RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLR10 (Homo sapiens)

Ensembl gene IDs: ENSG00000174123

Ensembl transcript IDs: ENST00000308973.9, ENST00000361424.6, ENST00000502321.5, ENST00000506111.1, ENST00000507953.1, ENST00000508334.1, ENST00000613579.4, ENST00000622002.4

Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCATCTCTTGACCTCGTaGGTCACCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLHLLTS*VTHLGL
Trigger: GAGGCCAAGGTGGGTGACCCACGAGGTCAAGAGATG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAGTGGGTCACCCACCTTaGCCTCCCATAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTVGHPP*PPIVLG
Trigger: TCCCAGCACTATGGGAGGCCAAGGTGGGTGACCCAC...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACATCTCTTGACCTCGTaGGTCACCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTHLLTS*VTHLGL
Trigger: GAGGCCAAGGTGGGTGACCCACGAGGTCAAGAGATG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTCCCAACAGTGTATGTaGTCCCCAACTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLSQQCM*SPTSQG
Trigger: TCCTTGGGAAGTTGGGGACCACATACACTGTTGGGA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR GCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGACAAGAGTGAGCCACTaGACCTGGCCACATTTTTCA +
Preference number: 2 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLTRVSH*TWPHFS
Trigger: TGAAAAATGTGGCCAGGTGCAGTGGCTCACTCTTGT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATCCCAACAGTGTATGTaGTCCCCAACTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTSQQCM*SPTSQG
Trigger: TCCTTGGGAAGTTGGGGACCACATACACTGTTGGGA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATCCCAACAGTGTATGTaGTCCCCAACTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSQQCM*SPTSQG
Trigger: TCCTTGGGAAGTTGGGGACCACATACACTGTTGGGA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR GCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAACAAGAGTGAGCCACTaGACCTGGCCACATTTTTCA +
Preference number: 2 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKTRVSH*TWPHFS
Trigger: TGAAAAATGTGGCCAGGTGCAGTGGCTCACTCTTGT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAGATTATAAACAATCCTaGGATGAACACCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKDYKQS*DEHLFP
Trigger: TGGAAAAAGGTGTTCATCCCAGGATTGTTTATAATC...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
3UTR-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACGTGGGTCACCCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKRGSPT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCAAGGTGGGTGACCCACG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATGTGGGTCACCCACCTTaGCCTCCCATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDVGHPP*PPIVLG
Trigger: TCCCAGCACTATGGGAGGCCAAGGTGGGTGACCCAC...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATGTCACCAGGCTGGAGTaGAGTGGCTCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDVTRLE*SGSISA
Trigger: AGCTGAGATCGAGCCACTGCACTCCAGCCTGGTGAC...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCAGTGTCGTTGTGGCTaGGGTCAAGTCTGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDQCRCG*GQVCGN
Trigger: GTTCCCGCAGACTTGACCCCAGCCACAACGACACTG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCATCTCTTGACCTCGTaGGTCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDHLLTS*VTHLGL
Trigger: GAGGCCAAGGTGGGTGACCCACGAGGTCAAGAGATG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATAAAACCCCCACGGCTTaGACTCTCTCAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDKTPTA*TLSAEL
Trigger: CAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGGTTTT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361424.6
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGGTGGGTCACCCACCTTaGCCTCCCATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLVGHPP*PPIVLG
Trigger: TCCCAGCACTATGGGAGGCCAAGGTGGGTGACCCAC...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGATGGTCTCCATCTCTTaGCCTCGTGGGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLMVSIS*PRGSPT
Trigger: GGTGGGTGACCCACGAGGTCAAGAGATGGAGACCAT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDQQSCR*VDDSLT
Trigger: TGTCAACGAATCATCCACGCACCTGCAGCTCTGCTG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCCAAGCTGGCTACTGTaGCATGTCTCCGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDPSWLL*HVSVVE
Trigger: CTCAACAACGGAGACATGGCACAGTAGCCAGCTTGG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR GCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGGTCACCAGGCTGGAGTaGAGTGGCTCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLVTRLE*SGSISA
Trigger: AGCTGAGATCGAGCCACTGCACTCCAGCCTGGTGAC...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTTCTTCTGGCAGCTCTaGAGCATCACCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDFFWQL*SITLCC
Trigger: ACAGCAGAGGGTGATGCTCCAGAGCTGCCAGAAGAA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCAGTTCCCTTTCTTCTaGCAGCTCTGGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDQFPFF*QLWSIT
Trigger: GGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCAGTGTCGTTGTGGCTaGGGTCAAGTCTGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLQCRCG*GQVCGN
Trigger: GTTCCCGCAGACTTGACCCCAGCCACAACGACACTG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCCATGTTGGCCAGGATaGTCTCCATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDPCWPG*SPSLDL
Trigger: GAGGTCAAGAGATGGAGACCATCCTGGCCAACATGG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCTGCAGGTGCGTGGATaGTTCGTTGACACGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLLQVRG*FVDTVR
Trigger: TCTGACCGTGTCAACGAATCATCCACGCACCTGCAG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATACTTCCTGGCAGCTCTaGACAAAATCCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDTSWQL*TKSRDG
Trigger: CCCATCTCTGGATTTTGTTCAGAGCTGCCAGGAAGT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACATGGTCTCCATCTCTTaGCCTCGTGGGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNMVSIS*PRGSPT
Trigger: GGTGGGTGACCCACGAGGTCAAGAGATGGAGACCAT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCTCTCTCAGCAGAGCTaGAGGTGCGTGGATGATTCG +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLLSQQS*RCVDDS
Trigger: CGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTCCCAACAGTGTATGTaGTCCCCAACTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDSQQCM*SPTSQG
Trigger: TCCTTGGGAAGTTGGGGACCACATACACTGTTGGGA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAGTGGGTCACCCACCTTaGCCTCCCATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQVGHPP*PPIVLG
Trigger: TCCCAGCACTATGGGAGGCCAAGGTGGGTGACCCAC...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCATCTCTTGACCTCGTaGGTCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNHLLTS*VTHLGL
Trigger: GAGGCCAAGGTGGGTGACCCACGAGGTCAAGAGATG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATAGGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDRVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCCT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTTGATATTCAGCTGCTaGATTCCCACGGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDLIFSC*IPTACT
Trigger: AGTGCAAGCCGTGGGAATTCAGCAGCTGAATATCAA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCCATGTCTCCGTTGTTaGGGTAAGTCAGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDPCLRC*GKSGFS
Trigger: TGAGAATCCTGACTTACCTCAACAACGGAGACATGG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTCTCAGAGCATTGGCTaGGAAGTCTCCAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLSQSIG*EVSKLA
Trigger: AGCCAGCTTGGAGACTTCTCAGCCAATGCTCTGAGA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATGGTCTCCATCTCTTaGCCTCGTGGGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQMVSIS*PRGSPT
Trigger: GGTGGGTGACCCACGAGGTCAAGAGATGGAGACCAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATAGCAGCTCGAAGGTTTaGCCAGAAAAGCCCACATTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDSSSKV*PEKPTF
Trigger: AAATGTGGGCTTTTCTGGGCAAACCTTCGAGCTGCT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATACAAGAGTGAGCCACTaGACCTGGCCACATTTTTCA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDTRVSH*TWPHFS
Trigger: TGAAAAATGTGGCCAGGTGCAGTGGCTCACTCTTGT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAGTCACCAGGCTGGAGTaGAGTGGCTCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQVTRLE*SGSISA
