCCGAG...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTCTTCATCAAGTTTTCTaGGGTTCGGTTTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPLHQVF*GSVSPC
Trigger: GCAGGGTGAAACCGAACCCCAGAAAACTTGATGAAG...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CCA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGAGACTGGGCGGGGGTaGGGGAGTGTGTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLETGRG*GSVSHH
Trigger: ATGGTGAGACACACTCCCCCACCCCCGCCCAGTCTC...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGGGCATGGCACTGGACTaGAGTGTGTTCCACGTCGCT +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRGMALD*SVFHVA
Trigger: AGCGACGTGGAACACACTTCAGTCCAGTGCCATGCC...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAATCAGCGGTCGCATTTTaGGAGTGGCTCCGAGACACA +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKSAVAF*EWLRDT
Trigger: TGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGA...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456397.7
CDS-3UTR GCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCAGTGCACCAGTTGCTaGCATCACTTGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYQCTSC*HHLASA
Trigger: GGCTGATGCCAAGTGATGGCAGCAACTGGTGCACTG...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCTCGGCCTCCCAAAGTaGAGGGATTACAGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYLGLPK*RDYRLA
Trigger: TGCAAGCCTGTAATCCCTGCACTTTGGGAGGCCGAG...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCCTTAAAGGATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFLKGFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATCCTTTAAG...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGAGGATGACCGGAGAGTaGGGGTCGCCATATTCCCAG +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRRMTGE*GSPYSQ
Trigger: CTGGGAATATGGCGACCCCCACTCTCCGGTCATCCT...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR CCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAATCTAAGGCATGGCACTaGACTGAAGTGTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKSKAWH*TEVCST
Trigger: CGTGGAACACACTTCAGTCCAGTGCCATGCCTTAGA...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTATTCCATCTAAGGCATaGCACTGGACTGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPIPSKA*HWTEVC
Trigger: ACACACTTCAGTCCAGTGCCATGCCTTAGATGGAAT...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACTCGGTTTCACCCTGCTaGCCCCTTTCCAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYSVSPC*PLSKPI
Trigger: AATTGGCTTGGAAAGGGGTCAGCAGGGTGAAACCGA...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456845.6
CDS-3UTR TCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCAGGCATGGCACTGGACTaGAGTGTGTTCCACGTCGCT +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPGMALD*SVFHVA
Trigger: AGCGACGTGGAACACACTTCAGTCCAGTGCCATGCC...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTCTTGCTCCAAAGGACTaGAGATATAGCAATGTACAG +
Preference number: 4 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPLAPKD*RYSNVQ
Trigger: CTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAG...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAACTCAACTCACACATCTaGTGCCGCTGGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKLNSHI*CRWLSK
Trigger: TTTTGAAAGCCAGCGGCATCAGATGTGTGAGTTGAG...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTCAGCGGTCGCATTTTaGGAGTGGCTCCGAGACACA +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCSAVAF*EWLRDT
Trigger: TGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGA...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR GCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAACAACAGCTTCCCTACTaGAGTGCCAGTGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKQQLPY*SASVSQ
Trigger: TTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTG...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAAAAACAGTGCACCAGTTaGTGCCATCACTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKKQCTS*CHHLAS
Trigger: TGATGCCAAGTGATGGCAGCAACTGGTGCACTGTTT...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAAAGCTTCAGATCTCCTTaGATGAAGACTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKSFRSP*MKTQGH
Trigger: GTGACCCTGAGTCTTCATGCAAGGAGATCTGAAGCT...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCTTAAAGGATTCACCTaGCTCGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYLKGFT*LGLPKC
Trigger: GCACTTTGGGAGGCCGAGGCAGGTGAATCCTTTAAG...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCGTCGCATTTTGCGAGTaGCTCCGAGACACACAATGC +
Preference number: 4 (lower is better)
Translates to: TVRRASSVVSSLLALQPSVAFCE*LRDTQC
Trigger: GCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGAC...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456397.7
CDS-3UTR CCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGAGGATGACCGGAGAGTaGGGGTCGCCATATTCCCAG +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKRMTGE*GSPYSQ
Trigger: CTGGGAATATGGCGACCCCCACTCTCCGGTCATCCT...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR CCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATGAGACTGGGCGGGGGTaGGGGAGTGTGTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHETGRG*GSVSHH
Trigger: ATGGTGAGACACACTCCCCCACCCCCGCCCAGTCTC...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTTTGTGGGCAGATGGATaGTGGGTGTCATTTACAAGT +
Preference number: 4 (lower is better)
Translates to: KVQGLQACTIALALKFLILWADG*WVSFTS
Trigger: ACTTGTAAATGACACCCATCATCCATCTGCCCACAA...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAATTCCTGGGATGCAGTTaGATTTCCAACATGATCCAC +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKFLGCS*ISNMIH
Trigger: GTGGATCATGTTGGAAATGCAACTGCATCCCAGGAA...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTCAACAGCTTCCCTACTaGAGTGCCAGTGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCQQLPY*SASVSQ
Trigger: TTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTG...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGCAGTGCACCAGTTGCTaGCATCACTTGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKQCTSC*HHLASA
Trigger: GGCTGATGCCAAGTGATGGCAGCAACTGGTGCACTG...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCACTGGTGACCGGGGAATaGAGAGGTGTGGCTGTTATC +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPLVTGE*RGVAVI
Trigger: GATAACAGCCACACCTCTGCATTCCCCGGTCACCAG...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTAGGATCTCGGCTCACTaGAATCTCTGCCTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGRISAH*NLCLLS
Trigger: ACTGAGGAGGCAGAGATTGCAGTGAGCCGAGATCCT...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGGTCGCATTTTGCGAGTaGCTCCGAGACACACAATGC +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRVAFCE*LRDTQC
