Pregenerated sensors for TLX1NB (Homo sapiens)
Ensembl gene IDs: ENSG00000236311Ensembl transcript IDs: ENST00000425505.1, ENST00000445873.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTCCAGTTGGGCAGAGACATCCCTTCCTCAGACGCCTTGTGGGCTaGACTCCTTTGGCCCAGTTCAAAGTGAGGGGAGGGCTCCCAACA | + |
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Preference number: 5 (lower is better) Translates to: SPVGQRHPFLRRLVG*TPLAQFKVRGGLPT Trigger: TGTTGGGAGCCCTCCCCTCACTTTGAACTGGGCCAAAGGAGTCCAGCCCACAAGGCGTCTGAGGAAGGGATGTCTCTGCCCAACTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 90 bp | AACAAGGAGCCTGTTTCCAAGCAAAGGTTCAAGGGTTTCCTTTCCTaGGCTCCCGCCCCCTTGCTCAGGGCAGCCACCCATTCTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: NKEPVSKQRFKGFLS*APAPLLRAATHSAL Trigger: CAGGGCAGAATGGGTGGCTGCCCTGAGCAAGGGGGCGGGAGCCCAGGAAAGGAAACCCTTGAACCTTTGCTTGGAAACAGGCTCCTTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS CCA 90 bp | CCCTGCCTCCACCAAGGTTCCTCAGTGTTCTCCGTAGGCGGATTCTaGATTTCTCCAGCTGAGGTGACCTGGGCACCAGATCCTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PCLHQGSSVFSVGGF*ISPAEVTWAPDPSG Trigger: CCCAGAAGGATCTGGTGCCCAGGTCACCTCAGCTGGAGAAATCCAGAATCCGCCTACGGAGAACACTGAGGAACCTTGGTGGAGGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS CCA 90 bp | AGTGACAGGTGTTTCGCAGCTGAGCCCTTGAGGAGATTCTCCAGTTaGGCAGAGACATCCCTTCCTCAGACGCCTTGTGGGCTGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: SDRCFAAEPLRRFSS*AETSLPQTPCGLDS Trigger: GGAGTCCAGCCCACAAGGCGTCTGAGGAAGGGATGTCTCTGCCCAACTGGAGAATCTCCTCAAGGGCTCAGCTGCGAAACACCTGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS TCA 90 bp | CAGTTCAAAGTGAGGGGAGGGCTCCCAACAGGCCGGGAAGACAGTTaGCTTCACCCTCCTTGGGTTTGTCTGTCTGTCCGTCTCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: QFKVRGGLPTGREDS*LHPPWVCLSVRLWE Trigger: TTCCCAGAGACGGACAGACAGACAAACCCAAGGAGGGTGAAGTCAACTGTCTTCCCGGCCTGTTGGGAGCCCTCCCCTCACTTTGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS GCA 90 bp | AATTCTCCGTCTGTAGGTAATGGAGAGAATGCTGTCTGTGATCTCTaGCTCCTCTGCCTCAGGATGGGGCAAGGTGGGTTGCTAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: NSPSVGNGENAVCDL*LLCLRMGQGGLLGS Trigger: GGAACCTAGCAACCCACCTTGCCCCATCCTGAGGCAGAGGAGGCAGAGATCACAGACAGCATTCTCTCCATTACCTACAGACGGAGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 90 bp | CCTGCATCAGGGGCCTCTTGCGGCATTAGAGATGGGGGTGTTCTCTaGTTTCTAGTCCTCTCAACCCATCAAGGTGGATGTGGATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PASGASCGIRDGGVL*FLVLSTHQGGCGFR Trigger: TCTGAATCCACATCCACCTTGATGGGTTGAGAGGACTAGAAACCAGAGAACACCCCCATCTCTAATGCCGCAAGAGGCCCCTGATGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS GCA 90 bp | CATGGAGCCTTCTTATTCCTGCAAGATCCTGCATCAGGGGCCTCTTaGGGCATTAGAGATGGGGGTGTTCTCTGGTTTCTAGTCCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HGAFLFLQDPASGAS*GIRDGGVLWFLVLS Trigger: TGAGAGGACTAGAAACCAGAGAACACCCCCATCTCTAATGCCGCAAGAGGCCCCTGATGCAGGATCTTGCAGGAATAAGAAGGCTCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS TCA 90 bp | CCATCAAGGTGGATGTGGATTCAGATCCCGAGGGCTGTCTTGTCATaGTCACCACAATTGTCCCTCGCAGCTTCTCTGCGCTTTAATTCT | + |
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Preference number: 5 (lower is better) Translates to: PSRWMWIQIPRAVLS*SPQLSLAASLRFNS Trigger: AGAATTAAAGCGCAGAGAAGCTGCGAGGGACAATTGTGGTGATCATGACAAGACAGCCCTCGGGATCTGAATCCACATCCACCTTGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 90 bp | CCTTGGTTTTCTCATCGTCCTGCCTCAGGGCCTGGGCTCCATACCTaGGGAGTAGACAGTCTTCTACTTTCTAAAAAGCTGGACTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PWFSHRPASGPGLHT*GVDSLLLSKKLDLK Trigger: TTTCAAGTCCAGCTTTTTAGAAAGTAGAAGACTGTCTACTCCCCAGGTATGGAGCCCAGGCCCTGAGGCAGGACGATGAGAAAACCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425505.1 |