Trigger: AGCTGAGATCGAGCCACTGCACTCCAGCCTGGTGAC...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGGAGAAGTCTCCAAGCTaGCTACTGTGCCATGTCTCC +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLEKSPS*LLCHVS
Trigger: GGAGACATGGCACAGTAGCCAGCTTGGAGACTTCTC...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTTCTTCTGGCAGCTCTaGAGCATCACCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLFFWQL*SITLCC
Trigger: ACAGCAGAGGGTGATGCTCCAGAGCTGCCAGAAGAA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCAGTTCCCTTTCTTCTaGCAGCTCTGGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLQFPFF*QLWSIT
Trigger: GGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACAATCCAGTGTCGTTGTaGCTGGGGTCAAGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNNPVSL*LGSSLR
Trigger: CCGCAGACTTGACCCCAGCCACAACGACACTGGATT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCAGGGCAGATCAAAGTaGAGACAGCAGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLQGRSK*RQQKAT
Trigger: TGTGGCCTTCTGCTGTCTCCACTTTGATCTGCCCTG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCCATGTTGGCCAGGATaGTCTCCATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLPCWPG*SPSLDL
Trigger: GAGGTCAAGAGATGGAGACCATCCTGGCCAACATGG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTGCAGGTGCGTGGATaGTTCGTTGACACGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQLQVRG*FVDTVR
Trigger: TCTGACCGTGTCAACGAATCATCCACGCACCTGCAG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATGAACTGAAAGTCTACTaGAATGACTGCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDELKVY*NDCIQG
Trigger: TCCCTGGATGCAGTCATTTCAGTAGACTTTCAGTTC...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGACTTCCTGGCAGCTCTaGACAAAATCCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLTSWQL*TKSRDG
Trigger: CCCATCTCTGGATTTTGTTCAGAGCTGCCAGGAAGT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTGTGAGCCTTTGACTTaGTATCAAGGAGTTACCCCT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDCEPLT*YQGVTP
Trigger: AGGGGTAACTCCTTGATATCAAGTCAAAGGCTCACA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR GCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNQQSCR*VDDSLT
Trigger: TGTCAACGAATCATCCACGCACCTGCAGCTCTGCTG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAGATAGCCCCACGGCTTaGACTCTCTCAGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKDSPTA*TLSAEL
Trigger: CAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGCTATC...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCAGTTCCCTTTCTTCTaGCAGCTCTGGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNQFPFF*QLWSIT
Trigger: GGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAAATCCAGTGTCGTTGTaGCTGGGGTCAAGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTNPVSL*LGSSLR
Trigger: CCGCAGACTTGACCCCAGCCACAACGACACTGGATT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCAGGGCAGATCAAAGTaGAGACAGCAGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNQGRSK*RQQKAT
Trigger: TGTGGCCTTCTGCTGTCTCCACTTTGATCTGCCCTG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACATCTCTTGACCTCGTaGGTCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKHLLTS*VTHLGL
Trigger: GAGGCCAAGGTGGGTGACCCACGAGGTCAAGAGATG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATATGACAGATTCATATTaGCCACAGTTTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDMTDSY*PQFLAM
Trigger: CATGGCCAGAAACTGTGGTCAATATGAATCTGTCAT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATAGAGCTTTCAGTTTATaGTACCTGGTGGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDRAFSL*YLVGMQ
Trigger: TTGCATTCCCACCAGGTATCATAAACTGAAAGCTCT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCTTTGGTTTAAGAACTaGATTGTCAGGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDLWFKN*IVRPDS
Trigger: TGAGTCTGGCCTGACAATGCAGTTCTTAAACCAAAG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR GCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCAAGCTGGCTACTGTaGCATGTCTCCGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQPSWLL*HVSVVE
Trigger: CTCAACAACGGAGACATGGCACAGTAGCCAGCTTGG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTGGAGCATCACCCTCTaGTGTCATAACAATACTACA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDWSITL*CHNNTT
Trigger: TGTAGTATTGTTATGACAGCAGAGGGTGATGCTCCA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATTCTTCTGGCAGCTCTaGAGCATCACCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTFFWQL*SITLCC
Trigger: ACAGCAGAGGGTGATGCTCCAGAGCTGCCAGAAGAA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACAGTTCCCTTTCTTCTaGCAGCTCTGGAGCATCACC +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQQFPFF*QLWSIT
Trigger: GGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATACATGTTGGAGCAGTTaGTCATCAGTTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDTCWSS*SSVPFL
Trigger: AAGAAAGGGAACTGATGACCAACTGCTCCAACATGT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAAATCCAGTGTCGTTGTaGCTGGGGTCAAGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKNPVSL*LGSSLR
Trigger: CCGCAGACTTGACCCCAGCCACAACGACACTGGATT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATATTTACGCCTATCCTTaGGCCATTCCAAGTATGCTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDIYAYP*AIPSML
Trigger: AAGCATACTTGGAATGGCCCAAGGATAGGCGTAAAT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACAGGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNRVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCCT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTGATATTCAGCTGCTaGATTCCCACGGCTTGCACT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNLIFSC*IPTACT
Trigger: AGTGCAAGCCGTGGGAATTCAGCAGCTGAATATCAA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCCATGTCTCCGTTGTTaGGGTAAGTCAGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNPCLRC*GKSGFS
Trigger: TGAGAATCCTGACTTACCTCAACAACGGAGACATGG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATATGAGAGTTTTCAAGTaGGGCAGTTGGATAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDMRVFK*GSWIVL
Trigger: AAGAACTATCCAACTGCCTCACTTGAAAACTCTCAT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACATTGACCTAGCATCCTaGGATACCAGGGCAGATCAA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNIDLAS*DTRADQ
Trigger: TTGATCTGCCCTGGTATCTCAGGATGCTAGGTCAAT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCATGTTTGTGTGCATTaGCCTAGCATCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLHVCVH*PSILRY
Trigger: GTATCTCAGGATGCTAGGTCAATGCACACAAACATG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATATCGGACATTTCTCTTaGGTTGTTCTTGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDIGHFS*VVLGLF
Trigger: AAACAACCCAAGAACAACTCAAGAGAAATGTCCGAT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATGACATTGTGAGCCTTTaGCTTGATATCAAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDDIVSL*LDIKEL
Trigger: TAACTCCTTGATATCAAGTCAAAGGCTCACAATGTC...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR GCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTCAACAGAGCTGTGTTaGAAGATAATTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDSTELC*KIIRGD
Trigger: ATCTCCACGAATTATCTTGCAACACAGCTCTGTTGA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACAGCAGCTCGAAGGTTTaGCCAGAAAAGCCCACATTT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNSSSKV*PEKPTF
Trigger: AAATGTGGGCTTTTCTGGGCAAACCTTCGAGCTGCT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTTGATCTCAGAGCATTaGCTGAGAAGTCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLLISEH*LRSLQA
Trigger: AGCTTGGAGACTTCTCAGCCAATGCTCTGAGATCAA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCAAAACCCTGTATATTaGGTCTTCGACTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDQNPVY*VFDLIS
Trigger: TGAGATCAAGTCGAAGACCCAATATACAGGGTTTTG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTTCTTAGAGACATGTTaGAGCAGTTGGTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDFLETC*SSWSSV
Trigger: AACTGATGACCAACTGCTCCAACATGTCTCTAAGAA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCAGTGTCGTTGTGGCTaGGGTCAAGTCTGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGQCRCG*GQVCGN