Trigger: GCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGAC...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR CCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTAGGTTGTATCACATTTaGCCAGGTTTGTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KVQGLQACTIALALKFLIRLYHI*PGLWAD
Trigger: ATCTGCCCACAAACCTGGCCAAATGTGATACAACCT...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTTCGGTTTCACCCTGCTaGCCCCTTTCCAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEISVSPC*PLSKPI
Trigger: AATTGGCTTGGAAAGGGGTCAGCAGGGTGAAACCGA...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR TCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAACTTGCTCCAAAGGACTaGAGATATAGCAATGTACAG +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKLAPKD*RYSNVQ
Trigger: CTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAG...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAATCAGATCTCCTTGCATaGAGACTCAGGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKSDLLA*RLRVTR
Trigger: TCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGA...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAACTCAACTCACACATCTaGTGCCGCTGGCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKLNSHI*CRWLSK
Trigger: TTTTGAAAGCCAGCGGCATCAGATGTGTGAGTTGAG...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCATCCTTTTATTCCTGGTaGCCGGGGAATGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPSFYSW*PGNAEV
Trigger: CACCTCTGCATTCCCCGGTCACCAGGAATAAAAGGA...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTTCCTTTTATTCCTGGTaGCCGGGGAATGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEISFYSW*PGNAEV
Trigger: CACCTCTGCATTCCCCGGTCACCAGGAATAAAAGGA...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTACAACAGCTTCCCTACTaGAGTGCCAGTGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLQQLPY*SASVSQ
Trigger: TTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTG...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTCGCCCGGCTAATTTTTaGATTTTTACTAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: KVQGLQACTIALALKFLIRPANF*IFTRDW
Trigger: CCAGTCTCTAGTAAAAATGCAAAAATTAGCCGGGCG...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAAGCTCACTGCAATCTCTaGCTCCTCAGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKAHCNL*LLSSSD
Trigger: ATCACTTGAACTGAGGAGGCAGAGATTGCAGTGAGC...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAAGAAGGGAGGTGTTTCTaGTCCTGTTTCTATAAGGAT +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKEGRCF*SCFYKD
Trigger: ATCCTTATAGAAACAGGACCAGAAACACCTCCCTTC...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTCTAAGGCATGGCACTaGACTGAAGTGTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGSKAWH*TEVCST
Trigger: CGTGGAACACACTTCAGTCCAGTGCCATGCCTTAGA...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGTCTAAGGCATGGCACTaGACTGAAGTGTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRSKAWH*TEVCST
Trigger: CGTGGAACACACTTCAGTCCAGTGCCATGCCTTAGA...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTTGCATATACTGCCTCTaGAACATAATGGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPCIYCL*NIMETK
Trigger: TTTTGTCTCCATTATGTTCCAGAGGCAGTATATGCA...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTCCTCTTCCATTGACTTaGCCACATTGCCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCPLPLT*PHCPPL
Trigger: CAAAGGTGGGCAATGTGGCCAAGTCAATGGAAGAGG...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATCCAAGCCAATTAAACTaGAGCACAGCAGGTCAAACG +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYPSQLN*STAGQT
Trigger: CGTTTGACCTGCTGTGCTTCAGTTTAATTGGCTTGG...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR TCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCCAAGCCAATTAAACTaGAGCACAGCAGGTCAAACG +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRPSQLN*STAGQT
Trigger: CGTTTGACCTGCTGTGCTTCAGTTTAATTGGCTTGG...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR TCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAATCACCAGTAAGATCATaGTCATCATCATACGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKSPVRS*SSSYGL
Trigger: AAGACCGTATGATGATGATCATGATCTTACTGGTGA...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR TCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTAGAGTAAAGTGGTTATaGAGTAGTGTCCGGTATACT +
Preference number: 4 (lower is better)
Translates to: KVQGLQACTIALALKFLIRVKWL*SSVRYT
Trigger: AGTATACCGGACACTACTTCATAACCACTTTACTCT...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATTCAGATCTCCTTGCATaGAGACTCAGGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYSDLLA*RLRVTR
Trigger: TCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGA...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTCAGATCTCCTTGCATaGAGACTCAGGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCSDLLA*RLRVTR
Trigger: TCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGA...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTTGGGCTGGTAAACGCTaGTTTTTAGATTGGACAATT +
Preference number: 4 (lower is better)
Translates to: KVQGLQACTIALALKFLIWAGKR*FLDWTI
Trigger: AATTGTCCAATCTAAAAATCAGCGTTTACCAGCCCA...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGCCCTGGCAACATAAATaGCTTCAAGCCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKPWQHK*LQALEL
Trigger: CAGCTCCAAGGCTTGAAGTCATTTATGTTGCCAGGG...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTCTCCGAGACACACAATaGAGCAGAAGTAAATTCCCC +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGLRDTQ*SRSKFP
Trigger: GGGGAATTTACTTCTGCTGCATTGTGTGTCTCGGAG...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456397.7
CDS-3UTR GCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAATTCCTGGGATGCAGTTaGATTTCCAACATGATCCAC +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKFLGCS*ISNMIH
Trigger: GTGGATCATGTTGGAAATGCAACTGCATCCCAGGAA...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATAGCTTCAGATCTCCTTaGATGAAGACTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYSFRSP*MKTQGH
Trigger: GTGACCCTGAGTCTTCATGCAAGGAGATCTGAAGCT...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCAACAGGCTTGCACCATTaGGCTGGCCCTAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPTGLHH*AGPKVS
Trigger: AGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGT...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCTTCATCAAGTTTTCTaGGGTTCGGTTTCACCCTGC +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRLHQVF*GSVSPC
Trigger: GCAGGGTGAAACCGAACCCCAGAAAACTTGATGAAG...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCAGAAAGGAAGACTATaGAAACCCATCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYQKGRL*KPIHSL
