RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLR6 (Homo sapiens)

Ensembl gene IDs: ENSG00000174130

Ensembl transcript IDs: ENST00000381950.1, ENST00000436693.6, ENST00000508254.5, ENST00000514655.1, ENST00000610323.2

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGTCCTGCTAAACCTGGAGCCGGGTCGCCCCAGCATCTTCCAGTaGCAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGC +
Preference number: 1 (lower is better)
Translates to: SVLLNLEPGRPSIFQ*QMGRSSTHREGVHG
Trigger: GCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTGCCACTGGAAGATGCTGGGGCGACCCGGCTCCAGGTTTAGCAGGACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 90 bp CCAAGAATTCTCAAGCCACACCACATCTGCTGCACTGAACCTGTGTaGTCCTGTTACTCTGCAAGCTTTCAGTCTTGGAGTGGGATGCCA +
Preference number: 1 (lower is better)
Translates to: PRILKPHHICCTEPV*SCYSASFQSWSGMP
Trigger: TGGCATCCCACTCCAAGACTGAAAGCTTGCAGAGTAACAGGAGCACACAGGTTCAGTGCAGCAGATGTGGTGTGGCTTGAGAATTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 90 bp AGGACTTCATGGACATTTCCCGCATGGGACCGTTTCAGAGTCATTTaGTCATCCCACGAGTTTTTACTGCGCATCTACAATGGGGTGCAC +
Preference number: 1 (lower is better)
Translates to: RTSWTFPAWDRFRVI*SSHEFLLRIYNGVH
Trigger: GTGCACCCCATTGTAGATGCGCAGTAAAAACTCGTGGGATGAGCAAATGACTCTGAAACGGTCCCATGCGGGAAATGTCCATGAAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 90 bp CACTGGGGAGAGGCAGGGAACAGGTGGAGAAGTCTCCCTTTTTCCTaGAGCTTAGACTTCAGAGGAGAGAAGAAGAAGATGAGTAAGCAA +
Preference number: 1 (lower is better)
Translates to: HWGEAGNRWRSLPFS*SLDFRGEKKKMSKQ
Trigger: TTGCTTACTCATCTTCTTCTTCTCTCCTCTGAAGTCTAAGCTCCAGGAAAAAGGGAGACTTCTCCACCTGTTCCCTGCCTCTCCCCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 90 bp AGCTTTCAGTCTTGGAGTGGGATGCCAGGCTACCTTCTACCATGCTaGGTCCCTCACACTTGTCTGCAAGAAATTCAAAGCAATCTCCCT +
Preference number: 1 (lower is better)
Translates to: SFQSWSGMPGYLLPC*VPHTCLQEIQSNLP
Trigger: AGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGCATGGTAGAAGGTAGCCTGGCATCCCACTCCAAGACTGAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 90 bp CACTTGTATTTGCCAAACACTATTTACCAGTCTCTGTGTTCCCAGTaGCCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAG +
Preference number: 1 (lower is better)
Translates to: HLYLPNTIYQSLCSQ*PPSDSSKHSSSSSK
Trigger: CTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGGGCACTGGGAACACAGAGACTGGTAAATAGTGTTTGGCAAATACAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 90 bp AACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCACACCACATCTaGTGCACTGAACCTGTGTGCTCCTGTTACTCTGCAAGCTTTCAG +
Preference number: 1 (lower is better)
Translates to: NTHQALPRILKPHHI*CTEPVCSCYSASFQ
Trigger: CTGAAAGCTTGCAGAGTAACAGGAGCACACAGGTTCAGTGCAGCAGATGTGGTGTGGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 90 bp TGTCCTCTTACTGCTATAGTTTCTTTGCACAACAGGCTACCCTGTTaGCTGATATCCCGTCATGACAATGCAAGCCCAGCTACTCTTCCA +
Preference number: 1 (lower is better)
Translates to: CPLTAIVSLHNRLPC*LISRHDNASPATLP
Trigger: TGGAAGAGTAGCTGGGCTTGCATTGTCATGACGGGATATCAGCCAACAGGGTAGCCTGTTGTGCAAAGAAACTATAGCAGTAAGAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 90 bp GGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATaGAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAA +
Preference number: 1 (lower is better)
Translates to: GLVHMMLKLTVPLLP*SHINSCSQQNPFGK
Trigger: TTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR GCA 90 bp AAGAAATTCACATCCTTTTACCATGTCAATAATGGGAGGGCAGGTTaGTATCAGTGCTTCTCTTCTCTCATCCTGCCATTTTGGGTGCTC +
Preference number: 1 (lower is better)
Translates to: KKFTSFYHVNNGRAG*YQCFSSLILPFWVL
Trigger: GAGCACCCAAAATGGCAGGATGAGAGAAGAGAAGCACTGATAGCAACCTGCCCTCCCATTATTGACATGGTAAAAGGATGTGAATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 90 bp CTTCTAGAGATGGATAATACGGACTGGGAGTCATTGGTCTCTTTCTaGTCTTTTGATAAGTCCAGACTGGCTGTGTCTAGTATCATGTTG +
Preference number: 1 (lower is better)
Translates to: LLEMDNTDWESLVSF*SFDKSRLAVSSIML
Trigger: CAACATGATACTAGACACAGCCAGTCTGGACTTATCAAAAGAGCAGAAAGAGACCAATGACTCCCAGTCCGTATTATCCATCTCTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 90 bp GTCCCATTCAATATCCAGCTGCAAATAAATTTGGCCGAGTTTTCTTaGAAAGCAGGTGGATCCACGTCTTTCACCTCAACAGCTTATGAT +
Preference number: 1 (lower is better)
Translates to: VPFNIQLQINLAEFS*KAGGSTSFTSTAYD
Trigger: ATCATAAGCTGTTGAGGTGAAAGACGTGGATCCACCTGCTTTCCAAGAAAACTCGGCCAAATTTATTTGCAGCTGGATATTGAATGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 90 bp CTCACACCTCATTCAAAAATCTGCTTGGCCTTCCTTGCAGTGAAATaGCGAAGGCATATAGTCAGTTTCTTTACTCTTCCTCCATTGTCT +
Preference number: 1 (lower is better)
Translates to: LTPHSKICLAFLAVK*RRHIVSFFTLPPLS
Trigger: AGACAATGGAGGAAGAGTAAAGAAACTGACTATATGCCTTCGTCATTTCACTGCAAGGAAGGCCAAGCAGATTTTTGAATGAGGTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 90 bp TTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGGAGCTaGAAAACTGAGCATTTACTCAAAAGAGACTGTTTCAATTTGAAA +
Preference number: 1 (lower is better)
Translates to: LLTTESIWESRVERS*KTEHLLKRDCFNLK
Trigger: TTTCAAATTGAAACAGTCTCTTTTGAGTAAATGCTCAGTTTTTCAGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR TCA 90 bp TTCTTGGAAAGCAGGTGGATCCACGTCTTTCACCTCAACAGCTTATaGTTAAGTCCATATATCCCTTTACATACATACACTATCAAGTCA +
Preference number: 1 (lower is better)
Translates to: FLESRWIHVFHLNSL*LSPYIPLHTYTIKS
Trigger: TGACTTGATAGTGTATGTATGTAAAGGGATATATGGACTTAATCATAAGCTGTTGAGGTGAAAGACGTGGATCCACCTGCTTTCCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 90 bp GGAGCTGAAAAACTGAGCATTTACTCAAAAGAGACTGTTTCAATTTaGAACATAATGATTAAACCAGAAGAGACTGGGCTGTCTCTAACT +
Preference number: 1 (lower is better)
Translates to: GAEKLSIYSKETVSI*NIMIKPEETGLSLT
Trigger: AGTTAGAGACAGCCCAGTCTCTTCTGGTTTAATCATTATGTTTCAAATTGAAACAGTCTCTTTTGAGTAAATGCTCAGTTTTTCAGCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR-3UTR TCA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGCCTGTAGTTAACTATTaGATAAGGCAGACAGGCCAG +
Preference number: 2 (lower is better)
Translates to: QMGRSSTHREGVHGQGRAPVVNY*IRQTGQ
Trigger: CTGGCCTGTCTGCCTTATTCAATAGTTAACTACAGG...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CCA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGATCACTCCTGAATCTTaGGCAGATACCATAAATTTT +
Preference number: 2 (lower is better)
Translates to: QMGRSSTHREGVHGQGRAITPES*ADTINF
Trigger: AAAATTTATGGTATCTGCCCAAGATTCAGGAGTGAT...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR GCA 90 bp ACAGGCCAGCATGATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTCCTGCCATTTTGGGTaGTCAAGCCAACCTTTCACC +
Preference number: 2 (lower is better)
Translates to: TGQHDPASCYGRVQMLAFSCHFG*SSQPFT
Trigger: GGTGAAAGGTTGGCTTGAGCACCCAAAATGGCAGGA...AAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGATCATGCTGGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR TCA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGTTGTTAAGTCTTTCCTaGAGGCATGAGGATAATGGA +
Preference number: 2 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMLLSLS*RHEDNG
Trigger: TCCATTATCCTCATGCCTTCAGGAAAGACTTAACAA...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR-3UTR TCA 90 bp ATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTCATAGGGCACATCCACATCTGCTGCACTaGACCTGTGTGCTCCTGTTA +
Preference number: 2 (lower is better)
Translates to: ILPAAMAESKCWLFHRAHPHLLH*TCVLLL
Trigger: TAACAGGAGCACACAGGTTCAGTGCAGCAGATGTGG...ATGTGCCCTATGAAAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 90 bp GAGTGGGATGCCAGGCTACCTTCTACCATGCTGAGTCCCTCACACTaGTCTGCAAGAAATTCAAAGCAATCTCCCTATGGCCTAGAACCT +
Preference number: 2 (lower is better)
Translates to: EWDARLPSTMLSPSH*SARNSKQSPYGLEP
Trigger: AGGTTCTAGGCCATAGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGCATGGTAGAAGGTAGCCTGGCATCCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 90 bp CAGGACTTCATGGACATTTCCCGCATGGGACCGTTTCAGAGTCATTaGCTCATCCCACGAGTTTTTACTGCGCATCTACAATGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: QDFMDISRMGPFQSH*LIPRVFTAHLQWGA
Trigger: TGCACCCCATTGTAGATGCGCAGTAAAAACTCGTGGGATGAGCAAATGACTCTGAAACGGTCCCATGCGGGAAATGTCCATGAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR GCA 90 bp CTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCACACCTGCACTGAACCTGTGTaGTCCTGTTACTCTGCAAGC +
Preference number: 2 (lower is better)
Translates to: LGLQQTLIKLFQEFSSHTCTEPV*SCYSAS
Trigger: GCTTGCAGAGTAACAGGAGCACACAGGTTCAGTGCA...GGTGTGGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CCA 90 bp ACAGGCCAGCATGATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTTTGGGAAAGCAGAGTaGAGAGGAGCTGAAAAACTG +
Preference number: 2 (lower is better)
Translates to: TGQHDPASCYGRVQMLAFFGKAE*RGAEKL
Trigger: CAGTTTTTCAGCTCCTCTCCACTCTGCTTTCCCAAA...AAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGATCATGCTGGCCTGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR TCA 90 bp TGCAGTGAAATGACGAAGGCATATAGTCAGTTTCTTTACTCTTCCTCCATTGTCGCAGACAGGCCAGCATaGTCCTGCCAGCTGCTATGG +
Preference number: 2 (lower is better)
Translates to: CSEMTKAYSQFLYSSSIVADRPA*SCQLLW
Trigger: CCATAGCAGCTGGCAGGATCATGCTGGCCTGTCTGC...GACAATGGAGGAAGAGTAAAGAAACTGACTATATGCCTTCGTCATTTCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CCA 90 bp ATCAAGCTCTTCCAAGAATTCTCAAGCCACACCACATCTGCTGCACTGAACCTGTTCTTGGAAAGCAGGTaGATCCACGTCTTTCACCTC +
Preference number: 2 (lower is better)
Translates to: IKLFQEFSSHTTSAALNLFLESR*IHVFHL
Trigger: GAGGTGAAAGACGTGGATCCACCTGCTTTCCAAGAA...CAGGTTCAGTGCAGCAGATGTGGTGTGGCTTGAGAATTCTTGGAAGAGCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR GCA 90 bp CATTGTCTCTGTCTTCTCTATATTCTAGATGTCCCTATGCCATTGCAAGGGAAGAAGCCACACCACATCTaGTGCACTGAACCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: HCLCLLYILDVPMPLQGKKPHHI*CTEPVC
Trigger: GCACACAGGTTCAGTGCAGCAGATGTGGTGTGGCTT...CTTCCCTTGCAATGGCATAGGGACATCTAGAATATAGAGAAGACAGAGACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR TCA 90 bp CTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCACACCTTGTTAAGTCTTTCCTaGAGGCATGAGGATAATGGA +
Preference number: 2 (lower is better)
Translates to: LGLQQTLIKLFQEFSSHTLLSLS*RHEDNG
Trigger: TCCATTATCCTCATGCCTTCAGGAAAGACTTAACAA...GGTGTGGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR TCA 90 bp CCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAGGAGCTGAAAAACTaGGCATTTACTCAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: PKDQYDSQGTPRTGAYDAEELKN*AFTQKR
Trigger: TCTCTTTTGAGTAAATGCTCAGTTTTTCAGCTCCTC...AGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR CAA 90 bp AGATGGATAATACGGACTGGGAGTCATTGGTCTCTTTCTGCTCTTTaGATAAGTCCAGACTGGCTGTGTCTAGTATCATGTTGGTGCAGT +
Preference number: 2 (lower is better)
Translates to: RWIIRTGSHWSLSAL*ISPDWLCLVSCWCS
Trigger: ACTGCACCAACATGATACTAGACACAGCCAGTCTGGACTTATCAAAAGAGCAGAAAGAGACCAATGACTCCCAGTCCGTATTATCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR TCA 90 bp GACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGCTCAGTTCCCCAGATaGAACATTGTTTTTGTTAAG +
Preference number: 2 (lower is better)
Translates to: DQYDSQGTPRTGAYDAEVAQFPR*NIVFVK
Trigger: CTTAACAAAAACAATGTTTCATCTGGGGAACTGAGC...AACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR-3UTR TCA 90 bp GCTGAGTCCCTCACACTTGTCTGCAAGAAATTCAAAGCAATCTCCCTATGGCCTCACCTCAACAGCTTATaGTTAAGTCCATATATCCCT +
Preference number: 2 (lower is better)
Translates to: AESLTLVCKKFKAISLWPHLNSL*LSPYIP
Trigger: AGGGATATATGGACTTAATCATAAGCTGTTGAGGTG...AGGCCATAGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR GCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCAGCCATATAAACTCTTaGTCACAACAGAATCCATTT +
Preference number: 2 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSSHINS*SQQNPF
Trigger: AAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR CAA 90 bp TTTGACTCTAGTCTTCTAGAGATGGATAATACGGACTGGGAGTCATaGGTCTCTTTCTGCTCTTTTGATAAGTCCAGACTGGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: FDSSLLEMDNTDWES*VSFCSFDKSRLAVS
Trigger: AGACACAGCCAGTCTGGACTTATCAAAAGAGCAGAAAGAGACCAATGACTCCCAGTCCGTATTATCCATCTCTAGAAGACTAGAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR TCA 90 bp CATCAAGCACTTGTATTTGCCAAACACTATTTACCAGTCTCTGTGTTCCCAGTGGCTCAGTTCCCCAGATaGAACATTGTTTTTGTTAAG +
Preference number: 2 (lower is better)
Translates to: HQALVFAKHYLPVSVFPVAQFPR*NIVFVK
Trigger: CTTAACAAAAACAATGTTTCATCTGGGGAACTGAGC...CACTGGGAACACAGAGACTGGTAAATAGTGTTTGGCAAATACAAGTGCTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CAA 90 bp ACTGCGGCGGGGACGAGCGGCCAGGAGGCAGCTCAGCGTGGAACTGTAGCCCCGTCTCATCCTGCCATTTaGGGTGCTCAAGCCAACCTT +
Preference number: 3 (lower is better)
Translates to: TAAGTSGQEAAQRGTVAPSHPAI*GAQANL
Trigger: AAGGTTGGCTTGAGCACCCAAAATGGCAGGATGAGA...CGGGGCTACAGTTCCACGCTGAGCTGCCTCCTGGCCGCTCGTCCCCGCCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 72 bp TCCATGATGCAGGGCCACATTATCTGGCTGACCTCTTaGAGCAACCTCCACCCCAAACCCCTCTTCTGCCTA +
Preference number: 3 (lower is better)
Translates to: SMMQGHIIWLTS*SNLHPKPLFCL
Trigger: TAGGCAGAAGAGGGGTTTGGGGTGGAGGTTGCTGCAAGAGGTCAGCCAGATAATGTGGCCCTGCATCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 72 bp GTGCTCCTGTTACTCTGCAAGCTTTCAGTCTTGGAGTaGGATGCCAGGCTACCTTCTACCATGCTGAGTCCC +
Preference number: 3 (lower is better)
Translates to: VLLLLCKLSVLE*DARLPSTMLSP
Trigger: GGGACTCAGCATGGTAGAAGGTAGCCTGGCATCCCACTCCAAGACTGAAAGCTTGCAGAGTAACAGGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 72 bp ACATTGCACAGTTCCATGATGCAGGGCCACATTATCTaGCTGACCTCTTGCAGCAACCTCCACCCCAAACCC +
Preference number: 3 (lower is better)
Translates to: TLHSSMMQGHII*LTSCSNLHPKP
Trigger: GGGTTTGGGGTGGAGGTTGCTGCAAGAGGTCAGCCAGATAATGTGGCCCTGCATCATGGAACTGTGCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 72 bp CCTGTTACTCTGCAAGCTTTCAGTCTTGGAGTGGGATaGCAGGCTACCTTCTACCATGCTGAGTCCCTCACA +
Preference number: 3 (lower is better)
Translates to: PVTLQAFSLGVG*QATFYHAESLT
Trigger: TGTGAGGGACTCAGCATGGTAGAAGGTAGCCTGGCATCCCACTCCAAGACTGAAAGCTTGCAGAGTAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 72 bp CTCAAGCCACACCACATCTGCTGCACTGAACCTGTGTaGTCCTGTTACTCTGCAAGCTTTCAGTCTTGGAGT +
Preference number: 3 (lower is better)
Translates to: LKPHHICCTEPV*SCYSASFQSWS
Trigger: ACTCCAAGACTGAAAGCTTGCAGAGTAACAGGAGCACACAGGTTCAGTGCAGCAGATGTGGTGTGGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CAA 90 bp ACAGGCCAGCATGATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTACTGCTATAGTTTCTTaGCACAACAGGCTACCCTGT +
Preference number: 3 (lower is better)
Translates to: TGQHDPASCYGRVQMLAFTAIVS*HNRLPC
Trigger: ACAGGGTAGCCTGTTGTGCAAAGAAACTATAGCAGT...AAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGATCATGCTGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 72 bp TCTTGGAGTGGGATGCCAGGCTACCTTCTACCATGCTaGGTCCCTCACACTTGTCTGCAAGAAATTCAAAGC +
Preference number: 3 (lower is better)
Translates to: SWSGMPGYLLPC*VPHTCLQEIQS
Trigger: GCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGCATGGTAGAAGGTAGCCTGGCATCCCACTCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR GCA 72 bp CAAGCTCTTCCAAGAATTCTCAAGCCACACCACATCTaGTGCACTGAACCTGTGTGCTCCTGTTACTCTGCA +
Preference number: 3 (lower is better)
Translates to: QALPRILKPHHI*CTEPVCSCYSA
Trigger: TGCAGAGTAACAGGAGCACACAGGTTCAGTGCAGCAGATGTGGTGTGGCTTGAGAATTCTTGGAAGAGCTTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CAA 90 bp GACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTCACAACAGAATCCATTaGGGAAAGCAGAGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: DQYDSQGTPRTGAYDAEVHNRIH*GKQSGE