Trigger: GTTCCCGCAGACTTGACCCCAGCCACAACGACACTG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACAGGGCAGATCAAAGTaGAGACAGCAGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKQGRSK*RQQKAT
Trigger: TGTGGCCTTCTGCTGTCTCCACTTTGATCTGCCCTG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATCCCAACAGTGTATGTaGTCCCCAACTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSQQCM*SPTSQG
Trigger: TCCTTGGGAAGTTGGGGACCACATACACTGTTGGGA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCATCTCTTGACCTCGTaGGTCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGHLLTS*VTHLGL
Trigger: GAGGCCAAGGTGGGTGACCCACGAGGTCAAGAGATG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAAGGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQRVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCCT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCTGCAGGTGCGTGGATaGTTCGTTGACACGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGLQVRG*FVDTVR
Trigger: TCTGACCGTGTCAACGAATCATCCACGCACCTGCAG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACCATGTCTCCGTTGTTaGGGTAAGTCAGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTPCLRC*GKSGFS
Trigger: TGAGAATCCTGACTTACCTCAACAACGGAGACATGG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTGTTGTAATAGATTTTaGCTCAGATCCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDCCNRF*LRSKCS
Trigger: GGAACACTTGGATCTGAGTCAAAATCTATTACAACA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCACAGTTTCTGGCCATaGGCAATTTTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDHSFWP*AIFIIF
Trigger: AAAAATGATGAAAATTGCTCATGGCCAGAAACTGTG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTTTTGGGCAAGCACCTaGAGACAGAATCAGACAATT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLFWAST*RQNQTI
Trigger: AATTGTCTGATTCTGTCTTCAGGTGCTTGCCCAAAA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACGAAAGTCTACTGAAATaGCTGCATCCAGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNESLLK*LHPGRS
Trigger: TGATCTCCCTGGATGCAGTCATTTCAGTAGACTTTC...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAACTTCCTGGCAGCTCTaGACAAAATCCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKTSWQL*TKSRDG
Trigger: CCCATCTCTGGATTTTGTTCAGAGCTGCCAGGAAGT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATTGACCTAGCATCCTaGGATACCAGGGCAGATCAA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQIDLAS*DTRADQ
Trigger: TTGATCTGCCCTGGTATCTCAGGATGCTAGGTCAAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAATTGACCTAGCATCCTaGGATACCAGGGCAGATCAA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTIDLAS*DTRADQ
Trigger: TTGATCTGCCCTGGTATCTCAGGATGCTAGGTCAAT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCATGTTTGTGTGCATTaGCCTAGCATCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNHVCVH*PSILRY
Trigger: GTATCTCAGGATGCTAGGTCAATGCACACAAACATG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATATCATGTTCACTGTATaGAATAAATGCGTGGAATCG +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDIMFTV*NKCVES
Trigger: CGATTCCACGCATTTATTTCATACAGTGAACATGAT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGAGAGCTTTCAGTTTATaGTACCTGGTGGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLRAFSL*YLVGMQ
Trigger: TTGCATTCCCACCAGGTATCATAAACTGAAAGCTCT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCTTCATTTAACTCTGTaGATGTCTGCAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDLHLTL*MSAVHT
Trigger: TGTATGAACTGCAGACATTCACAGAGTTAAATGAAG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTATTACCAGACATTGTaGGCCTTTGACTTGATATCA +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDYYQTL*AFDLIS
Trigger: TGATATCAAGTCAAAGGCTCACAATGTCTGGTAATA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR GCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCTCTCTCAGCAGAGCTaGAGGTGCGTGGATGATTCG +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGLSQQS*RCVDDS
Trigger: CGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTGGAGCATCACCCTCTaGTGTCATAACAATACTACA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLWSITL*CHNNTT
Trigger: TGTAGTATTGTTATGACAGCAGAGGGTGATGCTCCA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAACAAGAGTGAGCCACTaGACCTGGCCACATTTTTCA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQTRVSH*TWPHFS
Trigger: TGAAAAATGTGGCCAGGTGCAGTGGCTCACTCTTGT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAACAAGAGTGAGCCACTaGACCTGGCCACATTTTTCA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTTRVSH*TWPHFS
Trigger: TGAAAAATGTGGCCAGGTGCAGTGGCTCACTCTTGT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTGATCTCAGAGCATTaGCTGAGAAGTCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNLISEH*LRSLQA
Trigger: AGCTTGGAGACTTCTCAGCCAATGCTCTGAGATCAA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGACATGTTGGAGCAGTTaGTCATCAGTTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLTCWSS*SSVPFL
Trigger: AAGAAAGGGAACTGATGACCAACTGCTCCAACATGT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGATTTACGCCTATCCTTaGGCCATTCCAAGTATGCTT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLIYAYP*AIPSML
Trigger: AAGCATACTTGGAATGGCCCAAGGATAGGCGTAAAT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAAGGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKRVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCCT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTCTCAGAGCATTGGCTaGGAAGTCTCCAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGSQSIG*EVSKLA
Trigger: AGCCAGCTTGGAGACTTCTCAGCCAATGCTCTGAGA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACGTCACATTTCGGATCTaGAAGTGTTCCACTGATGTA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNVTFRI*KCSTDV
Trigger: TACATCAGTGGAACACTTTCAGATCCGAAATGTGAC...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGATGAGAGTTTTCAAGTaGGGCAGTTGGATAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLMRVFK*GSWIVL
Trigger: AAGAACTATCCAACTGCCTCACTTGAAAACTCTCAT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACATGACAGATTCATATTaGCCACAGTTTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNMTDSY*PQFLAM
Trigger: CATGGCCAGAAACTGTGGTCAATATGAATCTGTCAT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTTTGGGCAAGCACCTaGAGACAGAATCAGACAATT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNFWAST*RQNQTI
Trigger: AATTGTCTGATTCTGTCTTCAGGTGCTTGCCCAAAA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCGTAAGGCCATCAGATaGATAGTCTCTTTAGGTACA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNRKAIR*IVSLGT
Trigger: TGTACCTAAAGAGACTATTCATCTGATGGCCTTACG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAGAACTGAAAGTCTACTaGAATGACTGCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTELKVY*NDCIQG
Trigger: TCCCTGGATGCAGTCATTTCAGTAGACTTTCAGTTC...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAATTGACCTAGCATCCTaGGATACCAGGGCAGATCAA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKIDLAS*DTRADQ
Trigger: TTGATCTGCCCTGGTATCTCAGGATGCTAGGTCAAT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACATGTTTGTGTGCATTaGCCTAGCATCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTHVCVH*PSILRY
Trigger: GTATCTCAGGATGCTAGGTCAATGCACACAAACATG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACAGAGCTTTCAGTTTATaGTACCTGGTGGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNRAFSL*YLVGMQ
Trigger: TTGCATTCCCACCAGGTATCATAAACTGAAAGCTCT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGQQSCR*VDDSLT
Trigger: TGTCAACGAATCATCCACGCACCTGCAGCTCTGCTG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCTTTGGTTTAAGAACTaGATTGTCAGGCCAGACTCA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNLWFKN*IVRPDS
Trigger: TGAGTCTGGCCTGACAATGCAGTTCTTAAACCAAAG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR GCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTGGAGCATCACCCTCTaGTGTCATAACAATACTACA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNWSITL*CHNNTT
Trigger: TGTAGTATTGTTATGACAGCAGAGGGTGATGCTCCA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTCAACAGAGCTGTGTTaGAAGATAATTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLSTELC*KIIRGD