Trigger: CAAGCTGTGGATGGGTTTCCATAGTCTTCCTTTCTG...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTGGGAATGCAGAGGTGTaGCTGTTATCTCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGGNAEV*LLSLSD
Trigger: GTCAGAAAGAGATAACAGCCACACCTCTGCATTCCC...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGCCTCTTCCATTGACTTaGCCACATTGCCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKPLPLT*PHCPPL
Trigger: CAAAGGTGGGCAATGTGGCCAAGTCAATGGAAGAGG...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACAGGTTTGTGGGCAGATaGATGATGGGTGTCATTTAC +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYRFVGR*MMGVIY
Trigger: GTAAATGACACCCATCATCCATCTGCCCACAAACCT...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGGGACAGCCACCAAAATaGACCTTTTGTTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKGQPPK*TFCWRR
Trigger: CCTTCTCCAACAAAAGGTTCATTTTGGTGGCTGTCC...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR TCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAAGGAAAGGAACAAATTTaGTTCCCCACAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKGKEQI*FPTTLF
Trigger: AAAAAGTGTTGTGGGGAATCAAATTTGTTCCTTTCC...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCTGGGCTGGTAAACGCTaGTTTTTAGATTGGACAATT +
Preference number: 4 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFWAGKR*FLDWTI
Trigger: AATTGTCCAATCTAAAAATCAGCGTTTACCAGCCCA...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAACAGGACTTGGTTAGGTaGAAAGTAGCATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKQDLVR*KVASYF
Trigger: AAAATAAGATGCTACTTTTCACCTAACCAAGTCCTG...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATACCAAGTTCCTGGGATaGAGTTGCATTTCCAACATG +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYTKFLG*SCISNM
Trigger: CATGTTGGAAATGCAACTGCATCCCAGGAACTTGGT...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTACCAAGTTCCTGGGATaGAGTTGCATTTCCAACATG +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCTKFLG*SCISNM
Trigger: CATGTTGGAAATGCAACTGCATCCCAGGAACTTGGT...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGAAACAGTGCACCAGTTaGTGCCATCACTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKKQCTS*CHHLAS
Trigger: TGATGCCAAGTGATGGCAGCAACTGGTGCACTGTTT...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTCTTCTTAGTAAACAGTaGACCAGTTGCTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCLLSKQ*TSCCHH
Trigger: GTGATGGCAGCAACTGGTGCACTGTTTACTAAGAAG...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTCTTCTTAGTAAACAGTaGACCAGTTGCTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGLLSKQ*TSCCHH
Trigger: GTGATGGCAGCAACTGGTGCACTGTTTACTAAGAAG...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCCCCACAACACTTTTTaGTTGTCATTCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRPHNTF*LSFRLQ
Trigger: TTGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGG...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGAGCTTCAGATCTCCTTaGATGAAGACTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKSFRSP*MKTQGH
Trigger: GTGACCCTGAGTCTTCATGCAAGGAGATCTGAAGCT...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACTTGCACTGCATATACTaGCTCTGGAACATAATGGAG +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYLHCIY*LWNIME
Trigger: CTCCATTATGTTCCAGAGGCAGTATATGCAGTGCAA...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCAGCTCACTGCAATCTCTaGCTCCTCAGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPAHCNL*LLSSSD
Trigger: ATCACTTGAACTGAGGAGGCAGAGATTGCAGTGAGC...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTATTCCATCTAAGGCATaGCACTGGACTGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGIPSKA*HWTEVC
Trigger: ACACACTTCAGTCCAGTGCCATGCCTTAGATGGAAT...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTCAGAAAGGAAGACTATaGAAACCCATCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCQKGRL*KPIHSL
Trigger: CAAGCTGTGGATGGGTTTCCATAGTCTTCCTTTCTG...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAATGCATATACTGCCTCTaGAACATAATGGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKCIYCL*NIMETK
Trigger: TTTTGTCTCCATTATGTTCCAGAGGCAGTATATGCA...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGAGGTTTGTGGGCAGATaGATGATGGGTGTCATTTAC +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRRFVGR*MMGVIY
Trigger: GTAAATGACACCCATCATCCATCTGCCCACAAACCT...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
3UTR CAA 72 bp TTAAATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTaGTATCACATTTGGCCAGGTTTGTGGGCAGATGGA +
Preference number: 4 (lower is better)
Translates to: LNSTPLVHQVFR*YHIWPGLWADG
Trigger: TCCATCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACTCACCAGTAAGATCATaGTCATCATCATACGGTCTT +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYSPVRS*SSSYGL
Trigger: AAGACCGTATGATGATGATCATGATCTTACTGGTGA...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456845.6
CDS-3UTR TCA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGTTGCATTTCCAACATaGTCCACTGGGTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLVAFPT*STGSSH
Trigger: ATGTGAAGACCCAGTGGATCATGTTGGAAATGCAAC...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTGTTGCATTTCCAACATaGTCCACTGGGTCTTCACAT +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEIVAFPT*STGSSH
Trigger: ATGTGAAGACCCAGTGGATCATGTTGGAAATGCAAC...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACAGAGTAAAGTGGTTATaGAGTAGTGTCCGGTATACT +
Preference number: 4 (lower is better)
Translates to: RRASSVVSSLLALQPSSYRVKWL*SSVRYT
Trigger: AGTATACCGGACACTACTTCATAACCACTTTACTCT...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCATCAAAGAGGAGTTTTaGGCCTGTAGAGATGAATTC +
Preference number: 4 (lower is better)
Translates to: TVRRASSVVSSLLALQPSIKEEF*ACRDEF
Trigger: GAATTCATCTCTACAGGCTCAAAACTCCTCTTTGAT...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATCCCTGGCAACATAAATaGCTTCAAGCCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHPWQHK*LQALEL
Trigger: CAGCTCCAAGGCTTGAAGTCATTTATGTTGCCAGGG...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATTCATCATACGGTCTTTaGAAATCGCTGTTTGCATGC +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYSSYGL*KSLFAC
Trigger: GCATGCAAACAGCGATTTGCAAAGACCGTATGATGA...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR GCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGACCAAGTTCCTGGGATaGAGTTGCATTTCCAACATG +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKTKFLG*SCISNM
Trigger: CATGTTGGAAATGCAACTGCATCCCAGGAACTTGGT...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTCTTCTTAGTAAACAGTaGACCAGTTGCTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEILLSKQ*TSCCHH
