RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000171914

Ensembl transcript IDs: ENST00000467297.1, ENST00000472902.1, ENST00000474847.2, ENST00000489129.5, ENST00000494733.5, ENST00000559174.1, ENST00000559908.1, ENST00000561197.5, ENST00000561311.5, ENST00000561322.1, ENST00000636159.1

Found 1746 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTCCAGGCTCACCCGGGAGGGAGGTGGGCGGTTTCCAGCTAAGTaGCCAGCCTCTCAGGAACACTGTCTGTCCAGTTCAGCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: GSRLTREGGGRFPAK*PASQEHCLSSSARA
Trigger: GGCCCTGGCTGAACTGGACAGACAGTGTTCCTGAGAGGCTGGGCACTTAGCTGGAAACCGCCCACCTCCCTCCCGGGTGAGCCTGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp GGCAGCTGCCTCTGCAGCCGACCTGGAGGGACTGTGTTGACCGACTaGAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCC +
Preference number: 1 (lower is better)
Translates to: GSCLCSRPGGTVLTD*RANQELRNLPAQMA
Trigger: GGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCGGTCAACACAGTCCCTCCAGGTCGGCTGCAGAGGCAGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 90 bp GGAAGCACGTGTGCCCCTCCTCTCAGTGTCCGGCCAAGGCAGGCATaGGGTGTTGGATCAGCTCCACTCAAAGAGGGCGAGCCAAGAGTG +
Preference number: 1 (lower is better)
Translates to: GSTCAPPLSVRPRQA*GVGSAPLKEGEPRV
Trigger: CACTCTTGGCTCGCCCTCTTTGAGTGGAGCTGATCCAACACCTCATGCCTGCCTTGGCCGGACACTGAGAGGAGGGGCACACGTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 90 bp GTGTGCCCCTCCTCTCAGTGTCCGGCCAAGGCAGGCATGAGGTGTTaGATCAGCTCCACTCAAAGAGGGCGAGCCAAGAGTGTGCCAGCT +
Preference number: 1 (lower is better)
Translates to: VCPSSQCPAKAGMRC*ISSTQRGRAKSVPA
Trigger: AGCTGGCACACTCTTGGCTCGCCCTCTTTGAGTGGAGCTGATCCAACACCTCATGCCTGCCTTGGCCGGACACTGAGAGGAGGGGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp TCTGAGCATTGGGGTCTGACTCCTGAGTGTCTCTGGAAGCACGTGTaGCCCTCCTCTCAGTGTCCGGCCAAGGCAGGCATGAGGTGTTGG +
Preference number: 1 (lower is better)
Translates to: SEHWGLTPECLWKHV*PSSQCPAKAGMRCW
Trigger: CCAACACCTCATGCCTGCCTTGGCCGGACACTGAGAGGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 90 bp AGTACAGCCTGGGGCTACCTGGTCTGGACCTGTGCTGTGCAGTGGTaGGGAAATAAACTGGGCTCTGGTTACTGGGCTGGGGTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: STAWGYLVWTCAVQW*GNKLGSGYWAGVFQ
Trigger: CTGGAAGACCCCAGCCCAGTAACCAGAGCCCAGTTTATTTCCCCACCACTGCACAGCACAGGTCCAGACCAGGTAGCCCCAGGCTGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR CCA 90 bp ACACATTGTGACTCTGAGCATTGGGGTCTGACTCCTGAGTGTCTCTaGAAGCACGTGTGCCCCTCCTCTCAGTGTCCGGCCAAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: THCDSEHWGLTPECL*KHVCPSSQCPAKAG
Trigger: GCCTGCCTTGGCCGGACACTGAGAGGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACAATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp TTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTaGGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTT +
Preference number: 1 (lower is better)
Translates to: FTPWVSQCSRHGRRT*VTLPESTRVCVSGF
Trigger: AAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp GTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTaGCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: VGRTLYRVTSRSCSQ*RRDRDVRTSTQGSR
Trigger: CCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp CCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCATTCCACTaGCTGTCAACTGGGAGCCGTGGGTTTGTGTGGATGACTCTGTGT +
Preference number: 1 (lower is better)
Translates to: PAESPPWTLRRRAFH*LSTGSRGFVWMTLC
Trigger: ACACAGAGTCATCCACACAAACCCACGGCTCCCAGTTGACAGTCAGTGGAATGCTCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp GAGACCCAGCCTCGTGTTTTGTGGGATGAAGAGATGCAGACAAAGTaGCTCAGGTACACTGATGCTCCCTGGAGGGCTGGGAGGTGGGCT +
Preference number: 1 (lower is better)
Translates to: ETQPRVLWDEEMQTK*LRYTDAPWRAGRWA
Trigger: AGCCCACCTCCCAGCCCTCCAGGGAGCATCAGTGTACCTGAGTCACTTTGTCTGCATCTCTTCATCCCACAAAACACGAGGCTGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 90 bp CATGGGCTAGAGTCTGGTGAAACAAGATCGGGCAAGGTCGAAAGGTaGCATCTTCGGAGGACCAAAGCACCAACTTTCCCCCGTCAGTGG +
Preference number: 1 (lower is better)
Translates to: HGLESGETRSGKVER*HLRRTKAPTFPRQW
Trigger: CCACTGACGGGGGAAAGTTGGTGCTTTGGTCCTCCGAAGATGTCACCTTTCGACCTTGCCCGATCTTGTTTCACCAGACTCTAGCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp GTTACAGGAGGCCATGAACACATTGTGACTCTGAGCATTGGGGTCTaGCTCCTGAGTGTCTCTGGAAGCACGTGTGCCCCTCCTCTCAGT +
Preference number: 1 (lower is better)
Translates to: VTGGHEHIVTLSIGV*LLSVSGSTCAPPLS
Trigger: ACTGAGAGGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACAATGTGTTCATGGCCTCCTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp AGAGGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATaGAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAG +
Preference number: 1 (lower is better)
Translates to: RGVVGRTLYRVTSRS*SQCRRDRDVRTSTQ
Trigger: CTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR CCA 90 bp CCAGGAGCAGAGACCATGGCTTGCTCACCACTTTTGACCTGTGTCTaGTTCCTTGATGAGGTTTTGGCCTTGGCATCACTTTGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: PGAETMACSPLLTCV*FLDEVLALASLWRW
Trigger: CCACCTCCAAAGTGATGCCAAGGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCATGGTCTCTGCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 90 bp AGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATaGACCATGTCCAACTCCAGCTTCCGTCTTCTCCTGAGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: SHPPGVHTGLCFWLL*TMSNSSFRLLLRGR
Trigger: TCTTCCTCTCAGGAGAAGACGGAAGCTGGAGTTGGACATGGTTCATAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp ATGAGAAACCACCACACCGGCCACGAAGCCGTTCACATACACATGTaGAGGGTGGATGAGGAAAGGACAGATGAGAAACTGGGACCATAC +
Preference number: 1 (lower is better)
Translates to: MRNHHTGHEAVHIHM*RVDEERTDEKLGPY
Trigger: GTATGGTCCCAGTTTCTCATCTGTCCTTTCCTCATCCACCCTGCACATGTGTATGTGAACGGCTTCGTGGCCGGTGTGGTGGTTTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp ACACATGACCTGTGTCCTTCCCAATGGACCACCCCATTAGAAGTATaGGAGATGGCAGCTCTTAGAAAGTGGCCTTTGGGGCCCAACTTT +
Preference number: 1 (lower is better)
Translates to: THDLCPSQWTTPLEV*EMAALRKWPLGPNF
Trigger: AAAGTTGGGCCCCAAAGGCCACTTTCTAAGAGCTGCCATCTCTCATACTTCTAATGGGGTGGTCCATTGGGAAGGACACAGGTCATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR TCA 90 bp AAAAATCAGCCCAAGGATTCAAAGCCCTCGAGGAGTAGAGGGGTGTaGGAAGAACCACATGTCAACACACCGGCTCTCTCTTCACAGAGA +
Preference number: 1 (lower is better)
Translates to: KNQPKDSKPSRSRGV*EEPHVNTPALSSQR
Trigger: TCTCTGTGAAGAGAGAGCCGGTGTGTTGACATGTGGTTCTTCTCACACCCCTCTACTCCTCGAGGGCTTTGAATCCTTGGGCTGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp TCTTCGGAGGACCAAAGCACCAACTTTCCCCCGTCAGTGGAACTTTaGAACTATAGTGTGGATGGAGTCCAAGACATGATAGCACACCAG +
Preference number: 1 (lower is better)
Translates to: SSEDQSTNFPPSVEL*NYSVDGVQDMIAHQ
Trigger: CTGGTGTGCTATCATGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGTTGGTGCTTTGGTCCTCCGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp CACATGTCAACACACCGGCTCTCTCTTCACAGAGATACACTTCTATaGTCCAGACCTGGGGCCGTTTTTACTCTGACACCACTCTCTTAT +
Preference number: 1 (lower is better)
Translates to: HMSTHRLSLHRDTLL*SRPGAVFTLTPLSY
Trigger: ATAAGAGAGTGGTGTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGAAGTGTATCTCTGTGAAGAGAGAGCCGGTGTGTTGACATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 90 bp ACACCGGCTCTCTCTTCACAGAGATACACTTCTATGCTCCAGACCTaGGGCCGTTTTTACTCTGACACCACTCTCTTATTAGGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: TPALSSQRYTSMLQT*GRFYSDTTLLLGVL
Trigger: CAGAACACCTAATAAGAGAGTGGTGTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGAAGTGTATCTCTGTGAAGAGAGAGCCGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 90 bp TACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTaGTCTAGGAAAGGCAGGGAAGTAATAAAAGGAGTCCACAGGAGG +
Preference number: 1 (lower is better)
Translates to: YRHSKAKSTLATKES*SRKGREVIKGVHRR
Trigger: CCTCCTGTGGACTCCTTTTATTACTTCCCTGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR TCA 90 bp ACAGAGATACACTTCTATGCTCCAGACCTGGGGCCGTTTTTACTCTaGCACCACTCTCTTATTAGGTGTTCTGAAAGTTCACACTCCCAA +
Preference number: 1 (lower is better)
Translates to: TEIHFYAPDLGPFLL*HHSLIRCSESSHSQ
Trigger: TTGGGAGTGTGAACTTTCAGAACACCTAATAAGAGAGTGGTGTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGAAGTGTATCTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp CTATTAAATAACATCCAGACAAGGCATGGCCCTTCAACTATCTTATaGAATGAGAAACCACCACACCGGCCACGAAGCCGTTCACATACA +
Preference number: 1 (lower is better)
Translates to: LLNNIQTRHGPSTIL*NEKPPHRPRSRSHT
Trigger: TGTATGTGAACGGCTTCGTGGCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCTGGATGTTATTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 90 bp AACATGACATACCAAGCAGAGGCTCAGAAAGATGGAGCAACAGACTaGGGACATTTTCAACATGGTACTTGGGGATACCTTTGGGAAAGA +
Preference number: 1 (lower is better)
Translates to: NMTYQAEAQKDGATD*GHFQHGTWGYLWER
Trigger: TCTTTCCCAAAGGTATCCCCAAGTACCATGTTGAAAATGTCCTCAGTCTGTTGCTCCATCTTTCTGAGCCTCTGCTTGGTATGTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR GCA 90 bp CCATTAACTTTTACCTTCCCCACTATGAATTCTTTCAAACACTCCTaGTCCCTGGCATTAGATTCTGTCCCACGAGCCATTCATCTTCCA +
Preference number: 1 (lower is better)
Translates to: PLTFTFPTMNSFKHS*SLALDSVPRAIHLP
Trigger: TGGAAGATGAATGGCTCGTGGGACAGAATCTAATGCCAGGGAGCAGGAGTGTTTGAAAGAATTCATAGTGGGGAAGGTAAAAGTTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 90 bp TCTCTTATTAGGTGTTCTGAAAGTTCACACTCCCAAATGAACTCATaGCTGTGTTATTTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTA +
Preference number: 1 (lower is better)
Translates to: SLIRCSESSHSQMNS*LCYFPLKDQKAPSV
Trigger: TACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGAACACCTAATAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGCCAGGGCCATCCCCTaGGGCTCGCCATCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREARAIP*GSPSGL
Trigger: GAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCCAGGGCCATCCCCTaGGGCTCGCCATCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTARAIP*GSPSGL
Trigger: GAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAGACACGGTGAGGCATaGGGGGAGGCGGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRRHGEA*GEAAEE
Trigger: CTCCTCTGCCGCCTCCCCTCATGCCTCACCGTGTCT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTGCACCCCTCTCTCCTaGGACACGGTGAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHCTPLS*DTVRHE
Trigger: CTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCGGTTTCCAGCTAAGTaGCCAGCCTCTCAGGAACAC +
Preference number: 2 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRERFPAK*PASQEH
Trigger: GTGTTCCTGAGAGGCTGGGCACTTAGCTGGAAACCG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCCAGGGCCATCCCCTaGGGCTCGCCATCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: CDITIMQPVPTGQRCENKARAIP*GSPSGL
Trigger: GAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCGATCATGCAGCCAGTaGCGACGGGACAGAGATGTG +
Preference number: 2 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTRSCSQ*RRDRDV
Trigger: CACATCTCTGTCCCGTCGGCACTGGCTGCATGATCG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGAGGGGCAGTGAGACTTaGGTACAGCCTGGGGCTACC +
Preference number: 2 (lower is better)
Translates to: AVPSLGMLKETGDRARDRRGSET*VQPGAT
Trigger: GGTAGCCCCAGGCTGTACTCAAGTCTCACTGCCCCT...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCGATCATGCAGCCAGTaGCGACGGGACAGAGATGTG +
Preference number: 2 (lower is better)
Translates to: EGGPESPSRSPHGFVFLARSCSQ*RRDRDV
Trigger: CACATCTCTGTCCCGTCGGCACTGGCTGCATGATCG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTGCAGGCTGGGCAGCTaGCTCTGCAGCCGACCTGGA +
Preference number: 2 (lower is better)
Translates to: PALWRDRTRATTGTVVKICRLGS*LCSRPG
Trigger: TCCAGGTCGGCTGCAGAGGCAGCTGCCCAGCCTGCA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGTGGGGCTACCTGGTCTaGACCTGTGCTGTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: AVPSLGMLKETGDRARDRWGYLV*TCAVQW
Trigger: CCACTGCACAGCACAGGTCCAGACCAGGTAGCCCCA...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGACATTGTACCGTGTaGCATCACGATCATGCAGCC +
Preference number: 2 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTGHCTV*HHDHAA
Trigger: GGCTGCATGATCGTGATGTCACACGGTACAATGTCC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATGCACCCCTCTCTCCTaGGACACGGTGAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: KPRRPSATLPFGLRRNKICTPLS*DTVRHE
Trigger: CTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGCCCCATAAGGGGCAGTaGGACTTGAGTACAGCCTGG +
Preference number: 2 (lower is better)
Translates to: AVPSLGMLKETGDRARDRPHKGQ*DLSTAW
Trigger: CCAGGCTGTACTCAAGTCTCACTGCCCCTTATGGGG...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCGGTTTCCAGCTAAGTaGCCAGCCTCTCAGGAACAC +
Preference number: 2 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRRFPAK*PASQEH
Trigger: GTGTTCCTGAGAGGCTGGGCACTTAGCTGGAAACCG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGTGACATCACGATCATaGAGCCAGTGCCGACGGGAC +
Preference number: 2 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLVTSRS*SQCRRD
Trigger: GTCCCGTCGGCACTGGCTGCATGATCGTGATGTCAC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGCGGCAGAGGAGTTGTaGGTAGGACATTGTACCGTG +
Preference number: 2 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAAAEEL*VGHCTV
Trigger: CACGGTACAATGTCCTACCCACAACTCCTCTGCCGC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGCGGCAGAGGAGTTGTaGGTAGGACATTGTACCGTG +
Preference number: 2 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCAAEEL*VGHCTV
Trigger: CACGGTACAATGTCCTACCCACAACTCCTCTGCCGC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAAGCAGAATCCCCACCCTaGACGCTAAGGAGACGAGCA +
Preference number: 2 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEAESPP*TLRRRA
Trigger: TGCTCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGC...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGCAAGGTGGAAGAACTaGCTGCCTGCCCCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVARWKN*LPAPAL
Trigger: CAAGGCAGGGGCAGGCAGCCAGTTCTTCCACCTTGC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGACGGGACAGAGATGTaGGAACAAGCACGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCDGTEM*EQARRA
Trigger: AGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCGGTGGAAGAACTGGCTaGCTGCCCCTGCCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAGGRTG*LPLPWS
Trigger: GGACCAAGGCAGGGGCAGGCAGCCAGTTCTTCCACC...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATGCCTGCCCCTGCCTTaGTCCTGGGTTTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVCLPLP*SWVFRM
Trigger: CATCCTGAAAACCCAGGACCAAGGCAGGGGCAGGCA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAGACACGGTGAGGCATaGGGGGAGGCGGCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSRHGEA*GEAAEE
Trigger: CTCCTCTGCCGCCTCCCCTCATGCCTCACCGTGTCT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAACAGCCTGGGGCTACCTaGTCTGGACCTGTGCTGTGC +
Preference number: 2 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKQPGAT*SGPVLC
Trigger: GCACAGCACAGGTCCAGACCAGGTAGCCCCAGGCTG...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp ACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCCCATGCCCCAGTTCTTaGCCAGTCTGCCCCATAAGG +
Preference number: 2 (lower is better)
Translates to: TGDRARDRGPDRTLYTKSPCPSS*PVCPIR
Trigger: CCTTATGGGGCAGACTGGCCAAGAACTGGGGCATGG...GGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR CAA 90 bp CGTGTGAGTTCCCCAGGAGCAGAGACCATGGCTTGCTCACCACTTTaGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCTTGGCATCA +
Preference number: 2 (lower is better)
Translates to: RVSSPGAETMACSPL*TCVWFLDEVLALAS
Trigger: TGATGCCAAGGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCATGGTCTCTGCTCCTGGGGAACTCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGCTTCCGTCTTCTCCTaGGAGGAAGAAGAATATTCT +
Preference number: 2 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRASVFS*EEEEYS
Trigger: AGAATATTCTTCTTCCTCTCAGGAGAAGACGGAAGC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTGGACCTGTGCTGTaGAGTGGTGGGGAAATAAAC +
Preference number: 2 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHSGPVL*SGGEIN
Trigger: GTTTATTTCCCCACCACTGCACAGCACAGGTCCAGA...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR GCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACCTCTTCAGAACTGGTaGCCACACACTGTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVPLQNW*PHTVSV
Trigger: GACACTGACAGTGTGTGGGCACCAGTTCTGAAGAGG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAGACTCTGAGGCAAGGTaGAAGAACTGGCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: LKSSSGSPFGHREQQFLADSEAR*KNWLPA
Trigger: GGCAGGCAGCCAGTTCTTCCACCTTGCCTCAGAGTC...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CAA 90 bp GATGTGCTAACTGGAGTAGGAAGTGATAAGATGGCAGTCCCAAGCTaGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGGGA +
Preference number: 2 (lower is better)
Translates to: DVLTGVGSDKMAVPS*GMLKETGDRARDRG
Trigger: TCCCCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGCCATCTTATCACTTCCTACTCCAGTTAGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR CAA 90 bp ATACGACACAGGGCAGAGCTGAACGTTCCTGTTTTCTTCTGGATCTaGAAGGTTGGTGAGAGGCCGCTGAATGAGACCCAGCCTCGTGTT +
Preference number: 2 (lower is better)
Translates to: IRHRAELNVPVFFWI*KVGERPLNETQPRV
Trigger: AACACGAGGCTGGGTCTCATTCAGCGGCCTCTCACCAACCTTCAAGATCCAGAAGAAAACAGGAACGTTCAGCTCTGCCCTGTGTCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR TCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTTGCACCCCTCTCTCCTaGGACACGGTGAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: RVFPDKSICREATGSSFLCTPLS*DTVRHE
Trigger: CTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCA...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR GCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAACCTGGTCTGGACCTGTaGTGTGCAGTGGTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKPGLDL*CAVVGK
Trigger: TTTCCCCACCACTGCACAGCACAGGTCCAGACCAGG...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAACTGGGCTCTGGTTACTaGGCTGGGGTCTTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKLGSGY*AGVFQS
Trigger: ACTCTGGAAGACCCCAGCCCAGTAACCAGAGCCCAG...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCGACTTGAGTACAGCCTaGGGCTACCTGGTCTGGACC +
Preference number: 2 (lower is better)
Translates to: HSKAKSTLATKESWSRKGDLSTA*GYLVWT
Trigger: GGTCCAGACCAGGTAGCCCCAGGCTGTACTCAAGTC...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCAAGCCAAGTCTACACTaGCCACTAAGGAAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFKPSLH*PLRKAG
Trigger: ACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTT...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGCTTCCGTCTTCTCCTaGGAGGAAGAAGAATATTCT +
Preference number: 2 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIASVFS*EEEEYS
Trigger: AGAATATTCTTCTTCCTCTCAGGAGAAGACGGAAGC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATGTTTCTGGCTTTTATaGACCATGTCCAACTCCAGC +
Preference number: 2 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQECFWLL*TMSNSS
Trigger: GCTGGAGTTGGACATGGTTCATAAAAGCCAGAAACA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR GCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAAAGTTCTTGGCCAGTCTaGCCCATAAGGGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKSSWPV*PIRGSE
Trigger: CTCACTGCCCCTTATGGGGCAGACTGGCCAAGAACT...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp AAGAGACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAGGTGGGGAAATAAACTaGGCTCTGGTTACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: KRQVTGLGTGDLIEHCIQGGEIN*ALVTGL
Trigger: CAGCCCAGTAACCAGAGCCCAGTTTATTTCCCCACC...TTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp ACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTGTGCTGTGCAGTGGTaGGGAAATAAACTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: TGDRARDRGPDRTLYTKSCAVQW*GNKLGS
Trigger: AGAGCCCAGTTTATTTCCCCACCACTGCACAGCACA...GGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTTGCCTGCCCCTGCCTTaGTCCTGGGTTTTCAGGATG +
Preference number: 2 (lower is better)
Translates to: RVFPDKSICREATGSSFLCLPLP*SWVFRM
Trigger: CATCCTGAAAACCCAGGACCAAGGCAGGGGCAGGCA...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR TCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTAGACGAGCATTCCACTaGCTGTCAACTGGGAGCCGT +
Preference number: 2 (lower is better)
Translates to: RVFPDKSICREATGSSFLRRAFH*LSTGSR
Trigger: ACGGCTCCCAGTTGACAGTCAGTGGAATGCTCGTCT...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR TCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACCGTCAGTGGAACTTTaGAACTATAGTGTGGATGGA +
Preference number: 2 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVPSVEL*NYSVDG
Trigger: TCCATCCACACTATAGTTTCAAAGTTCCACTGACGG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGGCAAGGTCGAAAGGTaGCATCTTCGGAGGACCAAA +
Preference number: 2 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGGKVER*HLRRTK
Trigger: TTTGGTCCTCCGAAGATGTCACCTTTCGACCTTGCC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCACTGTCTGAAAGCCCATaGCCCAGTTCTTGGCCAGTC +
Preference number: 2 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKALSESP*PSSWPV
Trigger: GACTGGCCAAGAACTGGGGCATGGGCTTTCAGACAG...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCGAATTTTTCACCCCCTaGGTGAGCCAGTGCTCAAGA +
Preference number: 2 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAEFFTP*VSQCSR
Trigger: TCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTC...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAAACCTGTGCTGTGCAGTaGTGGGGAAATAAACTGGGC +
Preference number: 2 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKTCAVQ*WGNKLG
Trigger: GCCCAGTTTATTTCCCCACCACTGCACAGCACAGGT...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCCTCCTCTTCAGAACTaGTGCCCACACACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGPPLQN*CPHTVS
Trigger: ACTGACAGTGTGTGGGCACCAGTTCTGAAGAGGAGG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CAA 90 bp GAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTaGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCA +
Preference number: 2 (lower is better)
Translates to: ESSHSQMNSCLCYFP*KDQKAPSVPSEDTA
Trigger: TGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGTTGGTAACAGTCCATaGAACGTGCACCCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSVGNSP*NVHPSL
Trigger: GAGAGAGGGGTGCACGTTTCATGGACTGTTACCAAC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGGAGGCAAGAAAGCGTaGAAACAGGGGCGGGAATTT +
Preference number: 2 (lower is better)
Translates to: TFPRQWNFETIVWMESKTGGKKA*KQGREF
Trigger: AAATTCCCGCCCCTGTTTGCACGCTTTCTTGCCTCC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTGCCACTAAGGAAAGCTaGTCTAGGAAAGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: HTDIDATKLLGATHDLCPATKES*SRKGRE
Trigger: TTCCCTGCCTTTCCTAGACCAGCTTTCCTTAGTGGC...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCAGGCATGAGGTGTTaGATCAGCTCCACTCAAAGA +
Preference number: 2 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAGMRC*ISSTQR
Trigger: TCTTTGAGTGGAGCTGATCCAACACCTCATGCCTGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTGTGACTCTGAGCATTaGGGTCTGACTCCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGCDSEH*GLTPEC
Trigger: ACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGCTTCCGTCTTCTCCTaGGAGGAAGAAGAATATTCT +
Preference number: 2 (lower is better)
Translates to: TFPRQWNFETIVWMESKTASVFS*EEEEYS
Trigger: AGAATATTCTTCTTCCTCTCAGGAGAAGACGGAAGC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGGACATTGTACCGTGTaGCATCACGATCATGCAGCC +
Preference number: 2 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKGHCTV*HHDHAA
Trigger: GGCTGCATGATCGTGATGTCACACGGTACAATGTCC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGTGGATGACTCTGTGTaGGCTGAAACAGCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKVDDSV*AETASA
Trigger: TGCAGAGGCTGTTTCAGCTCACACAGAGTCATCCAC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAAATACAAGATGGGTCTaGGTTGTACAAGGAGCTTAC +
Preference number: 2 (lower is better)
Translates to: TFPRQWNFETIVWMESKTNTRWV*VVQGAY
Trigger: GTAAGCTCCTTGTACAACCCAGACCCATCTTGTATT...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR TCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTTGTATTTTAAAACCATaGCATGGGCTAGAGTCTGGT +
Preference number: 2 (lower is better)
Translates to: RVFPDKSICREATGSSFLCILKP*HGLESG
Trigger: ACCAGACTCTAGCCCATGTCATGGTTTTAAAATACA...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGAATCGTTCAGTTTTCTaGGCCACAAAATACAAGATG +
Preference number: 2 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRNRSVF*ATKYKM
Trigger: CATCTTGTATTTTGTGGCCCAGAAAACTGAACGATT...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATGTGACTCTGAGCATTaGGGTCTGACTCCTGAGTGT +
Preference number: 2 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLCDSEH*GLTPEC
Trigger: ACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATCTTTCAAACACTCCTaGTCCCTGGCATTAGATTCT +
Preference number: 2 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLSFKHS*SLALDS
Trigger: AGAATCTAATGCCAGGGAGCAGGAGTGTTTGAAAGA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAACTTTCCCCCGTCAGTaGAACTTTGAAACTATAGTG +
Preference number: 2 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLTFPRQ*NFETIV
Trigger: CACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp GGCCCGTGCATAGACTGCAGGCTGGGCAGCTGCCTCTaGAGCCGACCTGGAGGGACTGTGTTGACCGACTGC +
Preference number: 3 (lower is better)
Translates to: GPCIDCRLGSCL*SRPGGTVLTDC
Trigger: GCAGTCGGTCAACACAGTCCCTCCAGGTCGGCTGCAGAGGCAGCTGCCCAGCCTGCAGTCTATGCACGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 72 bp CACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTaGGAACAAGCACGCAGGGCTCCAGGCTCACCCGGG +
Preference number: 3 (lower is better)
Translates to: HDHAASADGTEM*EQARRAPGSPG
Trigger: CCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp TGGGGTCTGACTCCTGAGTGTCTCTGGAAGCACGTGTaGCCCTCCTCTCAGTGTCCGGCCAAGGCAGGCATG +
Preference number: 3 (lower is better)
Translates to: WGLTPECLWKHV*PSSQCPAKAGM
Trigger: CATGCCTGCCTTGGCCGGACACTGAGAGGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp TCCATGAAACGTGCACCCCTCTCTCCTGAGACACGGTaGGGCATGAGGGGAGGCGGCAGAGGAGTTGTGGGT +
Preference number: 3 (lower is better)
Translates to: SMKRAPLSPETR*GMRGGGRGVVG
Trigger: ACCCACAACTCCTCTGCCGCCTCCCCTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCACGTTTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp TGTGCCCCTCCTCTCAGTGTCCGGCCAAGGCAGGCATaGGGTGTTGGATCAGCTCCACTCAAAGAGGGCGAG +
Preference number: 3 (lower is better)
Translates to: CAPPLSVRPRQA*GVGSAPLKEGE
Trigger: CTCGCCCTCTTTGAGTGGAGCTGATCCAACACCTCATGCCTGCCTTGGCCGGACACTGAGAGGAGGGGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp CTCACCCGGGAGGGAGGTGGGCGGTTTCCAGCTAAGTaGCCAGCCTCTCAGGAACACTGTCTGTCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: LTREGGGRFPAK*PASQEHCLSSS
Trigger: TGAACTGGACAGACAGTGTTCCTGAGAGGCTGGGCACTTAGCTGGAAACCGCCCACCTCCCTCCCGGGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp CTCTGCAGCCGACCTGGAGGGACTGTGTTGACCGACTaGAGGGCCAACCAGGAATTGAGGAACCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: LCSRPGGTVLTD*RANQELRNLPA
Trigger: TGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCGGTCAACACAGTCCCTCCAGGTCGGCTGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR CCA 72 bp GACTCTGAGCATTGGGGTCTGACTCCTGAGTGTCTCTaGAAGCACGTGTGCCCCTCCTCTCAGTGTCCGGCC +
Preference number: 3 (lower is better)
Translates to: DSEHWGLTPECL*KHVCPSSQCPA
Trigger: GGCCGGACACTGAGAGGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp GGATCAGCTCCACTCAAAGAGGGCGAGCCAAGAGTGTaGCAGCTTTTCCCCAACAGGCTAGGGCTCCAGCAG +
Preference number: 3 (lower is better)
Translates to: GSAPLKEGEPRV*QLFPNRLGLQQ
Trigger: CTGCTGGAGCCCTAGCCTGTTGGGGAAAAGCTGGCACACTCTTGGCTCGCCCTCTTTGAGTGGAGCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGCCCATGCCCCAGTTCTaGGCCAGTCTGCCCCATAAG +