Trigger: CTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTG...AACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR-3UTR CAA 90 bp CCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCGTGTCTAGTATCATGTaGGTGCAGTTACTGTCTTTC +
Preference number: 3 (lower is better)
Translates to: PPSDSSKHSSSSSKNSQAVSSIM*VQLLSF
Trigger: GAAAGACAGTAACTGCACCAACATGATACTAGACAC...GGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CAA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCTCCCCAGATGAAACATaGTTTTTGTTAAGTCTTTCC +
Preference number: 3 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSSPDET*FLLSLS
Trigger: GGAAAGACTTAACAAAAACAATGTTTCATCTGGGGA...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR-3UTR CAA 90 bp CATCAAGCACTTGTATTTGCCAAACACTATTTACCAGTCTCTGTGTTCCCAGTGCATATGATGCTGAAGTaGACTGTTCCCTTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: HQALVFAKHYLPVSVFPVHMMLK*TVPLLP
Trigger: TGGCAGCAAGGGAACAGTCAACTTCAGCATCATATG...CACTGGGAACACAGAGACTGGTAAATAGTGTTTGGCAAATACAAGTGCTTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 72 bp TTGATAAGTCCAGACTGGCTGTGTCTAGTATCATGTTaGTGCAGTTACTGTCTTTCGTCAGCTTTGAGCCTT +
Preference number: 3 (lower is better)
Translates to: LISPDWLCLVSC*CSYCLSSALSL
Trigger: AAGGCTCAAAGCTGACGAAAGACAGTAACTGCACCAACATGATACTAGACACAGCCAGTCTGGACTTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR-3UTR CAA 90 bp CATTGTCTCTGTCTTCTCTATATTCTAGATGTCCCTATGCCATTGCAAGGGAAGCTGAGTCCCTCACACTaGTCTGCAAGAAATTCAAAG +
Preference number: 3 (lower is better)
Translates to: HCLCLLYILDVPMPLQGKLSPSH*SARNSK
Trigger: CTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAG...CTTCCCTTGCAATGGCATAGGGACATCTAGAATATAGAGAAGACAGAGACAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 72 bp CATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATaGAGCCATATAAACTCTTGCTCACAACAGAATCCA +
Preference number: 3 (lower is better)
Translates to: HMMLKLTVPLLP*SHINSCSQQNP
Trigger: TGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR CCA 72 bp CATTGGTCTCTTTCTGCTCTTTTGATAAGTCCAGACTaGCTGTGTCTAGTATCATGTTGGTGCAGTTACTGT +
Preference number: 3 (lower is better)
Translates to: HWSLSALLISPD*LCLVSCWCSYC
Trigger: ACAGTAACTGCACCAACATGATACTAGACACAGCCAGTCTGGACTTATCAAAAGAGCAGAAAGAGACCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 72 bp ACAGAATCCATTTGGGAAAGCAGAGTGGAGAGGAGCTaGAAAACTGAGCATTTACTCAAAAGAGACTGTTTC +
Preference number: 3 (lower is better)
Translates to: TESIWESRVERS*KTEHLLKRDCF
Trigger: GAAACAGTCTCTTTTGAGTAAATGCTCAGTTTTTCAGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR GCA 72 bp TCTCACACCTCATTCAAAAATCTGCTTGGCCTTCCTTaGAGTGAAATGACGAAGGCATATAGTCAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: SHTSFKNLLGLP*SEMTKAYSQFL
Trigger: AAGAAACTGACTATATGCCTTCGTCATTTCACTGCAAGGAAGGCCAAGCAGATTTTTGAATGAGGTGTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CCA 72 bp TCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTaGAGAGGAGCTGAAAAACTGAGCATTTACTCAAAA +
Preference number: 3 (lower is better)
Translates to: SCSQQNPFGKAE*RGAEKLSIYSK
Trigger: TTTTGAGTAAATGCTCAGTTTTTCAGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR CCA 72 bp TCTGTTGGATCTCCTCCCATCATCACTCCTGAATCTTaGGCAGATACCATAAATTTTAGTGACAAATCTCAC +
Preference number: 3 (lower is better)
Translates to: SVGSPPIITPES*ADTINFSDKSH
Trigger: GTGAGATTTGTCACTAAAATTTATGGTATCTGCCCAAGATTCAGGAGTGATGATGGGAGGAGATCCAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 72 bp AGCAGGTGGATCCACGTCTTTCACCTCAACAGCTTATaGTTAAGTCCATATATCCCTTTACATACATACACT +
Preference number: 3 (lower is better)
Translates to: SRWIHVFHLNSL*LSPYIPLHTYT
Trigger: AGTGTATGTATGTAAAGGGATATATGGACTTAATCATAAGCTGTTGAGGTGAAAGACGTGGATCCACCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR TCA 72 bp TGCAAGCCCAGCTACTCTTCCATAGTCAAAGCCATGTaGAGAAATTCACATCCTTTTACCATGTCAATAATG +
Preference number: 3 (lower is better)
Translates to: CKPSYSSIVKAM*RNSHPFTMSIM
Trigger: CATTATTGACATGGTAAAAGGATGTGAATTTCTTCACATGGCTTTGACTATGGAAGAGTAGCTGGGCTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp ACTGCGGCGGGGACGAGCGGCCAGGAGGCAGCTCAGCGTGGAACTGTAGCCCCGCTCATCCTGCCATTTTaGGTGCTCAAGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: TAAGTSGQEAAQRGTVAPLILPF*VLKPTF
Trigger: AAAGGTTGGCTTGAGCACCCAAAATGGCAGGATGAG...CGGGGCTACAGTTCCACGCTGAGCTGCCTCCTGGCCGCTCGTCCCCGCCGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGCACCTCAACAGCTTATaGTTAAGTCCATATATCCCT +
Preference number: 4 (lower is better)
Translates to: QMGRSSTHREGVHGQGRAHLNSL*LSPYIP
Trigger: AGGGATATATGGACTTAATCATAAGCTGTTGAGGTG...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGACATATCTAAGACTTTaGTTTTCAGCGGTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QMGRSSTHREGVHGQGRATYLRL*FSAVGL
Trigger: AAGACCTACCGCTGAAAACCAAAGTCTTAGATATGT...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATAAAGGGCAATGGGCCCCGTaGGACGAGGTGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GAYDAEVDCSLAAMKPYKGQWAP*DEVQGR
Trigger: GCGGCCCTGCACCTCGTCCCACGGGGCCCATTGCCC...TTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGTCCTGCCATTTTGGGTaGTCAAGCCAACCTTTCACC +
Preference number: 4 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMSCHFG*SSQPFT
Trigger: GGTGAAAGGTTGGCTTGAGCACCCAAAATGGCAGGA...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CATTGTCTCTGTCTTCTCTATATTCTAGATGTCCCTATGCCATTGCAAGGGAAGGGTGCAGGGCCGCTGTaGGGCGGGCAGGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HCLCLLYILDVPMPLQGKGAGPL*GGQVRH
Trigger: GTGCCTCACCTGCCCGCCCCACAGCGGCCCTGCACC...CTTCCCTTGCAATGGCATAGGGACATCTAGAATATAGAGAAGACAGAGACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 72 bp TTCCATGATGCAGGGCCACATTATCTGGCTGACCTCTaGCAGCAACCTCCACCCCAAACCCCTCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FHDAGPHYLADL*QQPPPQTPLLP
Trigger: AGGCAGAAGAGGGGTTTGGGGTGGAGGTTGCTGCAAGAGGTCAGCCAGATAATGTGGCCCTGCATCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGCTTGAATGTGCTTGGTaGATGAGGACACAGCATGTG +
Preference number: 4 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMLECAW*MRTQHV
Trigger: CACATGCTGTGTCCTCATGCACCAAGCACATTCAAG...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp ATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTCATAGGGCACATTCTCTGTGTTCCCAGTaGCCACCCTCGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILPAAMAESKCWLFHRAHSLCSQ*PPSDSS
Trigger: GCTGGAGTCCGAGGGTGGGCACTGGGAACACAGAGA...ATGTGCCCTATGAAAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGTCTCTTCTCTCATCCTaGCATTTTGGGTGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMSLLSS*HFGCSS
Trigger: GCTTGAGCACCCAAAATGGCAGGATGAGAGAAGAGA...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GAAGGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATGTGTCCCCTCGGCACTaGGGAGAGGCAGGGAACAGG +
Preference number: 4 (lower is better)
Translates to: EGMRIMEAPPDSYLRLYYVSPRH*GEAGNR
Trigger: CCTGTTCCCTGCCTCTCCCCAGTGCCGAGGGGACAC...ATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGGAAATTGAAAGACTCTaGCCAGGCATTTCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMEIERL*PGISKS
Trigger: CGACTTGGAAATGCCTGGTCAGAGTCTTTCAATTTC...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp ACAGGCCAGCATGATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTATCTGGCTGACCTCTTaGAGCAACCTCCACCCCAAA +
Preference number: 4 (lower is better)
Translates to: TGQHDPASCYGRVQMLAFIWLTS*SNLHPK
Trigger: TTTGGGGTGGAGGTTGCTGCAAGAGGTCAGCCAGAT...AAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGATCATGCTGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp AGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACCATCATCCAAGTAAAGGAGGCAGCTCAGCGTaGAACTGTAGCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RHLQTVTYDCTIHHHPSKGGSSA*NCSPAA
