Pregenerated sensors for TLX3 (Homo sapiens)
Ensembl gene IDs: ENSG00000164438Ensembl transcript IDs: ENST00000296921.6
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCCCCGTCTGTGGCCGCGCCCTaGGGCCTACTCGGGCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PWHFPQRPGRLPFLQRPPSVAAP*GLLGLG Trigger: GCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGA...CGGGGGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | CCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCCCCGATGGGCTCGTGCGGGTaGGGGGTCTGCGCGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PWHFPQRPGRLPFLQRPPMGSCG*GVCALA Trigger: CGCCAGCGCGCAGACCCCGCACCCGCACGAGCCCAT...CGGGGGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGGTTACGGCGCGGCCATaGAGCGCCCGGCGCCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRVTARP*SARRLS Trigger: CGAGAGGCGCCGGGCGCTCCATGGCCGCGCCGTAAC...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGGCAGAGACGGGTATGTaGCGCCCGGACGGCCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRAETGM*RPDGPR Trigger: CCGGGGGCCGTCCGGGCGCCACATACCCGTCTCTGC...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | GGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCAAGCTGATGGGCTCGTaGGGGTGCGGGGTCTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: GPLALPPAAGSAALPPAAKLMGS*GCGVCA Trigger: CGCGCAGACCCCGCACCCGCACGAGCCCATCAGCTT...GGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | TGTGCGGCCGCGCGGAGCTCGGGCCCTACCCCCTTCCGCGGCCCGCCAGTCTGTCGCTCCTCCGCCGTCTaGCGCCGCCACTTGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CAAARSSGPTPFRGPPVCRSSAV*RRHLVL Trigger: GAGGACCAAGTGGCGGCGGCAGACGGCGGAGGAGCG...ACAGACTGGCGGGCCGCGGAAGGGGGTAGGGCCCGAGCTCCGCGCGGCCGCACA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGGATCCGTGGCGACGGTaGGCGCTGGTGGGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRDPWRR*ALVGSH Trigger: GTGTGAGCCCACCAGCGCGCACCGTCGCCACGGATC...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | TTCCGCGGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGGGCGACGGTGCGCGCTaGTGGGCTCACACCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: FRGPPVCGRALGPTRARRGDGAR*WAHTRE Trigger: CTCCCTGGTGTGAGCCCACCAGCGCGCACCGTCGCC...CCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCCGCGGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCTCTGTGGCCGCGCCCTaGGGCCTACTCGGGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: ARQSVAAPWGLLGLGGPFSVAAP*GLLGLG Trigger: GCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGA...GAAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR TCA 90 bp | GCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCGTTGCAGCTGCAGCATaGGCCGGCTCGCCTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ARQSVAAPWGLLGLGGPFVAAAA*AGSPAA Trigger: GGCAGCAGGCGAGCCGGCTCATGCTGCAGCTGCAAC...GAAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGAGCCTAAACGCAGGGTaGCCCGGGCCCCTGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRSLNAG*PGPLAL Trigger: AAGTGCCAGGGGCCCGGGGCACCCTGCGTTTAGGCT...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | TGTGCGGCCGCGCGGAGCTCGGGCCCTACCCCCTTCCGCGGCCCGCCAGTCTGTCAAGGCTGGAGACCGTaGGCACGGAGGGCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CAAARSSGPTPFRGPPVCQGWRP*ARRAWR Trigger: CCGCCATGCCCTCCGTGCCCACGGTCTCCAGCCTTG...ACAGACTGGCGGGCCGCGGAAGGGGGTAGGGCCCGAGCTCCGCGCGGCCGCACA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTGACGGTGCGCGCTGGTaGGCTCACACCAGGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GPPVCGRALGPTRARRPLDGARW*AHTREV Trigger: CACCTCCCTGGTGTGAGCCCACCAGCGCGCACCGTC...