Preference number: 3 (lower is better)
Translates to: AVPSLGMLKETGDRARDRPMPQF*ASLPHK
Trigger: CTTATGGGGCAGACTGGCCAAGAACTGGGGCATGGG...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGAGGCGGCAGAGGAGTaGTGGGTAGGACATTGTACC +
Preference number: 3 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFEAAEE*WVGHCT
Trigger: GGTACAATGTCCTACCCACAACTCCTCTGCCGCCTC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp GCGGCAGAGGAGTTGTGGGTAGGACATTGTACCGTGTaGCATCACGATCATGCAGCCAGTGCCGACGGGACA +
Preference number: 3 (lower is better)
Translates to: AAEELWVGHCTV*HHDHAASADGT
Trigger: TGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCCTCTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp TGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTaGGTCACCCTCCCGGAGTCCACACGGGTTTGTGTT +
Preference number: 3 (lower is better)
Translates to: WVSQCSRHGRRT*VTLPESTRVCV
Trigger: AACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp TCCCCACCCTGGACGCTAAGGAGACGAGCATTCCACTaGCTGTCAACTGGGAGCCGTGGGTTTGTGTGGATG +
Preference number: 3 (lower is better)
Translates to: SPPWTLRRRAFH*LSTGSRGFVWM
Trigger: CATCCACACAAACCCACGGCTCCCAGTTGACAGTCAGTGGAATGCTCGTCTCCTTAGCGTCCAGGGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp ATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATaGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: IFHPLGEPVLKT*KEDLSHPPGVH
Trigger: GTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGAGGCGGCAGAGGAGTaGTGGGTAGGACATTGTACC +
Preference number: 3 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIEAAEE*WVGHCT
Trigger: GGTACAATGTCCTACCCACAACTCCTCTGCCGCCTC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp GTACAGCCTGGGGCTACCTGGTCTGGACCTGTGCTGTaGAGTGGTGGGGAAATAAACTGGGCTCTGGTTACT +
Preference number: 3 (lower is better)
Translates to: VQPGATWSGPVL*SGGEINWALVT
Trigger: AGTAACCAGAGCCCAGTTTATTTCCCCACCACTGCACAGCACAGGTCCAGACCAGGTAGCCCCAGGCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR CCA 72 bp TCTGGACCTGTGCTGTGCAGTGGTGGGGAAATAAACTaGGCTCTGGTTACTGGGCTGGGGTCTTCCAGAGTG +
Preference number: 3 (lower is better)
Translates to: SGPVLCSGGEIN*ALVTGLGSSRV
Trigger: CACTCTGGAAGACCCCAGCCCAGTAACCAGAGCCCAGTTTATTTCCCCACCACTGCACAGCACAGGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CAA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCCCTGGAGGGACTGTGTaGACCGACTGCAGGGCCAAC +
Preference number: 3 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAPGGTV*TDCRAN
Trigger: GTTGGCCCTGCAGTCGGTCAACACAGTCCCTCCAGG...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 72 bp GGCCATGAACACATTGTGACTCTGAGCATTGGGGTCTaGCTCCTGAGTGTCTCTGGAAGCACGTGTGCCCCT +
Preference number: 3 (lower is better)
Translates to: GHEHIVTLSIGV*LLSVSGSTCAP
Trigger: AGGGGCACACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACAATGTGTTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAAGATGAGGTTTTGGCCTaGGCATCACTTTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEDEVLA*ASLWRW
Trigger: CCACCTCCAAAGTGATGCCAAGGCCAAAACCTCATC...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 72 bp CCCAAGGATTCAAAGCCCTCGAGGAGTAGAGGGGTGTaGGAAGAACCACATGTCAACACACCGGCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: PKDSKPSRSRGV*EEPHVNTPALS
Trigger: AGAGAGAGCCGGTGTGTTGACATGTGGTTCTTCTCACACCCCTCTACTCCTCGAGGGCTTTGAATCCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp CCTCGTGTTTTGTGGGATGAAGAGATGCAGACAAAGTaGCTCAGGTACACTGATGCTCCCTGGAGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PRVLWDEEMQTK*LRYTDAPWRAG
Trigger: CCCAGCCCTCCAGGGAGCATCAGTGTACCTGAGTCACTTTGTCTGCATCTCTTCATCCCACAAAACACGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR GCA 72 bp ACATTGTACCGTGTGACATCACGATCATGCAGCCAGTaGCGACGGGACAGAGATGTGAGAACAAGCACGCAG +
Preference number: 3 (lower is better)
Translates to: TLYRVTSRSCSQ*RRDRDVRTSTQ
Trigger: CTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACACGGTACAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp GTGGGTAGGACATTGTACCGTGTGACATCACGATCATaGAGCCAGTGCCGACGGGACAGAGATGTGAGAACA +
Preference number: 3 (lower is better)
Translates to: VGRTLYRVTSRS*SQCRRDRDVRT
Trigger: TGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp CAGCGTGTGAGTTCCCCAGGAGCAGAGACCATGGCTTaGTCACCACTTTTGACCTGTGTCTGGTTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: QRVSSPGAETMA*SPLLTCVWFLD
Trigger: ATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCATGGTCTCTGCTCCTGGGGAACTCACACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACCGCAACTCTGCCCTTaGGACTACGGAGGAACAAAA +
Preference number: 3 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVPQLCP*DYGGTK
Trigger: TTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp GAGTCTGGTGAAACAAGATCGGGCAAGGTCGAAAGGTaGCATCTTCGGAGGACCAAAGCACCAACTTTCCCC +
Preference number: 3 (lower is better)
Translates to: ESGETRSGKVER*HLRRTKAPTFP
Trigger: GGGGAAAGTTGGTGCTTTGGTCCTCCGAAGATGTCACCTTTCGACCTTGCCCGATCTTGTTTCACCAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGAGGCGGCAGAGGAGTaGTGGGTAGGACATTGTACC +
Preference number: 3 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSEAAEE*WVGHCT
Trigger: GGTACAATGTCCTACCCACAACTCCTCTGCCGCCTC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTAGGGCCAACCAGGAATaGAGGAACCTGCCTGCACAG +
Preference number: 3 (lower is better)
Translates to: RVFPDKSICREATGSSFLRANQE*RNLPAQ
Trigger: CTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCT...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 72 bp CTGTGTCCTTCCCAATGGACCACCCCATTAGAAGTATaGGAGATGGCAGCTCTTAGAAAGTGGCCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LCPSQWTTPLEV*EMAALRKWPLG
Trigger: CCCCAAAGGCCACTTTCTAAGAGCTGCCATCTCTCATACTTCTAATGGGGTGGTCCATTGGGAAGGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR TCA 72 bp CCAGACAAGGCATGGCCCTTCAACTATCTTATGAAATaGGAAACCACCACACCGGCCACGAAGCCGTTCACA +
Preference number: 3 (lower is better)
Translates to: PDKAWPFNYLMK*ETTTPATKPFT
Trigger: TGTGAACGGCTTCGTGGCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp AATGCAGTAAAGGTTTTAAATGACTCTGAGGCAAGGTaGAAGAACTGGCTGCCTGCCCCTGCCTTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: NAVKVLNDSEAR*KNWLPAPALVL
Trigger: CAGGACCAAGGCAGGGGCAGGCAGCCAGTTCTTCCACCTTGCCTCAGAGTCATTTAAAACCTTTACTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp TCCCCCAAGCCCTGGACTCCTTCTATGTGTTCACACTaGTATAGATGCTACAAAGCTCCTTGGAGCCACACA +
Preference number: 3 (lower is better)
Translates to: SPKPWTPSMCSH*YRCYKAPWSHT
Trigger: TGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTGAACACATAGAAGGAGTCCAGGGCTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR TCA 72 bp AACATCCAGACAAGGCATGGCCCTTCAACTATCTTATaGAATGAGAAACCACCACACCGGCCACGAAGCCGT +
Preference number: 3 (lower is better)
Translates to: NIQTRHGPSTIL*NEKPPHRPRSR
Trigger: ACGGCTTCGTGGCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCTGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp AAGTATGAGAGATGGCAGCTCTTAGAAAGTGGCCTTTaGGGCCCAACTTTGGCTACCGTTAGACTCTTACGG +
Preference number: 3 (lower is better)
Translates to: KYERWQLLESGL*GPTLATVRLLR
Trigger: CCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCACTTTCTAAGAGCTGCCATCTCTCATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR CCA 72 bp CTTCGGAGGACCAAAGCACCAACTTTCCCCCGTCAGTaGAACTTTGAAACTATAGTGTGGATGGAGTCCAAG +
Preference number: 3 (lower is better)
Translates to: LRRTKAPTFPRQ*NFETIVWMESK
Trigger: CTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGTTGGTGCTTTGGTCCTCCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp GAGACCATGGCTTGCTCACCACTTTTGACCTGTGTCTaGTTCCTTGATGAGGTTTTGGCCTTGGCATCACTT +
Preference number: 3 (lower is better)
Translates to: ETMACSPLLTCV*FLDEVLALASL
Trigger: AAGTGATGCCAAGGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCATGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGTTGTGGGTAGGACATaGTACCGTGTGACATCACGA +
Preference number: 3 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGVVGRT*YRVTSR
Trigger: TCGTGATGTCACACGGTACAATGTCCTACCCACAAC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACCGCAACTCTGCCCTTaGGACTACGGAGGAACAAAA +
Preference number: 3 (lower is better)
Translates to: TFPRQWNFETIVWMESKTPQLCP*DYGGTK
Trigger: TTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp TCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCATGGCAGTCCCAAGCTaGGGCATGCTAAAAGAGACA +
Preference number: 3 (lower is better)
Translates to: SYGYRHSKAKSTLATKESMAVPS*GMLKET
Trigger: TGTCTCTTTTAGCATGCCCAAGCTTGGGACTGCCAT...GCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATACACATACTCTCACTaGCTTTTCCTTTACAGCGTC +
Preference number: 3 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVYTYSH*LFLYSV
Trigger: GACGCTGTAAAGGAAAAGCAAGTGAGAGTATGTGTA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp AGGAATCTGAGAATGGAACATGCTGATAGTCTGTGCTaGGATCTTAAGGCCAGCATCCCAGAGGCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: RNLRMEHADSLC*DLKASIPEAFP
Trigger: TGGAAAGGCCTCTGGGATGCTGGCCTTAAGATCTCAGCACAGACTATCAGCATGTTCCATTCTCAGATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR TCA 72 bp CCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATCTaGGAATGGAACATGCTGATAGTCTGTGCTGAGATC +
Preference number: 3 (lower is better)
Translates to: PWSTEGTFPPGI*EWNMLIVCAEI
Trigger: GATCTCAGCACAGACTATCAGCATGTTCCATTCTCAGATTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR GCA 72 bp GAAGAAGCTCGAAGGGTTTTCCCTGATAAAAGCATATaGCGTGAGGCTACAGGCAGCTCATTTCTTAAGGCC +
Preference number: 3 (lower is better)
Translates to: EEARRVFPDKSI*REATGSSFLKA
Trigger: GGCCTTAAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCTTCGAGCTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR-3UTR CAA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTATTCAGGCAAGACTTaGTTTCATGAAAGTAGCTCT +
Preference number: 3 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHYSGKT*FHESSS
Trigger: AGAGCTACTTTCATGAAACAAAGTCTTGCCTGAATA...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
3UTR-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCCTTTGCATTTGGTTaGTCTCTGGAGGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAFAFG*SLEAFL
Trigger: CAGAAAAGCCTCCAGAGACAAACCAAATGCAAAGGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp CACACCAGAGAGAGAGAGAGAGAGAGAGGCGGAGGGTaGGTGCCTTTAACTGTTACCAGTTTTGAAAATCAT +
Preference number: 3 (lower is better)
Translates to: HTRERERERGGG*VPLTVTSFENH
Trigger: ATGATTTTCAAAACTGGTAACAGTTAAAGGCACTCACCCTCCGCCTCTCTCTCTCTCTCTCTCTCTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp GTTCAGTTTTCTGGGCCACAAAATACAAGATGGGTCTaGGTTGTACAAGGAGCTTACACACGGAGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: VQFSGPQNTRWV*VVQGAYTRRQE
Trigger: TTCTTGCCTCCGTGTGTAAGCTCCTTGTACAACCCAGACCCATCTTGTATTTTGTGGCCCAGAAAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp GACCAAAGCACCAACTTTCCCCCGTCAGTGGAACTTTaGAACTATAGTGTGGATGGAGTCCAAGACATGATA +
Preference number: 3 (lower is better)
Translates to: DQSTNFPPSVEL*NYSVDGVQDMI
Trigger: TATCATGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGTTGGTGCTTTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp CACTTCTATGCTCCAGACCTGGGGCCGTTTTTACTCTaGCACCACTCTCTTATTAGGTGTTCTGAAAGTTCA +
Preference number: 3 (lower is better)
Translates to: HFYAPDLGPFLL*HHSLIRCSESS
Trigger: TGAACTTTCAGAACACCTAATAAGAGAGTGGTGTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp TACCAAGCAGAGGCTCAGAAAGATGGAGCAACAGACTaGGGACATTTTCAACATGGTACTTGGGGATACCTT +
Preference number: 3 (lower is better)
Translates to: YQAEAQKDGATD*GHFQHGTWGYL
Trigger: AAGGTATCCCCAAGTACCATGTTGAAAATGTCCTCAGTCTGTTGCTCCATCTTTCTGAGCCTCTGCTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR GCA 72 bp TTTACCTTCCCCACTATGAATTCTTTCAAACACTCCTaGTCCCTGGCATTAGATTCTGTCCCACGAGCCATT +
Preference number: 3 (lower is better)
Translates to: FTFPTMNSFKHS*SLALDSVPRAI
Trigger: AATGGCTCGTGGGACAGAATCTAATGCCAGGGAGCAGGAGTGTTTGAAAGAATTCATAGTGGGGAAGGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp ATAATCGTTCAGTTTTCTGGGCCACAAAATACAAGATaGGTCTGGGTTGTACAAGGAGCTTACACACGGAGG +
Preference number: 3 (lower is better)
Translates to: IIVQFSGPQNTR*VWVVQGAYTRR
Trigger: CCTCCGTGTGTAAGCTCCTTGTACAACCCAGACCCATCTTGTATTTTGTGGCCCAGAAAACTGAACGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp CTCTCTTCACAGAGATACACTTCTATGCTCCAGACCTaGGGCCGTTTTTACTCTGACACCACTCTCTTATTA +
Preference number: 3 (lower is better)
Translates to: LSSQRYTSMLQT*GRFYSDTTLLL
Trigger: TAATAAGAGAGTGGTGTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGAAGTGTATCTCTGTGAAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR GCA 72 bp AGGTGTTCTGAAAGTTCACACTCCCAAATGAACTCATaGCTGTGTTATTTTCCTTTGAAGGACCAGAAGGCC +
Preference number: 3 (lower is better)
Translates to: RCSESSHSQMNS*LCYFPLKDQKA
Trigger: GGCCTTCTGGTCCTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGAACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGTTGTGGGTAGGACATaGTACCGTGTGACATCACGA +
Preference number: 3 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKVVGRT*YRVTSR
Trigger: TCGTGATGTCACACGGTACAATGTCCTACCCACAAC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR TCA 72 bp ATGTATTTTAAAACCATGACATGGGCTAGAGTCTGGTaGAACAAGATCGGGCAAGGTCGAAAGGTGACATCT +
Preference number: 3 (lower is better)
Translates to: MYFKTMTWARVW*NKIGQGRKVTS
Trigger: AGATGTCACCTTTCGACCTTGCCCGATCTTGTTTCACCAGACTCTAGCCCATGTCATGGTTTTAAAATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR-3UTR CAA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGCCTTTGCATTTGGTTaGTCTCTGGAGGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKAFAFG*SLEAFL
Trigger: CAGAAAAGCCTCCAGAGACAAACCAAATGCAAAGGC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CCA 72 bp CTTGACAACTCAGTTCATTTAGGAACGTCTCGAACATaGTTTGCGCTCAATAAACAGCTTGCTGAATTTCAC +
Preference number: 3 (lower is better)
Translates to: LDNSVHLGTSRT*FALNKQLAEFH
Trigger: GTGAAATTCAGCAAGCTGTTTATTGAGCGCAAACCATGTTCGAGACGTTCCTAAATGAACTGAGTTGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGGTCGGTTGTCGATaGAGCCACTCCACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGVGCR*SHSTGG
Trigger: GCCGCCCGTGGAGTGGCTGCATCGACAACCGACCCC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCCTGGTGCCCCGGGTaGCCTCATCCTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPWCPG*PHPPLP
Trigger: AGGCAGTGGAGGATGAGGCCACCCGGGGCACCAGGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTCCCTCTGGGCTGCTaGGGCCGATTTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLPLGC*GRFDQG
Trigger: GCCCTGGTCAAATCGGCCTCAGCAGCCCAGAGGGAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGAGACACGGTGAGGCATaGGGGGAGGCGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRERHGEA*GEAAEE
Trigger: CTCCTCTGCCGCCTCCCCTCATGCCTCACCGTGTCT...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGAGACACGGTGAGGCATaGGGGGAGGCGGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPRHGEA*GEAAEE
Trigger: CTCCTCTGCCGCCTCCCCTCATGCCTCACCGTGTCT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCATGGAGGGCCTGGCTaGCCACGCTGGCCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGHGGPG*PRWPLR
Trigger: GCGCAGCGGCCAGCGTGGTCAGCCAGGCCCTCCATG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTGCAGGCTGGGCAGCTaGCTCTGCAGCCGACCTGGA +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRCRLGS*LCSRPG
Trigger: TCCAGGTCGGCTGCAGAGGCAGCTGCCCAGCCTGCA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGCCCGTGCATAGACTaGAGGCTGGGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRGPCID*RLGSCL
Trigger: GAGGCAGCTGCCCAGCCTGCAGTCTATGCACGGGCC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCTCGTGGCCAGGCTCTaGCTGACGGCGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHLVARL*LTAASE
Trigger: CTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCACGAG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGAGGACTGGGCCGCCTaGGCCAGCTTGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGEDWAA*ASLSGV
Trigger: CACTCCTGACAAGCTGGCCCAGGCGGCCCAGTCCTC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCAGCAGCTGAGCCGTaGAAGCGGCGACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPAAEP*KRRPAW
Trigger: CCAAGCAGGTCGCCGCTTCCACGGCTCAGCTGCTGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACACTCTGGCCCCGGGTaGCATGGACCACTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGHSGPG*HGPLPQ
Trigger: CTGGGGAAGTGGTCCATGCCACCCGGGGCCAGAGTG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGCCAACTCTCCACTCTaGCCCCGGGTGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREANSPL*PRVAWT
Trigger: GGTCCATGCCACCCGGGGCCAGAGTGGAGAGTTGGC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTGCTGAGGCCGATTTaGCCAGGGCGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLLRPI*PGRLWQ
Trigger: CTGCCACAAGCGCCCTGGTCAAATCGGCCTCAGCAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCGCCTCATGGCCTCTaGATCCTGGTCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPPHGL*ILVGLH
Trigger: GTGAAGGCCGACCAGGATTCAGAGGCCATGAGGCGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCGCCTCATGGCCTCTaGATCCTGGTCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPPHGL*ILVGLH
Trigger: GTGAAGGCCGACCAGGATTCAGAGGCCATGAGGCGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACCGCCTCATGGCCTCTaGATCCTGGTCGGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGPPHGL*ILVGLH
Trigger: GTGAAGGCCGACCAGGATTCAGAGGCCATGAGGCGG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRFRRGC*HLALES
Trigger: GCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPFRRGC*HLALES
Trigger: GCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCGTGGCCCAGGTCCTaGACACGAGTGCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPWPRS*TRVRIW
Trigger: CCAGATTCGCACTCGTGTGCAGGACCTGGGCCACGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGTCGGCCTTCACCTTaGAGGCCACCAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGRPSP*RPPAAE
Trigger: CTCAGCTGCTGGTGGCCTGCAAGGTGAAGGCCGACC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGCTGCCGCTGCGGCCTaGTTGGCTGCAACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGAAAAA*LAATSS
Trigger: ACTGGAGGTTGCAGCCAAGCAGGCCGCAGCGGCAGC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGTGGAAGAACTGGCTaGCTGCCCCTGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRGGRTG*LPLPWS
Trigger: GGACCAAGGCAGGGGCAGGCAGCCAGTTCTTCCACC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCCTGGCAAACTGGATaGGGTCCACCAGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPWQTG*GPPGPG
Trigger: ACCAGGGCCTGGTGGACCCCATCCAGTTTGCCAGGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGCCACCAGCTCCCTCTaGGCTGCTGAGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREATSSL*AAEADL
Trigger: CAAATCGGCCTCAGCAGCCCAGAGGGAGCTGGTGGC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGAGCCCACCTTTCCTTaGGCCACCAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGEPTFP*ATSSLW
Trigger: CCAGAGGGAGCTGGTGGCCCAAGGAAAGGTGGGCTC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCTCACAGAGACTGCTaGTCGCAGCCGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPHRDC*SQPPPS
Trigger: GGATGGTGGCGGCTGCGACCAGCAGTCTCTGTGAGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTCAGCAGCTGTGCCATaGAGGAGCCCACCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRSAAVP*RSPPPW
Trigger: CCAAGGCGGTGGGCTCCTCCATGGCACAGCTGCTGA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAAGGTCTCAGGCCCGCTaGAGCCCGAGCGCATCACGG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGRSQAR*SPSASR
Trigger: CCGTGATGCGCTCGGGCTCCAGCGGGCCTGAGACCT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGCAGCTCCGCCAAGCTaGTGGCCAGGTTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREAAPPS*WPGSWH
Trigger: GTGCCAAGAACCTGGCCACCAGCTTGGCGGAGCTGC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGTTGGCCGTCTTGGATaGGGCGATGCGGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGVGRLG*GDAAGI
Trigger: AATGCCTGCCGCATCGCCTCATCCAAGACGGCCAAC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCTTCTGCGAGCTGGGTaGTGGTGGCTGCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPLLRAG*WWLLRT
Trigger: AGTCCTCAGCAGCCACCATCACCCAGCTCGCAGAAG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTGGCTGCCCCCAGCTTaGCCACTTCTGCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHWLPPA*PLLRAG
Trigger: CCCAGCTCGCAGAAGTGGTCAAGCTGGGGGCAGCCA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGTCCTCCTGTCTACATaGGTTCCCAGCTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRVLLST*VPSCHG
Trigger: GCCGTGGCAGCTGGGAACTCATGTAGACAGGAGGAC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGTCCTCCTGTCTACATaGGTTCCCAGCTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREVLLST*VPSCHG
Trigger: GCCGTGGCAGCTGGGAACTCATGTAGACAGGAGGAC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGTCCTCCTGTCTACATaGGTTCCCAGCTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGVLLST*VPSCHG
Trigger: GCCGTGGCAGCTGGGAACTCATGTAGACAGGAGGAC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCTTCCGCCGCCTGGATaGGCTCTGTCACAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRLPPPG*ALSQRR
Trigger: CCGGCGCTGTGACAGAGCTCATCCAGGCGGCGGAAG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTGCACCCCTCTCTCCTaGGACACGGTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRCTPLS*DTVRHE
Trigger: CTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCTTGGCCTCTTGAATaGGCATGGCGGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGAWPLE*AWRSPP
Trigger: TGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCCCTCAGTACCATCTaGGGACACCGCAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPLSTI*GHRSSA
Trigger: GGCACTACTGCGGTGTCCTCAGATGGTACTGAGGGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCAATGGCGTCCACCATaGCCCCAACCAGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREQWRPP*PQPAPL
Trigger: AAGTGGGGCTGGTTGGGGGCATGGTGGACGCCATTG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGAGGGCCCCTGCCTTCTaGACCAGGAAGATACAGCCG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRRAPAF*TRKIQP
Trigger: CGGCTGTATCTTCCTGGTGCAGAAGGCAGGGGCCCT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCCTCAAGCGCCCTGGTaGCCCGGGTGGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRPQAPW*PGWPHP
Trigger: AGGATGAGGCCACCCGGGGCACCAGGGCGCTTGAGG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACCGCCTCACAGAGACTaGTGGTCGCAGCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGPPHRD*WSQPPP
Trigger: TGGTGGCGGCTGCGACCAGCAGTCTCTGTGAGGCGG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTGTATTACAGCCCCTaGTCACCAAGCCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLYYSP*SPSPDG
Trigger: GCCGTCGGGGCTTGGTGAGCAGGGGCTGTAATACAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCACCGCCTTGGATGTaGTTCCCAGGTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPPPWM*FPGPEH
Trigger: GTGCTCAGGACCTGGGAAGCACATCCAAGGCGGTGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGAAGAACTGGCTGCCTaGCCCTGCCTTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGEELAA*PCLGPG
Trigger: CCCAGGACCAAGGCAGGGGCAGGCAGCCAGTTCTTC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCCTCTGGTTCCGCCGTaGCTGCTGCCATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTPLVPP*LLPSGP
Trigger: AGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTTAGCCCTGGCAAACTaGATGGGGTCCACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRLALAN*MGSTRP
Trigger: GGGCCTGGTGGACCCCATCCAGTTTGCCAGGGCTAA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTCTGTGGGGCAGACCTaGAGGGCCCCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHSVGQT*RAPAFC
Trigger: GCAGAAGGCAGGGGCCCTCCAGGTCTGCCCCACAGA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCAGCCCCCTTGAGCTaGTACATGGAAGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPAAPLS*YMEGSS
Trigger: GGACGACCCTTCCATGTACCAGCTCAAGGGGGCTGC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGATGGCTTCCGCCGCCTaGATGAGCTCTGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRMASAA*MSSVTA
Trigger: CGCTGTGACAGAGCTCATCCAGGCGGCGGAAGCCAT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCTGTAGCCGCCTCATaGCCTCTGAATCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPVAAS*PLNPGR
Trigger: CCGACCAGGATTCAGAGGCCATGAGGCGGCTACAGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACCTGTAGCCGCCTCATaGCCTCTGAATCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGPVAAS*PLNPGR
Trigger: CCGACCAGGATTCAGAGGCCATGAGGCGGCTACAGG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCTGGGCAGCTGCGTTaGTTGCTACCCGGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESGQLR*LLPGGL
Trigger: AAGGCCTCCGGGTAGCAACCAACGCAGCTGCCCAGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATACACTGATGCTCCCTaGAGGGCTGGGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGYTDAP*RAGRWA
Trigger: AGCCCACCTCCCAGCCCTCCAGGGAGCATCAGTGTA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGCGACTTCCTTGGCTaGCTGGACGAAGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREGDFLG*LDEVPL
Trigger: AAGAGGCACTTCGTCCAGTCAGCCAAGGAAGTCGCC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCTCCCTCTGGGCTGCTaGGGCCGATTTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRLPLGC*GRFDQG
Trigger: GCCCTGGTCAAATCGGCCTCAGCAGCCCAGAGGGAG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGAGAAATCAGCCCCTGTaGCCACTGTCCGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRERNQPL*PLSVVC
Trigger: GCAGACGACGGACAGTGGTCACAGGGGCTGATTTCT...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACAGGCCACCAGCAGCTaGGCCGTGGAAGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIQATSS*AVEAAT
Trigger: GGTCGCCGCTTCCACGGCTCAGCTGCTGGTGGCCTG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGACGGGACAGAGATGTaGGAACAAGCACGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPDGTEM*EQARRA
Trigger: AGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGACGGGACAGAGATGTaGGAACAAGCACGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREDGTEM*EQARRA
Trigger: AGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTCCCACCAGCATCAGTaGCCATTACCTGTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRSHQHQ*PLPVAA
Trigger: GGCGGCTACAGGTAATGGTCACTGATGCTGGTGGGA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494733.5
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCACCCGTTCCCGAATaGCTCGACACGCATCGTACA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPAPVPE*LDTHRT
Trigger: TGTACGATGCGTGTCGAGTCATTCGGGAACGGGTGC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTCAGGTCTTCAGCTTaGGCTTGGCTCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLRSSA*AWLPLT
Trigger: AGTGAGGGGGAGCCAAGCTCAAGCTGAAGACCTGAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGTCGGGGGTCAGCGTGTaGGTTCCCCAGGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTSGVSV*VPQEQR
Trigger: TCTCTGCTCCTGGGGAACTCACACGCTGACCCCCGA...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGGCGGCCAGCGAGGCCTaGTCGATGTCCCGGATGCAC +
Preference number: 4 (lower is better)
Translates to: AVPSLGMLKETGDRARDRAASEA*SMSRMH
Trigger: GTGCATCCGGGACATCGAGCAGGCCTCGCTGGCCGC...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCAGGATTGGTTCCTGTaGCTGGGAACCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREQDWFL*LGTLGA
Trigger: AGCTCCGAGGGTTCCCAGGCACAGGAACCAATCCTG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCGATGCGGCAGGCATTaGACAAGGCTGACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPRCGRH*TRLTCA
Trigger: AGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACAGCTTGACCACTTCTaGGAGCTGGGTGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGQLDHF*ELGDGG
Trigger: GCCACCATCACCCAGCTCGCAGAAGTGGTCAAGCTG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCTCAAGCGCCCTGGTaGCCCGGGTGGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPQAPW*PGWPHP