Trigger: GTGATGGCAGCAACTGGTGCACTGTTTACTAAGAAG...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTGCTTGTCATTCCGTCTaGAAGGTAAAATCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEIACHSV*KVKSGL
Trigger: CAACCCAGATTTTACCTTGCAGACGGAATGACAAGC...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCTTGTCATTCCGTCTaGAAGGTAAAATCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKACHSV*KVKSGL
Trigger: CAACCCAGATTTTACCTTGCAGACGGAATGACAAGC...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGCCCCACAACACTTTTTaGTTGTCATTCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKPHNTF*LSFRLQ
Trigger: TTGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGG...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGCCCCACAACACTTTTTaGTTGTCATTCCGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKPHNTF*LSFRLQ
Trigger: TTGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGG...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCTTGTTAGGTCCACTTaGTCCAAAGGACTGAAGATA +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRLVRST*SKGLKI
Trigger: TATCTTCAGTCCTTTGGAGCAAGTGGACCTAACAAG...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATACAGGCTTGCACCATTaGGCTGGCCCTAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHTGLHH*AGPKVS
Trigger: AGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGT...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATCGCCCGGCTAATTTTTaGATTTTTACTAGAGACTGG +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYRPANF*IFTRDW
Trigger: CCAGTCTCTAGTAAAAATGCAAAAATTAGCCGGGCG...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCAATTCCATCTAAGGCATaGCACTGGACTGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPIPSKA*HWTEVC
Trigger: ACACACTTCAGTCCAGTGCCATGCCTTAGATGGAAT...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAAAGGTTAAGGTCAGTGTaGTACAGAACTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKRLRSV*YRTFKT
Trigger: TGTCTTGAAAGTTCTGTACCACACTGACCTTAACCT...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTAATGACTTCAAGCCTTaGAGCTGCAAAATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KVQGLQACTIALALKFLINDFKP*SCKISF
Trigger: AAAAGAAATTTTGCAGCTCCAAGGCTTGAAGTCATT...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGATCAAAGAGGAGTTTTaGGCCTGTAGAGATGAATTC +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRIKEEF*ACRDEF
Trigger: GAATTCATCTCTACAGGCTCAAAACTCCTCTTTGAT...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGCTTGCTCCAAAGGACTaGAGATATAGCAATGTACAG +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKLAPKD*RYSNVQ
Trigger: CTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAG...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCGCAAACGATGAGAACTaGGTTTTTAAAACCACTTAC +
Preference number: 4 (lower is better)
Translates to: TVRRASSVVSSLLALQPSANDEN*VFKTTY
Trigger: GTAAGTGGTTTTAAAAACTCAGTTCTCATCGTTTGC...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATCTCCGAGACACACAATaGAGCAGAAGTAAATTCCCC +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHLRDTQ*SRSKFP
Trigger: GGGGAATTTACTTCTGCTGCATTGTGTGTCTCGGAG...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR GCA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATTTGCAAATCGCTGTTTaGATGCACGTAATCAAAACG +
Preference number: 4 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYLQIAV*MHVIKT
Trigger: CGTTTTGATTACGTGCATGCAAACAGCGATTTGCAA...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR GCA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGTTGCACTGCATATACTaGCTCTGGAACATAATGGAG +
Preference number: 4 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKLHCIY*LWNIME
Trigger: CTCCATTATGTTCCAGAGGCAGTATATGCAGTGCAA...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATGGGAATGCAGAGGTGTaGCTGTTATCTCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHGNAEV*LLSLSD
Trigger: GTCAGAAAGAGATAACAGCCACACCTCTGCATTCCC...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAAGAGTAAAGTGGTTATaGAGTAGTGTCCGGTATACT +
Preference number: 4 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLRVKWL*SSVRYT
Trigger: AGTATACCGGACACTACTTCATAACCACTTTACTCT...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTATCAAAGAGGAGTTTTaGGCCTGTAGAGATGAATTC +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEIIKEEF*ACRDEF
Trigger: GAATTCATCTCTACAGGCTCAAAACTCCTCTTTGAT...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTGGAAAGGAACAAATTTaGTTCCCCACAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGGKEQI*FPTTLF
Trigger: AAAAAGTGTTGTGGGGAATCAAATTTGTTCCTTTCC...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGGTTTATTCCCCCTACTaGAAATACTCATACAGTACT +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRVYSPY*KYSYST
Trigger: AGTACTGTATGAGTATTTTCAGTAGGGGGAATAAAC...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCAGGACTTGGTTAGGTaGAAAGTAGCATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRQDLVR*KVASYF
Trigger: AAAATAAGATGCTACTTTTCACCTAACCAAGTCCTG...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATTTGTGGGCAGATGGATaGTGGGTGTCATTTACAAGT +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHLWADG*WVSFTS
Trigger: ACTTGTAAATGACACCCATCATCCATCTGCCCACAA...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCTTGACTTGGCCACATTaGCCACCTTTGATTTTATAT +
Preference number: 4 (lower is better)
Translates to: TDDSQITTLAARTTSFVSLTWPH*PPLILY
Trigger: ATATAAAATCAAAGGTGGGCAATGTGGCCAAGTCAA...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTCCAACATGATCCACTaGGTCTTCACATTCTATAAA +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCSNMIH*VFTFYK
Trigger: TTTATAGAATGTGAAGACCCAGTGGATCATGTTGGA...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTCCAACATGATCCACTaGGTCTTCACATTCTATAAA +
Preference number: 4 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGSNMIH*VFTFYK
Trigger: TTTATAGAATGTGAAGACCCAGTGGATCATGTTGGA...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCAGTTTATTCCCCCTACTaGAAATACTCATACAGTACT +
Preference number: 4 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPVYSPY*KYSYST
Trigger: AGTACTGTATGAGTATTTTCAGTAGGGGGAATAAAC...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGGCAAACGATGAGAACTaGGTTTTTAAAACCACTTAC +
Preference number: 4 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKANDEN*VFKTTY
Trigger: GTAAGTGGTTTTAAAAACTCAGTTCTCATCGTTTGC...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTATACATATGGCATCCTTaGACTCCCTTAAACTCTTTT +
Preference number: 4 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLYIWHP*TPLNSF
Trigger: AAAAGAGTTTAAGGGAGTTCAAGGATGCCATATGTA...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTTACATATGGCATCCTTaGACTCCCTTAAACTCTTTT +