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| CDS CCA 90 bp | GAAGCAGCTTGTAGTGAGTGGAGTCAAGAAAGCAGTGTTTGCGTCTaGTCTGCCCCTTTCCAGCTTTCAGTGCCTTGGTTTTCTCATCGT | + |
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Preference number: 5 (lower is better) Translates to: EAACSEWSQESSVCV*SAPFQLSVPWFSHR Trigger: ACGATGAGAAAACCAAGGCACTGAAAGCTGGAAAGGGGCAGACCAGACGCAAACACTGCTTTCTTGACTCCACTCACTACAAGCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425505.1 |
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| CDS CCA 90 bp | GAAGCAGCTTGTAGTGAGTGGAGTCAAGAAAGCAGTGTTTGCGTCTaGTCTGCCCCTTTCCAGCTTTCAGTGCCTTGGTTTTCTCATCTG | + |
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Preference number: 5 (lower is better) Translates to: EAACSEWSQESSVCV*SAPFQLSVPWFSHL Trigger: CAGATGAGAAAACCAAGGCACTGAAAGCTGGAAAGGGGCAGACCAGACGCAAACACTGCTTTCTTGACTCCACTCACTACAAGCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS GCA 90 bp | CTTAAGGAAGCAGCTTGTAGTGAGTGGAGTCAAGAAAGCAGTGTTTaGGTCTGGTCTGCCCCTTTCCAGCTTTCAGTGCCTTGGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LKEAACSEWSQESSV*VWSAPFQLSVPWFS Trigger: AGAAAACCAAGGCACTGAAAGCTGGAAAGGGGCAGACCAGACGCAAACACTGCTTTCTTGACTCCACTCACTACAAGCTGCTTCCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CAA 90 bp | GGGCAGAGACATCCCTTCCTCAGACGCCTTGTGGGCTGGACTCCTTaGGCCCAGTTCAAAGTGAGGGGAGGGCTCCCAACAGGCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: GQRHPFLRRLVGWTP*AQFKVRGGLPTGRE Trigger: TTCCCGGCCTGTTGGGAGCCCTCCCCTCACTTTGAACTGGGCCAAAGGAGTCCAGCCCACAAGGCGTCTGAGGAAGGGATGTCTCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS GCA 72 bp | GGCCTCTTGGGAAAGGAGAGAGTGCTGACTTGCCCATaGCCCCCGCCTTCCCCAGGGATGGAGCAATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLLGKERVLTCP*PPPSPGMEQLE Trigger: CTCCAATTGCTCCATCCCTGGGGAAGGCGGGGGGCATGGGCAAGTCAGCACTCTCTCCTTTCCCAAGAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS CCA 72 bp | GGGCAGAGACATCCCTTCCTCAGACGCCTTGTGGGCTaGACTCCTTTGGCCCAGTTCAAAGTGAGGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GQRHPFLRRLVG*TPLAQFKVRGG Trigger: CCCTCCCCTCACTTTGAACTGGGCCAAAGGAGTCCAGCCCACAAGGCGTCTGAGGAAGGGATGTCTCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS TCA 72 bp | GTGAGGGGAGGGCTCCCAACAGGCCGGGAAGACAGTTaGCTTCACCCTCCTTGGGTTTGTCTGTCTGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: VRGGLPTGREDS*LHPPWVCLSVR Trigger: ACGGACAGACAGACAAACCCAAGGAGGGTGAAGTCAACTGTCTTCCCGGCCTGTTGGGAGCCCTCCCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CAA 72 bp | TTGCGTCTGGTCTGCCCCTTTCCAGCTTTCAGTGCCTaGGTTTTCTCATCGTCCTGCCTCAGGGCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LRLVCPFPAFSA*VFSSSCLRAWA Trigger: AGCCCAGGCCCTGAGGCAGGACGATGAGAAAACCAAGGCACTGAAAGCTGGAAAGGGGCAGACCAGACGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425505.1 |
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| CDS CCA 72 bp | TGTTTCGCAGCTGAGCCCTTGAGGAGATTCTCCAGTTaGGCAGAGACATCCCTTCCTCAGACGCCTTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CFAAEPLRRFSS*AETSLPQTPCG Trigger: CCCACAAGGCGTCTGAGGAAGGGATGTCTCTGCCCAACTGGAGAATCTCCTCAAGGGCTCAGCTGCGAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CAA 72 bp | AGGCCGGGAAGACAGTTGACTTCACCCTCCTTGGGTTaGTCTGTCTGTCCGTCTCTGGGAATGGTCGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RPGRQLTSPSLG*SVCPSLGMVAS Trigger: GGAAGCGACCATTCCCAGAGACGGACAGACAGACAAACCCAAGGAGGGTGAAGTCAACTGTCTTCCCGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CAA 72 bp | AGGGACCCAAGTCCCTGTCCCATCTTGAGGTGGTTCTaGTGCTTGAGTGGGGATAGATGGAGACCCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RDPSPCPILRWF*CLSGDRWRPPA Trigger: TGCTGGGGGTCTCCATCTATCCCCACTCAAGCACAAGAACCACCTCAAGATGGGACAGGGACTTGGGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS CCA 72 bp | AGTGCCTTGGTTTTCTCATCGTCCTGCCTCAGGGCCTaGGCTCCATACCTGGGGAGTAGACAGTCTTCTACT | + |