Trigger: AGGATGAGGCCACCCGGGGCACCAGGGCGCTTGAGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCAAGTAGCCAAGGGTaGACTCCGTCCCGAAACGCA +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPSSQG*TPSRNA
Trigger: TGCGTTTCGGGACGGAGTGCACCCTTGGCTACTTGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCGATCATGCAGCCAGTaGCGACGGGACAGAGATGTG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRERSCSQ*RRDRDV
Trigger: CACATCTCTGTCCCGTCGGCACTGGCTGCATGATCG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGTGACATCACGATCATaGAGCCAGTGCCGACGGGAC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRVTSRS*SQCRRD
Trigger: GTCCCGTCGGCACTGGCTGCATGATCGTGATGTCAC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCCTTCCGCAACTCTaGCCTTTGGACTACGGAGGA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGLPQL*PLDYGG
Trigger: TCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTGCTGGACTCCCCGATaGTCTTCAAGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPCWTPR*SSRPRP
Trigger: TGGACGTGGCCTTGAAGAGCATCGGGGAGTCCAGCA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACCTGCTTCAATCAGCTaGTCCTGGCACACAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGPASIS*SWHTGE
Trigger: CTCCCCTGTGTGCCAGGAGCAGCTGATTGAAGCAGG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAAGCATTCTGGGCAGCTaGGTTGGTTGCTACCCGGAG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGSILGS*VGCYPE
Trigger: CTCCGGGTAGCAACCAACGCAGCTGCCCAGAATGCT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCACACTGGCTCAGCTaGATGGCTGCGGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTAHWLS*MAAAWS
Trigger: TGACCAGGCCGCAGCCATGCAGCTGAGCCAGTGTGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCGAGAGTCTTGGTCTaGTCCAGCACCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGARVLV*SSTVIC
Trigger: GCAGATGACGGTGCTGGACCAGACCAAGACTCTCGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACCAGCCCCACTTCACTaGCAGCTTCGTTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGPAPLH*QLRSAS
Trigger: TGACGCTGAACGAAGCTGCCAGTGAAGTGGGGCTGG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCCTGGCAAACTGGATaGGGTCCACCAGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPWQTG*GPPGPG
Trigger: ACCAGGGCCTGGTGGACCCCATCCAGTTTGCCAGGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCCATCTGGATGGCCTaGTTAGCCCTGGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGAIWMA*LALANW
Trigger: CCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGACGAAGTGCCTCTTaGCTACTGGGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRGRSAS*LLGWPS
Trigger: AGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGAATCCGATCTCCTCTaGTTCCGCCGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGESDLL*FRRGCC
Trigger: GCAGCAGCCACGGCGGAACCAGAGGAGATCGGATTC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATGGTGTAGCTGTCTGTaGGGCAGACCTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGWCSCL*GRPGGP
Trigger: GGGCCCTCCAGGTCTGCCCCACAGACAGCTACACCA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGAGGACTGGGCCGCCTaGGCCAGCTTGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRREDWAA*ASLSGV
Trigger: CACTCCTGACAAGCTGGCCCAGGCGGCCCAGTCCTC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCGCCGGCGACTCGCTTaGAGAAAGCGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLARRRLA*RKRPAA
Trigger: AGCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGAGCCCACCTTTCCTTaGGCCACCAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTEPTFP*ATSSLW
Trigger: CCAGAGGGAGCTGGTGGCCCAAGGAAAGGTGGGCTC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATCAGCAGCTGTGCCATaGAGGAGCCCACCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGSAAVP*RSPPPW
Trigger: CCAAGGCGGTGGGCTCCTCCATGGCACAGCTGCTGA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTCTGGGAGGCGGCGATaGTCTGTGTGGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGSGRRR*SVWLPL
Trigger: CAGCGGCAGCCACACAGACCATCGCCGCCTCCCAGA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCCGGATGCACCGGTTaGTGCCATCGATGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPGCTG*CHRWSN
Trigger: ATTACTCCATCGATGGCATCAACCGGTGCATCCGGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACAGCATGGTCTTGGCTaGGACCAGGATTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGQHGLG*DQDWFL
Trigger: CAGGAACCAATCCTGGTCTCAGCCAAGACCATGCTG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTTGGCCGTCTTGGATaGGGCGATGCGGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGVGRLG*GDAAGI
Trigger: AATGCCTGCCGCATCGCCTCATCCAAGACGGCCAAC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCCCCATCCAGGGCCTTaGTGGTCTTCACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTPHPGP*WSSPGW
Trigger: CCAACCTGGTGAAGACCATCAAGGCCCTGGATGGGG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAAGGCCTTGGCCGTCTTaGGAATGTTCTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGRPWPS*ECSPCG
Trigger: ACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTGGCTGCCCCCAGCTTaGCCACTTCTGCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCWLPPA*PLLRAG
Trigger: CCCAGCTCGCAGAAGTGGTCAAGCTGGGGGCAGCCA...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCTTGGCAGCCCCCTTaGGCTGGTACATGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPWQPP*AGTWKG
Trigger: ACCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTTCTCACCTCGTCACTaGCATCGGGGTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPFSPRH*HRGGRM
Trigger: CATCCTTCCACCCCGATGTCAGTGACGAGGTGAGAA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCTCCCTCTGGGCTGCTaGGGCCGATTTGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLPLGC*GRFDQG
Trigger: GCCCTGGTCAAATCGGCCTCAGCAGCCCAGAGGGAG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCGCTGGCGTGTCCCTaGACGGAGGCATTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSLACP*TEALAA
Trigger: GGCGGCCAATGCCTCCGTTCAGGGACACGCCAGCGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATCGCTGGCGTGTCCCTaGACGGAGGCATTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKISLACP*TEALAA
Trigger: GGCGGCCAATGCCTCCGTTCAGGGACACGCCAGCGA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCCAGGCCACCAGCAGCTaGGCCGTGGAAGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIQATSS*AVEAAT
Trigger: GGTCGCCGCTTCCACGGCTCAGCTGCTGGTGGCCTG...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACAGGCCACCAGCAGCTaGGCCGTGGAAGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVQATSS*AVEAAT
Trigger: GGTCGCCGCTTCCACGGCTCAGCTGCTGGTGGCCTG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGTGCACCCCTCTCTCCTaGGACACGGTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTCTPLS*DTVRHE
Trigger: CTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCA...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCACCTCATCATCCATaGGGGCGGCCAATAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPPHHP*GRPIAS
Trigger: TGAAGCTATTGGCCGCCCTCATGGATGATGAGGTGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACGCTGGCCGCTGCGCTaGCCTGCTTCAGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLRWPLR*PASGAH
Trigger: GTGAGCTCCTGAAGCAGGTCAGCGCAGCGGCCAGCG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCGGCCAAGGCAGGCATaGGGTGTTGGATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHRPRQA*GVGSAP
Trigger: TGGAGCTGATCCAACACCTCATGCCTGCCTTGGCCG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCTGAGCATTGGGGTCTaGCTCCTGAGTGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPLSIGV*LLSVSG
Trigger: TCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGATGTCCCAGCTGAGCTaGTTCTCCCCGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTMSQLS*FSPSRC
Trigger: ACAGCGGCTCGGGGAGAAGCAGCTCAGCTGGGACAT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAATGTCCCAGCTGAGCTaGTTCTCCCCGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGMSQLS*FSPSRC
Trigger: ACAGCGGCTCGGGGAGAAGCAGCTCAGCTGGGACAT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTGGTTCCGCCGTGGCTaGTGCCATCTGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAWFRRG*CHLALE
Trigger: TTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACAGGCCCTGGTGGCCTaGCTGGCTGTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGQALVA*LAVWIR
Trigger: TCTGATCCAAACAGCCAGGCAGGCCACCAGGGCCTG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCACCAGGTTGGCAGTaGTGTTGGCGACTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESPGWQ*CWRLPW
Trigger: CCAAGGAAGTCGCCAACAGCACTGCCAACCTGGTGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCCGTGGCCCAGGTCCTaGACACGAGTGCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAPWPRS*TRVRIW
Trigger: CCAGATTCGCACTCGTGTGCAGGACCTGGGCCACGG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACAGGGCCCCTGCCTTCTaGACCAGGAAGATACAGCCG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHRAPAF*TRKIQP
Trigger: CGGCTGTATCTTCCTGGTGCAGAAGGCAGGGGCCCT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGCGGCTGTAATGCATaGCTGGGTTCCTTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREGGCNA*LGSFVP
Trigger: GGGAACAAAGGAACCCAGGCATGCATTACAGCCGCC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGGTCGGCCTTCACCTTaGAGGCCACCAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAGRPSP*RPPAAE
Trigger: CTCAGCTGCTGGTGGCCTGCAAGGTGAAGGCCGACC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACCACCGCCTTGGATGTaGTTCCCAGGTCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGPPPWM*FPGPEH
Trigger: GTGCTCAGGACCTGGGAAGCACATCCAAGGCGGTGG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCACAAGCAGCTTCTTaGTGGACTCCCCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPQAAS*WTPRCS
Trigger: AGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGGACCTGTGATGGGCTaGTGCCAGGGTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGGPVMG*CQGPPS
Trigger: ACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTCC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCCCGGTCCGGTTGAACTaGTGCTGCAAGATGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGPVRLN*CCKMVD
Trigger: GTCCACCATCTTGCAGCAGCAGTTCAACCGGACCGG...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCACAACCTTGGCACATaGCACAAGCTGGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPHNLGT*HKLGGG
Trigger: TCCACCTCCCAGCTTGTGGCATGTGCCAAGGTTGTG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGTCCACCAGCTTCCCTaGTTCAATCAGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRVHQLP*FNQLLL
Trigger: CAGGAGCAGCTGATTGAAGCAGGGAAGCTGGTGGAC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGCTTCATGGGCCTTCTaGGAGGCGGTACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGASWAF*EAVRSS
Trigger: GGAGCTGCGTACCGCCTCGCAGAAGGCCCATGAAGC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCTGGCTCTCCACGGCTaGCATCTTGGCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHLALHG*HLGILQ
Trigger: CTGCAGGATGCCAAGATGGCAGCCGTGGAGAGCCAG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAACTCGTGGCCAGGCTCTaGCTGACGGCGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKLVARL*LTAASE
Trigger: CTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCACGAG...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGATTGGTTCCTGTGCCTaGGAACCCTCGGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPIGSCA*EPSELI
Trigger: GATCAGCTCCGAGGGTTCCCAGGCACAGGAACCAAT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGAGGTGTCCGATTTCCTaGACCACCGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRERCPIS*TTEVSC
Trigger: GCAGCTGACTTCGGTGGTCCAGGAAATCGGACACCT...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCTCTGGTTCCGCCGTaGCTGCTGCCATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPLVPP*LLPSGP
Trigger: AGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPRLTCA*QQLWRL
Trigger: CAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTCTGTGGGGCAGACCTaGAGGGCCCCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFSVGQT*RAPAFC
Trigger: GCAGAAGGCAGGGGCCCTCCAGGTCTGCCCCACAGA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCTTTGTTCCCGGCCTaGAGAGCCGAGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPLFPA*RAESTK
Trigger: CTTGGTGCTCTCGGCTCTCCAGGCCGGGAACAAAGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACCCTGGTGCCCCGGGTaGCCTCATCCTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLPWCPG*PHPPLP
Trigger: AGGCAGTGGAGGATGAGGCCACCCGGGGCACCAGGG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCGCCGGCGACTCGCTTaGAGAAAGCGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLRRRLA*RKRPAA
Trigger: AGCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCGGCAGAGGAGTTGTaGGTAGGACATTGTACCGTG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGAAEEL*VGHCTV
Trigger: CACGGTACAATGTCCTACCCACAACTCCTCTGCCGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGAATCTAACATGGCATaGGCGGCCGCGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGESNMA*AAAGSV
Trigger: AACCGACCCCGCGGCCGCCCATGCCATGTTAGATTC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGAGCAGAATCTAACATaGCATGGGCGGCCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTEQNLT*HGRPRG
Trigger: ACCCCGCGGCCGCCCATGCCATGTTAGATTCTGCTC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGACTTCCCCAGCAGACTaGTTCAGATCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRTSPAD*FRSAAA
Trigger: GGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTGGCCCCGGGTGGCATaGACCACTTCCCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLWPRVA*TTSPAD
Trigger: GTCTGCTGGGGAAGTGGTCCATGCCACCCGGGGCCA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCACTCTGGCCCCGGGTaGCATGGACCACTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFHSGPG*HGPLPQ
Trigger: CTGGGGAAGTGGTCCATGCCACCCGGGGCCAGAGTG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGCTTGGCAACAATTGTaGCGGCTGACAGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREAWQQL*RLTGPV
Trigger: CACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGTCATCCTGGGCCTGCTaGACGGCGTGCATGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTSSWAC*TACMLV
Trigger: CACAAGCATGCACGCCGTCCAGCAGGCCCAGGATGA...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCAGAAGATCCCCACTaGCTTGTCCGATGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESEDPH*LVRCCQ
Trigger: CTGGCAGCATCGGACAAGCCAGTGGGGATCTTCTGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTGGGCTCGCCTCGGCTaGCAAACTGCCGCACATGCT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAWARLG*QTAAHA
Trigger: AGCATGTGCGGCAGTTTGCCAGCCGAGGCGAGCCCA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAAACAGCTGCATTCTaGGAGGCGGCGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRETAAF*EAAMVC
Trigger: ACAGACCATCGCCGCCTCCCAGAATGCAGCTGTTTC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCTCCGCCAAGCTGGTaGCCAGGTTCTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTAPPSW*PGSWHT
Trigger: AGTGTGCCAAGAACCTGGCCACCAGCTTGGCGGAGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGCAAGGTGGAAGAACTaGCTGCCTGCCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGARWKN*LPAPAL
Trigger: CAAGGCAGGGGCAGGCAGCCAGTTCTTCCACCTTGC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CAA 72 bp GGGACTGTGTTGACCGACTGCAGGGCCAACCAGGAATaGAGGAACCTGCCTGCACAGATGGCCAGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GTVLTDCRANQE*RNLPAQMARAT
Trigger: TGTGGCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCGGTCAACACAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGCATTGCACAAGGCTaGCGTGTGCTTGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREGIAQG*RVLGNN
Trigger: ATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAGGAGACCTTTTCCGTaGCGGCACGGGCGCATTCGA +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRRRPFP*RHGRIR
Trigger: TCGAATGCGCCCGTGCCGTCACGGAAAAGGTCTCCT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCTTCCGCCGCCTGGATaGGCTCTGTCACAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKLPPPG*ALSQRR
Trigger: CCGGCGCTGTGACAGAGCTCATCCAGGCGGCGGAAG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCTGCTGAGGCCGATTTaGCCAGGGCGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLLRPI*PGRLWQ
Trigger: CTGCCACAAGCGCCCTGGTCAAATCGGCCTCAGCAG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGCTTGGCCTCTTGAATaGGCATGGCGGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGAWPLE*AWRSPP
Trigger: TGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGCCTGCTTGGCCTCTTaGATGAGCATGGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFACLAS*MSMAEP
Trigger: GGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCATCTGCCCAACCATaGCCTGCTGCTGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLASAQP*PAAVAR
Trigger: CCTCGCCACAGCAGCAGGTCATGGTTGGGCAGATGC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCAGGGCCTGCTGGGCTaGGGTCAGTGGCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKQGLLG*GQWRHV
Trigger: CACATGCCGCCACTGACCTCAGCCCAGCAGGCCCTG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGGGTCCTGGCAGCTCTaGGCAAGTCCTCCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIGSWQL*ASPPRC
Trigger: GCAGCGGGGAGGACTTGCTCAGAGCTGCCAGGACCC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCTGACCTCATGGCATTaGCGAGGTCTGATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRLTSWH*RGLMWL
Trigger: AAGCCACATCAGACCTCGTCAATGCCATGAGGTCAG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCGGCCAGCGAGGCCTaGTCGATGTCCCGGATGCAC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAASEA*SMSRMH
Trigger: GTGCATCCGGGACATCGAGCAGGCCTCGCTGGCCGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCGGCCAGCGAGGCCTaGTCGATGTCCCGGATGCAC +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRAASEA*SMSRMH
Trigger: GTGCATCCGGGACATCGAGCAGGCCTCGCTGGCCGC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTACCACCGAAGTCAGCTaGTCCTGCAGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLATTEVS*SCRAST
Trigger: TGTGGAGGCCCTGCAGGAGCAGCTGACTTCGGTGGT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCCTGCAAGGCAGACTCTaGGAGAGTCTTGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGLQGRL*ESLGLV
Trigger: GACCAGACCAAGACTCTCGCAGAGTCTGCCTTGCAG...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCATGGGTGTGTTGTaGCTTGGGGTTTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGVMGVL*LGVSAT
Trigger: GGTGGCGGAAACCCCAAGGCACAACACACCCATGAC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCAATGGCGTCCACCATaGCCCCAACCAGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGQWRPP*PQPAPL
Trigger: AAGTGGGGCTGGTTGGGGGCATGGTGGACGCCATTG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCAATGGCGTCCACCATaGCCCCAACCAGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAQWRPP*PQPAPL
Trigger: AAGTGGGGCTGGTTGGGGGCATGGTGGACGCCATTG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAACAGAGAGCCTTGGATaGAATCCCCACACATTCCCC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGTESLG*NPHTFP
Trigger: GGGGAATGTGTGGGGATTGCATCCAAGGCTCTCTGT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGHKADV*LATIVA
Trigger: CGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGAGGGCCCCTGCCTTCTaGACCAGGAAGATACAGCCG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGRAPAF*TRKIQP
Trigger: CGGCTGTATCTTCCTGGTGCAGAAGGCAGGGGCCCT...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGGCGGCTGTAATGCATaGCTGGGTTCCTTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGGGCNA*LGSFVP
Trigger: GGGAACAAAGGAACCCAGGCATGCATTACAGCCGCC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACAGCTTGACCACTTCTaGGAGCTGGGTGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGQLDHF*ELGDGG
Trigger: GCCACCATCACCCAGCTCGCAGAAGTGGTCAAGCTG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCAGCTTGACCACTTCTaGGAGCTGGGTGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHQLDHF*ELGDGG
Trigger: GCCACCATCACCCAGCTCGCAGAAGTGGTCAAGCTG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCCTCATCCTCCACTaGCTTTACAGTCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGLILH*LYSLEE
Trigger: CTCCTCAAGACTGTAAAGGCAGTGGAGGATGAGGCC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGACCTCAAGCGCCCTGGTaGCCCGGGTGGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRPQAPW*PGWPHP
Trigger: AGGATGAGGCCACCCGGGGCACCAGGGCGCTTGAGG...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGAGAAAGCGGCCAGCTaGTGCTTGAATTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGEKAAS*CLNSGV
Trigger: AACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACCGCCTCACAGAGACTaGTGGTCGCAGCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLPPHRD*WSQPPP
Trigger: TGGTGGCGGCTGCGACCAGCAGTCTCTGTGAGGCGG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGGCAAGAAAGCGTaGAAACAGGGGCGGGAATTT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREGGKKA*KQGREF
Trigger: AAATTCCCGCCCCTGTTTGCACGCTTTCTTGCCTCC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCTGTATTACAGCCCCTaGTCACCAAGCCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRLYYSP*SPSPDG
Trigger: GCCGTCGGGGCTTGGTGAGCAGGGGCTGTAATACAG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGACGTCCACATCCTTCTaGCCAGGGAGGCAATTTACG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRTSTSF*PGRQFT
Trigger: CGTAAATTGCCTCCCTGGGCAGAAGGATGTGGACGT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCTGGAAAGGCTTCGTaGTTGGAGGTAGCGAATCCA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPGKAS*LEVANP
Trigger: TGGATTCGCTACCTCCAAGCACGAAGCCTTTCCAGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGGACCTGTGATGGGCTaGTGCCAGGGTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAGPVMG*CQGPPS
Trigger: ACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTCC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGCCGCTGCGCTGACCTaGTTCAGGAGCTCACTATCG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRAAALT*FRSSLS
Trigger: CGATAGTGAGCTCCTGAAGCAGGTCAGCGCAGCGGC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGCGAGCCAAGAGTGTaGCAGCTTTTCCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTGEPRV*QLFPNR
Trigger: CCTGTTGGGGAAAAGCTGGCACACTCTTGGCTCGCC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCTCTGGAAGCACGTGTaGCCCTCCTCTCAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRLWKHV*PSSQCP
Trigger: CGGACACTGAGAGGAGGGGCACACGTGCTTCCAGAG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCAATCAAGGGTGCGGTaGCGATGCGACACTTATTGC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPQSRVR*RCDTYC
Trigger: GCAATAAGTGTCGCATCGCCACCGCACCCTTGATTG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCGAGAGTCTTGGTCTaGTCCAGCACCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTARVLV*SSTVIC
Trigger: GCAGATGACGGTGCTGGACCAGACCAAGACTCTCGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCCCTCTGGTTCCGCCGTaGCTGCTGCCATCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFPLVPP*LLPSGP
Trigger: AGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGG...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCTCCCCCACAGTCTTaGAATCATCCACCATCACTG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRAPPQS*NHPPSL
Trigger: CAGTGATGGTGGATGATTCCAAGACTGTGGGGGAGC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTGGCCCGGAGCTTGTTaGGTACACAGAGTGATGAGT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRWPGAC*VHRVMS
Trigger: ACTCATCACTCTGTGTACCCAACAAGCTCCGGGCCA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGCCCACAGAGAGCCTTaGATGCAATCCCCACACATT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREAHREP*MQSPHI
Trigger: AATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCCTGCCTGGCTGTTTaGATCAGAGATGCCAACCAA +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRACLAV*IRDANQ
Trigger: TTGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCCTGGTGGCCTGCCTaGCTGTTTGGATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPWWPA*LFGSEM
Trigger: CATCTCTGATCCAAACAGCCAGGCAGGCCACCAGGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTGGGTTGGCCGTCTTaGATGAGGCGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLGWPS*MRRCGR
Trigger: CCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATCTGTGGGGCAGACCTaGAGGGCCCCTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQESVGQT*RAPAFC
Trigger: GCAGAAGGCAGGGGCCCTCCAGGTCTGCCCCACAGA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCGATCAGCTCCCTCTTaGTGTAGCTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTRSAPS*CSCLWG
Trigger: GCCCCACAGACAGCTACACCAAGAGGGAGCTGATCG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGACCACTTCTGCGAGCTaGGTGATGGTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTTTSAS*VMVAAE
Trigger: CTCAGCAGCCACCATCACCCAGCTCGCAGAAGTGGT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGCAGCCCCCTTGAGCTaGTACATGGAAGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRAAPLS*YMEGSS
Trigger: GGACGACCCTTCCATGTACCAGCTCAAGGGGGCTGC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGATGGCTTCCGCCGCCTaGATGAGCTCTGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRMASAA*MSSVTA
Trigger: CGCTGTGACAGAGCTCATCCAGGCGGCGGAAGCCAT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGCCACCAGCTCCCTCTaGGCTGCTGAGGCCGATTTG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFATSSL*AAEADL
Trigger: CAAATCGGCCTCAGCAGCCCAGAGGGAGCTGGTGGC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCTCACAGAGACTGCTaGTCGCAGCCGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPHRDC*SQPPPS
Trigger: GGATGGTGGCGGCTGCGACCAGCAGTCTCTGTGAGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCTGGGGCTCGCCATCTaGGCTCGCACCTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLGLAI*ARTFSP
Trigger: AGGGCTAAAGGTGCGAGCCCAGATGGCGAGCCCCAG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCAGTGCTCAAGACATaGAAGGAGGACCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPVLKT*KEDLSH
Trigger: GTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGAATCTAACATGGCATaGGCGGCCGCGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRESNMA*AAAGSV
Trigger: AACCGACCCCGCGGCCGCCCATGCCATGTTAGATTC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATCACTCTGGGCTTCCTaGAAAGGCTTCGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGSLWAS*KGFVLG
Trigger: TCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTCACTCTGGGCTTCCTaGAAAGGCTTCGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPSLWAS*KGFVLG
Trigger: TCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGATCCTGGCCGAGAGGTaGCAGCGAGTCGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRILAER*QRVELT
Trigger: AGTGAGCTCGACTCGCTGCCACCTCTCGGCCAGGAT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACTGCCTTGCAACTCTaGACCAGCTGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRTALQL*TSCCWA
Trigger: GGCCCAGCAGCAGCTGGTCCAGAGTTGCAAGGCAGT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCTGGTCACTCACGGTaGGCACTGCGGCTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPGHSR*ALRLWQ
Trigger: CTGCCAAAGCCGCAGTGCCCACCGTGAGTGACCAGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTGCATGGCTGCGGCCTaGTCACTCACGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFCMAAA*SLTVGT
Trigger: AGTGCCCACCGTGAGTGACCAGGCCGCAGCCATGCA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCACGGCTGCCATCTTaGCATCCTGCAGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPRLPS*HPAVHS
Trigger: AGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGTTGGCCGTCTTGGATaGGGCGATGCGGCAGGCATT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFVGRLG*GDAAGI
Trigger: AATGCCTGCCGCATCGCCTCATCCAAGACGGCCAAC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACAGGCCTTGGCCGTCTTaGGAATGTTCTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHRPWPS*ECSPCG
Trigger: ACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATGGCTGCCCCCAGCTTaGCCACTTCTGCGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVWLPPA*PLLRAG