Preference number: 4 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEIYIWHP*TPLNSF
Trigger: AAAAGAGTTTAAGGGAGTTCAAGGATGCCATATGTA...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp CTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTACAAACAACAAGATTCTaGGGGCAAAATTTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LRVTRGTWIQIFILLNLLQTTRF*GQNLSQ
Trigger: TTGGCTTAAATTTTGCCCCCAGAATCTTGTTGTTTG...TAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397070.6
CDS-3UTR CCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATGAAGGGAGGTGTTTCTaGTCCTGTTTCTATAAGGAT +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHEGRCF*SCFYKD
Trigger: ATCCTTATAGAAACAGGACCAGAAACACCTCCCTTC...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CCA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTAATGACTTCAAGCCTTaGAGCTGCAAAATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCNDFKP*SCKISF
Trigger: AAAAGAAATTTTGCAGCTCCAAGGCTTGAAGTCATT...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATAGGTTAAGGTCAGTGTaGTACAGAACTTTCAAGACA +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHRLRSV*YRTFKT
Trigger: TGTCTTGAAAGTTCTGTACCACACTGACCTTAACCT...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR TCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATGGAAAGGAACAAATTTaGTTCCCCACAACACTTTTT +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHGKEQI*FPTTLF
Trigger: AAAAAGTGTTGTGGGGAATCAAATTTGTTCCTTTCC...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR GCA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATTTGACTTGGCCACATTaGCCACCTTTGATTTTATAT +
Preference number: 4 (lower is better)
Translates to: FQCVLQSTAISISAEDFHLTWPH*PPLILY
Trigger: ATATAAAATCAAAGGTGGGCAATGTGGCCAAGTCAA...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS GCA 90 bp TGGGCGGCGCCAGCGGATGTGAGCTCAGGCTCAGCGGTCGCATTTTaGGAGTGGCTCCGAGACACACAATGCAGCAGAAGTAAATTCCCC +
Preference number: 5 (lower is better)
Translates to: WAAPADVSSGSAVAF*EWLRDTQCSRSKFP
Trigger: GGGGAATTTACTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAGCCTGAGCTCACATCCGCTGGCGCCGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS GCA 90 bp TCAGGCTCAGCGGTCGCATTTTGCGAGTGGCTCCGAGACACACAATaGAGCAGAAGTAAATTCCCCAGCAGCAAAGCCGCCTGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: SGSAVAFCEWLRDTQ*SRSKFPSSKAAWPH
Trigger: GTGCGGCCAGGCGGCTTTGCTGCTGGGGAATTTACTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS CCA 90 bp GCGCCAGCGGATGTGAGCTCAGGCTCAGCGGTCGCATTTTGCGAGTaGCTCCGAGACACACAATGCAGCAGAAGTAAATTCCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: APADVSSGSAVAFCE*LRDTQCSRSKFPSS
Trigger: GCTGCTGGGGAATTTACTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAGCCTGAGCTCACATCCGCTGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS-3UTR CAA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGCTCAGCGGTCGCATTTaGCGAGTGGCTCCGAGACAC +
Preference number: 5 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMLSGRI*RVAPRH
Trigger: GTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAG...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS CCA 90 bp GGCGGGGCTACTCCGCCCTCTGCTTCTGCTTCTCGATTCCTCTTCTaGGTCTCATGCTCCTCCTTCTTTTGCGCCGAATGCGTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: GGATPPSASASRFLF*VSCSSFFCAECVLQ
Trigger: TTGGAGAACGCATTCGGCGCAAAAGAAGGAGGAGCATGAGACCCAGAAGAGGAATCGAGAAGCAGAAGCAGAGGGCGGAGTAGCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520152.1
ENST00000522142.1
CDS-3UTR CAA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGGTAAAGCCTCTTCCATaGACTTGGCCACATTGCCCA +
Preference number: 5 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMVKPLP*TWPHCP
Trigger: TGGGCAATGTGGCCAAGTCAATGGAAGAGGCTTTAC...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS TCA 90 bp GAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATaGTGGCAGCTCTTCTTAGTAAACAGTGCACCAGTTGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: EMNSEDGAFTRLPGP*WQLFLVNSAPVAAI
Trigger: GATGGCAGCAACTGGTGCACTGTTTACTAAGAAGAGCTGCCATCATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS GCA 90 bp ACCAAATCCCAAGTCCTCCAAGCGTCAACAGCTTCCCTACTGCAGTaGCAGTGTGTCCCAAACAGAATCGATCCACACCAAAACATCCCA +
Preference number: 5 (lower is better)
Translates to: TKSQVLQASTASLLQ*QCVPNRIDPHQNIP
Trigger: TGGGATGTTTTGGTGTGGATCGATTCTGTTTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTGACGCTTGGAGGACTTGGGATTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000522434.5
CDS GCA 90 bp AAACCACCAAATCCCAAGTCCTCCAAGCGTCAACAGCTTCCCTACTaGAGTGCCAGTGTGTCCCAAACAGAATCGATCCACACCAAAACA +
Preference number: 5 (lower is better)
Translates to: KPPNPKSSKRQQLPY*SASVSQTESIHTKT
Trigger: TGTTTTGGTGTGGATCGATTCTGTTTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTGACGCTTGGAGGACTTGGGATTTGGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000522434.5
CDS-3UTR CAA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGAAAATGAACCTTTTGTaGGAGAAGGGAGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMKMNLL*EKGGVS
Trigger: AGAAACACCTCCCTTCTCCAACAAAAGGTTCATTTT...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CAA 90 bp GCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTGGGCCATGATTGACTTGGCCACATaGCCCACCTTTGATTTTATA +
Preference number: 5 (lower is better)
Translates to: ACRDEFRRRSFHPPPWAMIDLAT*PTFDFI
Trigger: TATAAAATCAAAGGTGGGCAATGTGGCCAAGTCAAT...CATGGCCCAGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTCAGGTTGTATCACATTaGGCCAGGTTTGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPQVVSH*ARFVGR
Trigger: TCTGCCCACAAACCTGGCCAAATGTGATACAACCTG...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS GCA 90 bp GGCCTGACCGCCGAACTTGAGACAACCATAACCAAGTTCCTGGGATaGAGTTGCATTTCCAACATGATCCACTGGGTCTTCACATTCTAT +
Preference number: 5 (lower is better)
Translates to: GLTAELETTITKFLG*SCISNMIHWVFTFY
Trigger: ATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAGTTCGGCGGTCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000521060.1
ENST00000522142.1
ENST00000522434.5
CDS-3UTR CAA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTTCCCCACAACACTTTTaGCTTGTCATTCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPSPQHF*LVIPSA
Trigger: TGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGGA...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTGTTCCTGGGATGCAGTaGCATTTCCAACATGATCCA +
Preference number: 5 (lower is better)
Translates to: KVQGLQACTIALALKFLIVPGMQ*HFQHDP
Trigger: TGGATCATGTTGGAAATGCAACTGCATCCCAGGAAC...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACGCCTCTTCCATTGACTaGGCCACATTGCCCACCTTT +