Trigger: ATCTCCACGAATTATCTTGCAACACAGCTCTGTTGA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAAGCAGCTCGAAGGTTTaGCCAGAAAAGCCCACATTT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSSSKV*PEKPTF
Trigger: AAATGTGGGCTTTTCTGGGCAAACCTTCGAGCTGCT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTTCTTCTGGCAGCTCTaGAGCATCACCCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGFFWQL*SITLCC
Trigger: ACAGCAGAGGGTGATGCTCCAGAGCTGCCAGAAGAA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACACATGTTGGAGCAGTTaGTCATCAGTTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNTCWSS*SSVPFL
Trigger: AAGAAAGGGAACTGATGACCAACTGCTCCAACATGT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTTCTTAGAGACATGTTaGAGCAGTTGGTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLFLETC*SSWSSV
Trigger: AACTGATGACCAACTGCTCCAACATGTCTCTAAGAA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTTGTTGTGTTTAAGATaGGCAGGCTACCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLLLCLR*AGYLLH
Trigger: ATGAAGAAGGTAGCCTGCCCATCTTAAACACAACAA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCAGGGCAGATCAAAGTaGAGACAGCAGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGQGRSK*RQQKAT
Trigger: TGTGGCCTTCTGCTGTCTCCACTTTGATCTGCCCTG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTATGAAATAAATGCGTaGAATCGGACATTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDYEINA*NRTFLL
Trigger: CAAGAGAAATGTCCGATTCCACGCATTTATTTCATA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGACTTCCCAAGGACTGTaGGATTTTATAGACAATCTG +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLTSQGL*DFIDNL
Trigger: CAGATTGTCTATAAAATCCCACAGTCCTTGGGAAGT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCATGTTGGCCAGGATaGTCTCCATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGPCWPG*SPSLDL
Trigger: GAGGTCAAGAGATGGAGACCATCCTGGCCAACATGG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCTGAAAGTGTTCCACTaGTGTATGCCAAACAAATTG +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNLKVFH*CMPNKL
Trigger: CAATTTGTTTGGCATACATCAGTGGAACACTTTCAG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAGTCACATTTCGGATCTaGAAGTGTTCCACTGATGTA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTVTFRI*KCSTDV
Trigger: TACATCAGTGGAACACTTTCAGATCCGAAATGTGAC...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTATTGCCATTCAAAATaGGAGTTTTCAAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLYCHSK*EFSSEA
Trigger: TGCCTCACTTGAAAACTCTCATTTTGAATGGCAATA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATTTTGGGCAAGCACCTaGAGACAGAATCAGACAATT +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQFWAST*RQNQTI
Trigger: AATTGTCTGATTCTGTCTTCAGGTGCTTGCCCAAAA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACGTAAGGCCATCAGATaGATAGTCTCTTTAGGTACA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQRKAIR*IVSLGT
Trigger: TGTACCTAAAGAGACTATTCATCTGATGGCCTTACG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAGAAAGTCTACTGAAATaGCTGCATCCAGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKESLLK*LHPGRS
Trigger: TGATCTCCCTGGATGCAGTCATTTCAGTAGACTTTC...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAGAACTGAAAGTCTACTaGAATGACTGCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKELKVY*NDCIQG
Trigger: TCCCTGGATGCAGTCATTTCAGTAGACTTTCAGTTC...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTACTTCCTGGCAGCTCTaGACAAAATCCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGTSWQL*TKSRDG
Trigger: CCCATCTCTGGATTTTGTTCAGAGCTGCCAGGAAGT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGATCATGTTCACTGTATaGAATAAATGCGTGGAATCG +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLIMFTV*NKCVES
Trigger: CGATTCCACGCATTTATTTCATACAGTGAACATGAT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCTTCATTTAACTCTGTaGATGTCTGCAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLLHLTL*MSAVHT
Trigger: TGTATGAACTGCAGACATTCACAGAGTTAAATGAAG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCTGGAGCCAATATCTaGCTTTCAACACTTACCTTA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQPGANI*LSTLTL
Trigger: TAAGGTAAGTGTTGAAAGTCAGATATTGGCTCCAGG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR GCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATGGAGCATCACCCTCTaGTGTCATAACAATACTACA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTWSITL*CHNNTT
Trigger: TGTAGTATTGTTATGACAGCAGAGGGTGATGCTCCA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCAAAACCCTGTATATTaGGTCTTCGACTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNQNPVY*VFDLIS
Trigger: TGAGATCAAGTCGAAGACCCAATATACAGGGTTTTG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTGTTGTGTTTAAGATaGGCAGGCTACCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNLLCLR*AGYLLH
Trigger: ATGAAGAAGGTAGCCTGCCCATCTTAAACACAACAA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAATTTACGCCTATCCTTaGGCCATTCCAAGTATGCTT +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTIYAYP*AIPSML
Trigger: AAGCATACTTGGAATGGCCCAAGGATAGGCGTAAAT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACACTTCCCAAGGACTGTaGGATTTTATAGACAATCTG +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNTSQGL*DFIDNL
Trigger: CAGATTGTCTATAAAATCCCACAGTCCTTGGGAAGT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTCCCAACAGTGTATGTaGTCCCCAACTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGSQQCM*SPTSQG
Trigger: TCCTTGGGAAGTTGGGGACCACATACACTGTTGGGA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACGATATAGAAAGTCCCTaGAGCCAATATCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNDIESP*SQYLTF
Trigger: GAAAGTCAGATATTGGCTCCAGGGACTTTCTATATC...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTGAAAGTGTTCCACTaGTGTATGCCAAACAAATTG +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQLKVFH*CMPNKL
Trigger: CAATTTGTTTGGCATACATCAGTGGAACACTTTCAG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAATGAGAGTTTTCAAGTaGGGCAGTTGGATAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTMRVFK*GSWIVL
Trigger: AAGAACTATCCAACTGCCTCACTTGAAAACTCTCAT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATGAGAGTTTTCAAGTaGGGCAGTTGGATAGTTCTT +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQMRVFK*GSWIVL
Trigger: AAGAACTATCCAACTGCCTCACTTGAAAACTCTCAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTGTTGTAATAGATTTTaGCTCAGATCCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNCCNRF*LRSKCS
Trigger: GGAACACTTGGATCTGAGTCAAAATCTATTACAACA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCACAGTTTCTGGCCATaGGCAATTTTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNHSFWP*AIFIIF
Trigger: AAAAATGATGAAAATTGCTCATGGCCAGAAACTGTG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAATGACAGATTCATATTaGCCACAGTTTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKMTDSY*PQFLAM
Trigger: CATGGCCAGAAACTGTGGTCAATATGAATCTGTCAT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATTTTGGGCAAGCACCTaGAGACAGAATCAGACAATT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKFWAST*RQNQTI
Trigger: AATTGTCTGATTCTGTCTTCAGGTGCTTGCCCAAAA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACGTAAGGCCATCAGATaGATAGTCTCTTTAGGTACA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKRKAIR*IVSLGT
Trigger: TGTACCTAAAGAGACTATTCATCTGATGGCCTTACG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAACCATCCAACCATCATaGCCTCTGAATATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQTIQPS*PLNMFQ
Trigger: TTGAAACATATTCAGAGGTCATGATGGTTGGATGGT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATCGGACATTTCTCTTaGGTTGTTCTTGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQIGHFS*VVLGLF
Trigger: AAACAACCCAAGAACAACTCAAGAGAAATGTCCGAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAATCGGACATTTCTCTTaGGTTGTTCTTGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTIGHFS*VVLGLF
Trigger: AAACAACCCAAGAACAACTCAAGAGAAATGTCCGAT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACATCATGTTCACTGTATaGAATAAATGCGTGGAATCG +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNIMFTV*NKCVES
Trigger: CGATTCCACGCATTTATTTCATACAGTGAACATGAT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCTTCATTTAACTCTGTaGATGTCTGCAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNLHLTL*MSAVHT