Trigger: GGCGGCGGGGCTACAGTTCCACGCTGAGCTGCCTCC...TTTACTTGGATGATGGTGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATAAAATCCTACCGGGGCAATaGGCCCCGTGGGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: GAYDAEVDCSLAAMKPYKILPGQ*APWDEV
Trigger: CACCTCGTCCCACGGGGCCCATTGCCCCGGTAGGAT...TTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTAAGTCCGCTGCGTCATaGGAGCCTTCAGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PKDQYDSQGTPRTGAYDAKSAAS*EPSACG
Trigger: ACCACAAGCTGAAGGCTCTCATGACGCAGCGGACTT...AGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp ATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTCATAGGGCACATCCACACCACATCTGCTaGACTGAACCTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILPAAMAESKCWLFHRAHPHHIC*TEPVCS
Trigger: GGAGCACACAGGTTCAGTGCAGCAGATGTGGTGTGG...ATGTGCCCTATGAAAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGACCCAAAGACCAATATaGTTCACAGGGCACTCCGAG +
Preference number: 4 (lower is better)
Translates to: PRTGAYDAEVDCSLAAMKTQRPI*FTGHSE
Trigger: CTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGT...CTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp GACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGGCAGGGAAGATGCCTaGCCCTCAAAACAAAAGCGC +
Preference number: 4 (lower is better)
Translates to: DQYDSQGTPRTGAYDAEVGREDA*PSKQKR
Trigger: GCGCTTTTGTTTTGAGGGTCAGGCATCTTCCCTGCC...AACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCTGCACTGAACCTGTGTaGTCCTGTTACTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSCTEPV*SCYSAS
Trigger: GCTTGCAGAGTAACAGGAGCACACAGGTTCAGTGCA...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCTTGGCCGAGTTTTCTTaGAAAGCAGGTGGATCCACG +
Preference number: 4 (lower is better)
Translates to: PPSDSSKHSSSSSKNSQALAEFS*KAGGST
Trigger: CGTGGATCCACCTGCTTTCCAAGAAAACTCGGCCAA...GGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTTCAGTCTTGGAGTaGGATGCCAGGCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSLSVLE*DARLPS
Trigger: AGAAGGTAGCCTGGCATCCCACTCCAAGACTGAAAG...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp ACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATAAGTCCGCTGCGTCATaGGAGCCTTCAGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TGAYDAEVDCSLAAMKPYKSAAS*EPSACG
Trigger: ACCACAAGCTGAAGGCTCTCATGACGCAGCGGACTT...ATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp CTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCACACCTACCTTCTACCATGCTaGGTCCCTCACACTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGLQQTLIKLFQEFSSHTYLLPC*VPHTCL
Trigger: CAGACAAGTGTGAGGGACTCAGCATGGTAGAAGGTA...GGTGTGGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp TTTGACTCTAGTCTTCTAGAGATGGATAATACGGACTGGGAGTCATTGGTCTCTTACTTTCCACTGGGATaGAGGGAGGCCCCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: FDSSLLEMDNTDWESLVSYFPLG*REAPLP
Trigger: CGGCAGAGGGGCCTCCCTGCATCCCAGTGGAAAGTA...AGAGACCAATGACTCCCAGTCCGTATTATCCATCTCTAGAAGACTAGAGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCAGAGCCTTCAGCTTGTaGTACTTGTTGGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PPSDSSKHSSSSSKNSQARAFSL*YLLGML
Trigger: CAGCATTCCCAACAAGTACCACAAGCTGAAGGCTCT...GGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGGTTCAACAGGGGTTGTaGAAGAATGTGCCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PKTNMIHRALRGLVHMMLVQQGL*KNVPFG
Trigger: CCCAAACGGCACATTCTTCCACAACCCCTGTTGAAC...CAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp AATGATGACACTGACCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGAGGCAGGGAACAGGTaGAGAAGTCTCCCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: NDDTDPKTNMIHRALRGLEAGNR*RSLPFS
Trigger: GGAAAAAGGGAGACTTCTCCACCTGTTCCCTGCCTC...CAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGTCAGTGTCATCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 72 bp GCCAGGCTACCTTCTACCATGCTGAGTCCCTCACACTaGTCTGCAAGAAATTCAAAGCAATCTCCCTATGGC +
Preference number: 4 (lower is better)
Translates to: ARLPSTMLSPSH*SARNSKQSPYG
Trigger: GCCATAGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGCATGGTAGAAGGTAGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 72 bp TGCCTAACCCCGTGTCCTCTTACTGCTATAGTTTCTTaGCACAACAGGCTACCCTGTTGGCTGATATCCCGT +
Preference number: 4 (lower is better)
Translates to: CLTPCPLTAIVS*HNRLPCWLISR
Trigger: ACGGGATATCAGCCAACAGGGTAGCCTGTTGTGCAAAGAAACTATAGCAGTAAGAGGACACGGGGTTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTTGTCTTTGGTCATaGTGTTGCAGTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSLCLWS*CCSGYP
Trigger: AGGATAGCCACTGCAACATCATGACCAAAGACAAAG...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp CCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGAATGTGCTTGGTGCATaGGGACACAGCATGTGTATA +
Preference number: 4 (lower is better)
Translates to: PRTGAYDAEVDCSLAAMKNVLGA*GHSMCI
Trigger: TATACACATGCTGTGTCCTCATGCACCAAGCACATT...CTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCATGTCCCTATGCCATTaGAAGGGAAGAGGGTATTAC +
Preference number: 4 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSMSLCH*KGRGYY
Trigger: GTAATACCCTCTTCCCTTGCAATGGCATAGGGACAT...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCGCTTGTGGTACTTGTTaGGAATGCTGTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: PPSDSSKHSSSSSKNSQAACGTC*ECCSVE
Trigger: TTCCACAGAACAGCATTCCCAACAAGTACCACAAGC...GGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GCTGCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCTCCTGCCAGCTGCTATaGCAGAGTCCAAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: AAMKPYKLLLTTESIWESSCQLL*QSPNAG
Trigger: GCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGA...GCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCACACCTTGGGCCAAAGAAATTaGAAGACTCTGACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGLQQTLIKLFQEFSSHTLGQRN*KTLTRH
Trigger: ATGCCTGGTCAGAGTCTTTCAATTTCTTTGGCCCAA...GGTGTGGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp GGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCAACCCAAAGACCAATATaGTTCACAGGGCACTCCGAG +
Preference number: 4 (lower is better)
Translates to: GMRIMEAPPDSYLRLYYSTQRPI*FTGHSE
Trigger: CTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGT...TGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp GCTGAGTCCCTCACACTTGTCTGCAAGAAATTCAAAGCAATCTCCCTATGGCCTCTTGAATGTGCTTGGTaGATGAGGACACAGCATGTG +
Preference number: 4 (lower is better)
Translates to: AESLTLVCKKFKAISLWPLECAW*MRTQHV
Trigger: CACATGCTGTGTCCTCATGCACCAAGCACATTCAAG...AGGCCATAGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp AATGATGACACTGACCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGCAGGTTGCTATCAGTaGTTCTCTTCTCTCATCCTG +
Preference number: 4 (lower is better)
Translates to: NDDTDPKTNMIHRALRGLAGCYQ*FSSLIL
Trigger: CAGGATGAGAGAAGAGAAGCACTGATAGCAACCTGC...CAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGTCAGTGTCATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp CATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACCCATGATCCTGCCAGCTaGTATGGCAGAGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: HEDNGGTSRQLLTTVLFTHDPAS*YGRVQM
Trigger: CATTTGGACTCTGCCATAGCAGCTGGCAGGATCATG...GGTGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCAAACTTGAATGTGCTTaGTGCATGAGGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSKLECA*CMRTQH
Trigger: ATGCTGTGTCCTCATGCACCAAGCACATTCAAGTTT...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp AATGATGACACTGACCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGAGAGCCTTCAGCTTGTaGTACTTGTTGGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: NDDTDPKTNMIHRALRGLRAFSL*YLLGML
Trigger: CAGCATTCCCAACAAGTACCACAAGCTGAAGGCTCT...CAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGTCAGTGTCATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp GCTGAGTCCCTCACACTTGTCTGCAAGAAATTCAAAGCAATCTCCCTATGGCCTCTTTGTCTTTGGTCATaGTGTTGCAGTGGCTATCCT +