Trigger: CCCAGCTCGCAGAAGTGGTCAAGCTGGGGGCAGCCA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCTGGGGTTGGTTTCTaGAGAATCACCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESGVGF*RITKTC
Trigger: GCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGACGGGACAGAGATGTaGGAACAAGCACGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLADGTEM*EQARRA
Trigger: AGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGTGGATGACTCTGTGTaGGCTGAAACAGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGVDDSV*AETASA
Trigger: TGCAGAGGCTGTTTCAGCTCACACAGAGTCATCCAC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGCCTGCTTGGCCTCTTaGATGAGCATGGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLACLAS*MSMAEP
Trigger: GGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGTTATTCAAGGAGTGTaGGACGGCTTTAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREVIQGV*DGFSHL
Trigger: CAGGTGGCTAAAGCCGTCTCACACTCCTTGAATAAC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTGGTCTTCTTTTGTCTaGGCTTGGCCAGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRWSSFV*AWPAIS
Trigger: TGAGATGGCTGGCCAAGCTCAGACAAAAGAAGACCA...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCTGTGAGGTTAACAACTaGAGCCGTTCCGGCCGTGAT +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGCEVNN*SRSGRD
Trigger: ATCACGGCCGGAACGGCTTCAGTTGTTAACCTCACA...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCACCGTATTCAGAGCTaGATCGATTTCCATCGGACC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRHRIQS*IDFHRT
Trigger: GGTCCGATGGAAATCGATTCAGCTCTGAATACGGTG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGACCACCGAAGTCAGCTaGTCCTGCAGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLTTEVS*SCRAST
Trigger: TGTGGAGGCCCTGCAGGAGCAGCTGACTTCGGTGGT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCAGGATTGGTTCCTGTaGCTGGGAACCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAQDWFL*LGTLGA
Trigger: AGCTCCGAGGGTTCCCAGGCACAGGAACCAATCCTG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGCAATGGCGTCCACCATaGCCCCAACCAGCCCCACTT +
Preference number: 4 (lower is better)
Translates to: AVPSLGMLKETGDRARDRQWRPP*PQPAPL
Trigger: AAGTGGGGCTGGTTGGGGGCATGGTGGACGCCATTG...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTGCCTTCATCCAGCTTaGTCATGGCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRECLHPA*SWLLQW
Trigger: CCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCCACCAAGTTCTGGCATaGCATCTGGATGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGHQVLA*HLDGLV
Trigger: AACCAGGCCATCCAGATGGCATGCCAGAACTTGGTG...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGTCTTGGATGAGGCGATaGGGCAGGCATTGCACAAGG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTSWMRR*GRHCTR
Trigger: CCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGA...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGCGGCTGTAATGCATaGCTGGGTTCCTTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTGGCNA*LGSFVP
Trigger: GGGAACAAAGGAACCCAGGCATGCATTACAGCCGCC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCCACTGTCCGTCGTCTaGAGCATTGGCAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRPLSVV*SIGRDG
Trigger: TCCATCCCTGCCAATGCTGCAGACGACGGACAGTGG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCGGTTTCCAGCTAAGTaGCCAGCCTCTCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTRFPAK*PASQEH
Trigger: GTGTTCCTGAGAGGCTGGGCACTTAGCTGGAAACCG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGTTCAGATCAGCTGCTaGCTGGTTCAGTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRVQISC*LVQFTL
Trigger: CAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAAC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTTCAGATCAGCTGCTaGCTGGTTCAGTTCACTCTG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPVQISC*LVQFTL
Trigger: CAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAAC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCAAACTGCCGCACATaGTGCAGGAGATCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTANCRT*CRRSWR
Trigger: CCTCCATGATCTCCTGCAGCATGTGCGGCAGTTTGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGGCAGCTGCGTTGGTTaGTACCCGGAGGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIGSCVG*YPEAFC
Trigger: GCAGAAGGCCTCCGGGTAGCAACCAACGCAGCTGCC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACAACTCTGGACCAGCTaGTGCTGGGCCGCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIQLWTS*CWAAGF
Trigger: GAACCCTGCGGCCCAGCAGCAGCTGGTCCAGAGTTG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTCTGGAAGCACGTGTaGCCCTCCTCTCAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLWKHV*PSSQCP
Trigger: CGGACACTGAGAGGAGGGGCACACGTGCTTCCAGAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCTGGCTGCCTGCCCCTaGCTTGGTCCTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLAACP*LGPGFS
Trigger: TGAAAACCCAGGACCAAGGCAGGGGCAGGCAGCCAG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCTGGCTGCCTGCCCCTaGCTTGGTCCTGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLAACP*LGPGFS
Trigger: TGAAAACCCAGGACCAAGGCAGGGGCAGGCAGCCAG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGGTGGAAGAACTGGCTaGCTGCCCCTGCCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLGGRTG*LPLPWS
Trigger: GGACCAAGGCAGGGGCAGGCAGCCAGTTCTTCCACC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACACTCACGGTGGGCACTaGGGCTTTGGCAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHTHGGH*GFGRLS
Trigger: AGAAAGTCTGCCAAAGCCGCAGTGCCCACCGTGAGT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAATGAACTCTCCAGCATaGTCTTGGCTGAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGMNSPA*SWLRPG
Trigger: TCCTGGTCTCAGCCAAGACCATGCTGGAGAGTTCAT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGACTCTGCGAGAGTCTTaGTCTGGTCCAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTTLRES*SGPAPS
Trigger: TGACGGTGCTGGACCAGACCAAGACTCTCGCAGAGT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTCTGTGATGGCGTCATaGGTGTGTTGTGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHSVMAS*VCCALG
Trigger: CCCCAAGGCACAACACACCCATGACGCCATCACAGA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTGTTCCCTTTGGTTCTaGAGGAGTGCCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPCSLWF*RSAFIQ
Trigger: CTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACGCATTGGGAGCTCCTaGATCTACAGAGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGRIGSS*IYRERL
Trigger: AAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCAAGTATGCAGCCTaGGCTGCAGCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRTKYAA*AAASVS
Trigger: GCTGACAGAGGCTGCAGCCCAGGCTGCATACTTGGT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGGGTCCACCAAGTTCTaGCATGCCATCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRGSTKF*HAIWMA
Trigger: GGCCATCCAGATGGCATGCCAGAACTTGGTGGACCC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGGACGAAGTGCCTCTTaGCTACTGGGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAGRSAS*LLGWPS
Trigger: AGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGAATCCGATCTCCTCTaGTTCCGCCGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFESDLL*FRRGCC
Trigger: GCAGCAGCCACGGCGGAACCAGAGGAGATCGGATTC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCTTTGTTCCCGGCCTaGAGAGCCGAGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPLFPA*RAESTK
Trigger: CTTGGTGCTCTCGGCTCTCCAGGCCGGGAACAAAGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGAGGACTGGGCCGCCTaGGCCAGCTTGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKEDWAA*ASLSGV
Trigger: CACTCCTGACAAGCTGGCCCAGGCGGCCCAGTCCTC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATTATGCATTCAATTGTaGCCTCAAGCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLCIQL*PQAPWC
Trigger: GCACCAGGGCGCTTGAGGCCACAATTGAATGCATAA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTTATGCATTCAATTGTaGCCTCAAGCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRELCIQL*PQAPWC
Trigger: GCACCAGGGCGCTTGAGGCCACAATTGAATGCATAA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTATGGCTTCCGCCGCCTaGATGAGCTCTGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCMASAA*MSSVTA
Trigger: CGCTGTGACAGAGCTCATCCAGGCGGCGGAAGCCAT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCTGAACGGAGGCATTaGCCGCCTCACAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPERRH*PPHRDC
Trigger: GCAGTCTCTGTGAGGCGGCCAATGCCTCCGTTCAGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACATGGCCTCTGAATCCTaGTCGGCCTTCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHMASES*SAFTLQ
Trigger: CTGCAAGGTGAAGGCCGACCAGGATTCAGAGGCCAT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACTGGGGCTCGCCATCTaGGCTCGCACCTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKILGLAI*ARTFSP
Trigger: AGGGCTAAAGGTGCGAGCCCAGATGGCGAGCCCCAG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGCCAGGGCCATCCCCTaGGGCTCGCCATCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKARAIP*GSPSGL
Trigger: GAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCAGCAGCTGTGCCATaGAGGAGCCCACCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSAAVP*RSPPPW
Trigger: CCAAGGCGGTGGGCTCCTCCATGGCACAGCTGCTGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGACTCCACGGGCGGCCTaGGCCAGTGTTTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLTPRAA*ASVFRA
Trigger: AGCTCTGAAAACACTGGCCCAGGCCGCCCGTGGAGT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGAGCAGAATCTAACATaGCATGGGCGGCCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCEQNLT*HGRPRG
Trigger: ACCCCGCGGCCGCCCATGCCATGTTAGATTCTGCTC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCCAAGCAGCTTCTTGCTaGACTCCCCGATGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGQAASC*TPRCSS
Trigger: TGAAGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTG...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTGGTTCAGTTCACTCTaGGCTTCCTGGAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPWFSSL*ASWKGF
Trigger: GAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGCCAACTCTCCACTCTaGCCCCGGGTGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCANSPL*PRVAWT
Trigger: GGTCCATGCCACCCGGGGCCAGAGTGGAGAGTTGGC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGCCAGAACCCGCGCCTaGCGCACCATTTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVARTRA*RTISPA
Trigger: CGCTGGTGAAATGGTGCGCCAGGCGCGGGTTCTGGC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTGGACCAGCTGCTGCTaGGCCGCAGGGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFWTSCC*AAGFLL
Trigger: CAACAAGAACCCTGCGGCCCAGCAGCAGCTGGTCCA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCATCTTGCTTCCAGGCTaGAGGAAGTTCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGILLPG*RKFWLE
Trigger: CTCCAGCCAGAACTTCCTCCAGCCTGGAAGCAAGAT...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGCAGCTCCGCCAAGCTaGTGGCCAGGTTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIAAPPS*WPGSWH
Trigger: GTGCCAAGAACCTGGCCACCAGCTTGGCGGAGCTGC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCACAGAAACCAGCGTaGGACCTAAAGATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGAQKPA*DLKMSH
Trigger: GTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTACTCCTGAGTGTCTCTaGAAGCACGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLATPECL*KHVCPS
Trigger: GGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTGCCTGCCCCTGCCTTaGTCCTGGGTTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLACLPLP*SWVFRM
Trigger: CATCCTGAAAACCCAGGACCAAGGCAGGGGCAGGCA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCCCGGATGCACCGGTTaGTGCCATCGATGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGPGCTG*CHRWSN
Trigger: ATTACTCCATCGATGGCATCAACCGGTGCATCCGGG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCATTGCACAAGGCTaGCGTGTGCTTGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHGIAQG*RVLGNN
Trigger: ATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGCGACTTCCTTGGCTaGCTGGACGAAGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGDFLG*LDEVPL
Trigger: AAGAGGCACTTCGTCCAGTCAGCCAAGGAAGTCGCC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAGGAGACCTTTTCCGTaGCGGCACGGGCGCATTCGA +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIRRPFP*RHGRIR
Trigger: TCGAATGCGCCCGTGCCGTCACGGAAAAGGTCTCCT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACCTTGGCAGCCCCCTTaGGCTGGTACATGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLPWQPP*AGTWKG
Trigger: ACCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCTGGCTGTTGCCATGGTaGTGCCTTTCGTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGWLLPW*CLSSSL
Trigger: TAAGGATGACGAAAGGCATCACCATGGCAACAGCCA...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGAGCCGTCAACATATCTaGCACGGCTTTCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGSRQHI*HGFPAQ
Trigger: CTGAGCCGGAAAGCCGTGTCAGATATGTTGACGGCT...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCTCTGGGGTTGGTTTCTaGAGAATCACCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGSGVGF*RITKTC
Trigger: GCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGA...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTCGCTGGCGTGTCCCTaGACGGAGGCATTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKSLACP*TEALAA
Trigger: GGCGGCCAATGCCTCCGTTCAGGGACACGCCAGCGA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTGGCAGATGAGATaGGCTTCTCCTCGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLAWQMR*ASPRWR
Trigger: ACGCCAGCGAGGAGAAGCTCATCTCATCTGCCAAGC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGCTTGGCAGATGAGATaGGCTTCTCCTCGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFAWQMR*ASPRWR
Trigger: ACGCCAGCGAGGAGAAGCTCATCTCATCTGCCAAGC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGCCTGCTTGGCCTCTTaGATGAGCATGGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCACLAS*MSMAEP
Trigger: GGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGATATCCCAAAGCATGTaGGAAGCCTCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTISQSM*EASCST
Trigger: GGTGCTGCAGGAGGCTTCTCACATGCTTTGGGATAT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAACCTTCCCGGTCCGGTTaGACTGCTGCTGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEPSRSG*TAAARW
Trigger: CCATCTTGCAGCAGCAGTTCAACCGGACCGGGAAGG...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGCATGCTGCCAACGTTaGAGGTCTCAGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIACCQR*RSQARW
Trigger: CCAGCGGGCCTGAGACCTTCAACGTTGGCAGCATGC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGAGAGAGGCGGAGGGTaGGTGCCTTTAACTGTTACC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRERGGG*VPLTVT
Trigger: GGTAACAGTTAAAGGCACTCACCCTCCGCCTCTCTC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGAGAGAGGCGGAGGGTaGGTGCCTTTAACTGTTACC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGERGGG*VPLTVT
Trigger: GGTAACAGTTAAAGGCACTCACCCTCCGCCTCTCTC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTGTGTTATTTTCCTTTaGAGGACCAGAAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRECVIFL*RTRRPP
Trigger: AGGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGGCCGTTTTTACTCTaGCACCACTCTCTTATTAGG +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRGPFLL*HHSLIR
Trigger: CCTAATAAGAGAGTGGTGTCAGAGTAAAAACGGCCC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGAGATGCAGACAAAGTaGCTCAGGTACACTGATGCT +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREEMQTK*LRYTDA
Trigger: AGCATCAGTGTACCTGAGTCACTTTGTCTGCATCTC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAGGGTGCGGTGGCGATaGGACACTTATTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRRVRWR*DTYCGC
Trigger: ACAACCGCAATAAGTGTCGCATCGCCACCGCACCCT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGATGGCCAGAGAGCGTaGAGTGCGAATGAGGTACGA +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGDGQRA*SANEVR
Trigger: TCGTACCTCATTCGCACTGCACGCTCTCTGGCCATC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCATGTCCCAGCTGAGCTaGTTCTCCCCGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFMSQLS*FSPSRC
Trigger: ACAGCGGCTCGGGGAGAAGCAGCTCAGCTGGGACAT...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAATGTCCCAGCTGAGCTaGTTCTCCCCGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIMSQLS*FSPSRC
Trigger: ACAGCGGCTCGGGGAGAAGCAGCTCAGCTGGGACAT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTGCAAGGCAGACTCTaGGAGAGTCTTGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGLQGRL*ESLGLV
Trigger: GACCAGACCAAGACTCTCGCAGAGTCTGCCTTGCAG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGTCATGGGTGTGTTGTaGCTTGGGGTTTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCVMGVL*LGVSAT
Trigger: GGTGGCGGAAACCCCAAGGCACAACACACCCATGAC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGTCATGGGTGTGTTGTaGCTTGGGGTTTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLVMGVL*LGVSAT
Trigger: GGTGGCGGAAACCCCAAGGCACAACACACCCATGAC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCAGCTAACAGCAGCTTaGTGGATGCCATCGAGATAT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPQLTAA*WMPSRY
Trigger: ATATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGCTGACTGGACGAAGTaGCTCTTGGCTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGADWTK*LLATGL
Trigger: CAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGCCTCATCCTCCACTaGCTTTACAGTCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTGLILH*LYSLEE
Trigger: CTCCTCAAGACTGTAAAGGCAGTGGAGGATGAGGCC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGAGAAAGCGGCCAGCTaGTGCTTGAATTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGEKAAS*CLNSGV
Trigger: AACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGGTCGGCCTTCACCTTaGAGGCCACCAGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVGRPSP*RPPAAE
Trigger: CTCAGCTGCTGGTGGCCTGCAAGGTGAAGGCCGACC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGTAAAAACTTATACTaGTGCTGGCGGATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRGKNLY*CWRIWA
Trigger: GGCCCAAATCCGCCAGCAGCAGTATAAGTTTTTACC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCCTGGGTGAGCCAGTaGTCAAGACATGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPWVSQ*SRHGRR
Trigger: CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCTTTGTTGACGCTCTaGATCTCCAGGTGCAATCAG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESLLTL*ISRCNQ
Trigger: CTGATTGCACCTGGAGATGCAGAGCGTCAACAAAGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGACGTCCACATCCTTCTaGCCAGGGAGGCAATTTACG +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTTSTSF*PGRQFT
Trigger: CGTAAATTGCCTCCCTGGGCAGAAGGATGTGGACGT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCACACTGGCTCAGCTaGATGGCTGCGGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAHWLS*MAAAWS
Trigger: TGACCAGGCCGCAGCCATGCAGCTGAGCCAGTGTGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCATCTTGGCATCCTaGAGTTCATTCTTAAGCGTC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPAILAS*SSFLSV
Trigger: GACGCTTAAGAATGAACTGCAGGATGCCAAGATGGC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCTCTTCAGAACTGGTaGCCACACACTGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPLQNW*PHTVSV
Trigger: GACACTGACAGTGTGTGGGCACCAGTTCTGAAGAGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCTCGTGGCCAGGCTCTaGCTGACGGCGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGLVARL*LTAASE
Trigger: CTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCACGAG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCAATCAAGGGTGCGGTaGCGATGCGACACTTATTGC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTQSRVR*RCDTYC
Trigger: GCAATAAGTGTCGCATCGCCACCGCACCCTTGATTG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTATTGGTTCCTGTGCCTaGGAACCCTCGGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAIGSCA*EPSELI
Trigger: GATCAGCTCCGAGGGTTCCCAGGCACAGGAACCAAT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTAGGTGTCCGATTTCCTaGACCACCGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLARCPIS*TTEVSC
Trigger: GCAGCTGACTTCGGTGGTCCAGGAAATCGGACACCT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCCAGCCCCACTTCACTaGCAGCTTCGTTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLPAPLH*QLRSAS
Trigger: TGACGCTGAACGAAGCTGCCAGTGAAGTGGGGCTGG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCAGCCCCACTTCACTaGCAGCTTCGTTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPAPLH*QLRSAS
Trigger: TGACGCTGAACGAAGCTGCCAGTGAAGTGGGGCTGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCATCCAGCTTGCTCATaGCTTCTGCAATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHHPACS*LLQWRP
Trigger: TGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGACAAATGTTCCCTTTaGTTCTGGAGGAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREDKCSL*FWRSAF
Trigger: GAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGGAGGTCTCCGGTCTTaGCATTCTGTGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGGGLRS*HSVKSL
Trigger: CAGGGATTTCACAGAATGCCAAGACCGGAGACCTCC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCCCACAGAGAGCCTTaGATGCAATCCCCACACATT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTAHREP*MQSPHI
Trigger: AATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGCCCACAGAGAGCCTTaGATGCAATCCCCACACATT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGAHREP*MQSPHI
Trigger: AATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCCTGCCTGGCTGTTTaGATCAGAGATGCCAACCAA +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTACLAV*IRDANQ
Trigger: TTGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCCCTGGTGGCCTGCCTaGCTGTTTGGATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLPWWPA*LFGSEM
Trigger: CATCTCTGATCCAAACAGCCAGGCAGGCCACCAGGG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCTGGGTTGGCCGTCTTaGATGAGGCGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKLGWPS*MRRCGR
Trigger: CCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGGACGAAGTGCCTCTTaGCTACTGGGTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCGRSAS*LLGWPS
Trigger: AGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTGTTGGCGACTTCCTTaGCTGACTGGACGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGCWRLP*LTGRSA
Trigger: GGCACTTCGTCCAGTCAGCCAAGGAAGTCGCCAACA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATGGTGTAGCTGTCTGTaGGGCAGACCTGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVWCSCL*GRPGGP
Trigger: GGGCCCTCCAGGTCTGCCCCACAGACAGCTACACCA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCGATCAGCTCCCTCTTaGTGTAGCTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCRSAPS*CSCLWG
Trigger: GCCCCACAGACAGCTACACCAAGAGGGAGCTGATCG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACCTTTGTTCCCGGCCTaGAGAGCCGAGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIPLFPA*RAESTK
Trigger: CTTGGTGCTCTCGGCTCTCCAGGCCGGGAACAAAGG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTACCACTTCTGCGAGCTaGGTGATGGTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCTTSAS*VMVAAE
Trigger: CTCAGCAGCCACCATCACCCAGCTCGCAGAAGTGGT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGGTACGTCTTTTGACTaGAACACCGTAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGGTSFD*NTVSSC
Trigger: GCAGGAGCTTACGGTGTTCCAGTCAAAAGACGTACC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTTCTGCAATGACAGTTaGGTCTTCTGGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREFCNDS*VFWIHP
Trigger: TGGGTGGATCCAGAAGACCCAACTGTCATTGCAGAA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCCTCACAGAGACTGCTaGTCGCAGCCGCCACCATCC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKPHRDC*SQPPPS
Trigger: GGATGGTGGCGGCTGCGACCAGCAGTCTCTGTGAGG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACCAAAAGCTGCCTTCTaGGCTGCACGGACAAGATTG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGPKAAF*AARTRL
Trigger: CAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCTGGGGCTCGCCATCTaGGCTCGCACCTTTAGCCCT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKLGLAI*ARTFSP
Trigger: AGGGCTAAAGGTGCGAGCCCAGATGGCGAGCCCCAG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGCGGCAGAGGAGTTGTaGGTAGGACATTGTACCGTG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGAAEEL*VGHCTV
Trigger: CACGGTACAATGTCCTACCCACAACTCCTCTGCCGC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAGGAGCCCACCGCCTTaGATGTGCTTCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIRSPPP*MCFPGP
Trigger: AGGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACTTCCCCAGCAGACTaGTTCAGATCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRTSPAD*FRSAAA
Trigger: GGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGCTTGGCAACAATTGTaGCGGCTGACAGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAAWQQL*RLTGPV
Trigger: CACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACATGACCTGCTGCTGTaGCGAGGGCATGCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLHDLLL*RGHAAN
Trigger: GTTGGCAGCATGCCCTCGCCACAGCAGCAGGTCATG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCACTGAGATCATCCTaGGCCTGCTGGACGGCGTGC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSLRSS*ACWTAC
Trigger: GCACGCCGTCCAGCAGGCCCAGGATGATCTCAGTGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCACATGGCAGCTGCATTaGCAACAGCTTTGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGTWQLH*QQLWPN
Trigger: GTTTGGCCAAAGCTGTTGCCAATGCAGCTGCCATGT...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAATCGGTAGTGGCCGCCTaGCAGGCACGGACACAGTTC +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKSVVAA*QARTQF
Trigger: GAACTGTGTCCGTGCCTGCCAGGCGGCCACTACCGA...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCTGGTCCTCATTCTCTaGGTTGGCTGCAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLVLIL*VGCSPL
Trigger: AAGGGGGCTGCAGCCAACCCAGAGAATGAGGACCAG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGGCTGGAGGAAGTTCTaGCTGGAGATGATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRGWRKF*LEMMRA
Trigger: GGCTCTCATCATCTCCAGCCAGAACTTCCTCCAGCC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAAGCAAGGTGGAAGAACTaGCTGCCTGCCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEARWKN*LPAPAL
Trigger: CAAGGCAGGGGCAGGCAGCCAGTTCTTCCACCTTGC...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTTCAGGTTCCCCTTTTaGCCATCGGGAACAGCAATT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPFRFPF*PSGTAI
Trigger: AATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGGCCAGGGCCACAGCTaGCTGGACACTGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIGQGHS*LDTGKT
Trigger: AGTTTTGCCAGTGTCCAGCCAGCTGTGGCCCTGGCC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCCCGGATGCACCGGTTaGTGCCATCGATGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLPGCTG*CHRWSN
Trigger: ATTACTCCATCGATGGCATCAACCGGTGCATCCGGG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGCAGCATGGTCTTGGCTaGGACCAGGATTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AVPSLGMLKETGDRARDRQHGLG*DQDWFL
Trigger: CAGGAACCAATCCTGGTCTCAGCCAAGACCATGCTG...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTAGCGTGCAGTGCGAATaGGGTACGATGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLASVQCE*GTMNSP
Trigger: TGGAGAGTTCATCGTACCTCATTCGCACTGCACGCT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGACTGGGCGGCCTCTGTaGTGGCGTCATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKTGRPL*WRHGCV
Trigger: AACACACCCATGACGCCATCACAGAGGCCGCCCAGT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAACTGGGCGGCCTCTGTaGTGGCGTCATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKTGRPL*WRHGCV
Trigger: AACACACCCATGACGCCATCACAGAGGCCGCCCAGT...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGTCACTGGTCATTTGTaGAGCCAGTCCTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRVTGHL*SQSSQL
Trigger: GAGTTGGGAGGACTGGCTTCACAAATGACCAGTGAC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCCATCGAGATATTCTTaGGGTTCCCTATCACTTGGA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPPSRYS*GSLSLG