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Preference number: 6 (lower is better) Translates to: SALVFSSSCLRA*APYLGSRQSST Trigger: AGTAGAAGACTGTCTACTCCCCAGGTATGGAGCCCAGGCCCTGAGGCAGGACGATGAGAAAACCAAGGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425505.1 |
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| CDS CCA 72 bp | TTGATCAGTGGGGTGACTGGGAGAGTTAACGTATCATaGCTCCTCTCTGCTCCTGCCTCGTCCCGTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LISGVTGRVNVS*LLSAPASSRSM Trigger: CATGGAACGGGACGAGGCAGGAGCAGAGAGGAGCCATGATACGTTAACTCTCCCAGTCACCCCACTGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 72 bp | CACCAAGGTTCCTCAGTGTTCTCCGTAGGCGGATTCTaGATTTCTCCAGCTGAGGTGACCTGGGCACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HQGSSVFSVGGF*ISPAEVTWAPD Trigger: ATCTGGTGCCCAGGTCACCTCAGCTGGAGAAATCCAGAATCCGCCTACGGAGAACACTGAGGAACCTTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS CAA 72 bp | CAAAGCCGATGGAGGGACCCAAGTCCCTGTCCCATCTaGAGGTGGTTCTTGTGCTTGAGTGGGGATAGATGG | + |
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Preference number: 6 (lower is better) Translates to: QSRWRDPSPCPI*RWFLCLSGDRW Trigger: CCATCTATCCCCACTCAAGCACAAGAACCACCTCAAGATGGGACAGGGACTTGGGTCCCTCCATCGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445873.5 |
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| CDS TCA 72 bp | TGGATGTGGATTCAGATCCCGAGGGCTGTCTTGTCATaGTCACCACAATTGTCCCTCGCAGCTTCTCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: WMWIQIPRAVLS*SPQLSLAASLR Trigger: GCGCAGAGAAGCTGCGAGGGACAATTGTGGTGATCATGACAAGACAGCCCTCGGGATCTGAATCCACATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 72 bp | TCTCATCGTCCTGCCTCAGGGCCTGGGCTCCATACCTaGGGAGTAGACAGTCTTCTACTTTCTAAAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SHRPASGPGLHT*GVDSLLLSKKL Trigger: CAGCTTTTTAGAAAGTAGAAGACTGTCTACTCCCCAGGTATGGAGCCCAGGCCCTGAGGCAGGACGATGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425505.1 |
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| CDS GCA 72 bp | TTCTTATTCCTGCAAGATCCTGCATCAGGGGCCTCTTaGGGCATTAGAGATGGGGGTGTTCTCTGGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: FLFLQDPASGAS*GIRDGGVLWFL Trigger: TAGAAACCAGAGAACACCCCCATCTCTAATGCCGCAAGAGGCCCCTGATGCAGGATCTTGCAGGAATAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 72 bp | TGTAGTGAGTGGAGTCAAGAAAGCAGTGTTTGCGTCTaGTCTGCCCCTTTCCAGCTTTCAGTGCCTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: CSEWSQESSVCV*SAPFQLSVPWF Trigger: AAACCAAGGCACTGAAAGCTGGAAAGGGGCAGACCAGACGCAAACACTGCTTTCTTGACTCCACTCACTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CCA 72 bp | TGTTCTCTGGTTTCTAGTCCTCTCAACCCATCAAGGTaGATGTGGATTCAGATCCCGAGGGCTGTCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: CSLVSSPLNPSR*MWIQIPRAVLS Trigger: TGACAAGACAGCCCTCGGGATCTGAATCCACATCCACCTTGATGGGTTGAGAGGACTAGAAACCAGAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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| CDS CAA 72 bp | CAGCACAAGGAACCAGAATCCTCAAGTCTTAAGGTTTaGATCAGTGGGGTGACTGGGAGAGTTAACGTATCA | + |
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Preference number: 6 (lower is better) Translates to: QHKEPESSSLKV*ISGVTGRVNVS Trigger: TGATACGTTAACTCTCCCAGTCACCCCACTGATCAAAACCTTAAGACTTGAGGATTCTGGTTCCTTGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425505.1 ENST00000445873.5 |
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