Preference number: 4 (lower is better)
Translates to: AESLTLVCKKFKAISLWPLCLWS*CCSGYP
Trigger: AGGATAGCCACTGCAACATCATGACCAAAGACAAAG...AGGCCATAGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCGCTCAGTTCCCCAGATaGAACATTGTTTTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSAQFPR*NIVFVK
Trigger: CTTAACAAAAACAATGTTTCATCTGGGGAACTGAGC...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp TTTGACTCTAGTCTTCTAGAGATGGATAATACGGACTGGGAGTCATTGGTCTCTCCACATCTGCTGCACTaGACCTGTGTGCTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: FDSSLLEMDNTDWESLVSPHLLH*TCVLLL
Trigger: TAACAGGAGCACACAGGTTCAGTGCAGCAGATGTGG...AGAGACCAATGACTCCCAGTCCGTATTATCCATCTCTAGAAGACTAGAGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGTTCCTTGCAGTGAAATaGCGAAGGCATATAGTCAGT +
Preference number: 4 (lower is better)
Translates to: PKTNMIHRALRGLVHMMLFLAVK*RRHIVS
Trigger: ACTGACTATATGCCTTCGTCATTTCACTGCAAGGAA...CAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp ATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGGAGCTAGTCTTGGAGTGGGATaGCAGGCTACCTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: INSCSQQNPFGKAEWRGASLGVG*QATFYH
Trigger: ATGGTAGAAGGTAGCCTGGCATCCCACTCCAAGACT...AGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAAAGCCACACCACATCTaGTGCACTGAACCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRKPHHI*CTEPVC
Trigger: GCACACAGGTTCAGTGCAGCAGATGTGGTGTGGCTT...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAACTTGAATGTGCTTaGTGCATGAGGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: PKTNMIHRALRGLVHMMLKLECA*CMRTQH
Trigger: ATGCTGTGTCCTCATGCACCAAGCACATTCAAGTTT...CAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGCAAGCTTTCAGTCTTaGAGTGGGATGCCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRASFQS*SGMPGY
Trigger: GTAGCCTGGCATCCCACTCCAAGACTGAAAGCTTGC...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp AATGATGACACTGACCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGAGTCTCCCTTTTTCCTaGAGCTTAGACTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: NDDTDPKTNMIHRALRGLSLPFS*SLDFRG
Trigger: TCCTCTGAAGTCTAAGCTCCAGGAAAAAGGGAGACT...CAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGTCAGTGTCATCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACCTGGACATTTCCCGCATaGGACCGTTTCAGAGTCATT +
Preference number: 4 (lower is better)
Translates to: HEDNGGTSRQLLTTVLFTWTFPA*DRFRVI
Trigger: AATGACTCTGAAACGGTCCCATGCGGGAAATGTCCA...GGTGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GAAGGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATAAATCCAGGACTTCATaGACATTTCCCGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: EGMRIMEAPPDSYLRLYYKSRTS*TFPAWD
Trigger: GTCCCATGCGGGAAATGTCCATGAAGTCCTGGATTT...ATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 72 bp ATGGACATTTCCCGCATGGGACCGTTTCAGAGTCATTaGCTCATCCCACGAGTTTTTACTGCGCATCTACAA +
Preference number: 4 (lower is better)
Translates to: MDISRMGPFQSH*LIPRVFTAHLQ
Trigger: TTGTAGATGCGCAGTAAAAACTCGTGGGATGAGCAAATGACTCTGAAACGGTCCCATGCGGGAAATGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp ACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATTTGGGCCAAAGAAATTaGAAGACTCTGACCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TGAYDAEVDCSLAAMKPYLGQRN*KTLTRH
Trigger: ATGCCTGGTCAGAGTCTTTCAATTTCTTTGGCCCAA...ATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp TTTCCCCAAGCCCCAGACTTGAAGAGAATGATGACACTGACCCAAAGACCAATAAATGTGCTTGGTGCATaGGGACACAGCATGTGTATA +
Preference number: 4 (lower is better)
Translates to: FPQAPDLKRMMTLTQRPINVLGA*GHSMCI
Trigger: TATACACATGCTGTGTCCTCATGCACCAAGCACATT...TATTGGTCTTTGGGTCAGTGTCATCATTCTCTTCAAGTCTGGGGCTTGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp CCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGGCTCAGTTCCCCAGATaGAACATTGTTTTTGTTAAG +
Preference number: 4 (lower is better)
Translates to: PKTNMIHRALRGLVHMMLAQFPR*NIVFVK
Trigger: CTTAACAAAAACAATGTTTCATCTGGGGAACTGAGC...CAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp ACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATGTCTTTCGTCAGCTTTaGGCCTTTAGCCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: TGAYDAEVDCSLAAMKPYVFRQL*AFSQNS
Trigger: AGAATTCTGGCTAAAGGCTCAAAGCTGACGAAAGAC...ATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp CCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGTCAGTTGTGATAAGTTaGCAAATTCCTTACAGATGG +
Preference number: 4 (lower is better)
Translates to: PRTGAYDAEVDCSLAAMKSVVIS*QIPYRW
Trigger: CCATCTGTAAGGAATTTGGCAACTTATCACAACTGA...CTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGACTGCTTGGCCTTCCTTaGAGTGAAATGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRLLGLP*SEMTKA
Trigger: TGCCTTCGTCATTTCACTGCAAGGAAGGCCAAGCAG...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp ACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATCCTCATTCAAAAATCTaGTTGGCCTTCCTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: TGAYDAEVDCSLAAMKPYPHSKI*LAFLAV
Trigger: CACTGCAAGGAAGGCCAAGCAGATTTTTGAATGAGG...ATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp AAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGCGACGGCAGGGAAGATaGCTGACCCTCAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: KPYKLLLTTESIWESRVERRQGR*LTLKTK
Trigger: TTTTGTTTTGAGGGTCAGGCATCTTCCCTGCCGTCG...CTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTAGCTGGATTCTGTTATaGGAAAGTCTCAAAACTGTC +
Preference number: 4 (lower is better)
Translates to: PKDQYDSQGTPRTGAYDASWILL*ESLKTV
Trigger: GACAGTTTTGAGACTTTCCCATAACAGAATCCAGCT...AGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp CCGCATGGGACCGTTTCAGAGTCATTTGCTCATCCCACGAGTTTTTACTGCGCACAAGTCGTTTCTATGTaGTTGAGGGTAAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: PHGTVSESFAHPTSFYCAQVVSM*LRVKFS
Trigger: ACTGAATTTTACCCTCAACCACATAGAAACGACTTG...TGCGCAGTAAAAACTCGTGGGATGAGCAAATGACTCTGAAACGGTCCCATGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GAAGGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATGCTTGTGGTACTTGTTaGGAATGCTGTTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: EGMRIMEAPPDSYLRLYYACGTC*ECCSVE
Trigger: TTCCACAGAACAGCATTCCCAACAAGTACCACAAGC...ATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
3UTR CAA 72 bp GACTGTTCCCTTGCTGCCATGAAGCCATATAAACTCTaGCTCACAACAGAATCCATTTGGGAAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: DCSLAAMKPYKL*LTTESIWESRV
Trigger: CACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGCAGCAAGGGAACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp AATGATGACACTGACCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGTTGTTAAGTCTTTCCTaGAGGCATGAGGATAATGGA +
Preference number: 4 (lower is better)
Translates to: NDDTDPKTNMIHRALRGLLLSLS*RHEDNG
Trigger: TCCATTATCCTCATGCCTTCAGGAAAGACTTAACAA...CAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGGTCAGTGTCATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp ATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGGAGCTCCTGTAGTTAACTATTaGATAAGGCAGACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: INSCSQQNPFGKAEWRGAPVVNY*IRQTGQ
Trigger: CTGGCCTGTCTGCCTTATTCAATAGTTAACTACAGG...AGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGATCCCATCATCACTCCTaGATCTTGGGCAGATACCAT +
Preference number: 4 (lower is better)
Translates to: AMKPYKLLLTTESIWESRSHHHS*ILGRYH
Trigger: ATGGTATCTGCCCAAGATTCAGGAGTGATGATGGGA...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp GGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATAAAGGTACTTGTTGGGAATaGTGTTCTGTGGAATGGGTT +
Preference number: 4 (lower is better)
Translates to: GAYDAEVDCSLAAMKPYKGTCWE*CSVEWV