Trigger: TCCAAGTGATAGGGAACCTCAAGAATATCTCGATGG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACACAGAGTGATGAGTTaGTTGATGCTCTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGHRVMS*LMLSVT
Trigger: TGTGACAGAGAGCATCAATCAACTCATCACTCTGTG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCCCCATCCAGGGCCTTaGTGGTCTTCACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKPHPGP*WSSPGW
Trigger: CCAACCTGGTGAAGACCATCAAGGCCCTGGATGGGG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTTCTGCGAGCTGGGTaGTGGTGGCTGCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLLRAG*WWLLRT
Trigger: AGTCCTCAGCAGCCACCATCACCCAGCTCGCAGAAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAACTTCTGCGAGCTGGGTaGTGGTGGCTGCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKLLRAG*WWLLRT
Trigger: AGTCCTCAGCAGCCACCATCACCCAGCTCGCAGAAG...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCCTTGGCAGCCCCCTTaGGCTGGTACATGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCPWQPP*AGTWKG
Trigger: ACCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGACTCTGTTTCTGCAATaGCAGTTGGGTCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPTLFLQ*QLGLLD
Trigger: ATCCAGAAGACCCAACTGTCATTGCAGAAACAGAGT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCTTCCGTCTTCTCCTaGGAGGAAGAAGAATATTCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPASVFS*EEEEYS
Trigger: AGAATATTCTTCTTCCTCTCAGGAGAAGACGGAAGC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATGTTTCTGGCTTTTATaGACCATGTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGCFWLL*TMSNSS
Trigger: GCTGGAGTTGGACATGGTTCATAAAAGCCAGAAACA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCTTGGCCTCTTGAATaGGCATGGCGGAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRAWPLE*AWRSPP
Trigger: TGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTGTGAAGCTCTTGGGTaGGGCTGCCCAGCGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKICEALG*GCPALD
Trigger: GTCAAGCGCTGGGCAGCCTCACCCAAGAGCTTCACA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCAGCTTTCAGCAAGTCTaGCACCGCCCCAGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCSFQQV*HRPSEG
Trigger: ACCCTCGCTGGGGCGGTGTCAGACTTGCTGAAAGCT...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCGGCCAAGGCAGGCATaGGGTGTTGGATCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCRPRQA*GVGSAP
Trigger: TGGAGCTGATCCAACACCTCATGCCTGCCTTGGCCG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAATTGGTGAGAGGCCGCTaGATGAGACCCAGCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKLVRGR*MRPSLV
Trigger: CACGAGGCTGGGTCTCATTCAGCGGCCTCTCACCAA...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGATGGCCAGAGAGCGTaGAGTGCGAATGAGGTACGA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLDGQRA*SANEVR
Trigger: TCGTACCTCATTCGCACTGCACGCTCTCTGGCCATC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGCTGCATACAACATCTaGAAGGCAGACTCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGAAYNI*KADSAR
Trigger: TCTCGCAGAGTCTGCCTTGCAGATGTTGTATGCAGC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAHKADV*LATIVA
Trigger: CGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAACGATGCGGCAGGCATTaGACAAGGCTGACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQERCGRH*TRLTCA
Trigger: AGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCG...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGCTGACTGGACGAAGTaGCTCTTGGCTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCADWTK*LLATGL
Trigger: CAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCAGCGTCCCCGCTGTTaGAAACATAATGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAQRPRC*KHNGGV
Trigger: GACACCACCATTATGTTTGCAACAGCGGGGACGCTG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACCAAGTAGCCAAGGGTaGACTCCGTCCCGAAACGCA +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLPSSQG*TPSRNA
Trigger: TGCGTTTCGGGACGGAGTGCACCCTTGGCTACTTGG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTAAAGCGGCCAGCTGCTaGTTGAATTCTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAKAASC*LNSGVG
Trigger: ACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCGCTTGTTTTGGTTTTaGTCTTGGCTTCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRRLFWF*SWLQLL
Trigger: GAGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCACCGCCTCACAGAGACTaGTGGTCGCAGCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAPPHRD*WSQPPP
Trigger: TGGTGGCGGCTGCGACCAGCAGTCTCTGTGAGGCGG...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGAAAAACTTATACTGCTaGTGGCGGATTTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRKNLYC*WRIWAS
Trigger: ACTGGCCCAAATCCGCCAGCAGCAGTATAAGTTTTT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAAGGCCTTCCGCAACTCTaGCCTTTGGACTACGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEGLPQL*PLDYGG
Trigger: TCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCC...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTGTATTACAGCCCCTaGTCACCAAGCCCCGACGGC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLYYSP*SPSPDG
Trigger: GCCGTCGGGGCTTGGTGAGCAGGGGCTGTAATACAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCACAAGCAGCTTCTTaGTGGACTCCCCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPQAAS*WTPRCS
Trigger: AGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATGGTCTTCACCACGTTaGAGTGGCGCACACAAATCT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGWSSPR*SGAHKS
Trigger: AGATTTGTGTGCGCCACTGCAACGTGGTGAAGACCA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAGGACACGCCATATGTaGGGAGGGACCGTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIRTRHM*GGTVRV
Trigger: AACTCGCACGGTCCCTCCGCACATATGGCGTGTCCT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATGCCCAACCATGACCTaGTGCTGTGGCGAGGGCATG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRCPTMT*CCGEGM
Trigger: CATGCCCTCGCCACAGCAGCAGGTCATGGTTGGGCA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATGGCCTCGGTGCATCTaGCCAACCATGACCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVWPRCI*PTMTCC
Trigger: GCAGCAGGTCATGGTTGGGCAGATGCACCGAGGCCA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCGTCCCCATCAGGGCCTaGTGGGCTGAGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAVPIRA*WAEVSG
Trigger: GCCACTGACCTCAGCCCAGCAGGCCCTGATGGGGAC...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTGTGTAGTCAGTGTCTaGAGGGTCACCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRCVVSV*RVTSCE
Trigger: CTCACAGCTGGTGACCCTGCAGACACTGACTACACA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCTTCTCTCAGCCTTTaGTGCTGGTCCTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTASLSL*CWSSFS
Trigger: AGAGAATGAGGACCAGCAGCAAAGGCTGAGAGAAGC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGGCGAGCCAAGAGTGTaGCAGCTTTTCCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIGEPRV*QLFPNR
Trigger: CCTGTTGGGGAAAAGCTGGCACACTCTTGGCTCGCC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAACTCGTGGCCAGGCTCTaGCTGACGGCGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: TLTGTGILKPSLHWPLRKLVARL*LTAASE
Trigger: CTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCACGAG...TTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTATTGGTTCCTGTGCCTaGGAACCCTCGGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCIGSCA*EPSELI
Trigger: GATCAGCTCCGAGGGTTCCCAGGCACAGGAACCAAT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTACAGACCAGGTGGGTaGGTCTTTGGGGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLYRPGG*VFGVDG
Trigger: GCCATCAACCCCAAAGACCCACCCACCTGGTCTGTA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTAGGTGTCCGATTTCCTaGACCACCGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCRCPIS*TTEVSC
Trigger: GCAGCTGACTTCGGTGGTCCAGGAAATCGGACACCT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACTCTGCGAGAGTCTTaGTCTGGTCCAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFTLRES*SGPAPS
Trigger: TGACGGTGCTGGACCAGACCAAGACTCTCGCAGAGT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGACTCTGCGAGAGTCTTaGTCTGGTCCAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLTLRES*SGPAPS
Trigger: TGACGGTGCTGGACCAGACCAAGACTCTCGCAGAGT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGGTGTGTTGTGCCTTaGGGTTTCCGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGCVVP*GFRHLL
Trigger: AAGAAGGTGGCGGAAACCCCAAGGCACAACACACCC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTCTGTGATGGCGTCATaGGTGTGTTGTGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLSVMAS*VCCALG
Trigger: CCCCAAGGCACAACACACCCATGACGCCATCACAGA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTCTGTGATGGCGTCATaGGTGTGTTGTGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFSVMAS*VCCALG
Trigger: CCCCAAGGCACAACACACCCATGACGCCATCACAGA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCATCCAGCTTGCTCATaGCTTCTGCAATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGHPACS*LLQWRP
Trigger: TGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGTGCCCATAGTCACTaGTCATTTGTGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHGAHSH*SFVKPV
Trigger: GACTGGCTTCACAAATGACCAGTGACTATGGGCACC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCGCATTGGGAGCTCCTaGATCTACAGAGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHRIGSS*IYRERL
Trigger: AAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAACCAAGTATGCAGCCTaGGCTGCAGCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLTKYAA*AAASVS
Trigger: GCTGACAGAGGCTGCAGCCCAGGCTGCATACTTGGT...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGCCTGCCTGGCTGTTTaGATCAGAGATGCCAACCAA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAACLAV*IRDANQ
Trigger: TTGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTTCTGGCATGCCATCTaGATGGCCTGGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLFWHAI*MAWLAL
Trigger: CAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAACACGAGTGCGAATCTaGAATCCGATCTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGTRVRI*NPISSG
Trigger: ACCAGAGGAGATCGGATTCCAGATTCGCACTCGTGT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTGATCAAAACCACCTaGGTCTCGGGGTCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLIKTT*VSGSSE
Trigger: CTCCGACGACCCCGAGACCCAGGTGGTTTTGATCAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCCCTGGTGCCCCGGGTaGCCTCATCCTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGPWCPG*PHPPLP
Trigger: AGGCAGTGGAGGATGAGGCCACCCGGGGCACCAGGG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGGTACGTCTTTTGACTaGAACACCGTAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGGTSFD*NTVSSC
Trigger: GCAGGAGCTTACGGTGTTCCAGTCAAAAGACGTACC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACAGCATTGGCAGGGATaGAGCCCACCTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLQHWQG*SPPFLG
Trigger: CCCAAGGAAAGGTGGGCTCCATCCCTGCCAATGCTG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCCTGAACGGAGGCATTaGCCGCCTCACAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKPERRH*PPHRDC
Trigger: GCAGTCTCTGTGAGGCGGCCAATGCCTCCGTTCAGG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTATGGCCTCTGAATCCTaGTCGGCCTTCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCMASES*SAFTLQ
Trigger: CTGCAAGGTGAAGGCCGACCAGGATTCAGAGGCCAT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCTTCCCTCAGCTCGGTaGGTAAAAACTTATACTGCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPLPSAR*VKTYTA
Trigger: AGCAGTATAAGTTTTTACCCACCGAGCTGAGGGAAG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGCCAGGGCCATCCCCTaGGGCTCGCCATCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSARAIP*GSPSGL
Trigger: GAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCCAGTGCTCAAGACATaGAAGGAGGACCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGPVLKT*KEDLSH
Trigger: GTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCACTGACTGTCAACTaGGAGCCGTGGGTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPLTVN*EPWVCV
Trigger: CACACAAACCCACGGCTCCCAGTTGACAGTCAGTGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCACTGACTGTCAACTaGGAGCCGTGGGTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPLTVN*EPWVCV
Trigger: CACACAAACCCACGGCTCCCAGTTGACAGTCAGTGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAGGAGCCCACCGCCTTaGATGTGCTTCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRRSPPP*MCFPGP
Trigger: AGGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAGTGTTTTCAGAGCTTaGGCCGTCTCTCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRSVFRA*AVSLAA
Trigger: GGCTGCTAGAGAGACGGCCCAAGCTCTGAAAACACT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGAATCTAACATGGCATaGGCGGCCGCGGGGTCGGTT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKESNMA*AAAGSV
Trigger: AACCGACCCCGCGGCCGCCCATGCCATGTTAGATTC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGAGCAGAATCTAACATaGCATGGGCGGCCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKEQNLT*HGRPRG
Trigger: ACCCCGCGGCCGCCCATGCCATGTTAGATTCTGCTC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGAGATCAGCTGCTGCCTaGTTCAGTTCACTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGRSAAA*FSSLWA
Trigger: AGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCT...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTGGCCCCGGGTGGCATaGACCACTTCCCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKWPRVA*TTSPAD
Trigger: GTCTGCTGGGGAAGTGGTCCATGCCACCCGGGGCCA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCACTCTGGCCCCGGGTaGCATGGACCACTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKHSGPG*HGPLPQ
Trigger: CTGGGGAAGTGGTCCATGCCACCCGGGGCCAGAGTG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGGTCGTAGCGGCCGATaGGCTCGCCTCGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGGRSGR*ARLGWQ
Trigger: TTGCCAGCCGAGGCGAGCCCATCGGCCGCTACGACC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCTCCGCCAAGCTGGTaGCCAGGTTCTTGGCACACT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAPPSW*PGSWHT
Trigger: AGTGTGCCAAGAACCTGGCCACCAGCTTGGCGGAGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGGAAGTGGCTTCAGCTaGCTCTCCACGGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCGSGFS*LSTAAI
Trigger: GATGGCAGCCGTGGAGAGCCAGCTGAAGCCACTTCC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAAAAGGCGTTTTGGGTTaGAGGACAGGGGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGKGVLG*RTGDRF
Trigger: AAACCTGTCCCCTGTCCTCCAACCCAAAACGCCTTT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTTCCATGCACTGCCTTaGCTAAAGGTGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPFHALP*LKVQIK
Trigger: CTTAATCTGCACCTTTAGCCAAGGCAGTGCATGGAA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTGTGACTCTGAGCATTaGGGTCTGACTCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHCDSEH*GLTPEC
Trigger: ACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAAGACTCTGAGGCAAGGTaGAAGAACTGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEDSEAR*KNWLPA
Trigger: GGCAGGCAGCCAGTTCTTCCACCTTGCCTCAGAGTC...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCCAGCCTCGTGTTTTGTaGGATGAAGAGATGCAGACA +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGQPRVL*DEEMQT
Trigger: TGTCTGCATCTCTTCATCCCACAAAACACGAGGCTG...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR CAA 72 bp ATGAGGGGAGGCGGCAGAGGAGTTGTGGGTAGGACATaGTACCGTGTGACATCACGATCATGCAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: MRGGGRGVVGRT*YRVTSRSCSQC
Trigger: GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCCTCTGCCGCCTCCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGCGAATGAGGTACGATaGACTCTCCAGCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGANEVR*TLQHGL
Trigger: AAGACCATGCTGGAGAGTTCATCGTACCTCATTCGC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTAGCGTGCAGTGCGAATaGGGTACGATGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCSVQCE*GTMNSP
Trigger: TGGAGAGTTCATCGTACCTCATTCGCACTGCACGCT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATTAGTCATCATTTCCTaGGCTGTCACCGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGLVIIS*AVTAMA
Trigger: AGCCATTGCGGTGACAGCTCAGGAAATGATGACTAA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGGCATTGCACAAGGCTaGCGTGTGCTTGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFGIAQG*RVLGNN
Trigger: ATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGGCGACTTCCTTGGCTaGCTGGACGAAGTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCGDFLG*LDEVPL
Trigger: AAGAGGCACTTCGTCCAGTCAGCCAAGGAAGTCGCC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGTTCAGGTACGTCTTTTaGCTGGAACACCGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTFRYVF*LEHRKL
Trigger: GAGCTTACGGTGTTCCAGTCAAAAGACGTACCTGAA...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAAGCCGTCAACATATCTaGCACGGCTTTCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSRQHI*HGFPAQ
Trigger: CTGAGCCGGAAAGCCGTGTCAGATATGTTGACGGCT...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATTCTCACCTCGTCACTaGCATCGGGGTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIFSPRH*HRGGRM
Trigger: CATCCTTCCACCCCGATGTCAGTGACGAGGTGAGAA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTCTGGGGTTGGTTTCTaGAGAATCACCAAGACGTGC +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLASGVGF*RITKTC
Trigger: GCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAAGAAATCAGCCCCTGTaGCCACTGTCCGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKRNQPL*PLSVVC
Trigger: GCAGACGACGGACAGTGGTCACAGGGGCTGATTTCT...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGTTGGTAACAGTCCATaGAACGTGCACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCVGNSP*NVHPSL
Trigger: GAGAGAGGGGTGCACGTTTCATGGACTGTTACCAAC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGTGGATGACTCTGTGTaGGCTGAAACAGCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCVDDSV*AETASA
Trigger: TGCAGAGGCTGTTTCAGCTCACACAGAGTCATCCAC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGTTATTCAAGGAGTGTaGGACGGCTTTAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRVIQGV*DGFSHL
Trigger: CAGGTGGCTAAAGCCGTCTCACACTCCTTGAATAAC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATATCCCAAAGCATGTaGGAAGCCTCCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFISQSM*EASCST
Trigger: GGTGCTGCAGGAGGCTTCTCACATGCTTTGGGATAT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCGTGCATGCTTGTGTTaGTGGTCCCCATCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKRACLC*WSPSGP
Trigger: AGGCCCTGATGGGGACCATCAACACAAGCATGCACG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCACCGTATTCAGAGCTaGATCGATTTCCATCGGACC +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGHRIQS*IDFHRT
Trigger: GGTCCGATGGAAATCGATTCAGCTCTGAATACGGTG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTAAAGATGAGTCACTaGGGAAGCTCTTTATTCCAG +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLKMSH*GSSLFQ
Trigger: CTGGAATAAAGAGCTTCCTCAGTGACTCATCTTTAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTGGGCTAGAGTCTGGTaGAACAAGATCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCWARVW*NKIGQG
Trigger: ACCTTGCCCGATCTTGTTTCACCAGACTCTAGCCCA...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACTGAGCATTGGGGTCTaGCTCCTGAGTGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLLSIGV*LLSVSG
Trigger: TCCAGAGACACTCAGGAGTCAGACCCCAATGCTCAG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTGTGTTATTTTCCTTTaGAGGACCAGAAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHCVIFL*RTRRPP
Trigger: AGGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTCTTCTGGATCTTaGAGGTTGGTGAGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAFSSGS*RLVRGR
Trigger: GCGGCCTCTCACCAACCTTCAAGATCCAGAAGAAAA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTACCACCGAAGTCAGCTaGTCCTGCAGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPTTEVS*SCRAST
Trigger: TGTGGAGGCCCTGCAGGAGCAGCTGACTTCGGTGGT...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCGATGCGACACTTATTaGGGTTGTCTTCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPRCDTY*GCLQRN
Trigger: ATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACTGCAAGGCAGACTCTaGGAGAGTCTTGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKILQGRL*ESLGLV
Trigger: GACCAGACCAAGACTCTCGCAGAGTCTGCCTTGCAG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGCCACCTTCTTTGGCTaGATACAACATCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRATFFG*IQHLQG
Trigger: GCCTTGCAGATGTTGTATGCAGCCAAAGAAGGTGGC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTTGGTTCTGGAGGAGTaGCTTCATCCAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGLVLEE*LHPACS
Trigger: TGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCATTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAFRRGC*HLALES
Trigger: GCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAA...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCTCTGTCACAGCTCTTaGAGCTGCAGCCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLCHSS*SCSQEI
Trigger: AATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCATCACACTCTCAATaGAGTCAAAGTAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPSHSQ*SQSKRG
Trigger: ACCTCTCTTACTTTGACTGCATTGAGAGTGTGATGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCACCAAGTTCTGGCATaGCATCTGGATGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLHQVLA*HLDGLV
Trigger: AACCAGGCCATCCAGATGGCATGCCAGAACTTGGTG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAACGATGCGGCAGGCATTaGACAAGGCTGACGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKRCGRH*TRLTCA
Trigger: AGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCG...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCAGCGTCCCCGCTGTTaGAAACATAATGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLQRPRC*KHNGGV
Trigger: GACACCACCATTATGTTTGCAACAGCGGGGACGCTG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGTTCTCCCTGTGGTCTaGGAAGGTCTCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLVLPVV*EGLTVL
Trigger: GAGAACAGTGAGACCTTCGCAGACCACAGGGAGAAC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCACGGCTTTGGCTGTTaGCATGGTGATGCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLHGFGC*HGDAFR
Trigger: ACGAAAGGCATCACCATGGCAACAGCCAAAGCCGTG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGTAAAAACTTATACTaGTGCTGGCGGATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHGKNLY*CWRIWA
Trigger: GGCCCAAATCCGCCAGCAGCAGTATAAGTTTTTACC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGACCCTGGGTGAGCCAGTaGTCAAGACATGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRPWVSQ*SRHGRR
Trigger: CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGG...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGGAGGCAAGAAAGCGTaGAAACAGGGGCGGGAATTT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFGGKKA*KQGREF
Trigger: AAATTCCCGCCCCTGTTTGCACGCTTTCTTGCCTCC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGAGGCAAGAAAGCGTaGAAACAGGGGCGGGAATTT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGGKKA*KQGREF
Trigger: AAATTCCCGCCCCTGTTTGCACGCTTTCTTGCCTCC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGGGGTCGGTTGTCGATaGAGCCACTCCACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSGVGCR*SHSTGG
Trigger: GCCGCCCGTGGAGTGGCTGCATCGACAACCGACCCC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGGGGTCGGTTGTCGATaGAGCCACTCCACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTGVGCR*SHSTGG
Trigger: GCCGCCCGTGGAGTGGCTGCATCGACAACCGACCCC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATGCTGGACTCCCCGATaGTCTTCAAGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRCWTPR*SSRPRP
Trigger: TGGACGTGGCCTTGAAGAGCATCGGGGAGTCCAGCA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCCTGGAAAGGCTTCGTaGTTGGAGGTAGCGAATCCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLPGKAS*LEVANP
Trigger: TGGATTCGCTACCTCCAAGCACGAAGCCTTTCCAGG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGAACTTTCCAGAGGCTaGAGCCAACTCTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLELSRG*SQLSTL
Trigger: CAGAGTGGAGAGTTGGCTGCAGCCTCTGGAAAGTTC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGCCTGCTGGACGGCGTaGATGCTTGTGTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIACWTA*MLVLMV
Trigger: GACCATCAACACAAGCATGCACGCCGTCCAGCAGGC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGGCTGCAGCCCCCTTTaGAGCTTCCACCATGCGAGC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKGCSPL*SFHHAS
Trigger: GCTCGCATGGTGGAAGCTGCAAAGGGGGCTGCAGCC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATACCCGGAGGCCTTCTaGAGCTTCTCTCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIYPEAF*SFSQPL
Trigger: CAAAGGCTGAGAGAAGCTGCAGAAGGCCTCCGGGTA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTTGTTGGAAACAGCTaGATTCTGGGAGGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLVGNS*ILGGGD
Trigger: ATCGCCGCCTCCCAGAATGCAGCTGTTTCCAACAAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGATCAGCCACTGCCTTaGAACTCTGGACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLDQPLP*NSGPAA
Trigger: AGCAGCTGGTCCAGAGTTGCAAGGCAGTGGCTGATC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATCATTCTTAAGCGTCTaGACCGTATTCAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGSFLSV*TVFRAE
Trigger: TTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCTCTTCAGAACTGGTaGCCACACACTGTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPLQNW*PHTVSV
Trigger: GACACTGACAGTGTGTGGGCACCAGTTCTGAAGAGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCATTGGTTCCTGTGCCTaGGAACCCTCGGAGCTGATC +
Preference number: 4 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFIGSCA*EPSELI
Trigger: GATCAGCTCCGAGGGTTCCCAGGCACAGGAACCAAT...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCTTCCTTCATCAACTaGGCGGCCTCTGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKASFIN*AASVMA
Trigger: CGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCTTCCTTCATCAACTaGGCGGCCTCTGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRASFIN*AASVMA
Trigger: CGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCATGGCTTCTGCAATaGCGTCCACCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSWLLQ*RPPCPQ
Trigger: TTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGACAAATGTTCCCTTTaGTTCTGGAGGAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGDKCSL*FWRSAF
Trigger: GAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCGTGGCAGACCTCCTCTaGTTCCGCCGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SYGYRHSKAKSTLATKESVADLL*FRRGCC
Trigger: GCAGCAGCCACGGCGGAACCAGAGGAGGTCTGCCAC...GCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCGCATTGGGAGCTCCTaGATCTACAGAGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGRIGSS*IYRERL
Trigger: AAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGGAGATTTTTCGCATTaGGAGCTCCTGGATCTACAG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGGDFSH*ELLDLQ
Trigger: CTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGATTCACCCAGAACCTTaGAGTTTTCCATCACACTCT +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRIHPEP*SFPSHS
Trigger: AGAGTGTGATGGAAAACTCCAAGGTTCTGGGTGAAT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGATTCACCCAGAACCTTaGAGTTTTCCATCACACTCT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPIHPEP*SFPSHS
Trigger: AGAGTGTGATGGAAAACTCCAAGGTTCTGGGTGAAT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGGAGGTCTCCGGTCTTaGCATTCTGTGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCGGLRS*HSVKSL
Trigger: CAGGGATTTCACAGAATGCCAAGACCGGAGACCTCC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCCATCTGGATGGCCTaGTTAGCCCTGGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAIWMA*LALANW
Trigger: CCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGGGTCCACCAAGTTCTaGCATGCCATCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKGSTKF*HAIWMA
Trigger: GGCCATCCAGATGGCATGCCAGAACTTGGTGGACCC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIRLTCA*QQLWRL