Trigger: TGTATGAACTGCAGACATTCACAGAGTTAAATGAAG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATGGAGCATCACCCTCTaGTGTCATAACAATACTACA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKWSITL*CHNNTT
Trigger: TGTAGTATTGTTATGACAGCAGAGGGTGATGCTCCA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATCAACAGAGCTGTGTTaGAAGATAATTCGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSTELC*KIIRGD
Trigger: ATCTCCACGAATTATCTTGCAACACAGCTCTGTTGA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR GCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTACAAGAGTGAGCCACTaGACCTGGCCACATTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGTRVSH*TWPHFS
Trigger: TGAAAAATGTGGCCAGGTGCAGTGGCTCACTCTTGT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATGTCTTCAGGTTGGTaGCAAAAGCAATCTGGATTA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQMSSGW*QKQSGL
Trigger: TAATCCAGATTGCTTTTGCCACCAACCTGAAGACAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACAGCATAATGGACCTTTaGTTTAAGAACTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNSIMDL*FKNCIV
Trigger: GACAATGCAGTTCTTAAACCAAAGGTCCATTATGCT...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACAAAACCCTGTATATTaGGTCTTCGACTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTQNPVY*VFDLIS
Trigger: TGAGATCAAGTCGAAGACCCAATATACAGGGTTTTG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAACATGTTGGAGCAGTTaGTCATCAGTTCCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKTCWSS*SSVPFL
Trigger: AAGAAAGGGAACTGATGACCAACTGCTCCAACATGT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATTCTTAGAGACATGTTaGAGCAGTTGGTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTFLETC*SSWSSV
Trigger: AACTGATGACCAACTGCTCCAACATGTCTCTAAGAA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTCAGTTTATGATACCTaGTGGGAATGCAATAGAATG +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNSVYDT*WECNRM
Trigger: CATTCTATTGCATTCCCACCAGGTATCATAAACTGA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAATTTACGCCTATCCTTaGGCCATTCCAAGTATGCTT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKIYAYP*AIPSML
Trigger: AAGCATACTTGGAATGGCCCAAGGATAGGCGTAAAT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAACTTCCCAAGGACTGTaGGATTTTATAGACAATCTG +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTTSQGL*DFIDNL
Trigger: CAGATTGTCTATAAAATCCCACAGTCCTTGGGAAGT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGGATTATAAACAATCCTaGGATGAACACCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLDYKQS*DEHLFP
Trigger: TGGAAAAAGGTGTTCATCCCAGGATTGTTTATAATC...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATATTGCCATTCAAAATaGGAGTTTTCAAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTYCHSK*EFSSEA
Trigger: TGCCTCACTTGAAAACTCTCATTTTGAATGGCAATA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATATTGCCATTCAAAATaGGAGTTTTCAAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQYCHSK*EFSSEA
Trigger: TGCCTCACTTGAAAACTCTCATTTTGAATGGCAATA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACACAGTTTCTGGCCATaGGCAATTTTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTHSFWP*AIFIIF
Trigger: AAAAATGATGAAAATTGCTCATGGCCAGAAACTGTG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTGAACTGAAAGTCTACTaGAATGACTGCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGELKVY*NDCIQG
Trigger: TCCCTGGATGCAGTCATTTCAGTAGACTTTCAGTTC...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAACCATCCAACCATCATaGCCTCTGAATATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKTIQPS*PLNMFQ
Trigger: TTGAAACATATTCAGAGGTCATGATGGTTGGATGGT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCATGTTTGTGTGCATTaGCCTAGCATCCTGAGATAC +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGHVCVH*PSILRY
Trigger: GTATCTCAGGATGCTAGGTCAATGCACACAAACATG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAAGCATAATGGACCTTTaGTTTAAGAACTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSIMDL*FKNCIV
Trigger: GACAATGCAGTTCTTAAACCAAAGGTCCATTATGCT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTTGATCTCAGAGCATTaGCTGAGAAGTCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGLISEH*LRSLQA
Trigger: AGCTTGGAGACTTCTCAGCCAATGCTCTGAGATCAA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATTCTTAGAGACATGTTaGAGCAGTTGGTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKFLETC*SSWSSV
Trigger: AACTGATGACCAACTGCTCCAACATGTCTCTAAGAA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATTGTTGTGTTTAAGATaGGCAGGCTACCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKLLCLR*AGYLLH
Trigger: ATGAAGAAGGTAGCCTGCCCATCTTAAACACAACAA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATCAGTTTATGATACCTaGTGGGAATGCAATAGAATG +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSVYDT*WECNRM
Trigger: CATTCTATTGCATTCCCACCAGGTATCATAAACTGA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAACTTCCCAAGGACTGTaGGATTTTATAGACAATCTG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKTSQGL*DFIDNL
Trigger: CAGATTGTCTATAAAATCCCACAGTCCTTGGGAAGT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCACTTACCTTACAGATaGAAGTTTCAAAACAGGAAA +
Preference number: 4 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNHLPYR*KFQNRK
Trigger: TTTCCTGTTTTGAAACTTCCATCTGTAAGGTAAGTG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTGTCACATTTCGGATCTaGAAGTGTTCCACTGATGTA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGVTFRI*KCSTDV
Trigger: TACATCAGTGGAACACTTTCAGATCCGAAATGTGAC...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATGTTGTAATAGATTTTaGCTCAGATCCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKCCNRF*LRSKCS
Trigger: GGAACACTTGGATCTGAGTCAAAATCTATTACAACA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTATGACAGATTCATATTaGCCACAGTTTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGMTDSY*PQFLAM
Trigger: CATGGCCAGAAACTGTGGTCAATATGAATCTGTCAT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTTTTGGGCAAGCACCTaGAGACAGAATCAGACAATT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGFWAST*RQNQTI
Trigger: AATTGTCTGATTCTGTCTTCAGGTGCTTGCCCAAAA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCGTAAGGCCATCAGATaGATAGTCTCTTTAGGTACA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGRKAIR*IVSLGT
Trigger: TGTACCTAAAGAGACTATTCATCTGATGGCCTTACG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTAGAGCTTTCAGTTTATaGTACCTGGTGGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGRAFSL*YLVGMQ
Trigger: TTGCATTCCCACCAGGTATCATAAACTGAAAGCTCT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAAGCATAATGGACCTTTaGTTTAAGAACTGCATTGTC +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSIMDL*FKNCIV
Trigger: GACAATGCAGTTCTTAAACCAAAGGTCCATTATGCT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATCAGTTTATGATACCTaGTGGGAATGCAATAGAATG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSVYDT*WECNRM
Trigger: CATTCTATTGCATTCCCACCAGGTATCATAAACTGA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTATTTACGCCTATCCTTaGGCCATTCCAAGTATGCTT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGIYAYP*AIPSML
Trigger: AAGCATACTTGGAATGGCCCAAGGATAGGCGTAAAT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAGATTATAAACAATCCTaGGATGAACACCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQDYKQS*DEHLFP
Trigger: TGGAAAAAGGTGTTCATCCCAGGATTGTTTATAATC...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCTGAAAGTGTTCCACTaGTGTATGCCAAACAAATTG +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGLKVFH*CMPNKL
Trigger: CAATTTGTTTGGCATACATCAGTGGAACACTTTCAG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTATGAGAGTTTTCAAGTaGGGCAGTTGGATAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGMRVFK*GSWIVL
Trigger: AAGAACTATCCAACTGCCTCACTTGAAAACTCTCAT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTACCATCCAACCATCATaGCCTCTGAATATGTTTCAA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGTIQPS*PLNMFQ
Trigger: TTGAAACATATTCAGAGGTCATGATGGTTGGATGGT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATATGAAATAAATGCGTaGAATCGGACATTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKYEINA*NRTFLL
Trigger: CAAGAGAAATGTCCGATTCCACGCATTTATTTCATA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTACTTCCCAAGGACTGTaGGATTTTATAGACAATCTG +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGTSQGL*DFIDNL