Trigger: AACCCATTCCACAGAACAGCATTCCCAACAAGTACC...TTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp ACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATTTTCCGTCGGAGAACTaGATTCTGGTTCCAACTATT +
Preference number: 4 (lower is better)
Translates to: TGAYDAEVDCSLAAMKPYFPSEN*ILVPTI
Trigger: AATAGTTGGAACCAGAATCCAGTTCTCCGACGGAAA...ATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp CCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCTTAAATCAAGTAGCTaGATTCTGTTATGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PRTGAYDAEVDCSLAAMKLKSSS*ILLWES
Trigger: ACTTTCCCATAACAGAATCCAGCTACTTGATTTAAG...CTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp AAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGTTCTTGGAAAGCAGGTaGATCCACGTCTTTCACCTC +
Preference number: 4 (lower is better)
Translates to: KPYKLLLTTESIWESRVEFLESR*IHVFHL
Trigger: GAGGTGAAAGACGTGGATCCACCTGCTTTCCAAGAA...CTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAACATCTGTGAGTTATTaGAGGGCCTTGAGTGTACCC +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRTSVSY*RALSVP
Trigger: GGGTACACTCAAGGCCCTCCAATAACTCACAGATGT...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
3UTR CAA 72 bp TTTGATAAGTCCAGACTGGCTGTGTCTAGTATCATGTaGGTGCAGTTACTGTCTTTCGTCAGCTTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: FDKSRLAVSSIM*VQLLSFVSFEP
Trigger: AGGCTCAAAGCTGACGAAAGACAGTAACTGCACCAACATGATACTAGACACAGCCAGTCTGGACTTATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATAAATTTCCGTCGGAGAACTaGATTCTGGTTCCAACTATT +
Preference number: 4 (lower is better)
Translates to: GAYDAEVDCSLAAMKPYKFPSEN*ILVPTI
Trigger: AATAGTTGGAACCAGAATCCAGTTCTCCGACGGAAA...TTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGATTTGGGAAAGCAGAGTaGAGAGGAGCTGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRFGKAE*RGAEKL
Trigger: CAGTTTTTCAGCTCCTCTCCACTCTGCTTTCCCAAA...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp AAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGTTTGGGAAAGCAGAGTaGAGAGGAGCTGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: KPYKLLLTTESIWESRVEFGKAE*RGAEKL
Trigger: CAGTTTTTCAGCTCCTCTCCACTCTGCTTTCCCAAA...CTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGCAGAGTCCAAATGCTaGCTTTTTCATAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: AMKPYKLLLTTESIWESRAESKC*LFHRAH
Trigger: ATGTGCCCTATGAAAAAGCCAGCATTTGGACTCTGC...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp CCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTATCACTCCTGAATCTTaGGCAGATACCATAAATTTT +
Preference number: 4 (lower is better)
Translates to: PKDQYDSQGTPRTGAYDAITPES*ADTINF
Trigger: AAAATTTATGGTATCTGCCCAAGATTCAGGAGTGAT...AGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp ATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGGAGCTGAGGAGCTGAAAAACTaGGCATTTACTCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: INSCSQQNPFGKAEWRGAEELKN*AFTQKR
Trigger: TCTCTTTTGAGTAAATGCTCAGTTTTTCAGCTCCTC...AGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR GCA 90 bp AATTTGGCCGAGTTTTCTTGGAAAGCAGGTGGATCCACGTCTTTCACCTCAACATCATTGGTCTCTTTCTaGTCTTTTGATAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NLAEFSWKAGGSTSFTSTSLVSF*SFDKSR
Trigger: TCTGGACTTATCAAAAGAGCAGAAAGAGACCAATGA...TGTTGAGGTGAAAGACGTGGATCCACCTGCTTTCCAAGAAAACTCGGCCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GAAGGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATCAAGTCGTTTCTATGTaGTTGAGGGTAAAATTCAGT +
Preference number: 4 (lower is better)
Translates to: EGMRIMEAPPDSYLRLYYQVVSM*LRVKFS
Trigger: ACTGAATTTTACCCTCAACCACATAGAAACGACTTG...ATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp ATCAAGCTCTTCCAAGAATTCTCAAGCCACACCACATCTGCTGCACTGAACCTGTCTGTGAAAACGTTCTaGGTAAAGTTCAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: IKLFQEFSSHTTSAALNLSVKTF*VKFKNL
Trigger: CAAGTTTTTGAACTTTACCCAGAACGTTTTCACAGA...CAGGTTCAGTGCAGCAGATGTGGTGTGGCTTGAGAATTCTTGGAAGAGCTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAATGGATAATACGGACTaGGAGTCATTGGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AMKPYKLLLTTESIWESRMDNTD*ESLVSF
Trigger: GAAAGAGACCAATGACTCCCAGTCCGTATTATCCAT...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp TTTGACTCTAGTCTTCTAGAGATGGATAATACGGACTGGGAGTCATTGGTCTCTACAACAAAGTTCTGTTaGATCTCCTCCCATCATCAC +
Preference number: 4 (lower is better)
Translates to: FDSSLLEMDNTDWESLVSTTKFC*ISSHHH
Trigger: GTGATGATGGGAGGAGATCCAACAGAACTTTGTTGT...AGAGACCAATGACTCCCAGTCCGTATTATCCATCTCTAGAAGACTAGAGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CCA 90 bp GCTGCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCTGTGAAGAAAAGAAATaGGAAGAATGTGACGGAGAG +
Preference number: 4 (lower is better)
Translates to: AAMKPYKLLLTTESIWESCEEKK*EECDGE
Trigger: CTCTCCGTCACATTCTTCCCATTTCTTTTCTTCACA...GCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp ATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGGAGCTGTACAAAGCTGTCTGTaGAAACAGAAAAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: INSCSQQNPFGKAEWRGAVQSCL*KQKNLV
Trigger: AACCAAGTTTTTCTGTTTTCACAGACAGCTTTGTAC...AGCTCCTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGATTGTTAAGTCTTTCCTaGAGGCATGAGGATAATGGA +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRLLSLS*RHEDNG
Trigger: TCCATTATCCTCATGCCTTCAGGAAAGACTTAACAA...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp AGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACCATCATCCAAGTAAAGAGGAGCTGAAAAACTaGGCATTTACTCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RHLQTVTYDCTIHHHPSKEELKN*AFTQKR
Trigger: TCTCTTTTGAGTAAATGCTCAGTTTTTCAGCTCCTC...TTTACTTGGATGATGGTGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp GAAGGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATCTTAAATCAAGTAGCTaGATTCTGTTATGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: EGMRIMEAPPDSYLRLYYLKSSS*ILLWES
Trigger: ACTTTCCCATAACAGAATCCAGCTACTTGATTTAAG...ATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAAGGTCTTTTGGAACATaGATAAGACCTCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: AMKPYKLLLTTESIWESRRSFGT*IRPLFD
Trigger: GTCAAAAAGAGGTCTTATTCATGTTCCAAAAGACCT...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR TCA 90 bp CATCAAGCACTTGTATTTGCCAAACACTATTTACCAGTCTCTGTGTTCCCAGTGAGGTCTTTTGGAACATaGATAAGACCTCTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: HQALVFAKHYLPVSVFPVRSFGT*IRPLFD
Trigger: GTCAAAAAGAGGTCTTATTCATGTTCCAAAAGACCT...CACTGGGAACACAGAGACTGGTAAATAGTGTTTGGCAAATACAAGTGCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CATGTGAAGAAATTCACATCCTTTTACCATGTCAATAATGGGAGGGCAGGTTGCGTACAAAGCTGTCTGTaGAAACAGAAAAACTTGGTT +
Preference number: 4 (lower is better)
Translates to: HVKKFTSFYHVNNGRAGCVQSCL*KQKNLV
Trigger: AACCAAGTTTTTCTGTTTTCACAGACAGCTTTGTAC...GCAACCTGCCCTCCCATTATTGACATGGTAAAAGGATGTGAATTTCTTCACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CATCAAGCACTTGTATTTGCCAAACACTATTTACCAGTCTCTGTGTTCCCAGTGTTCTTCAGAGCATCTTaGTATGAGTCCAAATTCAAG +
Preference number: 4 (lower is better)
Translates to: HQALVFAKHYLPVSVFPVFFRAS*YESKFK
Trigger: CTTGAATTTGGACTCATATCAAGATGCTCTGAAGAA...CACTGGGAACACAGAGACTGGTAAATAGTGTTTGGCAAATACAAGTGCTTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR TCA 90 bp CATGTGAAGAAATTCACATCCTTTTACCATGTCAATAATGGGAGGGCAGGTTGCAACTGGTTTATTGAATaGACTAAGTCCAGAAAGCGA +
Preference number: 4 (lower is better)
Translates to: HVKKFTSFYHVNNGRAGCNWFIE*TKSRKR
Trigger: TCGCTTTCTGGACTTAGTTCATTCAATAAACCAGTT...GCAACCTGCCCTCCCATTATTGACATGGTAAAAGGATGTGAATTTCTTCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp AAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGTCAGTTGTGATAAGTTaGCAAATTCCTTACAGATGG +
Preference number: 4 (lower is better)
Translates to: KPYKLLLTTESIWESRVESVVIS*QIPYRW