Preference number: 5 (lower is better)
Translates to: RRASSVVSSLLALQPSSYASSID*ATLPTF
Trigger: AAAGGTGGGCAATGTGGCCAAGTCAATGGAAGAGGC...GTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS TCA 90 bp CCAATTAAACTGAAGCACAGCAGGTCAAACGGACAGCCACCAAAATaGACCTTTTGTTGGAGAAGGGAGGTGTTTCTGGTCCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: PIKLKHSRSNGQPPK*TFCWRREVFLVLFL
Trigger: TAGAAACAGGACCAGAAACACCTCCCTTCTCCAACAAAAGGTTCATTTTGGTGGCTGTCCGTTTGACCTGCTGTGCTTCAGTTTAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS-3UTR CAA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATCTCAGCGGTCGCATTTaGCGAGTGGCTCCGAGACAC +
Preference number: 5 (lower is better)
Translates to: FQCVLQSTAISISAEDFHLSGRI*RVAPRH
Trigger: GTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAG...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456397.7
CDS-3UTR CAA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAACACAACACTTTTTGCTaGTCATTCCGTCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKHNTFC*SFRLQG
Trigger: ACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCGCCTCTTCCATTGACTaGGCCACATTGCCCACCTTT +
Preference number: 5 (lower is better)
Translates to: TDDSQITTLAARTTSFVSASSID*ATLPTF
Trigger: AAAGGTGGGCAATGTGGCCAAGTCAATGGAAGAGGC...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS TCA 90 bp AACAGAATGAAAGCGGCCTCAGGACTACAATTATTCCAACAAGGTTaGGGTACAGCTGTGCTCAAGGGCAAGGAATTTAGTGACACACTT +
Preference number: 5 (lower is better)
Translates to: NRMKAASGLQLFQQG*GTAVLKGKEFSDTL
Trigger: AAGTGTGTCACTAAATTCCTTGCCCTTGAGCACAGCTGTACCTCAACCTTGTTGGAATAATTGTAGTCCTGAGGCCGCTTTCATTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524331.1
CDS GCA 90 bp ACCGCCGAACTTGAGACAACCATAACCAAGTTCCTGGGATGCAGTTaGATTTCCAACATGATCCACTGGGTCTTCACATTCTATAAATTC +
Preference number: 5 (lower is better)
Translates to: TAELETTITKFLGCS*ISNMIHWVFTFYKF
Trigger: GAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAGTTCGGCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000521060.1
ENST00000522142.1
ENST00000522434.5
CDS CCA 90 bp ATAACCAAGTTCCTGGGATGCAGTTGCATTTCCAACATGATCCACTaGGTCTTCACATTCTATAAATTCATCAGGTCGGGCAACCACCTA +
Preference number: 5 (lower is better)
Translates to: ITKFLGCSCISNMIH*VFTFYKFIRSGNHL
Trigger: TAGGTGGTTGCCCGACCTGATGAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522434.5
CDS-3UTR CAA 90 bp AAAGTGCAGGGATTACAGGCTTGCACCATTGCGCTGGCCCTAAAGTTTCTTATTATCATCATACGGTCTTaGCAAATCGCTGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: KVQGLQACTIALALKFLIIIIRS*QIAVCM
Trigger: CATGCAAACAGCGATTTGCAAAGACCGTATGATGAT...AATAAGAAACTTTAGGGCCAGCGCAATGGTGCAAGCCTGTAATCCCTGCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456845.6
CDS-3UTR CAA 90 bp ACAGTAAGAAGGGCATCTTCAGTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCGTTCCTGGGATGCAGTaGCATTTCCAACATGATCCA +
Preference number: 5 (lower is better)
Translates to: TVRRASSVVSSLLALQPSVPGMQ*HFQHDP
Trigger: TGGATCATGTTGGAAATGCAACTGCATCCCAGGAAC...GCTTGGTTGAAGGGCTAAAAGACTAGAAACTACTGAAGATGCCCTTCTTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AGTTTTGAGCCTGTAGAGATGAATTCAGAAGACGGAGCTTTCACCCGCCTCCCTACTATCCTTTATGTTTaGTGCATGAGGAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: SFEPVEMNSEDGAFTRLPTILYV*CMRKGT
Trigger: TGTTCCTTTCCTCATGCACAAAACATAAAGGATAGT...AGGGAGGCGGGTGAAAGCTCCGTCTTCTGAATTCATCTCTACAGGCTCAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAATTCATTTTGCTCAACTaGTTAGGTCCACTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKFILLN*LGPLAP
Trigger: TGGAGCAAGTGGACCTAACAAGTTGAGCAAAATGAA...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTCAGGTTGTATCACATTaGGCCAGGTTTGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCQVVSH*ARFVGR
Trigger: TCTGCCCACAAACCTGGCCAAATGTGATACAACCTG...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp CTTCAGATCTCCTTGCATGAAGACTCAGGGTCACAAGAGGAACATGGATCCAAATTTGCAAATCGCTGTTaGCATGCACGTAATCAAAAC +
Preference number: 5 (lower is better)
Translates to: LQISLHEDSGSQEEHGSKFANRC*HARNQN
Trigger: GTTTTGATTACGTGCATGCAAACAGCGATTTGCAAA...TTTGGATCCATGTTCCTCTTGTGACCCTGAGTCTTCATGCAAGGAGATCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CAA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTGTTCCTGGGATGCAGTaGCATTTCCAACATGATCCA +
Preference number: 5 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCVPGMQ*HFQHDP
Trigger: TGGATCATGTTGGAAATGCAACTGCATCCCAGGAAC...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTCCCCACAACACTTTTaGCTTGTCATTCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGSPQHF*LVIPSA
Trigger: TGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGGA...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGGTAAAGCCTCTTCCATaGACTTGGCCACATTGCCCA +
Preference number: 5 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKVKPLP*TWPHCP
Trigger: TGGGCAATGTGGCCAAGTCAATGGAAGAGGCTTTAC...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp GTAGTTTCTAGTCTTTTAGCCCTTCAACCAAGCTCTTACCCCTGGCAACATAAACGAGAACAACTTCTTTaGTCTCCAGCAGCTTTACTG +
Preference number: 5 (lower is better)
Translates to: VVSSLLALQPSSYPWQHKREQLL*SPAALL
Trigger: CAGTAAAGCTGCTGGAGACAAAAGAAGTTGTTCTCG...TTTATGTTGCCAGGGGTAAGAGCTTGGTTGAAGGGCTAAAAGACTAGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS TCA 90 bp TCGTTATCGAAGGGTTTGCTCTTACGACAAAACAAAAACTCACCTTaGGACAACCATAACCAAGTTCCTGGGATGCAGTTGCATTTCCAA +
Preference number: 5 (lower is better)
Translates to: SLSKGLLLRQNKNSP*DNHNQVPGMQLHFQ
Trigger: TTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAGGTGAGTTTTTGTTTTGTCGTAAGAGCAAACCCTTCGATAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519186.1
CDS-3UTR CAA 90 bp GTCCACTTGCTCCAAAGGACTGAAGATATAGCAATGTACAGAAAGGAAGACTATCACAACACTTTTTGCTaGTCATTCCGTCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: VHLLQRTEDIAMYRKEDYHNTFC*SFRLQG
Trigger: ACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG...ATAGTCTTCCTTTCTGTACATTGCTATATCTTCAGTCCTTTGGAGCAAGTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTCATCAGGTTTTCAGGTaGTATCACATTTGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGHQVFR*YHIWPG
Trigger: ACCTGGCCAAATGTGATACAACCTGAAAACCTGATG...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp ATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGGCATCAGGTTTTCAGGTaGTATCACATTTGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: IPKSKEAFLTKQMPSKRRHQVFR*YHIWPG
Trigger: ACCTGGCCAAATGTGATACAACCTGAAAACCTGATG...CCTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS GCA 90 bp AAAACTCACCTTGAGACAACCATAACCAAGTTCCTGGGATGCAGTTaGATTTCCAACATGATCCACTGGGTCTTCACATTCTATAAATTC +
Preference number: 5 (lower is better)