Trigger: CAGATTGTCTATAAAATCCCACAGTCCTTGGGAAGT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTATTGCCATTCAAAATaGGAGTTTTCAAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGYCHSK*EFSSEA
Trigger: TGCCTCACTTGAAAACTCTCATTTTGAATGGCAATA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTGTTGTAATAGATTTTaGCTCAGATCCAAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGCCNRF*LRSKCS
Trigger: GGAACACTTGGATCTGAGTCAAAATCTATTACAACA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCACAGTTTCTGGCCATaGGCAATTTTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGHSFWP*AIFIIF
Trigger: AAAAATGATGAAAATTGCTCATGGCCAGAAACTGTG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR TCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCTTCATTTAACTCTGTaGATGTCTGCAGTTCATACA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGLHLTL*MSAVHT
Trigger: TGTATGAACTGCAGACATTCACAGAGTTAAATGAAG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTATGAAATAAATGCGTaGAATCGGACATTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGYEINA*NRTFLL
Trigger: CAAGAGAAATGTCCGATTCCACGCATTTATTTCATA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CCA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTGATTATAAACAATCCTaGGATGAACACCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGDYKQS*DEHLFP
Trigger: TGGAAAAAGGTGTTCATCCCAGGATTGTTTATAATC...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGCGTGGGTCACCCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLRGSPT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCAAGGTGGGTGACCCACG...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACCGTGGGTCACCCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNRGSPT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCAAGGTGGGTGACCCACG...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 90 bp GGGTCAAGTCTGCGGGAACCTTTCTTAGAGACATGTTGGAGCAGTTaGTCATCAGTTCCCTTTCTTCTGGCAGCTCTGGAGCATCACCCT +
Preference number: 5 (lower is better)
Translates to: GSSLREPFLETCWSS*SSVPFLLAALEHHP
Trigger: AGGGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATGTCTCTAAGAAAGGTTCCCGCAGACTTGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 90 bp TTGTGGCTGGGGTCAAGTCTGCGGGAACCTTTCTTAGAGACATGTTaGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGCAGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LWLGSSLREPFLETC*SSWSSVPFLLAALE
Trigger: CTCCAGAGCTGCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATGTCTCTAAGAAAGGTTCCCGCAGACTTGACCCCAGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATCTGAATTCCCACGGCTaGCACTCTCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDLNSHG*HSLSRA
Trigger: AGCTCTGCTGAGAGAGTGCAAGCCGTGGGAATTCAG...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS CCA 90 bp GCTCAAAACCCTGTATATTGGGTCTTCGACTTGATCTCAGAGCATTaGCTGAGAAGTCTCCAAGCTGGCTACTGTGCCATGTCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: AQNPVYWVFDLISEH*LRSLQAGYCAMSPL
Trigger: CAACGGAGACATGGCACAGTAGCCAGCTTGGAGACTTCTCAGCCAATGCTCTGAGATCAAGTCGAAGACCCAATATACAGGGTTTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTGCGTGGATGATTCGTaGACACGGTCAGAATTGGCT +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDCVDDS*TRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCGTGGGTCACCCACCTaGGCCTCCCATAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGRGSPT*ASHSAG
Trigger: CCCAGCACTATGGGAGGCCAAGGTGGGTGACCCACG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 90 bp CATGTTGGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGCAGCTCTaGAGCATCACCCTCTGCTGTCATAACAATACTTACAGATGGAAG +
Preference number: 5 (lower is better)
Translates to: HVGAVGHQFPFFWQL*SITLCCHNNTYRWK
Trigger: CTTCCATCTGTAAGTATTGTTATGACAGCAGAGGGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502321.5
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTGCGTGGATGATTCGTaGACACGGTCAGAATTGGCT +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLCVDDS*TRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGATAAATCCAGTGTCGTaGTGGCTGGGGTCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLINPVS*WLGSSL
Trigger: CAGACTTGACCCCAGCCACAACGACACTGGATTTAT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACAAAACCCCCACGGCTaGCACTCTCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKQNPHG*HSLSRA
Trigger: AGCTCTGCTGAGAGAGTGCAAGCCGTGGGGGTTTTG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361424.6
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTCAAAACCCTGTATATaGGGTCTTCGACTTGATCTC +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDSKPCI*GLRLDL
Trigger: GAGATCAAGTCGAAGACCCAATATACAGGGTTTTGA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTGTTCCAAGGGTGTGTaGTTAGCAAAGCAACTTACT +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDCSKGV*LAKQLT
Trigger: AGTAAGTTGCTTTGCTAACAACACACCCTTGGAACA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATATCAACAGAGCTGTGTaGCAAGATAATTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDINRAV*QDNSWR
Trigger: TCTCCACGAATTATCTTGCAACACAGCTCTGTTGAT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATGCGTGGATGATTCGTaGACACGGTCAGAATTGGCT +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQCVDDS*TRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATAAATCCAGTGTCGTaGTGGCTGGGGTCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQINPVS*WLGSSL
Trigger: CAGACTTGACCCCAGCCACAACGACACTGGATTTAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATTATGACAGATTCATATaGACCACAGTTTCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDYDRFI*TTVSGH
Trigger: ATGGCCAGAAACTGTGGTCAATATGAATCTGTCATA...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACTCTCACATCTCCTTTaGATAGCCCCACGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKLSHLL*IAPRLA
Trigger: TGCAAGCCGTGGGGCTATCAAAAGGAGATGTGAGAG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622002.4
CDS GCA 90 bp GGATTCTCAGAGAGGAGAAGCATAATGGACCTTTGGTTTAAGAACTaGATTGTCAGGCCAGACTCAATACCCTCTCTCACATCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: GFSERRSIMDLWFKN*IVRPDSIPSLTSPF
Trigger: AAAAGGAGATGTGAGAGAGGGTATTGAGTCTGGCCTGACAATGCAGTTCTTAAACCAAAGGTCCATTATGCTTCTCCTCTCTGAGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000507953.1
ENST00000622002.4
CDS CCA 90 bp CATGTTGGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGCAGCTCTaGAGCATCACCCTCTGCTGTCATAACAATACTACAAAATATGTA +
Preference number: 5 (lower is better)
Translates to: HVGAVGHQFPFFWQL*SITLCCHNNTTKYV
Trigger: TACATATTTTGTAGTATTGTTATGACAGCAGAGGGTGATGCTCCAGAGCTGCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACGGTTTAAGAACTGCATaGTCAGGCCAGACTCAATAC +
Preference number: 5 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNGLRTA*SGQTQY
Trigger: GTATTGAGTCTGGCCTGACAATGCAGTTCTTAAACC...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATATTGGGTCTTCGACTaGATCTCAGAGCATTGGCTG +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQYWVFD*ISEHWL
Trigger: CAGCCAATGCTCTGAGATCAAGTCGAAGACCCAATA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATATTGGGTCTTCGACTaGATCTCAGAGCATTGGCTG +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTYWVFD*ISEHWL
Trigger: CAGCCAATGCTCTGAGATCAAGTCGAAGACCCAATA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTTTCTTAGAGACATGTaGGAGCAGTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLFLRDM*EQLVIS
Trigger: ACTGATGACCAACTGCTCCAACATGTCTCTAAGAAA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAATAAATCCAGTGTCGTaGTGGCTGGGGTCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKINPVS*WLGSSL
Trigger: CAGACTTGACCCCAGCCACAACGACACTGGATTTAT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAATGTACATCCCAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTGGGATAGTGTCTCCAGTTTATaGCCATTCAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: QCTSQQCMWSPTSQGLWDSVSSL*PFKMRV
Trigger: AACTCTCATTTTGAATGGCAATAAACTGGAGACACT...ATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTGTTCCAAGGGTGTGTaGTTAGCAAAGCAACTTACT +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLCSKGV*LAKQLT
Trigger: AGTAAGTTGCTTTGCTAACAACACACCCTTGGAACA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGATCAACAGAGCTGTGTaGCAAGATAATTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLINRAV*QDNSWR