Trigger: CCATCTGTAAGGAATTTGGCAACTTATCACAACTGA...CTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAACATATCTAAGACTTTaGTTTTCAGCGGTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: AMKPYKLLLTTESIWESRTYLRL*FSAVGL
Trigger: AAGACCTACCGCTGAAAACCAAAGTCTTAGATATGT...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAAAACTCACAATAGGATaGCAGGATATCTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: AMKPYKLLLTTESIWESRKLTIG*QDIFCN
Trigger: GTTGCAAAAGATATCCTGCCATCCTATTGTGAGTTT...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp CATTGTCTCTGTCTTCTCTATATTCTAGATGTCCCTATGCCATTGCAAGGGAAGAAACTCACAATAGGATaGCAGGATATCTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: HCLCLLYILDVPMPLQGKKLTIG*QDIFCN
Trigger: GTTGCAAAAGATATCCTGCCATCCTATTGTGAGTTT...CTTCCCTTGCAATGGCATAGGGACATCTAGAATATAGAGAAGACAGAGACAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR GCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAAGCCATATAAACTCTTaGTCACAACAGAATCCATTT +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRSHINS*SQQNPF
Trigger: AAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CCA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGATCTGTGAAAACGTTCTaGGTAAAGTTCAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRSVKTF*VKFKNL
Trigger: CAAGTTTTTGAACTTTACCCAGAACGTTTTCACAGA...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGTCTCATCCTGCCATTTaGGGTGCTCAAGCCAACCTT +
Preference number: 5 (lower is better)
Translates to: QMGRSSTHREGVHGQGRASHPAI*GAQANL
Trigger: AAGGTTGGCTTGAGCACCCAAAATGGCAGGATGAGA...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGTTTGGGCCAAAGAAATaGAAAGACTCTGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: QMGRSSTHREGVHGQGRAFGPKK*KDSDQA
Trigger: TGCCTGGTCAGAGTCTTTCAATTTCTTTGGCCCAAA...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGCAAGGTGAAGGGTTTTaGCATTCAGAATTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: QMGRSSTHREGVHGQGRAQGEGF*HSEFVD
Trigger: GTCTACAAATTCTGAATGCAAAAACCCTTCACCTTG...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CAGATGGGGAGGAGCAGCACCCACCGCGAAGGTGTCCACGGCCAAGGTCGGGCGGCCGAAACTGGTTTATaGAATGAACTAAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: QMGRSSTHREGVHGQGRAAETGL*NELSPE
Trigger: TTCTGGACTTAGTTCATTCAATAAACCAGTTTCGGC...CGCCCGACCTTGGCCGTGGACACCTTCGCGGTGGGTGCTGCTCCTCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGGATGTCCCTATGCCATaGCAAGGGAAGAGGGTATTA +
Preference number: 5 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMDVPMP*QGKRVL
Trigger: TAATACCCTCTTCCCTTGCAATGGCATAGGGACATC...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCCCCAAGCCCCAGACTaGAAGAGAATGATGACACTG +
Preference number: 5 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSPQAPD*KRMMTL
Trigger: CAGTGTCATCATTCTCTTCAAGTCTGGGGCTTGGGG...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCTGCAAGCTTTCAGTCTaGGAGTGGGATGCCAGGCTA +
Preference number: 5 (lower is better)
Translates to: PPSDSSKHSSSSSKNSQACKLSV*EWDARL
Trigger: TAGCCTGGCATCCCACTCCAAGACTGAAAGCTTGCA...GGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp GGGCTGTCTCTAACTGGCAGGCTAACCTCACCGCCTAGCTCAGTTCCCCAGATGGTCGTTTCTATGTGGTaGAGGGTAAAATTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: GLSLTGRLTSPPSSVPQMVVSMW*RVKFSK
Trigger: CTTACTGAATTTTACCCTCAACCACATAGAAACGAC...CATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAGTTAGAGACAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GCTGAGTCCCTCACACTTGTCTGCAAGAAATTCAAAGCAATCTCCCTATGGCCTTATCTGGCTGACCTCTaGCAGCAACCTCCACCCCAA +
Preference number: 5 (lower is better)
Translates to: AESLTLVCKKFKAISLWPYLADL*QQPPPQ
Trigger: TTGGGGTGGAGGTTGCTGCAAGAGGTCAGCCAGATA...AGGCCATAGGGAGATTGCTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGTTTGGCCGAGTTTTCTaGGAAAGCAGGTGGATCCAC +
Preference number: 5 (lower is better)
Translates to: PKTNMIHRALRGLVHMMLFGRVF*ESRWIH
Trigger: GTGGATCCACCTGCTTTCCAAGAAAACTCGGCCAAA...CAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGTTCAGCTTGTGGTACTaGTTGGGAATGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: PRTGAYDAEVDCSLAAMKFSLWY*LGMLFC
Trigger: ACAGAACAGCATTCCCAACAAGTACCACAAGCTGAA...CTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGTCTGTTCAACAGGGGTaGTGGAAGAATGTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: PKTNMIHRALRGLVHMMLSVQQG*WKNVPF
Trigger: AAACGGCACATTCTTCCACAACCCCTGTTGAACAGA...CAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp ATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTCATAGGGCACATGGCTATCCTAAAGGGTaGTTCTTCTTCAGAGCATCT +
Preference number: 5 (lower is better)
Translates to: ILPAAMAESKCWLFHRAHGYPKG*FFFRAS
Trigger: AGATGCTCTGAAGAAGAACAACCCTTTAGGATAGCC...ATGTGCCCTATGAAAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CCACCCTCGGACTCCAGCAAACACTCATCAAGCTCTTCCAAGAATTCTCAAGCCCATTCAAAAATCTGCTaGGCCTTCCTTGCAGTGAAA +
Preference number: 5 (lower is better)
Translates to: PPSDSSKHSSSSSKNSQAHSKIC*AFLAVK
Trigger: TTTCACTGCAAGGAAGGCCAAGCAGATTTTTGAATG...GGCTTGAGAATTCTTGGAAGAGCTTGATGAGTGTTTGCTGGAGTCCGAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTATAGGTTCTTTGTCTTaGGTCATGATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PKDQYDSQGTPRTGAYDAIGSLS*VMMLQW
Trigger: CCACTGCAACATCATGACCAAAGACAAAGAACCTAT...AGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCAATGAGAGCCTTCAGCTaGTGGTACTTGTTGGGAATG +
Preference number: 5 (lower is better)
Translates to: GMRIMEAPPDSYLRLYYSMRAFS*WYLLGM
Trigger: CATTCCCAACAAGTACCACAAGCTGAAGGCTCTCAT...TGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACCCACAACAGAATCCATTaGGGAAAGCAGAGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: HEDNGGTSRQLLTTVLFTHNRIH*GKQSGE
Trigger: CTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTG...GGTGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp ACTGGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATCACAACAGAATCCATTaGGGAAAGCAGAGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: TGAYDAEVDCSLAAMKPYHNRIH*GKQSGE
Trigger: CTCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTG...ATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp TTTCCCCAAGCCCCAGACTTGAAGAGAATGATGACACTGACCCAAAGACCAATACATATGATGCTGAAGTaGACTGTTCCCTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: FPQAPDLKRMMTLTQRPIHMMLK*TVPLLP
Trigger: TGGCAGCAAGGGAACAGTCAACTTCAGCATCATATG...TATTGGTCTTTGGGTCAGTGTCATCATTCTCTTCAAGTCTGGGGCTTGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CATTGTCTCTGTCTTCTCTATATTCTAGATGTCCCTATGCCATTGCAAGGGAAGCCCCAAGCCCCAGACTaGAAGAGAATGATGACACTG +
Preference number: 5 (lower is better)
Translates to: HCLCLLYILDVPMPLQGKPQAPD*KRMMTL
Trigger: CAGTGTCATCATTCTCTTCAAGTCTGGGGCTTGGGG...CTTCCCTTGCAATGGCATAGGGACATCTAGAATATAGAGAAGACAGAGACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp GATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTGAAGTTGACTGTTCCGATGCAAGTGAGCAATaGGCAGCAAATCTAATTTTT +
Preference number: 5 (lower is better)
Translates to: DSQGTPRTGAYDAEVDCSDASEQ*AANLIF
Trigger: AAAAATTAGATTTGCTGCCAATTGCTCACTTGCATC...GGAACAGTCAACTTCAGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCATTTGGGCCAAAGAAATaGAAAGACTCTGACCAGGCA +
Preference number: 5 (lower is better)
Translates to: GMRIMEAPPDSYLRLYYSFGPKK*KDSDQA
Trigger: TGCCTGGTCAGAGTCTTTCAATTTCTTTGGCCCAAA...TGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACCTTCAGCTTGTGGTACTaGTTGGGAATGCTGTTCTGT +
Preference number: 5 (lower is better)
Translates to: HEDNGGTSRQLLTTVLFTFSLWY*LGMLFC
Trigger: ACAGAACAGCATTCCCAACAAGTACCACAAGCTGAA...GGTGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GGTGCATATGATGCTGAAGTTGACTGTTCCCTTGCTGCCATGAAGCCATATAAAATGAGAGCCTTCAGCTaGTGGTACTTGTTGGGAATG +
Preference number: 5 (lower is better)