Translates to: KTHLETTITKFLGCS*ISNMIHWVFTFYKF
Trigger: GAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAGGTGAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519186.1
CDS CCA 90 bp ATAACCAAGTTCCTGGGATGCAGTTGCATTTCCAACATGATCCACTaGGTCTTCACATTCTATAAATTCATCAGGTCTGTAATTCACCAG +
Preference number: 5 (lower is better)
Translates to: ITKFLGCSCISNMIH*VFTFYKFIRSVIHQ
Trigger: CTGGTGAATTACAGACCTGATGAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000522142.1
CDS-3UTR CAA 90 bp AATTCCAAAGTCCAAAGAAGCCTTCTTAACCAAACAAATGCCCTCCAAAAGAAGCACAACACTTTTTGCTaGTCATTCCGTCTGCAAGGT +
Preference number: 5 (lower is better)
Translates to: NSKVQRSLLNQTNALQKKHNTFC*SFRLQG
Trigger: ACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG...CTTCTTTTGGAGGGCATTTGTTTGGTTAAGAAGGCTTCTTTGGACTTTGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp CTGCCTCTGGAACATAATGGAGACAAAAGAGGGCTTAATAGGATGGCTCATTTCACTATCCTTTATGTTTaGTGCATGAGGAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: LPLEHNGDKRGLNRMAHFTILYV*CMRKGT
Trigger: TGTTCCTTTCCTCATGCACAAAACATAAAGGATAGT...GAAATGAGCCATCCTATTAAGCCCTCTTTTGTCTCCATTATGTTCCAGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCTTCATTTTGCTCAACTaGTTAGGTCCACTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: TDDSQITTLAARTTSFVSFILLN*LGPLAP
Trigger: TGGAGCAAGTGGACCTAACAAGTTGAGCAAAATGAA...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp TTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTTTGTGGGCAGATTCTTTCAACTTAGATaGCAAACGATGAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: FSPSGFQVVSHLARFVGRFFQLR*QTMRTE
Trigger: CTCAGTTCTCATCGTTTGCAATCTAAGTTGAAAGAA...TCTGCCCACAAACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGCGAGAACAACTTCTTTaGTCTCCAGCAGCTTTACTG +
Preference number: 5 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKREQLL*SPAALL
Trigger: CAGTAAAGCTGCTGGAGACAAAAGAAGTTGTTCTCG...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp AATAGTACTCCTTTAGTCCATCAGGTTTTCAGGTTGTATCACATTTGGCCAGGTGCTTCTAATTTAACCTaGAGGGAAGGACACTGTAGT +
Preference number: 5 (lower is better)
Translates to: NSTPLVHQVFRLYHIWPGASNLT*REGHCS
Trigger: ACTACAGTGTCCTTCCCTCAAGGTTAAATTAGAAGC...ACCTGGCCAAATGTGATACAACCTGAAAACCTGATGGACTAAAGGAGTACTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS CCA 90 bp ATAACCAAGTTCCTGGGATGCAGTTGCATTTCCAACATGATCCACTaGGTCTTCACATTCTATAAATTCATCAGGTCTTTTGTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: ITKFLGCSCISNMIH*VFTFYKFIRSFVGE
Trigger: TTCTCCAACAAAAGACCTGATGAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521060.1
CDS-3UTR CAA 90 bp AGTCAGAATTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATCATCATACGGTCTTaGCAAATCGCTGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: SQNFSVYYNPRPFLFLLKIIIRS*QIAVCM
Trigger: CATGCAAACAGCGATTTGCAAAGACCGTATGATGAT...CTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAATTCTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CAA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATTCCCCACAACACTTTTaGCTTGTCATTCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FQCVLQSTAISISAEDFHSPQHF*LVIPSA
Trigger: TGCAGACGGAATGACAAGCAAAAAGTGTTGTGGGGA...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCATTCATTTTGCTCAACTaGTTAGGTCCACTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPFILLN*LGPLAP
Trigger: TGGAGCAAGTGGACCTAACAAGTTGAGCAAAATGAA...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp GACTCAGGGTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTATTGACTTGGCCACATaGCCCACCTTTGATTTTATA +
Preference number: 5 (lower is better)
Translates to: DSGSQEEHGSKYSFCSTCIDLAT*PTFDFI
Trigger: TATAAAATCAAAGGTGGGCAATGTGGCCAAGTCAAT...ACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGACCCTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS GCA 90 bp AGTAAGATCATGATCATCATCATACGGTCTTTGCAAATCGCTGTTTaGATGCACGTAATCAAAACGGGCAAAAGACATTTCTTCATCAAG +
Preference number: 5 (lower is better)
Translates to: SKIMIIIIRSLQIAV*MHVIKTGKRHFFIK
Trigger: CTTGATGAAGAAATGTCTTTTGCCCGTTTTGATTACGTGCATGCAAACAGCGATTTGCAAAGACCGTATGATGATGATCATGATCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS-3UTR CAA 90 bp CACAACACTTTTTGCTTGTCATTCCGTCTGCAAGGTAAAATCTGGGTTGAAATTAAAATGAACCTTTTGTaGGAGAAGGGAGGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: HNTFCLSFRLQGKIWVEIKMNLL*EKGGVS
Trigger: AGAAACACCTCCCTTCTCCAACAAAAGGTTCATTTT...AATTTCAACCCAGATTTTACCTTGCAGACGGAATGACAAGCAAAAAGTGTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397070.6
ENST00000456845.6
CDS-3UTR CAA 90 bp ACTGATGATTCTCAAATTACCACTCTAGCAGCGAGAACAACTTCTTTTGTCTCCACTATCCTTTATGTTTaGTGCATGAGGAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: TDDSQITTLAARTTSFVSTILYV*CMRKGT
Trigger: TGTTCCTTTCCTCATGCACAAAACATAAAGGATAGT...GGAGACAAAAGAAGTTGTTCTCGCTGCTAGAGTGGTAATTTGAGAATCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp GTCACAAGAGGAACATGGATCCAAATATTCATTTTGCTCAACTTGTTAGGTCCATTCTTTCAACTTAGATaGCAAACGATGAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: VTRGTWIQIFILLNLLGPFFQLR*QTMRTE
Trigger: CTCAGTTCTCATCGTTTGCAATCTAAGTTGAAAGAA...TGGACCTAACAAGTTGAGCAAAATGAATATTTGGATCCATGTTCCTCTTGTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS-3UTR CAA 90 bp TTTCAGTGTGTATTACAATCCACGGCCATTTCTATTTCTGCTGAAGATTTTCATGCTTCTAATTTAACCTaGAGGGAAGGACACTGTAGT +
Preference number: 5 (lower is better)
Translates to: FQCVLQSTAISISAEDFHASNLT*REGHCS
Trigger: ACTACAGTGTCCTTCCCTCAAGGTTAAATTAGAAGC...ATGAAAATCTTCAGCAGAAATAGAAATGGCCGTGGATTGTAATACACACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456397.7
ENST00000456845.6
CDS TCA 72 bp TGGGCGTGCCCGGCAGCCGACGGGGCGGGGCGGATATaGCTGGCGGGCCGACTAGTGCTGGTTGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: WACPAADGAGRI*LAGRLVLVATA
Trigger: GGCGGTGGCAACCAGCACTAGTCGGCCCGCCAGTCATATCCGCCCCGCCCCGTCGGCTGCCGGGCACGCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520152.1
ENST00000522142.1
CDS CAA 72 bp GCCAGCGGATGTGAGCTCAGGCTCAGCGGTCGCATTTaGCGAGTGGCTCCGAGACACACAATGCAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: ASGCELRLSGRI*RVAPRHTMQQK
Trigger: CTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAGCCTGAGCTCACATCCGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS GCA 72 bp CCAGCGGATGTGAGCTCAGGCTCAGCGGTCGCATTTTaGGAGTGGCTCCGAGACACACAATGCAGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: PADVSSGSAVAF*EWLRDTQCSRS
Trigger: ACTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAGCCTGAGCTCACATCCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS GCA 72 bp GCGGTCGCATTTTGCGAGTGGCTCCGAGACACACAATaGAGCAGAAGTAAATTCCCCAGCAGCAAAGCCGCC +