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR TCA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTGTGCGGCCGCCGCTGTaGAGCGGTCTTTCACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GPPVCGRALGPTRARRPLVRPPL*SGLSRS Trigger: GCTTCGTGAAAGACCGCTTCACAGCGGCGGCCGCAC...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | CCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCCCCGTGGAAGGCGTCGTGTTaGAGCTGCAGCATGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PWHFPQRPGRLPFLQRPPWKASC*SCSMSR Trigger: CCGGCTCATGCTGCAGCTGCAACACGACGCCTTCCA...CGGGGGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCGCGGGTGCGCTGTCCTaGTCCGGGCTGTTAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: ARQSVAAPWGLLGLGGPFAGALS*SGLLRI Trigger: GATCCTTAACAGCCCGGACCAGGACAGCGCACCCGC...GAAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR TCA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCTCACACCAGGGAGGTaGCAGCGGGAACCTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPPVCGRALGPTRARRPLLTPGR*QREPWN Trigger: GTTCCAAGGTTCCCGCTGTCACCTCCCTGGTGTGAG...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | TTCCGCGGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCGGGAAAAGGACGTaGGCGGCTTCTTACGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FRGPPVCGRALGPTRARRPGKRT*AASYAW Trigger: CCAAGCGTAAGAAGCCGCGCACGTCCTTTTCCCGGG...CCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCCGCGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGTCCAGCTCGCAGATCTaGACCCGGGAAAAGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRSSSQI*TREKDV Trigger: CACGTCCTTTTCCCGGGTGCAGATCTGCGAGCTGGA...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | TTCCGCGGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCAGAGCGGGTCAGGCTaGATGGAGTCGTTGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FRGPPVCGRALGPTRARRQSGSG*MESLRL Trigger: GAGCCTCAACGACTCCATCCAGCCTGACCCGCTCTG...CCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCCGCGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR TCA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCGCCTCTCGTCGCACTaGAACTTTGCCAAGAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: GPPVCGRALGPTRARRPLRLSSH*NFAKSA Trigger: CGCACTCTTGGCAAAGTTTCAGTGCGACGAGAGGCG...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR TCA 90 bp | TTCCGCGGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCATCCAGGGGAAATTaGGACCGCCAAGGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FRGPPVCGRALGPTRARRPSRGN*DRQGWR Trigger: TCTCCAGCCTTGGCGGTCTCAATTTCCCCTGGATGG...CCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCCGCGGAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | GGGCGGAGAAACGTAAGGCGCTTTCTTGTCAGGCCCGGGCCTGGGGCGGGACGGGGTGAAGGGCGTGAGTaGGGCCGCCGCTGTGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: GRRNVRRFLVRPGPGAGRGEGRE*GRRCEA Trigger: CGCTTCACAGCGGCGGCCGCACTCACGCCCTTCACC...CCGTCCCGCCCCAGGCCCGGGCCTGACAAGAAAGCGCCTTACGTTTCTCCGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCCCAAGAGTGACGAGTTGTaGAGACAGAGCGGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: APGTSPSGRVGCPSSSGPKSDEL*RQSGSG Trigger: GCCTGACCCGCTCTGTCTGCACAACTCGTCACTCTT...GGGGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GGGCGGAGAAACGTAAGGCGCTTTCTTGTCAGGCCCGGGCCTGGGGCGGGACGGTGGGCACGGAGGGCATaGCGGGTAGCGCGCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRRNVRRFLVRPGPGAGRWARRA*RVARLA Trigger: TGCCAAGCGCGCTACCCGCCATGCCCTCCGTGCCCA...CCGTCCCGCCCCAGGCCCGGGCCTGACAAGAAAGCGCCTTACGTTTCTCCGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR TCA 90 bp | GGGCGGAGAAACGTAAGGCGCTTTCTTGTCAGGCCCGGGCCTGGGGCGGGACGGGCGCGTCCGTCATTTTaGGGGACTTGGCGAGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: GRRNVRRFLVRPGPGAGRARPSF*GTWRAP Trigger: CGGCGCTCGCCAAGTCCCTCAAAATGACGGACGCGC...CCGTCCCGCCCCAGGCCCGGGCCTGACAAGAAAGCGCCTTACGTTTCTCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | GGGCGGAGAAACGTAAGGCGCTTTCTTGTCAGGCCCGGGCCTGGGGCGGGACGGGCGTCGTGTTGCAGCTaGAGCATGAGCCGGCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: GRRNVRRFLVRPGPGAGRASCCS*SMSRLA Trigger: GGCGAGCCGGCTCATGCTGCAGCTGCAACACGACGC...CCGTCCCGCCCCAGGCCCGGGCCTGACAAGAAAGCGCCTTACGTTTCTCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR GCA 90 bp | GCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCTCCTCCTCCCAGGGCTaGAGATTCTGCAGAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ARQSVAAPWGLLGLGGPFSSSQG*RFCRAK Trigger: CTTTGCTCTGCAGAATCTGCAGCCCTGGGAGGAGGA...GAAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTCGCGGGGGAAGCAGGTaGCCGGTTTCTAAAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GPPVCGRALGPTRARRPLRGGSR*PVSKEK Trigger: TTTTTCTTTAGAAACCGGCCACCTGCTTCCCCCGCG...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTGGAAAAGAAGAAGAGTaGACCCAGCCTAAACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPPVCGRALGPTRARRPLGKEEE*TQPKRR Trigger: CCTGCGTTTAGGCTGGGTCCACTCTTCTTCTTTTCC...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CCA 90 bp | GGGCGGAGAAACGTAAGGCGCTTTCTTGTCAGGCCCGGGCCTGGGGCGGGACGGTCGTTGAGGCTCTTTTaGAAGGCGTCGTGTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRRNVRRFLVRPGPGAGRSLRLF*KASCCS Trigger: GCTGCAACACGACGCCTTCCAAAAGAGCCTCAACGA...CCGTCCCGCCCCAGGCCCGGGCCTGACAAGAAAGCGCCTTACGTTTCTCCGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | GGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGCCCCTTTGGCGGGTAGCGCGCTaGGCAGAGGCGGTGGCACGG | + |
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Preference number: 5 (lower is better) Translates to: GPPVCGRALGPTRARRPLWRVAR*AEAVAR Trigger: CCGTGCCACCGCCTCTGCCAAGCGCGCTACCCGCCA...AAGGGGCCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGTGCGCGTCCGTCATTTaGAGGGACTTGGCGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRCASVI*RDLASA Trigger: GGCGCTCGCCAAGTCCCTCAAAATGACGGACGCGCA...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | TGTGCGGCCGCGCGGAGCTCGGGCCCTACCCCCTTCCGCGGCCCGCCAGTCTGTGTCATTTTGAGGGACTaGGCGAGCGCCGCCCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: CAAARSSGPTPFRGPPVCVILRD*ASAALS Trigger: CGAGAGGGCGGCGCTCGCCAAGTCCCTCAAAATGAC...ACAGACTGGCGGGCCGCGGAAGGGGGTAGGGCCCGAGCTCCGCGCGGCCGCACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | GCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCCCTCCATCCAGGGGAAATaGAGACCGCCAAGGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: APGTSPSGRVGCPSSSGPSIQGK*RPPRLE Trigger: CTCCAGCCTTGGCGGTCTCAATTTCCCCTGGATGGA...GGGGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | TTCCGCGGCCCGCCAGTCTGTGGCCGCGCCCTGGGGCCTACTCGGGCTAGGCGGTTGGAAGGCGTCGTGTaGCAGCTGCAGCATGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: FRGPPVCGRALGPTRARRLEGVV*QLQHEP Trigger: CGGCTCATGCTGCAGCTGCAACACGACGCCTTCCAA...CCGCCTAGCCCGAGTAGGCCCCAGGGCGCGGCCACAGACTGGCGGGCCGCGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | CCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGCCCCCGGGCTGGATGGAGTCGTaGAGGCTCTTTTGGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: PWHFPQRPGRLPFLQRPPGWMES*RLFWKA Trigger: CGCCTTCCAAAAGAGCCTCAACGACTCCATCCAGCC...CGGGGGCCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | CCGGGCCCCTGGCACTTCCCCCAGCGGCCGGGTCGGCTGCCCTTCCTCCAGCGGGTCGTTGAGGCTCTTTaGGAAGGCGTCGTGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PGPWHFPQRPGRLPFLQRVVEAL*EGVVLQ Trigger: CTGCAACACGACGCCTTCCAAAAGAGCCTCAACGAC...CCGCTGGAGGAAGGGCAGCCGACCCGGCCGCTGGGGGAAGTGCCAGGGGCCCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS-3UTR CAA 90 bp | TGTGCGGCCGCGCGGAGCTCGGGCCCTACCCCCTTCCGCGGCCCGCCAGTCTGTGTGACAGCGGGAACCTaGGAACTATCCTCCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: CAAARSSGPTPFRGPPVCVTAGT*ELSSSQ Trigger: CTGGGAGGAGGATAGTTCCAAGGTTCCCGCTGTCAC...ACAGACTGGCGGGCCGCGGAAGGGGGTAGGGCCCGAGCTCCGCGCGGCCGCACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS TCA 90 bp | CGATCCGTGGCGACGGTGCGCGCTGGTGGGCTCACACCAGGGAGGTaGCAGCGGGAACCTTGGAACTATCCTCCTCCCAGGGCTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: RSVATVRAGGLTPGR*QREPWNYPPPRAAD Trigger: ATCTGCAGCCCTGGGAGGAGGATAGTTCCAAGGTTCCCGCTGTCACCTCCCTGGTGTGAGCCCACCAGCGCGCACCGTCGCCACGGATCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS GCA 90 bp | TGGATGGAGTCGTTGAGGCTCTTTTGGAAGGCGTCGTGTTGCAGCTaGAGCATGAGCCGGCTCGCCTGCTGCCGCTCCGCCTCCCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WMESLRLFWKASCCS*SMSRLACCRSASRS Trigger: GGAGCGGGAGGCGGAGCGGCAGCAGGCGAGCCGGCTCATGCTGCAGCTGCAACACGACGCCTTCCAAAAGAGCCTCAACGACTCCATCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS GCA 90 bp | TCAGGCTGGATGGAGTCGTTGAGGCTCTTTTGGAAGGCGTCGTGTTaGAGCTGCAGCATGAGCCGGCTCGCCTGCTGCCGCTCCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGWMESLRLFWKASC*SCSMSRLACCRSAS Trigger: GGAGGCGGAGCGGCAGCAGGCGAGCCGGCTCATGCTGCAGCTGCAACACGACGCCTTCCAAAAGAGCCTCAACGACTCCATCCAGCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS CCA 72 bp | GTCCGGGGCGCCCGGCTGGGTGGGGGCGGCGATCCGTaGCGACGGTGCGCGCTGGTGGGCTCACACCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VRGARLGGGGDP*RRCALVGSHQG Trigger: TCCCTGGTGTGAGCCCACCAGCGCGCACCGTCGCCACGGATCGCCGCCCCCACCCAGCCGGGCGCCCCGGAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS CCA 72 bp | GACCGCCAAGGCTGGAGACCGTGGGCACGGAGGGCATaGCGGGTAGCGCGCTTGGCAGAGGCGGTGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: DRQGWRPWARRA*RVARLAEAVAR Trigger: CCGTGCCACCGCCTCTGCCAAGCGCGCTACCCGCCATGCCCTCCGTGCCCACGGTCTCCAGCCTTGGCGGTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS CCA 72 bp | GTGGGGGCGGCGATCCGTGGCGACGGTGCGCGCTGGTaGGCTCACACCAGGGAGGTGACAGCGGGAACCTTG | + |
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Preference number: 6 (lower is better) Translates to: VGAAIRGDGARW*AHTREVTAGTL Trigger: CAAGGTTCCCGCTGTCACCTCCCTGGTGTGAGCCCACCAGCGCGCACCGTCGCCACGGATCGCCGCCCCCAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS TCA 72 bp | GCGACGGTGCGCGCTGGTGGGCTCACACCAGGGAGGTaGCAGCGGGAACCTTGGAACTATCCTCCTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATVRAGGLTPGR*QREPWNYPPPR Trigger: CCTGGGAGGAGGATAGTTCCAAGGTTCCCGCTGTCACCTCCCTGGTGTGAGCCCACCAGCGCGCACCGTCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS GCA 72 bp | TCGTTGAGGCTCTTTTGGAAGGCGTCGTGTTGCAGCTaGAGCATGAGCCGGCTCGCCTGCTGCCGCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SLRLFWKASCCS*SMSRLACCRSA Trigger: GGCGGAGCGGCAGCAGGCGAGCCGGCTCATGCTGCAGCTGCAACACGACGCCTTCCAAAAGAGCCTCAACGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS CAA 90 bp | GTGCAGACAGAGCGGGTCAGGCTGGATGGAGTCGTTGAGGCTCTTTaGGAAGGCGTCGTGTTGCAGCTGCAGCATGAGCCGGCTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VQTERVRLDGVVEAL*EGVVLQLQHEPARL Trigger: CAGGCGAGCCGGCTCATGCTGCAGCTGCAACACGACGCCTTCCAAAAGAGCCTCAACGACTCCATCCAGCCTGACCCGCTCTGTCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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| CDS CCA 72 bp | AGCGGGTCAGGCTGGATGGAGTCGTTGAGGCTCTTTTaGAAGGCGTCGTGTTGCAGCTGCAGCATGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SGSGWMESLRLF*KASCCSCSMSR Trigger: CCGGCTCATGCTGCAGCTGCAACACGACGCCTTCCAAAAGAGCCTCAACGACTCCATCCAGCCTGACCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296921.6 |
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