Trigger: CAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATGTTGGCGACTTCCTTaGCTGACTGGACGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLCWRLP*LTGRSA
Trigger: GGCACTTCGTCCAGTCAGCCAAGGAAGTCGCCAACA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCGATCAGCTCCCTCTTaGTGTAGCTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCRSAPS*CSCLWG
Trigger: GCCCCACAGACAGCTACACCAAGAGGGAGCTGATCG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATTGATCAAAACCACCTaGGTCTCGGGGTCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKILIKTT*VSGSSE
Trigger: CTCCGACGACCCCGAGACCCAGGTGGTTTTGATCAA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGAGCCCACCTTTCCTTaGGCCACCAGCTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKEPTFP*ATSSLW
Trigger: CCAGAGGGAGCTGGTGGCCCAAGGAAAGGTGGGCTC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCCAGCAGCTGAGCCGTaGAAGCGGCGACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRPAAEP*KRRPAW
Trigger: CCAAGCAGGTCGCCGCTTCCACGGCTCAGCTGCTGG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCAAAAGCTGCCTTCTaGGCTGCACGGACAAGATTG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPKAAF*AARTRL
Trigger: CAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGAATACAAGATGGGTCTaGGTTGTACAAGGAGCTTAC +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPNTRWV*VVQGAY
Trigger: GTAAGCTCCTTGTACAACCCAGACCCATCTTGTATT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCCACAAAATACAAGATaGGTCTGGGTTGTACAAGGA +
Preference number: 4 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRPQNTR*VWVVQG
Trigger: TCCTTGTACAACCCAGACCCATCTTGTATTTTGTGG...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCGCAACTCTGCCCTTTaGACTACGGAGGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTRNSAL*TTEEQN
Trigger: ATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGTGGCCCCGGGTGGCATaGACCACTTCCCCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRWPRVA*TTSPAD
Trigger: GTCTGCTGGGGAAGTGGTCCATGCCACCCGGGGCCA...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTGGGGCTCACAACCTTaGCACATGCCACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKWGSQP*HMPQAG
Trigger: CCCAGCTTGTGGCATGTGCCAAGGTTGTGAGCCCCA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCAGGTCTGATGTGGCTTaGGCCAGAACCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLARSDVA*ARTRAW
Trigger: CCAGGCGCGGGTTCTGGCCCAAGCCACATCAGACCT...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCCACCATGCGAGCAGTaGAGTCAGCTAAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRPPCEQ*SQLRVL
Trigger: CAAAACTCTTAGCTGACTCCACTGCTCGCATGGTGG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCCGCTGCGGCCTGCTTaGCTGCAACCTCCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRPLRPA*LQPPVG
Trigger: ACCGACTGGAGGTTGCAGCCAAGCAGGCCGCAGCGG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTGGTGGCCAGGTTCTTaGCACACTGGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCWWPGS*HTGSAA
Trigger: TGCAGCTGAGCCAGTGTGCCAAGAACCTGGCCACCA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATTCCAGCGTTTCCCCTaGAAGTGGCTTCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLFQRFP*KWLQLA
Trigger: AGCCAGCTGAAGCCACTTCCAGGGGAAACGCTGGAA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGCCCTTCCCTTCCTATaGGAGGGCTCTGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKALPFL*EGSEKG
Trigger: CCCCTTTTCAGAGCCCTCCCATAGGAAGGGAAGGGC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCACTCCTGAGTGTCTCTaGAAGCACGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKITPECL*KHVCPS
Trigger: GGAGGGGCACACGTGCTTCCAGAGACACTCAGGAGT...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGACTCTGAGGCAAGGTaGAAGAACTGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKDSEAR*KNWLPA
Trigger: GGCAGGCAGCCAGTTCTTCCACCTTGCCTCAGAGTC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGACCAGAGCCACTACTaGCACAGTTGTCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHDQSHY*HSCQDL
Trigger: AAGATCTTGACAACTGTGCCAGTAGTGGCTCTGGTC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCCAGAGGCCAGCACTGTaGAGAGATAGGACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIQRPAL*RDRTRA
Trigger: GGCTCTGGTCCTATCTCTCCACAGTGCTGGCCTCTG...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCGAATGAGGTACGATaGACTCTCCAGCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLANEVR*TLQHGL
Trigger: AAGACCATGCTGGAGAGTTCATCGTACCTCATTCGC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGACTGGGCGGCCTCTGTaGTGGCGTCATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKTGRPL*WRHGCV
Trigger: AACACACCCATGACGCCATCACAGAGGCCGCCCAGT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCGTTCAGCGTCACCATaGTGTCATCCACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKRSASP*CHPRLP
Trigger: AGGAAGCCGTGGATGACATCATGGTGACGCTGAACG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCGTCACTGGTCATTTGTaGAGCCAGTCCTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFVTGHL*SQSSQL
Trigger: GAGTTGGGAGGACTGGCTTCACAAATGACCAGTGAC...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCAGGGGCAGTGAGACTTaGGTACAGCCTGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGRGSET*VQPGAT
Trigger: GGTAGCCCCAGGCTGTACTCAAGTCTCACTGCCCCT...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACACAGAGTGATGAGTTaGTTGATGCTCTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGHRVMS*LMLSVT
Trigger: TGTGACAGAGAGCATCAATCAACTCATCACTCTGTG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGGTCTTGGCATTCTGTaGAATCCCTGCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFGLGIL*NPCHRF
Trigger: GAATCGATGGCAGGGATTTCACAGAATGCCAAGACC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAGGCCTTGGCCGTCTTaGGAATGTTCTCCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRRPWPS*ECSPCG
Trigger: ACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTTCAGGTACGTCTTTTaGCTGGAACACCGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRFRYVF*LEHRKL
Trigger: GAGCTTACGGTGTTCCAGTCAAAAGACGTACCTGAA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTTCTCACCTCGTCACTaGCATCGGGGTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIFSPRH*HRGGRM
Trigger: CATCCTTCCACCCCGATGTCAGTGACGAGGTGAGAA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCTGCTGAGGCCGATTTaGCCAGGGCGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGLLRPI*PGRLWQ
Trigger: CTGCCACAAGCGCCCTGGTCAAATCGGCCTCAGCAG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACACGGACAAGATTGTCTaGGGCTCTTTTCACAGCATT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHTDKIV*GSFHSI
Trigger: AATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTTTTCACCCCCTGGGTaGGCCAGTGCTCAAGACATG +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCFSPPG*ASAQDM
Trigger: CATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAAGACGAGCATTCCACTaGCTGTCAACTGGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKRRAFH*LSTGSR
Trigger: ACGGCTCCCAGTTGACAGTCAGTGGAATGCTCGTCT...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTGGTCTTCTTTTGTCTaGGCTTGGCCAGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCWSSFV*AWPAIS
Trigger: TGAGATGGCTGGCCAAGCTCAGACAAAAGAAGACCA...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTGGTCTTCTTTTGTCTaGGCTTGGCCAGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLWSSFV*AWPAIS
Trigger: TGAGATGGCTGGCCAAGCTCAGACAAAAGAAGACCA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTTTCTTTTTCAGGATaGTGTCAATGTAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPVSFSG*CQCSLQ
Trigger: TTGCAGGCTACATTGACATCATCCTGAAAAAGAAAC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATTCGGCTTCTGCATCTaGCCTCATGGCATTGACGAG +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLFGFCI*PHGIDE
Trigger: CTCGTCAATGCCATGAGGTCAGATGCAGAAGCCGAA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCCGTCAGTGGAACTTTaGAACTATAGTGTGGATGGA +
Preference number: 4 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTPSVEL*NYSVDG
Trigger: TCCATCCACACTATAGTTTCAAAGTTCCACTGACGG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGTGTATTTTAAAACCATaGCATGGGCTAGAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPCILKP*HGLESG
Trigger: ACCAGACTCTAGCCCATGTCATGGTTTTAAAATACA...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCCCCCTCAGTACCATCTaGGGACACCGCAGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAPLSTI*GHRSSA
Trigger: GGCACTACTGCGGTGTCCTCAGATGGTACTGAGGGG...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGGAGTAGAGGGGTGTaGGAAGAACCACATGTCAAC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFRSRGV*EEPHVN
Trigger: GTTGACATGTGGTTCTTCTCACACCCCTCTACTCCT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGAGGGTGCGGTGGCGATaGGACACTTATTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKRVRWR*DTYCGC
Trigger: ACAACCGCAATAAGTGTCGCATCGCCACCGCACCCT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAGCTTCAATCAAGGGTaGGGTGGCGATGCGACACTT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKISFNQG*GGDATL
Trigger: AAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGGGCTCAAAATAGCTTaGCAGTTGTGTCACCTTATG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGGLKIA*QLCHLM
Trigger: CATAAGGTGACACAACTGGCAAGCTATTTTGAGCCC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGCTGCATACAACATCTaGAAGGCAGACTCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFAAYNI*KADSAR
Trigger: TCTCGCAGAGTCTGCCTTGCAGATGTTGTATGCAGC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGCTGCATACAACATCTaGAAGGCAGACTCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCAAYNI*KADSAR
Trigger: TCTCGCAGAGTCTGCCTTGCAGATGTTGTATGCAGC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCCACCTTCTTTGGCTaGATACAACATCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLATFFG*IQHLQG
Trigger: GCCTTGCAGATGTTGTATGCAGCCAAAGAAGGTGGC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCTTGCTCATGGCTTCTaGAATGGCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKLAHGF*NGVHHA
Trigger: GGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTTGCTCATGGCTTCTaGAATGGCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLAHGF*NGVHHA
Trigger: GGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTGCCTTCATCCAGCTTaGTCATGGCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFCLHPA*SWLLQW
Trigger: CCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTGGTTCTGGAGGAGTaGCTTCATCCAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLVLEE*LHPACS
Trigger: TGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCTGGTTCCGCCGTGGCTaGTGCCATCTGGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSKAKSTLATKESWSRKGWFRRG*CHLALE
Trigger: TTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCA...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp ACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCCCTGGTCTGGACCTGTaGTGTGCAGTGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGDRARDRGPDRTLYTKSPGLDL*CAVVGK
Trigger: TTTCCCCACCACTGCACAGCACAGGTCCAGACCAGG...GGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCAGCAGCTTGCTGGATaGCATCGAGATATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAQQLAG*HRDILE
Trigger: CTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCAGCTAACAGCAGCTTaGTGGATGCCATCGAGATAT +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGQLTAA*WMPSRY
Trigger: ATATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCCAGGCCCTGGTGGCCTaGCTGGCTGTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAQALVA*LAVWIR
Trigger: TCTGATCCAAACAGCCAGGCAGGCCACCAGGGCCTG...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIHKADV*LATIVA
Trigger: CGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTCTTGGATGAGGCGATaGGGCAGGCATTGCACAAGG +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKISWMRR*GRHCTR
Trigger: CCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAATCTTGGATGAGGCGATaGGGCAGGCATTGCACAAGG +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKSWMRR*GRHCTR
Trigger: CCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGA...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCTGACTGGACGAAGTaGCTCTTGGCTACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRADWTK*LLATGL
Trigger: CAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGGTCCTGCACACGAGTaGGAATCTGGAATCCGATCT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLGPAHE*ESGIRS
Trigger: AGATCGGATTCCAGATTCGCACTCGTGTGCAGGACC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGGTCTCACTGTTCTCTaGATTCAGCGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVGLTVL*IQRPRC
Trigger: ACAGCGGGGACGCTGAATGCAGAGAACAGTGAGACC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGGTCTCACTGTTCTCTaGATTCAGCGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRGLTVL*IQRPRC
Trigger: ACAGCGGGGACGCTGAATGCAGAGAACAGTGAGACC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGTTCTCCCTGTGGTCTaGGAAGGTCTCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLVLPVV*EGLTVL
Trigger: GAGAACAGTGAGACCTTCGCAGACCACAGGGAGAAC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGGCCTCATCCTCCACTaGCTTTACAGTCTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIGLILH*LYSLEE
Trigger: CTCCTCAAGACTGTAAAGGCAGTGGAGGATGAGGCC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGAACACCGTAAGCTCCTaGTTTATGCATTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRENTVSS*FMHSIV
Trigger: CACAATTGAATGCATAAAGCAGGAGCTTACGGTGTT...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACACGGCTTTGGCTGTTaGCATGGTGATGCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLHGFGC*HGDAFR
Trigger: ACGAAAGGCATCACCATGGCAACAGCCAAAGCCGTG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGCTCTTGGCTTCAGTTaGTCTAACTTCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGALGFS*SNFLAA
Trigger: TGCTGCTAAGAAGTTAGAGCAACTGAAGCCAAGAGC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCTCTTGGCTTCAGTTaGTCTAACTTCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHALGFS*SNFLAA
Trigger: TGCTGCTAAGAAGTTAGAGCAACTGAAGCCAAGAGC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTGTGTAGTGTTCGTTaGCTTGAGCAGCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLCSVR*LEQHRS
Trigger: TGACCTGTGCTGCTCAAGGCAACGAACACTACACAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCTGGTTCAGATCAGCTaGTGCCTGGTTCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLVQIS*CLVQFT
Trigger: AGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGCCAGCCATCTCAATaGCAGCATCGAGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGQPSQ*QHRGIH
Trigger: ATGAATTCCTCGATGCTGGCATTGAGATGGCTGGCC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGGACCTGTGATGGGCTaGTGCCAGGGTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKGPVMG*CQGPPS
Trigger: ACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTCC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCATTCTCTGGGTTGGCTaGAGCCCCCTTTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCILWVG*SPLCSF
Trigger: GAAGCTGCAAAGGGGGCTGCAGCCAACCCAGAGAAT...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCTGCGGCCTGCTTGGCTaGAACCTCCAGTCGGTTGAC +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLACGLLG*NLQSVD
Trigger: GTCAACCGACTGGAGGTTGCAGCCAAGCAGGCCGCA...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAACTCACGGTGGGCACTaGGGCTTTGGCAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLATHGGH*GFGRGH
Trigger: GTGTCCTCTGCCAAAGCCGCAGTGCCCACCGTGAGT...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCTTCATGGGCCTTCTaGGAGGCGGTACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGASWAF*EAVRSS
Trigger: GGAGCTGCGTACCGCCTCGCAGAAGGCCCATGAAGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGTTCACATACACATGTaGAGGGTGGATGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRVHIHM*RVDEER
Trigger: CCTTTCCTCATCCACCCTGCACATGTGTATGTGAAC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAATTCTGGGGACTATCTaGCAGGGAGGAAACCAAGGC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLILGTI*QGGNQG
Trigger: GCCTTGGTTTCCTCCCTGGCAGATAGTCCCCAGAAT...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGTCTCCAGCATGGTCTTaGCTGAGACCAGGATTGGTT +
Preference number: 4 (lower is better)
Translates to: AVPSLGMLKETGDRARDRSPAWS*LRPGLV
Trigger: AACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGA...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGAGTCGGACACTGTATaGGAATGTCCAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFESDTV*ECPAST
Trigger: TGTACTGGCTGGACATTCCCATACAGTGTCCGACTC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTGCGAGAGTCTTGGTCTaGTCCAGCACCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPARVLV*SSTVIC
Trigger: GCAGATGACGGTGCTGGACCAGACCAAGACTCTCGC...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTGCTTCCTTCATCAACTaGGCGGCCTCTGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPASFIN*AASVMA
Trigger: CGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGC...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTCATGGCTTCTGCAATaGCGTCCACCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKSWLLQ*RPPCPQ
Trigger: TTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGAGACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAATGGGGCTACCTGGTCTaGACCTGTGCTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KRQVTGLGTGDLIEHCIQWGYLV*TCAVQW
Trigger: CCACTGCACAGCACAGGTCCAGACCAGGTAGCCCCA...TTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTCCATGCCCCAGTTCTTaGCCAGTCTGCCCCATAAGG +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPPCPSS*PVCPIR
Trigger: CCTTATGGGGCAGACTGGCCAAGAACTGGGGCATGG...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTATCGCACTCTTTCTaGCCCGGAGCTTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLSHSF*PGACWV
Trigger: TACCCAACAAGCTCCGGGCCAGAAAGAGTGCGATAA...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTTATCGCACTCTTTCTaGCCCGGAGCTTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLSHSF*PGACWV
Trigger: TACCCAACAAGCTCCGGGCCAGAAAGAGTGCGATAA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRRLTCA*QQLWRL
Trigger: CAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCTGGGTTGGCCGTCTTaGATGAGGCGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGLGWPS*MRRCGR
Trigger: CCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTCTTGGCTACTGGGTTaGCCGTCTTGGATGAGGCGA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKSWLLG*PSWMRR
Trigger: TCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTGTTGGCGACTTCCTTaGCTGACTGGACGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCCWRLP*LTGRSA
Trigger: GGCACTTCGTCCAGTCAGCCAAGGAAGTCGCCAACA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACACGAGTGCGAATCTaGAATCCGATCTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFTRVRI*NPISSG
Trigger: ACCAGAGGAGATCGGATTCCAGATTCGCACTCGTGT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTAGAATGTTCTCCCTGTaGTCTGCGAAGGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCRMFSL*SAKVSL
Trigger: CAGTGAGACCTTCGCAGACCACAGGGAGAACATTCT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTTGATCAAAACCACCTaGGTCTCGGGGTCGTCGGAG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKLIKTT*VSGSSE
Trigger: CTCCGACGACCCCGAGACCCAGGTGGTTTTGATCAA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGGTACGTCTTTTGACTaGAACACCGTAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCGTSFD*NTVSSC
Trigger: GCAGGAGCTTACGGTGTTCCAGTCAAAAGACGTACC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTTCTGCAATGACAGTTaGGTCTTCTGGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGFCNDS*VFWIHP
Trigger: TGGGTGGATCCAGAAGACCCAACTGTCATTGCAGAA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCTCATCCGCTTGTTTTaGTTTTGCTCTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHLIRLF*FCSWLQ
Trigger: CTGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGCGGCAGAGGAGTTGTaGGTAGGACATTGTACCGTG +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIAAEEL*VGHCTV
Trigger: CACGGTACAATGTCCTACCCACAACTCCTCTGCCGC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGAATTTTTCACCCCCTaGGTGAGCCAGTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCEFFTP*VSQCSR
Trigger: TCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCAATACAAGATGGGTCTaGGTTGTACAAGGAGCTTAC +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGNTRWV*VVQGAY
Trigger: GTAAGCTCCTTGTACAACCCAGACCCATCTTGTATT...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAAGGAGCCCACCGCCTTaGATGTGCTTCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLARSPPP*MCFPGP
Trigger: AGGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCT...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTGGTTCAGTTCACTCTaGGCTTCCTGGAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCWFSSL*ASWKGF
Trigger: GAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCA...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGCAGCACCTGTAAAATaGCCCCAAGGCAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVAAPVK*PQGRDP
Trigger: AGGGTCTCTGCCTTGGGGCCATTTTACAGGTGCTGC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGGAAGTGGCTTCAGCTaGCTCTCCACGGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKGSGFS*LSTAAI
Trigger: GATGGCAGCCGTGGAGAGCCAGCTGAAGCCACTTCC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACCTCCTCTTCAGAACTaGTGCCCACACACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIPPLQN*CPHTVS
Trigger: ACTGACAGTGTGTGGGCACCAGTTCTGAAGAGGAGG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCATTTGGTTTGTCTCTaGAGGCTTTTCTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREHLVCL*RLFWYQ
Trigger: TTGATACCAGAAAAGCCTCCAGAGACAAACCAAATG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACATCCAGACAAGGCATaGCCCTTCAACTATCTTATG +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGHPDKA*PFNYLM
Trigger: CATAAGATAGTTGAAGGGCCATGCCTTGTCTGGATG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCCTCTGCAGCCGACCTaGAGGGACTGTGTTGACCGA +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKPLQPT*RDCVDR
Trigger: TCGGTCAACACAGTCCCTCCAGGTCGGCTGCAGAGG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAGCGTGCAGTGCGAATaGGGTACGATGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRSVQCE*GTMNSP
Trigger: TGGAGAGTTCATCGTACCTCATTCGCACTGCACGCT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCACTGGGCGGCCTCTGTaGTGGCGTCATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HSKAKSTLATKESWSRKGTGRPL*WRHGCV
Trigger: AACACACCCATGACGCCATCACAGAGGCCGCCCAGT...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCTGAATGTTCGGCTGTaGTCCAGCCAATTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLNVRL*SSQFRS
Trigger: TGACCTAAATTGGCTGGATCACAGCCGAACATTCAG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCTACTCCTTGTTCTCTaGATGTTCGGCTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLLLVL*MFGCDP
Trigger: TGGATCACAGCCGAACATTCAGAGAACAAGGAGTAG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGGTCTTGGCATTCTGTaGAATCCCTGCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLGLGIL*NPCHRF
Trigger: GAATCGATGGCAGGGATTTCACAGAATGCCAAGACC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGAGGAGACCTTTTCCGTaGCGGCACGGGCGCATTCGA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRRRPFP*RHGRIR
Trigger: TCGAATGCGCCCGTGCCGTCACGGAAAAGGTCTCCT...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATGGCTGTTGCCATGGTaGTGCCTTTCGTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIWLLPW*CLSSSL
Trigger: TAAGGATGACGAAAGGCATCACCATGGCAACAGCCA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGGACATTGTACCGTGTaGCATCACGATCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKGHCTV*HHDHAA
Trigger: GGCTGCATGATCGTGATGTCACACGGTACAATGTCC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGGACATTGTACCGTGTaGCATCACGATCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKGHCTV*HHDHAA
Trigger: GGCTGCATGATCGTGATGTCACACGGTACAATGTCC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGTTATTCAAGGAGTGTaGGACGGCTTTAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIVIQGV*DGFSHL
Trigger: CAGGTGGCTAAAGCCGTCTCACACTCCTTGAATAAC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTCACCGAGTCTTTGGTaGTCCCCAGCAGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGSPSLW*SPAGEA
Trigger: TGCCTCGCCTGCTGGGGATCACCAAAGACTCGGTGA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGTGCTTCCCAGGTCCTaGGCACATTTTTCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKVLPRS*AHFSSV
Trigger: AACGCTGGAAAAATGTGCTCAGGACCTGGGAAGCAC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGTGCTTCCCAGGTCCTaGGCACATTTTTCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRVLPRS*AHFSSV
Trigger: AACGCTGGAAAAATGTGCTCAGGACCTGGGAAGCAC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGGCAAGGTCGAAAGGTaGCATCTTCGGAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRGKVER*HLRRTK
Trigger: TTTGGTCCTCCGAAGATGTCACCTTTCGACCTTGCC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTGGGCTAGAGTCTGGTaGAACAAGATCGGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKWARVW*NKIGQG
Trigger: ACCTTGCCCGATCTTGTTTCACCAGACTCTAGCCCA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGATACCAGGTGATAACTaGGAACCAAACTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRIPGDN*EPNSPK
Trigger: CTTTGGGGAGTTTGGTTCTCAGTTATCACCTGGTAT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAAAGGAGTAGAGGGGTGTaGGAAGAACCACATGTCAAC +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQERSRGV*EEPHVN
Trigger: GTTGACATGTGGTTCTTCTCACACCCCTCTACTCCT...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACTTGCTCACCACTTTTaGCCTGTGTCTGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKILAHHF*PVSGSL
Trigger: CAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAGATCTTTTGCTTTCTaGACTCTGGGGACCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRRSFAF*TLGTAA
Trigger: GGCAGCGGTCCCCAGAGTTCAGAAAGCAAAAGATCT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTCGTGTTTTGTGGGATaGAGAGATGCAGACAAAGTG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGSCFVG*RDADKV
Trigger: CACTTTGTCTGCATCTCTTCATCCCACAAAACACGA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCACCACCGAAGTCAGCTaGTCCTGCAGGGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGTTEVS*SCRAST
Trigger: TGTGGAGGCCCTGCAGGAGCAGCTGACTTCGGTGGT...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACGATGCGACACTTATTaGGGTTGTCTTCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGRCDTY*GCLQRN
Trigger: ATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCCAGGATTGGTTCCTGTaGCTGGGAACCCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGQDWFL*LGTLGA
Trigger: AGCTCCGAGGGTTCCCAGGCACAGGAACCAATCCTG...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGCCACCTTCTTTGGCTaGATACAACATCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIATFFG*IQHLQG
Trigger: GCCTTGCAGATGTTGTATGCAGCCAAAGAAGGTGGC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCGTCATGGGTGTGTTGTaGCTTGGGGTTTCCGCCACC +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGVMGVL*LGVSAT
Trigger: GGTGGCGGAAACCCCAAGGCACAACACACCCATGAC...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp ACTCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAATTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TLTGTGILKPSLHWPLRKFRRGC*HLALES
Trigger: GCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAA...TTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCAGCAGCTTGCTGGATaGCATCGAGATATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFQQLAG*HRDILE
Trigger: CTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCCTCTGTCACAGCTCTTaGAGCTGCAGCCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKILCHSS*SCSQEI
Trigger: AATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAG...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTCTGTCACAGCTCTTaGAGCTGCAGCCAGGAGATT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLCHSS*SCSQEI