Trigger: TCTCCACGAATTATCTTGCAACACAGCTCTGTTGAT...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTCTCTTGAGTTGTTCTaGGGTTGTTTTCCTAACCCT +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLSLELF*GCFPNP
Trigger: AGGGTTAGGAAAACAACCCAAGAACAACTCAAGAGA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACATTTACGCCTATCCTaGGGCCATTCCAAGTATGCT +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQHLRLS*GHSKYA
Trigger: AGCATACTTGGAATGGCCCAAGGATAGGCGTAAATG...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACATTTACGCCTATCCTaGGGCCATTCCAAGTATGCT +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTHLRLS*GHSKYA
Trigger: AGCATACTTGGAATGGCCCAAGGATAGGCGTAAATG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACACTATATGTCTTCAGGTaGGTGGCAAAAGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTLYVFR*VAKAIW
Trigger: CCAGATTGCTTTTGCCACCAACCTGAAGACATATAG...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAGGTTTAAGAACTGCATaGTCAGGCCAGACTCAATAC +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTGLRTA*SGQTQY
Trigger: GTATTGAGTCTGGCCTGACAATGCAGTTCTTAAACC...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATATTGGGTCTTCGACTaGATCTCAGAGCATTGGCTG +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKYWVFD*ISEHWL
Trigger: CAGCCAATGCTCTGAGATCAAGTCGAAGACCCAATA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CAA 90 bp CAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACCACTGTATGACAGATTCATATaGACCACAGTTTCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QHRNQMLPVIQPPRPKPLYDRFI*TTVSGH
Trigger: ATGGCCAGAAACTGTGGTCAATATGAATCTGTCATA...CAGTGGTTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTGCGTGGATGATTCGTaGACACGGTCAGAATTGGCT +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGCVDDS*TRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACTATATGTCTTCAGGTaGGTGGCAAAAGCAATCTGG +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKLYVFR*VAKAIW
Trigger: CCAGATTGCTTTTGCCACCAACCTGAAGACATATAG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAGGTTTAAGAACTGCATaGTCAGGCCAGACTCAATAC +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKGLRTA*SGQTQY
Trigger: GTATTGAGTCTGGCCTGACAATGCAGTTCTTAAACC...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATCAAAACCCTGTATATaGGGTCTTCGACTTGATCTC +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSKPCI*GLRLDL
Trigger: GAGATCAAGTCGAAGACCCAATATACAGGGTTTTGA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATTTCTTAGAGACATGTaGGAGCAGTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTFLRDM*EQLVIS
Trigger: ACTGATGACCAACTGCTCCAACATGTCTCTAAGAAA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATTTCTTAGAGACATGTaGGAGCAGTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQFLRDM*EQLVIS
Trigger: ACTGATGACCAACTGCTCCAACATGTCTCTAAGAAA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTATAAATCCAGTGTCGTaGTGGCTGGGGTCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGINPVS*WLGSSL
Trigger: CAGACTTGACCCCAGCCACAACGACACTGGATTTAT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATGTTCCAAGGGTGTGTaGTTAGCAAAGCAACTTACT +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTCSKGV*LAKQLT
Trigger: AGTAAGTTGCTTTGCTAACAACACACCCTTGGAACA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATGTTCCAAGGGTGTGTaGTTAGCAAAGCAACTTACT +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQCSKGV*LAKQLT
Trigger: AGTAAGTTGCTTTGCTAACAACACACCCTTGGAACA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACTATGACAGATTCATATaGACCACAGTTTCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNYDRFI*TTVSGH
Trigger: ATGGCCAGAAACTGTGGTCAATATGAATCTGTCATA...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAATCAACAGAGCTGTGTaGCAAGATAATTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQINRAV*QDNSWR
Trigger: TCTCCACGAATTATCTTGCAACACAGCTCTGTTGAT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAATCAACAGAGCTGTGTaGCAAGATAATTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTINRAV*QDNSWR
Trigger: TCTCCACGAATTATCTTGCAACACAGCTCTGTTGAT...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAATCTCTTGAGTTGTTCTaGGGTTGTTTTCCTAACCCT +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSLELF*GCFPNP
Trigger: AGGGTTAGGAAAACAACCCAAGAACAACTCAAGAGA...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACATCTCTTGAGTTGTTCTaGGGTTGTTTTCCTAACCCT +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTSLELF*GCFPNP
Trigger: AGGGTTAGGAAAACAACCCAAGAACAACTCAAGAGA...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAACTCTCACATCTCCTTTaGATAGCCTTACAGATGGAA +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKLSHLL*IALQME
Trigger: TTCCATCTGTAAGGCTATCAAAAGGAGATGTGAGAG...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308973.9
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATCAAAACCCTGTATATaGGGTCTTCGACTTGATCTC +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSKPCI*GLRLDL
Trigger: GAGATCAAGTCGAAGACCCAATATACAGGGTTTTGA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATTTCTTAGAGACATGTaGGAGCAGTTGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKFLRDM*EQLVIS
Trigger: ACTGATGACCAACTGCTCCAACATGTCTCTAAGAAA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp GCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAACGTGGCATTTGTGCATTaGATATTGTCAGGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: AIIKVVSMYIPTVYVVPNVAFVH*ILSGFL
Trigger: TAGAAAACCTGACAATATCAAATGCACAAATGCCAC...GTTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAATCTCTTGAGTTGTTCTaGGGTTGTTTTCCTAACCCT +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSLELF*GCFPNP
Trigger: AGGGTTAGGAAAACAACCCAAGAACAACTCAAGAGA...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCATTTACGCCTATCCTaGGGCCATTCCAAGTATGCT +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGHLRLS*GHSKYA
Trigger: AGCATACTTGGAATGGCCCAAGGATAGGCGTAAATG...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS TCA 90 bp ATGGTGACAATCAACAGAGCTGTGTTGCAAGATAATTCGTGGAGATaGACGTCTTTTAACCTAGTTCCCCTTAGGTTTAAAGGGTATTCA +
Preference number: 5 (lower is better)
Translates to: MVTINRAVLQDNSWR*TSFNLVPLRFKGYS
Trigger: TGAATACCCTTTAAACCTAAGGGGAACTAGGTTAAAAGACGTTCATCTCCACGAATTATCTTGCAACACAGCTCTGTTGATTGTCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAGTGGCATTTGTGCATTaGATATTGTCAGGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQVAFVH*ILSGFL
Trigger: TAGAAAACCTGACAATATCAAATGCACAAATGCCAC...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp CCAACCTCCCAGACCCAAACCACTGTTACTACATCTGGTATAGATTTCTTTACAGTGGCATTTGTGCATTaGATATTGTCAGGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: PTSQTQTTVTTSGIDFFTVAFVH*ILSGFL
Trigger: TAGAAAACCTGACAATATCAAATGCACAAATGCCAC...TGTAAAGAAATCTATACCAGATGTAGTAACAGTGGTTTGGGTCTGGGAGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTCCCCAAAGTGTCTCCAGTTTATaGCCATTCAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: CHHKGCINVHPNSVCGPQSVSSL*PFKMRV
Trigger: AACTCTCATTTTGAATGGCAATAAACTGGAGACACT...TTGGGGACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAAATCGGACATTTCTCTaGAGTTGTTCTTGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKNRTFL*SCSWVV
Trigger: AACAACCCAAGAACAACTCAAGAGAAATGTCCGATT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS CCA 90 bp AGGAGTTACCCCTCAATTTTTGTATTTGTGGATATAGAAAGTCCCTaGAGCCAATATCTGACTTTCAACACTTACCTTACAGATGGAAGT +
Preference number: 5 (lower is better)
Translates to: RSYPSIFVFVDIESP*SQYLTFNTYLTDGS
Trigger: ACTTCCATCTGTAAGGTAAGTGTTGAAAGTCAGATATTGGCTCCAGGGACTTTCTATATCCACAAATACAAAAATTGAGGGGTAACTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAGTGGCATTTGTGCATTaGATATTGTCAGGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKVAFVH*ILSGFL
Trigger: TAGAAAACCTGACAATATCAAATGCACAAATGCCAC...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp AATACACAACATAGAAATCAAATGCTCCCTGTAATCCAACCTCCCAGACCCAAAAGTGTCTCCAGTTTATaGCCATTCAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: NTQHRNQMLPVIQPPRPKSVSSL*PFKMRV