Translates to: GAYDAEVDCSLAAMKPYKMRAFS*WYLLGM
Trigger: CATTCCCAACAAGTACCACAAGCTGAAGGCTCTCAT...TTTATATGGCTTCATGGCAGCAAGGGAACAGTCAACTTCAGCATCATATGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATTCACTGAGTCCCTCACACTaGTCTGCAAGAAATTCAAAG +
Preference number: 5 (lower is better)
Translates to: GMRIMEAPPDSYLRLYYSLSPSH*SARNSK
Trigger: CTTTGAATTTCTTGCAGACAAGTGTGAGGGACTCAG...TGAATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGACAGATGGGCAGGGCCTaGAAATCATTGAATGAGAGA +
Preference number: 5 (lower is better)
Translates to: AMKPYKLLLTTESIWESRQMGRA*KSLNER
Trigger: TCTCTCATTCAATGATTTCAAGGCCCTGCCCATCTG...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp ATCCTGCCAGCTGCTATGGCAGAGTCCAAATGCTGGCTTTTTCATAGGGCACATGATGCAAGTGAGCAATaGGCAGCAAATCTAATTTTT +
Preference number: 5 (lower is better)
Translates to: ILPAAMAESKCWLFHRAHDASEQ*AANLIF
Trigger: AAAAATTAGATTTGCTGCCAATTGCTCACTTGCATC...ATGTGCCCTATGAAAAAGCCAGCATTTGGACTCTGCCATAGCAGCTGGCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CCCAAAGACCAATATGATTCACAGGGCACTCCGAGGACTGGTGCATATGATGCTTCCCCAGATGAAACATaGTTTTTGTTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: PKDQYDSQGTPRTGAYDASPDET*FLLSLS
Trigger: GGAAAGACTTAACAAAAACAATGTTTCATCTGGGGA...AGCATCATATGCACCAGTCCTCGGAGTGCCCTGTGAATCATATTGGTCTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp CATTGTCTCTGTCTTCTCTATATTCTAGATGTCCCTATGCCATTGCAAGGGAAGCATATGATGCTGAAGTaGACTGTTCCCTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: HCLCLLYILDVPMPLQGKHMMLK*TVPLLP
Trigger: TGGCAGCAAGGGAACAGTCAACTTCAGCATCATATG...CTTCCCTTGCAATGGCATAGGGACATCTAGAATATAGAGAAGACAGAGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CTTGCTGCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAACGGACTGGGAGTCATaGGTCTCTTTCTGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LAAMKPYKLLLTTESIWETDWES*VSFCSF
Trigger: AAAAGAGCAGAAAGAGACCAATGACTCCCAGTCCGT...TTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp AAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGGGCTATCCTAAAGGGTaGTTCTTCTTCAGAGCATCT +
Preference number: 5 (lower is better)
Translates to: KPYKLLLTTESIWESRVEGYPKG*FFFRAS
Trigger: AGATGCTCTGAAGAAGAACAACCCTTTAGGATAGCC...CTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GAAGGCATGAGGATAATGGAGGCACCTCCAGACAGTTACTTACGACTGTACTATCAGCTGCAAATAAATTaGGCCGAGTTTTCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: EGMRIMEAPPDSYLRLYYQLQIN*AEFSWK
Trigger: TTTCCAAGAAAACTCGGCCAAATTTATTTGCAGCTG...ATAGTACAGTCGTAAGTAACTGTCTGGAGGTGCCTCCATTATCCTCATGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CATCAAGCACTTGTATTTGCCAAACACTATTTACCAGTCTCTGTGTTCCCAGTGACTGCTATAGTTTCTTaGCACAACAGGCTACCCTGT +
Preference number: 5 (lower is better)
Translates to: HQALVFAKHYLPVSVFPVTAIVS*HNRLPC
Trigger: ACAGGGTAGCCTGTTGTGCAAAGAAACTATAGCAGT...CACTGGGAACACAGAGACTGGTAAATAGTGTTTGGCAAATACAAGTGCTTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp CATGTGAAGAAATTCACATCCTTTTACCATGTCAATAATGGGAGGGCAGGTTGCATAGGTTCTTTGTCTTaGGTCATGATGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: HVKKFTSFYHVNNGRAGCIGSLS*VMMLQW
Trigger: CCACTGCAACATCATGACCAAAGACAAAGAACCTAT...GCAACCTGCCCTCCCATTATTGACATGGTAAAAGGATGTGAATTTCTTCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436693.6
CDS-3UTR CAA 90 bp TTTCCCCAAGCCCCAGACTTGAAGAGAATGATGACACTGACCCAAAGACCAATATTCAGTTGTGATAAGTaGCCAAATTCCTTACAGATG +
Preference number: 5 (lower is better)
Translates to: FPQAPDLKRMMTLTQRPIFSCDK*PNSLQM
Trigger: CATCTGTAAGGAATTTGGCAACTTATCACAACTGAA...TATTGGTCTTTGGGTCAGTGTCATCATTCTCTTCAAGTCTGGGGCTTGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp GCCATGAAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGACAAGGTGAAGGGTTTTaGCATTCAGAATTTGTAGAC +
Preference number: 5 (lower is better)
Translates to: AMKPYKLLLTTESIWESRQGEGF*HSEFVD
Trigger: GTCTACAAATTCTGAATGCAAAAACCCTTCACCTTG...TCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGAGTCGTTTCTATGTGGTaGAGGGTAAAATTCAGTAAG +
Preference number: 5 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRVVSMW*RVKFSK
Trigger: CTTACTGAATTTTACCCTCAACCACATAGAAACGAC...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp AGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGATTCAGTTGTGATAAGTaGCCAAATTCCTTACAGATG +
Preference number: 5 (lower is better)
Translates to: SHINSCSQQNPFGKAEWRFSCDK*PNSLQM
Trigger: CATCTGTAAGGAATTTGGCAACTTATCACAACTGAA...TCTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS-3UTR CAA 90 bp AAGCCATATAAACTCTTGCTCACAACAGAATCCATTTGGGAAAGCAGAGTGGAGTCCCCAGATGAAACATaGTTTTTGTTAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: KPYKLLLTTESIWESRVESPDET*FLLSLS
Trigger: GGAAAGACTTAACAAAAACAATGTTTCATCTGGGGA...CTCCACTCTGCTTTCCCAAATGGATTCTGTTGTGAGCAAGAGTTTATATGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381950.1
ENST00000436693.6
CDS CCA 90 bp CCTCTTTTTGACTTGTCTACTGCAAATTCATTTCCGTCGGAGAACTaGATTCTGGTTCCAACTATTATGATCATAAGGCAAACAAAATGG +
Preference number: 5 (lower is better)
Translates to: PLFDLSTANSFPSEN*ILVPTIMIIRQTKW
Trigger: CCATTTTGTTTGCCTTATGATCATAATAGTTGGAACCAGAATCCAGTTCTCCGACGGAAATGAATTTGCAGTAGACAAGTCAAAAAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381950.1
ENST00000436693.6
ENST00000508254.5
ENST00000514655.1
ENST00000610323.2
CDS TCA 90 bp CATCATAATGTTCATCTCAGAAAACACGGTGTACAAAGCTGTCTGTaGAAACAGAAAAACTTGGTTCGTGATATGTTCTATTGTCAATGC +
Preference number: 5 (lower is better)
Translates to: HHNVHLRKHGVQSCL*KQKNLVRDMFYCQC
Trigger: GCATTGACAATAGAACATATCACGAACCAAGTTTTTCTGTTTTCACAGACAGCTTTGTACACCGTGTTTTCTGAGATGAACATTATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381950.1
ENST00000436693.6
ENST00000610323.2
CDS GCA 72 bp AAAAGCTCTTCACTGATCCATATAACTTCTCCCAACTaGCCATCAGAACACCCACAGAGACACACATACATT +
Preference number: 6 (lower is better)
Translates to: KSSSLIHITSPN*PSEHPQRHTYI
Trigger: AATGTATGTGTGTCTCTGTGGGTGTTCTGATGGGCAGTTGGGAGAAGTTATATGGATCAGTGAAGAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514655.1
CDS CCA 72 bp GACTTGTCTACTGCAAATTCATTTCCGTCGGAGAACTaGATTCTGGTTCCAACTATTATGATCATAAGGCAA +
Preference number: 6 (lower is better)
Translates to: DLSTANSFPSEN*ILVPTIMIIRQ
Trigger: TTGCCTTATGATCATAATAGTTGGAACCAGAATCCAGTTCTCCGACGGAAATGAATTTGCAGTAGACAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381950.1
ENST00000436693.6
ENST00000508254.5
ENST00000514655.1
ENST00000610323.2
CDS CAA 72 bp AATATTGAGATATTCCACAGGTTTGGGCCAAAGAAATaGAAAGACTCTGACCAGGCATTTCCAAGTCGTTTC +
Preference number: 6 (lower is better)
Translates to: NIEIFHRFGPKK*KDSDQAFPSRF
Trigger: GAAACGACTTGGAAATGCCTGGTCAGAGTCTTTCAATTTCTTTGGCCCAAACCTGTGGAATATCTCAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381950.1
ENST00000436693.6
ENST00000610323.2
CDS TCA 72 bp GGCTATCCTAAAGGGTTGTTCTTCTTCAGAGCATCTTaGTATGAGTCCAAATTCTTTCTTTGGAAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: GYPKGLFFFRAS*YESKFFLWKSE
Trigger: TTCACTCTTCCAAAGAAAGAATTTGGACTCATATCAAGATGCTCTGAAGAAGAACAACCCTTTAGGATAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514655.1
CDS TCA 72 bp GTTCATCTCAGAAAACACGGTGTACAAAGCTGTCTGTaGAAACAGAAAAACTTGGTTCGTGATATGTTCTAT +
Preference number: 6 (lower is better)
Translates to: VHLRKHGVQSCL*KQKNLVRDMFY
Trigger: ATAGAACATATCACGAACCAAGTTTTTCTGTTTTCACAGACAGCTTTGTACACCGTGTTTTCTGAGATGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381950.1
ENST00000436693.6
ENST00000610323.2
CDS TCA 72 bp GGCTATCCTAAAGGGTTGTTCTTCTTCAGAGCATCTTaGTATGAGTCCAAATTCAAGATCTCTTTTTCAGAA +
Preference number: 6 (lower is better)
Translates to: GYPKGLFFFRAS*YESKFKISFSE
Trigger: TTCTGAAAAAGAGATCTTGAATTTGGACTCATATCAAGATGCTCTGAAGAAGAACAACCCTTTAGGATAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436693.6
ENST00000508254.5