Trigger: AATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGGTCCTGCACACGAGTaGGAATCTGGAATCCGATCT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKGPAHE*ESGIRS
Trigger: AGATCGGATTCCAGATTCGCACTCGTGTGCAGGACC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACCGTGGCCCAGGTCCTaGACACGAGTGCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTPWPRS*TRVRIW
Trigger: CCAGATTCGCACTCGTGTGCAGGACCTGGGCCACGG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGTTCTCCCTGTGGTCTaGGAAGGTCTCACTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCVLPVV*EGLTVL
Trigger: GAGAACAGTGAGACCTTCGCAGACCACAGGGAGAAC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAAAGCGGCCAGCTGCTaGTTGAATTCTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRKAASC*LNSGVG
Trigger: ACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCGCTTGTTTTGGTTTTaGTCTTGGCTTCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRRLFWF*SWLQLL
Trigger: GAGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAAAAACTTATACTGCTaGTGGCGGATTTGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRKNLYC*WRIWAS
Trigger: ACTGGCCCAAATCCGCCAGCAGCAGTATAAGTTTTT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGTAAAAACTTATACTaGTGCTGGCGGATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGKNLY*CWRIWA
Trigger: GGCCCAAATCCGCCAGCAGCAGTATAAGTTTTTACC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGACGTCCACATCCTTCTaGCCAGGGAGGCAATTTACG +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKTSTSF*PGRQFT
Trigger: CGTAAATTGCCTCCCTGGGCAGAAGGATGTGGACGT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACTGGTTCAGATCAGCTaGTGCCTGGTTCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLLVQIS*CLVQFT
Trigger: AGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGAACTTTCCAGAGGCTaGAGCCAACTCTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIELSRG*SQLSTL
Trigger: CAGAGTGGAGAGTTGGCTGCAGCCTCTGGAAAGTTC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGGCCAGCCATCTCAATaGCAGCATCGAGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIGQPSQ*QHRGIH
Trigger: ATGAATTCCTCGATGCTGGCATTGAGATGGCTGGCC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGAGATCATCCTGGGCCTaGTGGACGGCGTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKRSSWA*WTACML
Trigger: AAGCATGCACGCCGTCCAGCAGGCCCAGGATGATCT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTCTTTCAAACACTCCTaGTCCCTGGCATTAGATTCT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHSFKHS*SLALDS
Trigger: AGAATCTAATGCCAGGGAGCAGGAGTGTTTGAAAGA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGAAGAACTGGCTGCCTaGCCCTGCCTTGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTEELAA*PCLGPG
Trigger: CCCAGGACCAAGGCAGGGGCAGGCAGCCAGTTCTTC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAACTGTGTTGACCGACTaGAGGGCCAACCAGGAATTG +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVTVLTD*RANQEL
Trigger: CAATTCCTGGTTGGCCCTGCAGTCGGTCAACACAGT...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATCTCCAGCATGGTCTTaGCTGAGACCAGGATTGGTT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKISPAWS*LRPGLV
Trigger: AACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGAGTCGGACACTGTATaGGAATGTCCAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIESDTV*ECPAST
Trigger: TGTACTGGCTGGACATTCCCATACAGTGTCCGACTC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATGCAGCTCTTAGAAAGTaGCCTTTGGGGCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHAALRK*PLGPNF
Trigger: AAAGTTGGGCCCCAAAGGCCACTTTCTAAGAGCTGC...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTGGCCCGGAGCTTGTTaGGTACACAGAGTGATGAGT +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKWPGAC*VHRVMS
Trigger: ACTCATCACTCTGTGTACCCAACAAGCTCCGGGCCA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGGAGGTCTCCGGTCTTaGCATTCTGTGAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCGGLRS*HSVKSL
Trigger: CAGGGATTTCACAGAATGCCAAGACCGGAGACCTCC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTCTGCAATGACAGTTaGGTCTTCTGGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFFCNDS*VFWIHP
Trigger: TGGGTGGATCCAGAAGACCCAACTGTCATTGCAGAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACAATACAAGATGGGTCTaGGTTGTACAAGGAGCTTAC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHNTRWV*VVQGAY
Trigger: GTAAGCTCCTTGTACAACCCAGACCCATCTTGTATT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCGCAACTCTGCCCTTTaGACTACGGAGGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCRNSAL*TTEEQN
Trigger: ATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGTCAACTGGGAGCCGTaGGTTTGTGTGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVVNWEP*VCVDDS
Trigger: AGAGTCATCCACACAAACCCACGGCTCCCAGTTGAC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCAAGCAGCTTCTTGCTaGACTCCCCGATGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKQAASC*TPRCSS
Trigger: TGAAGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTCACTCTGGGCTTCCTaGAAAGGCTTCGTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKSLWAS*KGFVLG
Trigger: TCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCTTTAGTACCAACATaGCAGCTGCATTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPLVPT*QLHWQQ
Trigger: CTGTTGCCAATGCAGCTGCCATGTTGGTACTAAAGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCAATCAGCTGCTCCTaGCACACAGGGGAGCTAATA +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSISCS*HTGELI
Trigger: TATTAGCTCCCCTGTGTGCCAGGAGCAGCTGATTGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCATGATGAGAGCCAGCTaGGCACTCAGGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCMMRAS*ALRSSA
Trigger: AGCTGAAGACCTGAGTGCCCAGCTGGCTCTCATCAT...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTGGTGGCCAGGTTCTTaGCACACTGGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKWWPGS*HTGSAA
Trigger: TGCAGCTGAGCCAGTGTGCCAAGAACCTGGCCACCA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTTCCATGCACTGCCTTaGCTAAAGGTGCAGATTAAG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGFHALP*LKVQIK
Trigger: CTTAATCTGCACCTTTAGCCAAGGCAGTGCATGGAA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAAAAGGCCTTTGCATTTaGTTTGTCTCTGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGKGLCI*FVSGGF
Trigger: AAAGCCTCCAGAGACAAACCAAATGCAAAGGCCTTT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAACAGCTGGCTGGACACTaGCAAAACTTAAACAAGGGC +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEQLAGH*QNLNKG
Trigger: GCCCTTGTTTAAGTTTTGCCAGTGTCCAGCCAGCTG...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTCCTTGATGAGGTTTTaGCCTTGGCATCACTTTGGA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLASLMRF*PWHHFG
Trigger: TCCAAAGTGATGCCAAGGCCAAAACCTCATCAAGGA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCTGTCTCCAAATTTCTTaGGTTGGTAAGTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGCLQIS*VGKSQK
Trigger: CTTCTGAGACTTACCAACCCAAGAAATTTGGAGACA...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCTTTCAACATGGTACTTaGGGATACCTTTGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGFQHGT*GYLWER
Trigger: TCTTTCCCAAAGGTATCCCCAAGTACCATGTTGAAA...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTGGGCACTGCGGCTTTaGCAGACTTTCTTAAATTCT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRWALRL*QTFLNS
Trigger: AGAATTTAAGAAAGTCTGCCAAAGCCGCAGTGCCCA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636159.1
CDS-3UTR TCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCAGCATGGTCTTGGCTaGGACCAGGATTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKQHGLG*DQDWFL
Trigger: CAGGAACCAATCCTGGTCTCAGCCAAGACCATGCTG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCCGTTCAGCGTCACCATaGTGTCATCCACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLARSASP*CHPRLP
Trigger: AGGAAGCCGTGGATGACATCATGGTGACGCTGAACG...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCGTTCAGCGTCACCATaGTGTCATCCACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKRSASP*CHPRLP
Trigger: AGGAAGCCGTGGATGACATCATGGTGACGCTGAACG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATTAGTCATCATTTCCTaGGCTGTCACCGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKILVIIS*AVTAMA
Trigger: AGCCATTGCGGTGACAGCTCAGGAAATGATGACTAA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGGTCTTGGCATTCTGTaGAATCCCTGCCATCGATTC +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRGLGIL*NPCHRF
Trigger: GAATCGATGGCAGGGATTTCACAGAATGCCAAGACC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCCCCATCCAGGGCCTTaGTGGTCTTCACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSPHPGP*WSSPGW
Trigger: CCAACCTGGTGAAGACCATCAAGGCCCTGGATGGGG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATGGCTGTTGCCATGGTaGTGCCTTTCGTCATCCTTA +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRWLLPW*CLSSSL
Trigger: TAAGGATGACGAAAGGCATCACCATGGCAACAGCCA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTACTCTGTTTCTGCAATaGCAGTTGGGTCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCTLFLQ*QLGLLD
Trigger: ATCCAGAAGACCCAACTGTCATTGCAGAAACAGAGT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGACGGACAAGATTGTCTaGGGCTCTTTTCACAGCATT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLTDKIV*GSFHSI
Trigger: AATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTTGCACCCCTCTCTCCTaGGACACGGTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSCTPLS*DTVRHE
Trigger: CTCATGCCTCACCGTGTCTCAGGAGAGAGGGGTGCA...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTGTTTCTGGCTTTTATaGACCATGTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFCFWLL*TMSNSS
Trigger: GCTGGAGTTGGACATGGTTCATAAAAGCCAGAAACA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTCGTCGACTTTGTTCTaGACCCATACCCTAGATGCC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKISSTLF*THTLDA
Trigger: GGCATCTAGGGTATGGGTTCAGAACAAAGTCGACGA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTGCCAGGAGCTTCTTTaGATTCTCCATGTCGATTTC +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLCQELL*ILHVDF
Trigger: GAAATCGACATGGAGAATTCAAAGAAGCTCCTGGCA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCTTGGGGTCTGACTCCTaGGTGTCTCTGGAAGCACGT +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLALGSDS*VSLEAR
Trigger: ACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAA...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATGTTACAGGAGGCCATaGACACATTGTGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLCYRRP*THCDSE
Trigger: CTCAGAGTCACAATGTGTTCATGGCCTCCTGTAACA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCTTCAACTATCTTATaGAATGAGAAACCACCACAC +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPSTIL*NEKPPH
Trigger: GTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGATGGAGCAACAGACTaGGGACATTTTCAACATGGT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLDGATD*GHFQHG
Trigger: ACCATGTTGAAAATGTCCTCAGTCTGTTGCTCCATC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGAAGTCAGCTGCTCCTaGAGGGCCTCCACAGAGATG +
Preference number: 4 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKEVSCS*RASTEM
Trigger: CATCTCTGTGGAGGCCCTGCAGGAGCAGCTGACTTC...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp AAGAGACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGGGTGCGGTGGCGATaGGACACTTATTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: KRQVTGLGTGDLIEHCIQRVRWR*DTYCGC
Trigger: ACAACCGCAATAAGTGTCGCATCGCCACCGCACCCT...TTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCACTTGCTCATGGCTTCTaGAATGGCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLALAHGF*NGVHHA
Trigger: GGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAG...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCAGTAATCCAGTGTTCTaGCCGCTTCCAGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKISNPVF*PLPAKS
Trigger: GGATTTGGCTGGAAGCGGGCAGAACACTGGATTACT...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCCATCACACTCTCAATaGAGTCAAAGTAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRPSHSQ*SQSKRG
Trigger: ACCTCTCTTACTTTGACTGCATTGAGAGTGTGATGG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACAGGCCCTGGTGGCCTaGCTGGCTGTTTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTQALVA*LAVWIR
Trigger: TCTGATCCAAACAGCCAGGCAGGCCACCAGGGCCTG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCATCACCAGGTTGGCAGTaGTGTTGGCGACTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLASPGWQ*CWRLPW
Trigger: CCAAGGAAGTCGCCAACAGCACTGCCAACCTGGTGA...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCCAAGTAGCCAAGGGTaGACTCCGTCCCGAAACGCA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGPSSQG*TPSRNA
Trigger: TGCGTTTCGGGACGGAGTGCACCCTTGGCTACTTGG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGGCCTTCCGCAACTCTaGCCTTTGGACTACGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGGLPQL*PLDYGG
Trigger: TCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCTGTGTAGTGTTCGTTaGCTTGAGCAGCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKLCSVR*LEQHRS
Trigger: TGACCTGTGCTGCTCAAGGCAACGAACACTACACAG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAACTGGTTCAGATCAGCTaGTGCCTGGTTCAGTTCACT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKLVQIS*CLVQFT
Trigger: AGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAG...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATCTCCAGAAGTAGGCTaGACAGCTTTCAGCAAGTCT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKISPEVG*TAFSKS
Trigger: AGACTTGCTGAAAGCTGTGCAGCCTACTTCTGGAGA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATACCAACATGGCAGCTaGATTGGCAACAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVYQHGS*IGNSFG
Trigger: GCCAAAGCTGTTGCCAATGCAGCTGCCATGTTGGTA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACCTCGGCTGGCAAACTaGCGCACATGCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTPRLAN*RTCCRR
Trigger: TCTCCTGCAGCATGTGCGGCAGTTTGCCAGCCGAGG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACACACATACTCTCACTTaGTTTTCCTTTACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHTHTLT*FSFTAS
Trigger: AGACGCTGTAAAGGAAAAGCAAGTGAGAGTATGTGT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGATTGAGGAACCTGCCTaGACAGATGGCCAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRIEEPA*TDGQGH
Trigger: GTGGCCCTGGCCATCTGTGCAGGCAGGTTCCTCAAT...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCAGAGACCATGGCTTaGTCACCACTTTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRAETMA*SPLLTC
Trigger: ACAGGTCAAAAGTGGTGAGCAAGCCATGGTCTCTGC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATCTCCAGCATGGTCTTaGCTGAGACCAGGATTGGTT +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRSPAWS*LRPGLV
Trigger: AACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGCGAGAGTCTTGGTCTaGTCCAGCACCGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRARVLV*SSTVIC
Trigger: GCAGATGACGGTGCTGGACCAGACCAAGACTCTCGC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGGGTGTGTTGTGCCTTaGGGTTTCCGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKGCVVP*GFRHLL
Trigger: AAGAAGGTGGCGGAAACCCCAAGGCACAACACACCC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTCCAGCCCCACTTCACTaGCAGCTTCGTTCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPPAPLH*QLRSAS
Trigger: TGACGCTGAACGAAGCTGCCAGTGAAGTGGGGCTGG...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTCATCCAGCTTGCTCATaGCTTCTGCAATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPHPACS*LLQWRP
Trigger: TGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATG...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCGACAAATGTTCCCTTTaGTTCTGGAGGAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFDKCSL*FWRSAF
Trigger: GAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTC...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGGTGCCCATAGTCACTaGTCATTTGTGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCGAHSH*SFVKPV
Trigger: GACTGGCTTCACAAATGACCAGTGACTATGGGCACC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGGTGCCCATAGTCACTaGTCATTTGTGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKGAHSH*SFVKPV
Trigger: GACTGGCTTCACAAATGACCAGTGACTATGGGCACC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCCTGGGCTCTGGTTACTaGGCTGGGGTCTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HSKAKSTLATKESWSRKGLGSGY*AGVFQS
Trigger: ACTCTGGAAGACCCCAGCCCAGTAACCAGAGCCCAG...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATAAGCCAAGTCTACACTaGCCACTAAGGAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHKPSLH*PLRKAG
Trigger: ACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTT...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTTTAGCCCTGGCAAACTaGATGGGGTCCACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSLALAN*MGSTRP
Trigger: GGGCCTGGTGGACCCCATCCAGTTTGCCAGGGCTAA...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGCCATCTGGATGGCCTaGTTAGCCCTGGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRAIWMA*LALANW
Trigger: CCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTCTTGGCTACTGGGTTaGCCGTCTTGGATGAGGCGA +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKSWLLG*PSWMRR
Trigger: TCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGAATCCGATCTCCTCTaGTTCCGCCGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSESDLL*FRRGCC
Trigger: GCAGCAGCCACGGCGGAACCAGAGGAGATCGGATTC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAAGAATGTTCTCCCTGTaGTCTGCGAAGGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVRMFSL*SAKVSL
Trigger: CAGTGAGACCTTCGCAGACCACAGGGAGAACATTCT...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGCAGCCCCCTTGAGCTaGTACATGGAAGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTAAPLS*YMEGSS
Trigger: GGACGACCCTTCCATGTACCAGCTCAAGGGGGCTGC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTCATCCGCTTGTTTTaGTTTTGCTCTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLIRLF*FCSWLQ
Trigger: CTGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCAGCATTGGCAGGGATaGAGCCCACCTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRQHWQG*SPPFLG
Trigger: CCCAAGGAAAGGTGGGCTCCATCCCTGCCAATGCTG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAATGGCCTCTGAATCCTaGTCGGCCTTCACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAMASES*SAFTLQ
Trigger: CTGCAAGGTGAAGGCCGACCAGGATTCAGAGGCCAT...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCCTGTAGCCGCCTCATaGCCTCTGAATCCTGGTCGG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSPVAAS*PLNPGR
Trigger: CCGACCAGGATTCAGAGGCCATGAGGCGGCTACAGG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTTCCCTCAGCTCGGTaGGTAAAAACTTATACTGCT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLPSAR*VKTYTA
Trigger: AGCAGTATAAGTTTTTACCCACCGAGCTGAGGGAAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCCACAAAATACAAGATaGGTCTGGGTTGTACAAGGA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAPQNTR*VWVVQG
Trigger: TCCTTGTACAACCCAGACCCATCTTGTATTTTGTGG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACGCAACTCTGCCCTTTaGACTACGGAGGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLRNSAL*TTEEQN
Trigger: ATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAACTCCACGGGCGGCCTaGGCCAGTGTTTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTTPRAA*ASVFRA
Trigger: AGCTCTGAAAACACTGGCCCAGGCCGCCCGTGGAGT...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTACTCCACGGGCGGCCTaGGCCAGTGTTTTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSTPRAA*ASVFRA
Trigger: AGCTCTGAAAACACTGGCCCAGGCCGCCCGTGGAGT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGGACCACAAGCTTCATaGGCCTTCTGCGAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGGPQAS*AFCEAV
Trigger: TACCGCCTCGCAGAAGGCCCATGAAGCTTGTGGTCC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCACAGAAACCAGCGTaGGACCTAAAGATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAQKPA*DLKMSH
Trigger: GTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTACTTTCCCCCGTCAGTaGAACTTTGAAACTATAGTG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLATFPRQ*NFETIV
Trigger: CACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGTGCCTGCCCCTGCCTTaGTCCTGGGTTTTCAGGATG +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRCLPLP*SWVFRM
Trigger: CATCCTGAAAACCCAGGACCAAGGCAGGGGCAGGCA...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAAAGGCCTTTGCATTTaGTTTGTCTCTGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRKGLCI*FVSGGF
Trigger: AAAGCCTCCAGAGACAAACCAAATGCAAAGGCCTTT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGTCTATGCTCCAGACCTaGGGCCGTTTTTACTCTGAC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKSMLQT*GRFYSD
Trigger: GTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGA...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATTCAGGTTCCCCTTTTaGCCATCGGGAACAGCAATT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIFRFPF*PSGTAI
Trigger: AATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCAGGGCCACAGCTGGCTaGACACTGGCAAAACTTAAA +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKIRATAG*TLAKLK
Trigger: TTTAAGTTTTGCCAGTGTCCAGCCAGCTGTGGCCCT...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAATGAGGTTTTGGCCTTaGCATCACTTTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKMRFWP*HHFGGG
Trigger: CCCACCTCCAAAGTGATGCCAAGGCCAAAACCTCAT...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATTGCTTTCTGAACTCTaGGGACCGCTGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVLLSEL*GPLPFS
Trigger: GCTAAAAGGCAGCGGTCCCCAGAGTTCAGAAAGCAA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAACTTGGGGATACCTTTaGGAAAGATGCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRTWGYL*ERCLPQ
Trigger: CTGGGGAAGGCATCTTTCCCAAAGGTATCCCCAAGT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTCCCGGATGCACCGGTTaGTGCCATCGATGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPPGCTG*CHRWSN
Trigger: ATTACTCCATCGATGGCATCAACCGGTGCATCCGGG...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCAGCATGGTCTTGGCTaGGACCAGGATTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGQHGLG*DQDWFL
Trigger: CAGGAACCAATCCTGGTCTCAGCCAAGACCATGCTG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGTCACTGGTCATTTGTaGAGCCAGTCCTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKVTGHL*SQSSQL
Trigger: GAGTTGGGAGGACTGGCTTCACAAATGACCAGTGAC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCACCCCATAAGGGGCAGTaGGACTTGAGTACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKAPHKGQ*DLSTAW
Trigger: CCAGGCTGTACTCAAGTCTCACTGCCCCTTATGGGG...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCTTCCGCCGCCTGGATaGGCTCTGTCACAGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKLPPPG*ALSQRR
Trigger: CCGGCGCTGTGACAGAGCTCATCCAGGCGGCGGAAG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTAGAAATCAGCCCCTGTaGCCACTGTCCGTCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RVFPDKSICREATGSSFLRNQPL*PLSVVC
Trigger: GCAGACGACGGACAGTGGTCACAGGGGCTGATTTCT...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAACGGACAAGATTGTCTaGGGCTCTTTTCACAGCATT +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKITDKIV*GSFHSI
Trigger: AATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCACCATTTTCCTAGATaGTGTGGACAGTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCHHFPR*CGQSHL
Trigger: TAAGTGAGACTGTCCACATCATCTAGGAAAATGGTG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGACAGCTCCTCTCTGCTTaGTATATTCTTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRQLLSA*YILWAG
Trigger: TCCTGCCCAAAGAATATATCAAGCAGAGAGGAGCTG...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCCCCAAAATCCAGTGTaGAGCTCTTGGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGPQNPV*SSWVRL
Trigger: CAGCCTCACCCAAGAGCTTCACACTGGATTTTGGGG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGTTGGGGTCTGACTCCTaGGTGTCTCTGGAAGCACGT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRLGSDS*VSLEAR
Trigger: ACGTGCTTCCAGAGACACTCAGGAGTCAGACCCCAA...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGTTCACACTCCCAAATaGACTCATGCCTGTGTTATT +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLVHTPK*THACVI
Trigger: AATAACACAGGCATGAGTTCATTTGGGAGTGTGAAC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACAAGGGCTGTTCATTaGACTAAATATGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFTRAVH*TKYDLS
Trigger: GCTGAGGTCATATTTAGTTCAATGAACAGCCCTTGT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGCGGCCAGCGAGGCCTaGTCGATGTCCCGGATGCAC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLAASEA*SMSRMH
Trigger: GTGCATCCGGGACATCGAGCAGGCCTCGCTGGCCGC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTCTGCAAGGCAGACTCTaGGAGAGTCTTGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPLQGRL*ESLGLV
Trigger: GACCAGACCAAGACTCTCGCAGAGTCTGCCTTGCAG...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp ACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCGCCACCTTCTTTGGCTaGATACAACATCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: TGDRARDRGPDRTLYTKSATFFG*IQHLQG
Trigger: GCCTTGCAGATGTTGTATGCAGCCAAAGAAGGTGGC...GGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTCTTGCTCATGGCTTCTaGAATGGCGTCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPLAHGF*NGVHHA
Trigger: GGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAG...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTAGTTCTTGGCCAGTCTaGCCCATAAGGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPSSWPV*PIRGSE
Trigger: CTCACTGCCCCTTATGGGGCAGACTGGCCAAGAACT...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTCTGTCTGAAAGCCCATaGCCCAGTTCTTGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPLSESP*PSSWPV
Trigger: GACTGGCCAAGAACTGGGGCATGGGCTTTCAGACAG...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGAACACCGTAAGCTCCTaGTTTATGCATTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGNTVSS*FMHSIV
Trigger: CACAATTGAATGCATAAAGCAGGAGCTTACGGTGTT...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGAACACCGTAAGCTCCTaGTTTATGCATTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRNTVSS*FMHSIV
Trigger: CACAATTGAATGCATAAAGCAGGAGCTTACGGTGTT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCCACTGTCCGTCGTCTaGAGCATTGGCAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSPLSVV*SIGRDG
Trigger: TCCATCCCTGCCAATGCTGCAGACGACGGACAGTGG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACCACTGTCCGTCGTCTaGAGCATTGGCAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTPLSVV*SIGRDG
Trigger: TCCATCCCTGCCAATGCTGCAGACGACGGACAGTGG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTCTTTGTTGACGCTCTaGATCTCCAGGTGCAATCAG +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCSLLTL*ISRCNQ
Trigger: CTGATTGCACCTGGAGATGCAGAGCGTCAACAAAGA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATCTTTGTTGACGCTCTaGATCTCCAGGTGCAATCAG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRSLLTL*ISRCNQ
Trigger: CTGATTGCACCTGGAGATGCAGAGCGTCAACAAAGA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCCACAAGCAGCTTCTTaGTGGACTCCCCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRPQAAS*WTPRCS
Trigger: AGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGAGCGCCACTGAGCCGTaGTCTGCCTTCCCGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKSATEP*SAFPVR
Trigger: CCGGACCGGGAAGGCAGAGCACGGCTCAGTGGCGCT...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGTTCACATACACATGTaGAGGGTGGATGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRVHIHM*RVDEER
Trigger: CCTTTCCTCATCCACCCTGCACATGTGTATGTGAAC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTCCCAAATGAACTCATaGCTGTGTTATTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHSQMNS*LCYFPL
Trigger: CAAAGGAAAATAACACAGGCATGAGTTCATTTGGGA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTACAGACCAGGTGGGTaGGTCTTTGGGGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGYRPGG*VFGVDG