Preference number: 6 (lower is better)
Translates to: AVAFCEWLRDTQ*SRSKFPSSKAA
Trigger: GGCGGCTTTGCTGCTGGGGAATTTACTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS GCA 72 bp CCCTGGGCCATGATGGCAGCTCTTCTTAGTAAACAGTaGACCAGTTGCTGCCATCACTTGGCATCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PWAMMAALLSKQ*TSCCHHLASAL
Trigger: GAGGGCTGATGCCAAGTGATGGCAGCAACTGGTGCACTGTTTACTAAGAAGAGCTGCCATCATGGCCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
CDS GCA 72 bp CAAGTCCTCCAAGCGTCAACAGCTTCCCTACTGCAGTaGCAGTGTGTCCCAAACAGAATCGATCCACACCAA +
Preference number: 6 (lower is better)
Translates to: QVLQASTASLLQ*QCVPNRIDPHQ
Trigger: TTGGTGTGGATCGATTCTGTTTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTGACGCTTGGAGGACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000522434.5
CDS GCA 72 bp AATCCCAAGTCCTCCAAGCGTCAACAGCTTCCCTACTaGAGTGCCAGTGTGTCCCAAACAGAATCGATCCAC +
Preference number: 6 (lower is better)
Translates to: NPKSSKRQQLPY*SASVSQTESIH
Trigger: GTGGATCGATTCTGTTTGGGACACACTGGCACTGCAGTAGGGAAGCTGTTGACGCTTGGAGGACTTGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000522434.5
CDS CCA 72 bp GATGTGAGCTCAGGCTCAGCGGTCGCATTTTGCGAGTaGCTCCGAGACACACAATGCAGCAGAAGTAAATTC +
Preference number: 6 (lower is better)
Translates to: DVSSGSAVAFCE*LRDTQCSRSKF
Trigger: GAATTTACTTCTGCTGCATTGTGTGTCTCGGAGCCACTCGCAAAATGCGACCGCTGAGCCTGAGCTCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000519186.1
CDS GCA 72 bp TCTGCTTCTGCTTCTCGATTCCTCTTCTGGGTCTCATaGTCCTCCTTCTTTTGCGCCGAATGCGTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: SASASRFLFWVS*SSFFCAECVLQ
Trigger: TTGGAGAACGCATTCGGCGCAAAAGAAGGAGGAGCATGAGACCCAGAAGAGGAATCGAGAAGCAGAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520152.1
ENST00000522142.1
CDS TCA 72 bp CTGAAGCACAGCAGGTCAAACGGACAGCCACCAAAATaGACCTTTTGTTGGAGAAGGGAGGTGTTTCTGGTC +
Preference number: 6 (lower is better)
Translates to: LKHSRSNGQPPK*TFCWRREVFLV
Trigger: GACCAGAAACACCTCCCTTCTCCAACAAAAGGTTCATTTTGGTGGCTGTCCGTTTGACCTGCTGTGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS TCA 72 bp TTTCACCCTGCTGACCCCTTTCCAAGCCAATTAAACTaGAGCACAGCAGGTCAAACGGACAGCCACCAAAAT +
Preference number: 6 (lower is better)
Translates to: FHPADPFPSQLN*STAGQTDSHQN
Trigger: ATTTTGGTGGCTGTCCGTTTGACCTGCTGTGCTTCAGTTTAATTGGCTTGGAAAGGGGTCAGCAGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS GCA 72 bp GCCGAACTTGAGACAACCATAACCAAGTTCCTGGGATaGAGTTGCATTTCCAACATGATCCACTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: AELETTITKFLG*SCISNMIHWVF
Trigger: GAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAGTTCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000521060.1
ENST00000522142.1
ENST00000522434.5
CDS GCA 72 bp ACTCACCTTGAGACAACCATAACCAAGTTCCTGGGATaGAGTTGCATTTCCAACATGATCCACTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: THLETTITKFLG*SCISNMIHWVF
Trigger: GAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAGGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519186.1
CDS CAA 90 bp GAAGCACAGCAGGTCAAACGGACAGCCACCAAAATGAACCTTTTGTaGGAGAAGGGAGGTGTTTCTGGTCCTGTTTCTATAAGGATTCTA +
Preference number: 6 (lower is better)
Translates to: EAQQVKRTATKMNLL*EKGGVSGPVSIRIL
Trigger: TAGAATCCTTATAGAAACAGGACCAGAAACACCTCCCTTCTCCAACAAAAGGTTCATTTTGGTGGCTGTCCGTTTGACCTGCTGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS TCA 72 bp AAAGCGGCCTCAGGACTACAATTATTCCAACAAGGTTaGGGTACAGCTGTGCTCAAGGGCAAGGAATTTAGT +
Preference number: 6 (lower is better)
Translates to: KAASGLQLFQQG*GTAVLKGKEFS
Trigger: ACTAAATTCCTTGCCCTTGAGCACAGCTGTACCTCAACCTTGTTGGAATAATTGTAGTCCTGAGGCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524331.1
CDS GCA 72 bp CTTGAGACAACCATAACCAAGTTCCTGGGATGCAGTTaGATTTCCAACATGATCCACTGGGTCTTCACATTC +
Preference number: 6 (lower is better)
Translates to: LETTITKFLGCS*ISNMIHWVFTF
Trigger: GAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAACTTGGTTATGGTTGTCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000517872.1
ENST00000519186.1
ENST00000521060.1
ENST00000522142.1
ENST00000522434.5
CDS CCA 72 bp TTCCTGGGATGCAGTTGCATTTCCAACATGATCCACTaGGTCTTCACATTCTATAAATTCATCAGGTCGGGC +
Preference number: 6 (lower is better)
Translates to: FLGCSCISNMIH*VFTFYKFIRSG
Trigger: GCCCGACCTGATGAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522434.5
CDS TCA 72 bp TCCTTCATAAGGAAACCAAATATCTTGTTCAGTCACTaGCCCTGGCCATACTGGAAATTTCCAGTAACGGTC +
Preference number: 6 (lower is better)
Translates to: SFIRKPNILFSH*PWPYWKFPVTV
Trigger: GACCGTTACTGGAAATTTCCAGTATGGCCAGGGTCAGTGACTGAACAAGATATTTGGTTTCCTTATGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519186.1
CDS CCA 72 bp TTCCTGGGATGCAGTTGCATTTCCAACATGATCCACTaGGTCTTCACATTCTATAAATTCATCAGGTCTGTA +
Preference number: 6 (lower is better)
Translates to: FLGCSCISNMIH*VFTFYKFIRSV
Trigger: TACAGACCTGATGAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000522142.1
CDS GCA 72 bp ATGATCATCATCATACGGTCTTTGCAAATCGCTGTTTaGATGCACGTAATCAAAACGGGCAAAAGACATTTC +
Preference number: 6 (lower is better)
Translates to: MIIIIRSLQIAV*MHVIKTGKRHF
Trigger: GAAATGTCTTTTGCCCGTTTTGATTACGTGCATGCAAACAGCGATTTGCAAAGACCGTATGATGATGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS CCA 72 bp TTCCTGGGATGCAGTTGCATTTCCAACATGATCCACTaGGTCTTCACATTCTATAAATTCATCAGGTCTTTT +
Preference number: 6 (lower is better)
Translates to: FLGCSCISNMIH*VFTFYKFIRSF
Trigger: AAAAGACCTGATGAATTTATAGAATGTGAAGACCCAGTGGATCATGTTGGAAATGCAACTGCATCCCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521060.1
CDS CAA 72 bp CATGATCATCATCATACGGTCTTTGCAAATCGCTGTTaGCATGCACGTAATCAAAACGGGCAAAAGACATTT +
Preference number: 6 (lower is better)
Translates to: HDHHHTVFANRC*HARNQNGQKTF
Trigger: AAATGTCTTTTGCCCGTTTTGATTACGTGCATGCAAACAGCGATTTGCAAAGACCGTATGATGATGATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS CAA 72 bp TTCACCAGTAAGATCATGATCATCATCATACGGTCTTaGCAAATCGCTGTTTGCATGCACGTAATCAAAACG +
Preference number: 6 (lower is better)
Translates to: FTSKIMIIIIRS*QIAVCMHVIKT
Trigger: CGTTTTGATTACGTGCATGCAAACAGCGATTTGCAAAGACCGTATGATGATGATCATGATCTTACTGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456845.6
ENST00000517872.1
ENST00000520152.1
ENST00000522142.1
CDS TCA 72 bp AACATCCCAGGAAGAAGGAGTAGAGTAAAGTGGTTATaGAGTAGTGTCCGGTATACTTTATACAAGGTTTAT +
Preference number: 6 (lower is better)
Translates to: NIPGRRSRVKWL*SSVRYTLYKVY
Trigger: ATAAACCTTGTATAAAGTATACCGGACACTACTTCATAACCACTTTACTCTACTCCTTCTTCCTGGGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397070.6
ENST00000456397.7
ENST00000456845.6
ENST00000522142.1
ENST00000522434.5