Trigger: AACTCTCATTTTGAATGGCAATAAACTGGAGACACT...TTTGGGTCTGGGAGGTTGGATTACAGGGAGCATTTGATTTCTATGTTGTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTCTCTTGAGTTGTTCTaGGGTTGTTTTCCTAACCCT +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGSLELF*GCFPNP
Trigger: AGGGTTAGGAAAACAACCCAAGAACAACTCAAGAGA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 90 bp AAGTCCCTGGAGCCAATATCTGACTTTCAACACTTACCTTACAGATaGAAGTTTCAAAACAGGAAACAAATAGAATTATTCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: KSLEPISDFQHLPYR*KFQNRKQIELFLSF
Trigger: GAAGGACAGGAATAATTCTATTTGTTTCCTGTTTTGAAACTTCCATCTGTAAGGTAAGTGTTGAAAGTCAGATATTGGCTCCAGGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506111.1
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTTATGACAGATTCATATaGACCACAGTTTCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGYDRFI*TTVSGH
Trigger: ATGGCCAGAAACTGTGGTCAATATGAATCTGTCATA...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTAATCGGACATTTCTCTaGAGTTGTTCTTGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGNRTFL*SCSWVV
Trigger: AACAACCCAAGAACAACTCAAGAGAAATGTCCGATT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS TCA 90 bp GAGTCTCATTGTATTTCCAAGGATTTTACCACTTATTTCCTCATATaGATGATGAAGATGAGCTCAAAACCCTGTATATTGGGTCTTCGA +
Preference number: 5 (lower is better)
Translates to: ESHCISKDFTTYFLI*MMKMSSKPCILGLR
Trigger: TCGAAGACCCAATATACAGGGTTTTGAGCTCATCTTCATCATTCATATGAGGAAATAAGTGGTAAAATCCTTGGAAATACAATGAGACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS-3UTR CAA 90 bp TCAAATTGCCATCATAAAGGTTGTATCAATGTACATCCCAACAGTGTATGTGGTAGTGTCTCCAGTTTATaGCCATTCAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: SNCHHKGCINVHPNSVCGSVSSL*PFKMRV
Trigger: AACTCTCATTTTGAATGGCAATAAACTGGAGACACT...ACCACATACACTGTTGGGATGTACATTGATACAACCTTTATGATGGCAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS TCA 90 bp GAGTCTCATTGTATTTCCAAGGATTTTACCACTTATTTCCTCATATaGATGATGAAGATGAGCTCAAAACCCTTACAGATGGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: ESHCISKDFTTYFLI*MMKMSSKPLQMEVS
Trigger: TGAAACTTCCATCTGTAAGGGTTTTGAGCTCATCTTCATCATTCATATGAGGAAATAAGTGGTAAAATCCTTGGAAATACAATGAGACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508334.1
ENST00000613579.4
CDS CCA 90 bp ATAGAATTATTCCTGTCCTTCTGCCTCTATATGTCTTCAGGTTGGTaGCAAAAGCAATCTGGATTACTGCCAAATAATAGTATTAATGTT +
Preference number: 5 (lower is better)
Translates to: IELFLSFCLYMSSGW*QKQSGLLPNNSINV
Trigger: AACATTAATACTATTATTTGGCAGTAATCCAGATTGCTTTTGCCACCAACCTGAAGACATATAGAGGCAGAAGGACAGGAATAATTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000502321.5
ENST00000507953.1
ENST00000613579.4
CDS GCA 72 bp CCCCCACGGCTTGCACTCTCTCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACACGGTCAGAATTGGCT +
Preference number: 6 (lower is better)
Translates to: PPRLALSQQSCR*VDDSLTRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361424.6
CDS GCA 72 bp GCCCCACGGCTTGCACTCTCTCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACACGGTCAGAATTGGCT +
Preference number: 6 (lower is better)
Translates to: APRLALSQQSCR*VDDSLTRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622002.4
CDS GCA 72 bp ACCCCACGGCTTGCACTCTCTCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACACGGTCAGAATTGGCT +
Preference number: 6 (lower is better)
Translates to: TPRLALSQQSCR*VDDSLTRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507953.1
CDS GCA 72 bp TTCCCACGGCTTGCACTCTCTCAGCAGAGCTGCAGGTaGGTGGATGATTCGTTGACACGGTCAGAATTGGCT +
Preference number: 6 (lower is better)
Translates to: FPRLALSQQSCR*VDDSLTRSELA
Trigger: AGCCAATTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308973.9
ENST00000613579.4
CDS GCA 72 bp GCTGAATTCCCACGGCTTGCACTCTCTCAGCAGAGCTaGAGGTGCGTGGATGATTCGTTGACACGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: AEFPRLALSQQS*RCVDDSLTRSE
Trigger: TTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGAATTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000502321.5
ENST00000613579.4
CDS GCA 72 bp TCAAAACCCCCACGGCTTGCACTCTCTCAGCAGAGCTaGAGGTGCGTGGATGATTCGTTGACACGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: SKPPRLALSQQS*RCVDDSLTRSE
Trigger: TTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGGTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361424.6
CDS GCA 72 bp TTGATAGCCCCACGGCTTGCACTCTCTCAGCAGAGCTaGAGGTGCGTGGATGATTCGTTGACACGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: LIAPRLALSQQS*RCVDDSLTRSE
Trigger: TTCTGACCGTGTCAACGAATCATCCACGCACCTGCAGCTCTGCTGAGAGAGTGCAAGCCGTGGGGCTATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622002.4
CDS CAA 90 bp GTTGTGGCTGGGGTCAAGTCTGCGGGAACCTTTCTTAGAGACATGTaGGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGCAGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: VVAGVKSAGTFLRDM*EQLVISSLSSGSSG
Trigger: TCCAGAGCTGCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATGTCTCTAAGAAAGGTTCCCGCAGACTTGACCCCAGCCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CAA 72 bp GGGGTCAAGTCTGCGGGAACCTTTCTTAGAGACATGTaGGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: GVKSAGTFLRDM*EQLVISSLSSG
Trigger: GCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATGTCTCTAAGAAAGGTTCCCGCAGACTTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 72 bp CCTGTATATTGGGTCTTCGACTTGATCTCAGAGCATTaGCTGAGAAGTCTCCAAGCTGGCTACTGTGCCATG +
Preference number: 6 (lower is better)
Translates to: PVYWVFDLISEH*LRSLQAGYCAM
Trigger: CATGGCACAGTAGCCAGCTTGGAGACTTCTCAGCCAATGCTCTGAGATCAAGTCGAAGACCCAATATACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS CCA 72 bp GGGTCAAGTCTGCGGGAACCTTTCTTAGAGACATGTTaGAGCAGTTGGTCATCAGTTCCCTTTCTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: GSSLREPFLETC*SSWSSVPFLLA
Trigger: TGCCAGAAGAAAGGGAACTGATGACCAACTGCTCCAACATGTCTCTAAGAAAGGTTCCCGCAGACTTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CAA 90 bp AGCTCAAAACCCTGTATATTGGGTCTTCGACTTGATCTCAGAGCATaGGCTGAGAAGTCTCCAAGCTGGCTACTGTGCCATGTCTCCGTT +
Preference number: 6 (lower is better)
Translates to: SSKPCILGLRLDLRA*AEKSPSWLLCHVSV
Trigger: AACGGAGACATGGCACAGTAGCCAGCTTGGAGACTTCTCAGCCAATGCTCTGAGATCAAGTCGAAGACCCAATATACAGGGTTTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308973.9
ENST00000506111.1
ENST00000622002.4
CDS CCA 72 bp GAAAAAGGAGGTTATAGGATAAATCCAGTGTCGTTGTaGCTGGGGTCAAGTCTGCGGGAACCTTTCTTAGAG +
Preference number: 6 (lower is better)
Translates to: EKGGYRINPVSL*LGSSLREPFLE
Trigger: CTCTAAGAAAGGTTCCCGCAGACTTGACCCCAGCCACAACGACACTGGATTTATCCTATAACCTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CAA 72 bp GTTGAAAAAGGAGGTTATAGGATAAATCCAGTGTCGTaGTGGCTGGGGTCAAGTCTGCGGGAACCTTTCTTA +
Preference number: 6 (lower is better)
Translates to: VEKGGYRINPVS*WLGSSLREPFL
Trigger: TAAGAAAGGTTCCCGCAGACTTGACCCCAGCCACAACGACACTGGATTTATCCTATAACCTCCTTTTTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000502321.5
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS TCA 72 bp CTTCCCGCATTTAGAGTTTTAACTTCCTGGCAGCTCTaGACAAAATCCAGAGATGGGCTGAGAATGAAGTTC +
Preference number: 6 (lower is better)
Translates to: LPAFRVLTSWQL*TKSRDGLRMKF
Trigger: GAACTTCATTCTCAGCCCATCTCTGGATTTTGTTCAGAGCTGCCAGGAAGTTAAAACTCTAAATGCGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 72 bp CAACAGTGTATGTGGTCCCCAACTTCCCAAGGACTGTaGGATTTTATAGACAATCTGTTCTCATCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: QQCMWSPTSQGL*DFIDNLFSSER
Trigger: TCTCTCTGATGAGAACAGATTGTCTATAAAATCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000613579.4
ENST00000622002.4
CDS CAA 72 bp AAATGCGTGGAATCGGACATTTCTCTTGAGTTGTTCTaGGGTTGTTTTCCTAACCCTGTGCCATGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: KCVESDISLELF*GCFPNPVPCLC
Trigger: ACACAAACATGGCACAGGGTTAGGAAAACAACCCAAGAACAACTCAAGAGAAATGTCCGATTCCACGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308973.9
ENST00000361424.6
ENST00000506111.1
ENST00000508334.1
ENST00000613579.4
ENST00000622002.4
CDS CCA 72 bp TTCCTGTCCTTCTGCCTCTATATGTCTTCAGGTTGGTaGCAAAAGCAATCTGGATTACTGCCAAATAATAGT +
Preference number: 6 (lower is better)
Translates to: FLSFCLYMSSGW*QKQSGLLPNNS
Trigger: ACTATTATTTGGCAGTAATCCAGATTGCTTTTGCCACCAACCTGAAGACATATAGAGGCAGAAGGACAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308973.9
ENST00000502321.5
ENST00000507953.1
ENST00000613579.4