Trigger: GCCATCAACCCCAAAGACCCACCCACCTGGTCTGTA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGAGGTGTCCGATTTCCTaGACCACCGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKRCPIS*TTEVSC
Trigger: GCAGCTGACTTCGGTGGTCCAGGAAATCGGACACCT...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTACTCTGCGAGAGTCTTaGTCTGGTCCAGCACCGTCA +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPTLRES*SGPAPS
Trigger: TGACGGTGCTGGACCAGACCAAGACTCTCGCAGAGT...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCGGGTGTGTTGTGCCTTaGGGTTTCCGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: SYGYRHSKAKSTLATKESGCVVP*GFRHLL
Trigger: AAGAAGGTGGCGGAAACCCCAAGGCACAACACACCC...GCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGCTTCCTTCATCAACTaGGCGGCCTCTGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTASFIN*AASVMA
Trigger: CGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTCATGGCTTCTGCAATaGCGTCCACCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: SYGYRHSKAKSTLATKESSWLLQ*RPPCPQ
Trigger: TTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGA...GCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGACAAATGTTCCCTTTaGTTCTGGAGGAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKDKCSL*FWRSAF
Trigger: GAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCGGAACGTCTCGAACATaGTTTGCGCTCAATAAACAG +
Preference number: 4 (lower is better)
Translates to: GLWGPTLATVRLLRVQAFGTSRT*FALNKQ
Trigger: CTGTTTATTGAGCGCAAACCATGTTCGAGACGTTCC...GAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGGAGATTTTTCGCATTaGGAGCTCCTGGATCTACAG +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKGDFSH*ELLDLQ
Trigger: CTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTACCAAGTATGCAGCCTaGGCTGCAGCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSTKYAA*AAASVS
Trigger: GCTGACAGAGGCTGCAGCCCAGGCTGCATACTTGGT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACCCTGGTGGCCTGCCTaGCTGTTTGGATCAGAGATG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTPWWPA*LFGSEM
Trigger: CATCTCTGATCCAAACAGCCAGGCAGGCCACCAGGG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTGCTGCTTGAATTCTaGGGTTGGTTTCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLLLEF*GWFLKN
Trigger: ATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACAATCGTTCAGTTTTCTaGGCCACAAAATACAAGATG +
Preference number: 4 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHNRSVF*ATKYKM
Trigger: CATCTTGTATTTTGTGGCCCAGAAAACTGAACGATT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGCAGAATCCCCACCCTaGACGCTAAGGAGACGAGCA +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSAESPP*TLRRRA
Trigger: TGCTCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAAGATCAGCTGCTGCCTaGTTCAGTTCACTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLARSAAA*FSSLWA
Trigger: AGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCT...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATTCACCACGTTGCAGTaGCGCACACAAATCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEFTTLQ*RTQIFK
Trigger: CTTAAAGATTTGTGTGCGCCACTGCAACGTGGTGAA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTCTGCTCTCCCTCGGTaGTTTGTACTGAATAGTAGC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCSALPR*FVLNSS
Trigger: GCTACTATTCAGTACAAACCACCGAGGGAGAGCAGA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCTAGATGCCATATCCTaGCCGAGAGGTGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSLDAIS*PRGGSE
Trigger: CTCGCTGCCACCTCTCGGCCAGGATATGGCATCTAG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTGGACCACAAGCTTCATaGGCCTTCTGCGAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: RVFPDKSICREATGSSFLGPQAS*AFCEAV
Trigger: TACCGCCTCGCAGAAGGCCCATGAAGCTTGTGGTCC...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCCCACGGCTGCCATCTTaGCATCCTGCAGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAPRLPS*HPAVHS
Trigger: AGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGG...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGACTTTCCCCCGTCAGTaGAACTTTGAAACTATAGTG +
Preference number: 4 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLTFPRQ*NFETIV
Trigger: CACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGAAGCAGCCAGCCCCTTaGTCAACAGAGGGTACCTTT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKKQPAP*STEGTF
Trigger: AAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
3UTR CAA 72 bp ACTGGAGTAGGAAGTGATAAGATGGCAGTCCCAAGCTaGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: TGVGSDKMAVPS*GMLKETGDRAR
Trigger: CCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGCCATCTTATCACTTCCTACTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTGACAAACTCAGGGTTTaGGGCGAACGCTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPDKLRV*GERCQV
Trigger: AACCTGACAGCGTTCGCCTCAAACCCTGAGTTTGTC...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGAGCGTGCAGTGCGAATaGGGTACGATGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKSVQCE*GTMNSP
Trigger: TGGAGAGTTCATCGTACCTCATTCGCACTGCACGCT...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCACGTTCAGCGTCACCATaGTGTCATCCACGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKARSASP*CHPRLP
Trigger: AGGAAGCCGTGGATGACATCATGGTGACGCTGAACG...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACCATCGAGATATTCTTaGGGTTCCCTATCACTTGGA +
Preference number: 4 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVPSRYS*GSLSLG
Trigger: TCCAAGTGATAGGGAACCTCAAGAATATCTCGATGG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAGCCGTCAACATATCTaGCACGGCTTTCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSSRQHI*HGFPAQ
Trigger: CTGAGCCGGAAAGCCGTGTCAGATATGTTGACGGCT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGCTTCCGTCTTCTCCTaGGAGGAAGAAGAATATTCT +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCASVFS*EEEEYS
Trigger: AGAATATTCTTCTTCCTCTCAGGAGAAGACGGAAGC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTTTTTCACCCCCTGGGTaGGCCAGTGCTCAAGACATG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSFSPPG*ASAQDM
Trigger: CATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAA...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACTAAAGATGAGTCACTaGGGAAGCTCTTTATTCCAG +
Preference number: 4 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLLKMSH*GSSLFQ
Trigger: CTGGAATAAAGAGCTTCCTCAGTGACTCATCTTTAG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTAAGAGGGGAAAAATATaGAATTCTGGAAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAKRGKI*NSGSVT
Trigger: TGTCACACTTCCAGAATTTCATATTTTTCCCCTCTT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCCGTCAGTGGAACTTTaGAACTATAGTGTGGATGGA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKPSVEL*NYSVDG
Trigger: TCCATCCACACTATAGTTTCAAAGTTCCACTGACGG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGGCAAGGTCGAAAGGTaGCATCTTCGGAGGACCAAA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRGKVER*HLRRTK
Trigger: TTTGGTCCTCCGAAGATGTCACCTTTCGACCTTGCC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCATACCAGGTGATAACTaGGAACCAAACTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCIPGDN*EPNSPK
Trigger: CTTTGGGGAGTTTGGTTCTCAGTTATCACCTGGTAT...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCCTTCAACTATCTTATaGAATGAGAAACCACCACAC +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCPSTIL*NEKPPH
Trigger: GTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTATCTAAAGACTCCTaGAAGGCCCAAGTAAAATCT +
Preference number: 4 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLSKDS*KAQVKS
Trigger: AGATTTTACTTGGGCCTTTCAGGAGTCTTTAGATAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAGCTGATAGTCTGTGCTaGGATCTTAAGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAADSLC*DLKASI
Trigger: GATGCTGGCCTTAAGATCTCAGCACAGACTATCAGC...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATTTCCTCCAGGAATCTaGGAATGGAACATGCTGATA +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEFPPGI*EWNMLI
Trigger: TATCAGCATGTTCCATTCTCAGATTCCTGGAGGAAA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATCGATGCGACACTTATTaGGGTTGTCTTCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHRCDTY*GCLQRN
Trigger: ATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCG...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAAGGGTGCGGTGGCGATaGGACACTTATTGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTRVRWR*DTYCGC
Trigger: ACAACCGCAATAAGTGTCGCATCGCCACCGCACCCT...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCAGCTTCAATCAAGGGTaGGGTGGCGATGCGACACTT +
Preference number: 4 (lower is better)
Translates to: SYGYRHSKAKSTLATKESSFNQG*GGDATL
Trigger: AAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCT...GCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCAGATGGCCAGAGAGCGTaGAGTGCGAATGAGGTACGA +
Preference number: 4 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKADGQRA*SANEVR
Trigger: TCGTACCTCATTCGCACTGCACGCTCTCTGGCCATC...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCTGCCTTCATCCAGCTTaGTCATGGCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGCLHPA*SWLLQW
Trigger: CCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCA...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAACCATCACACTCTCAATaGAGTCAAAGTAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEPSHSQ*SQSKRG
Trigger: ACCTCTCTTACTTTGACTGCATTGAGAGTGTGATGG...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCACCAAGTTCTGGCATaGCATCTGGATGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRHQVLA*HLDGLV
Trigger: AACCAGGCCATCCAGATGGCATGCCAGAACTTGGTG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGGTCCTGCACACGAGTaGGAATCTGGAATCCGATCT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRGPAHE*ESGIRS
Trigger: AGATCGGATTCCAGATTCGCACTCGTGTGCAGGACC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCAGCGTCCCCGCTGTTaGAAACATAATGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRQRPRC*KHNGGV
Trigger: GACACCACCATTATGTTTGCAACAGCGGGGACGCTG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGGTCTCACTGTTCTCTaGATTCAGCGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSGLTVL*IQRPRC
Trigger: ACAGCGGGGACGCTGAATGCAGAGAACAGTGAGACC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCTCTTGGCTTCAGTTaGTCTAACTTCTTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CDITIMQPVPTGQRCENKALGFS*SNFLAA
Trigger: TGCTGCTAAGAAGTTAGAGCAACTGAAGCCAAGAGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCGCTTGTTTTGGTTTTaGTCTTGGCTTCAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCRLFWF*SWLQLL
Trigger: GAGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCGGTTTCCAGCTAAGTaGCCAGCCTCTCAGGAACAC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSRFPAK*PASQEH
Trigger: GTGTTCCTGAGAGGCTGGGCACTTAGCTGGAAACCG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGATGTCAATGTAGCCTaGAATCAGCTGGGATATCTG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRDVNVA*NQLGYL
Trigger: CAGATATCCCAGCTGATTGCAGGCTACATTGACATC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGTGGCTTGTCCGATGCTaGCAGCAGCAGTCAAAACTG +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRWLVRC*QQQSKL
Trigger: CAGTTTTGACTGCTGCTGGCAGCATCGGACAAGCCA...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCACTGGCTTGTCCGATaGTGCCAGCAGCAGTCAAAA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRHWLVR*CQQQSK
Trigger: TTTTGACTGCTGCTGGCAGCATCGGACAAGCCAGTG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTTGCAGCTTCCACCATaGGAGCAGTGGAGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGLQLPP*EQWSQL
Trigger: TAGCTGACTCCACTGCTCGCATGGTGGAAGCTGCAA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATCTTTCAAACACTCCTaGTCCCTGGCATTAGATTCT +
Preference number: 4 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQESFKHS*SLALDS
Trigger: AGAATCTAATGCCAGGGAGCAGGAGTGTTTGAAAGA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTCCCAAATGAACTCATaGCTGTGTTATTTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGSQMNS*LCYFPL
Trigger: CAAAGGAAAATAACACAGGCATGAGTTCATTTGGGA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCTGGGCAGCTGCCTCTaGAGCCGACCTGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKLGSCL*SRPGGT
Trigger: AGTCCCTCCAGGTCGGCTGCAGAGGCAGCTGCCCAG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAATGTGGGATGAAGAGATaGAGACAAAGTGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKCGMKR*RQSDSG
Trigger: ACCTGAGTCACTTTGTCTGCATCTCTTCATCCCACA...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGCAATCAAGGGTGCGGTaGCGATGCGACACTTATTGC +
Preference number: 4 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKQSRVR*RCDTYC
Trigger: GCAATAAGTGTCGCATCGCCACCGCACCCTTGATTG...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCATGAACTCTCCAGCATaGTCTTGGCTGAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAMNSPA*SWLRPG
Trigger: TCCTGGTCTCAGCCAAGACCATGCTGGAGAGTTCAT...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ACTCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAATACAGACCAGGTGGGTaGGTCTTTGGGGTTGATGGC +
Preference number: 4 (lower is better)
Translates to: TLTGTGILKPSLHWPLRKYRPGG*VFGVDG
Trigger: GCCATCAACCCCAAAGACCCACCCACCTGGTCTGTA...TTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCGAGTCGGACACTGTATaGGAATGTCCAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGESDTV*ECPAST
Trigger: TGTACTGGCTGGACATTCCCATACAGTGTCCGACTC...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGGGTGTGTTGTGCCTTaGGGTTTCCGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSGCVVP*GFRHLL
Trigger: AAGAAGGTGGCGGAAACCCCAAGGCACAACACACCC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAATCTGTGATGGCGTCATaGGTGTGTTGTGCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TLTGTGILKPSLHWPLRKSVMAS*VCCALG
Trigger: CCCCAAGGCACAACACACCCATGACGCCATCACAGA...TTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATCATGGCTTCTGCAATaGCGTCCACCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTSWLLQ*RPPCPQ
Trigger: TTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCTGTTCCCTTTGGTTCTaGAGGAGTGCCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGCSLWF*RSAFIQ
Trigger: CTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACA...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAAATAGGGGTCTTAAGGTaGCAGACCTCCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKIGVLR*QTSSGS
Trigger: GGAACCAGAGGAGGTCTGCCACCTTAAGACCCCTAT...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTGGTGGGGAAATAAACTaGGCTCTGGTTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HTDIDATKLLGATHDLCPGGEIN*ALVTGL
Trigger: CAGCCCAGTAACCAGAGCCCAGTTTATTTCCCCACC...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCTGTGCTGTGCAGTGGTaGGGAAATAAACTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGCAVQW*GNKLGS
Trigger: AGAGCCCAGTTTATTTCCCCACCACTGCACAGCACA...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCACCTGTGCTGTGCAGTaGTGGGGAAATAAACTGGGC +
Preference number: 4 (lower is better)
Translates to: HSKAKSTLATKESWSRKGTCAVQ*WGNKLG
Trigger: GCCCAGTTTATTTCCCCACCACTGCACAGCACAGGT...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAAGGTTCCCCCAAGCCCTaGACTCCTTCTATGTGTTCA +
Preference number: 4 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKGSPKP*TPSMCS
Trigger: TGAACACATAGAAGGAGTCCAGGGCTTGGGGGAACC...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTTTCTGGCATGCCATCTaGATGGCCTGGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSFWHAI*MAWLAL
Trigger: CAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAA...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCGCCGGCGACTCGCTTaGAGAAAGCGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKRRRLA*RKRPAA
Trigger: AGCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTCATCCGCTTGTTTTaGTTTTGCTCTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLIRLF*FCSWLQ
Trigger: CTGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCCAGCAGCTGAGCCGTaGAAGCGGCGACCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKPAAEP*KRRPAW
Trigger: CCAAGCAGGTCGCCGCTTCCACGGCTCAGCTGCTGG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACCACAAAATACAAGATaGGTCTGGGTTGTACAAGGA +
Preference number: 4 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIPQNTR*VWVVQG
Trigger: TCCTTGTACAACCCAGACCCATCTTGTATTTTGTGG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTAATCGTTCAGTTTTCTaGGCCACAAAATACAAGATG +
Preference number: 4 (lower is better)
Translates to: EGGPESPSRSPHGFVFLANRSVF*ATKYKM
Trigger: CATCTTGTATTTTGTGGCCCAGAAAACTGAACGATT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCAGTGTTTTCAGAGCTTaGGCCGTCTCTCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGSVFRA*AVSLAA
Trigger: GGCTGCTAGAGAGACGGCCCAAGCTCTGAAAACACT...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCAAGCAGCTTCTTGCTaGACTCCCCGATGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRQAASC*TPRCSS
Trigger: TGAAGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCATGGTTCAGTTCACTCTaGGCTTCCTGGAAAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAWFSSL*ASWKGF
Trigger: GAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCA...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGCCAACTCTCCACTCTaGCCCCGGGTGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLANSPL*PRVAWT
Trigger: GGTCCATGCCACCCGGGGCCAGAGTGGAGAGTTGGC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGCTTGGCAACAATTGTaGCGGCTGACAGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTAWQQL*RLTGPV
Trigger: CACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATTCCAGCGTTTCCCCTaGAAGTGGCTTCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTFQRFP*KWLQLA
Trigger: AGCCAGCTGAAGCCACTTCCAGGGGAAACGCTGGAA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGACATCCAGACAAGGCATaGCCCTTCAACTATCTTATG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRHPDKA*PFNYLM
Trigger: CATAAGATAGTTGAAGGGCCATGCCTTGTCTGGATG...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGGGAACAGCAATTTCTaGCACAAAAATCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRGNSNF*HKNQPK
Trigger: CTTGGGCTGATTTTTGTGCCAGAAATTGCTGTTCCC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAGCCTTGGCATCACTTTaGAGGTGGGGTTTACTCTCT +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAALASL*RWGLLS
Trigger: AGAGAGTAAACCCCACCTCCAAAGTGATGCCAAGGC...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCGAATGAGGTACGATaGACTCTCCAGCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGANEVR*TLQHGL
Trigger: AAGACCATGCTGGAGAGTTCATCGTACCTCATTCGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp AAGAGACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAATTAGTCATCATTTCCTaGGCTGTCACCGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KRQVTGLGTGDLIEHCIQLVIIS*AVTAMA
Trigger: AGCCATTGCGGTGACAGCTCAGGAAATGATGACTAA...TTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGTCACTGGTCATTTGTaGAGCCAGTCCTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTVTGHL*SQSSQL
Trigger: GAGTTGGGAGGACTGGCTTCACAAATGACCAGTGAC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCACCCCATTAGAAGTATaGGAGATGGCAGCTCTTAGA +
Preference number: 4 (lower is better)
Translates to: TGDRARDRGPDRTLYTKSTPLEV*EMAALR
Trigger: TCTAAGAGCTGCCATCTCTCATACTTCTAATGGGGT...GGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCTTCAGGTACGTCTTTTaGCTGGAACACCGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLAFRYVF*LEHRKL
Trigger: GAGCTTACGGTGTTCCAGTCAAAAGACGTACCTGAA...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGTTGGTAACAGTCCATaGAACGTGCACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTVGNSP*NVHPSL
Trigger: GAGAGAGGGGTGCACGTTTCATGGACTGTTACCAAC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAAAGAGCGTATTTCCCTaGAGATATCCCAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKKSVFP*RYPKAC
Trigger: ACATGCTTTGGGATATCTTCAGGGAAATACGCTCTT...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAACGATGCGACACTTATTaGGGTTGTCTTCAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: PIRACDHSEGTETSVGPKRCDTY*GCLQRN
Trigger: ATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCG...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTGGGCTCAAAATAGCTTaGCAGTTGTGTCACCTTATG +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPGLKIA*QLCHLM
Trigger: CATAAGGTGACACAACTGGCAAGCTATTTTGAGCCC...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCGCTGCATACAACATCTaGAAGGCAGACTCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: HSKAKSTLATKESWSRKGAAYNI*KADSAR
Trigger: TCTCGCAGAGTCTGCCTTGCAGATGTTGTATGCAGC...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAATTGGTTCTGGAGGAGTaGCTTCATCCAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKLVLEE*LHPACS
Trigger: TGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAA...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGTTGGTTCTGGAGGAGTaGCTTCATCCAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRLVLEE*LHPACS
Trigger: TGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAA...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACACGGCTTTGGCTGTTaGCATGGTGATGCCTTTCGT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTHGFGC*HGDAFR
Trigger: ACGAAAGGCATCACCATGGCAACAGCCAAAGCCGTG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAAAGCGGCCAGCTGCTaGTTGAATTCTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSKAASC*LNSGVG
Trigger: ACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCTGTGTAGTGTTCGTTaGCTTGAGCAGCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRLCSVR*LEQHRS
Trigger: TGACCTGTGCTGCTCAAGGCAACGAACACTACACAG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCCTGGAAAGGCTTCGTaGTTGGAGGTAGCGAATCCA +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSPGKAS*LEVANP
Trigger: TGGATTCGCTACCTCCAAGCACGAAGCCTTTCCAGG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGTCCGGTTGAACTGCTaGTGCAAGATGGTGGACTTT +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGVRLNC*CKMVDF
Trigger: AAAGTCCACCATCTTGCAGCAGCAGTTCAACCGGAC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCTCTGGACCAGCTGCTaGTGGGCCGCAGGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKLWTSC*WAAGFL
Trigger: CAAGAACCCTGCGGCCCAGCAGCAGCTGGTCCAGAG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTCATTCTTAAGCGTCTaGACCGTATTCAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PALWRDRTRATTGTVVKISFLSV*TVFRAE
Trigger: TTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGTCTCCAGCATGGTCTTaGCTGAGACCAGGATTGGTT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRSPAWS*LRPGLV
Trigger: AACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGA...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCATGAACTCTCCAGCATaGTCTTGGCTGAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: HSKAKSTLATKESWSRKGMNSPA*SWLRPG
Trigger: TCCTGGTCTCAGCCAAGACCATGCTGGAGAGTTCAT...GCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGATGATCAAGAATCTTaGAGGCCACACCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKDDQES*RPHQLR
Trigger: CCGCAGTTGGTGTGGCCTCCAAGATTCTTGATCATC...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGATGATCAAGAATCTTaGAGGCCACACCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRDDQES*RPHQLR
Trigger: CCGCAGTTGGTGTGGCCTCCAAGATTCTTGATCATC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTGTTCCCTTTGGTTCTaGAGGAGTGCCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGCSLWF*RSAFIQ
Trigger: CTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAAGGTGCCCATAGTCACTaGTCATTTGTGAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKGAHSH*SFVKPV
Trigger: GACTGGCTTCACAAATGACCAGTGACTATGGGCACC...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCCACTAAGGAAAGCTaGTCTAGGAAAGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKATKES*SRKGRE
Trigger: TTCCCTGCCTTTCCTAGACCAGCTTTCCTTAGTGGC...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp TCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTTAGAAAGTGGCCTTTaGGGCCCAACTTTGGCTACC +
Preference number: 4 (lower is better)
Translates to: SYGYRHSKAKSTLATKESLESGL*GPTLAT
Trigger: GGTAGCCAAAGTTGGGCCCCAAAGGCCACTTTCTAA...GCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAGGAGATTTTTCGCATTaGGAGCTCCTGGATCTACAG +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAGDFSH*ELLDLQ
Trigger: CTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCC...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTTGGCCCGGAGCTTGTTaGGTACACAGAGTGATGAGT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSWPGAC*VHRVMS
Trigger: ACTCATCACTCTGTGTACCCAACAAGCTCCGGGCCA...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCACACGAGTGCGAATCTaGAATCCGATCTCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGTRVRI*NPISSG
Trigger: ACCAGAGGAGATCGGATTCCAGATTCGCACTCGTGT...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGAATTTTTCACCCCCTaGGTGAGCCAGTGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGREFFTP*VSQCSR
Trigger: TCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGTCAACTGGGAGCCGTaGGTTTGTGTGGATGACTCT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTVNWEP*VCVDDS
Trigger: AGAGTCATCCACACAAACCCACGGCTCCCAGTTGAC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAGTGTTTTCAGAGCTTaGGCCGTCTCTCTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSSVFRA*AVSLAA
Trigger: GGCTGCTAGAGAGACGGCCCAAGCTCTGAAAACACT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGAGATCATGGAGGGCCTaGCTGACCACGCTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKRSWRA*LTTLAA
Trigger: AGCGGCCAGCGTGGTCAGCCAGGCCCTCCATGATCT...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTCCGCAGGGTTCTTGTTaGAAACAGCTGCATTCTGGG +
Preference number: 4 (lower is better)
Translates to: RVFPDKSICREATGSSFLPQGSC*KQLHSG
Trigger: CCCAGAATGCAGCTGTTTCCAACAAGAACCCTGCGG...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGCAGGCATGAGGTGTTaGATCAGCTCCACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRAGMRC*ISSTQR
Trigger: TCTTTGAGTGGAGCTGATCCAACACCTCATGCCTGC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
3UTR CAA 72 bp AGTTTTCTGGGCCACAAAATACAAGATGGGTCTGGGTaGTACAAGGAGCTTACACACGGAGGCAAGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SFLGHKIQDGSG*YKELTHGGKKA
Trigger: CGCTTTCTTGCCTCCGTGTGTAAGCTCCTTGTACAACCCAGACCCATCTTGTATTTTGTGGCCCAGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
3UTR CAA 72 bp CACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTaGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: HSQMNSCLCYFP*KDQKAPSVPSE
Trigger: CTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCAGCGAATGAGGTACGATaGACTCTCCAGCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKAANEVR*TLQHGL
Trigger: AAGACCATGCTGGAGAGTTCATCGTACCTCATTCGC...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCACCATCGAGATATTCTTaGGGTTCCCTATCACTTGGA +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAPSRYS*GSLSLG
Trigger: TCCAAGTGATAGGGAACCTCAAGAATATCTCGATGG...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAGCTTCCGTCTTCTCCTaGGAGGAAGAAGAATATTCT +
Preference number: 4 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAASVFS*EEEEYS
Trigger: AGAATATTCTTCTTCCTCTCAGGAGAAGACGGAAGC...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCATCTGGACCTGTGCTGTaGAGTGGTGGGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKASGPVL*SGGEIN
Trigger: GTTTATTTCCCCACCACTGCACAGCACAGGTCCAGA...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR GCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTGGCCAGCCATCTCAATaGCAGCATCGAGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: RVFPDKSICREATGSSFLGQPSQ*QHRGIH
Trigger: ATGAATTCCTCGATGCTGGCATTGAGATGGCTGGCC...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGGCATGTGGCCTCGGTaGATCTGCCCAACCATGACC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLGMWPR*ICPTMT
Trigger: GGTCATGGTTGGGCAGATGCACCGAGGCCACATGCC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCCATCTTGGCATCCTaGAGTTCATTCTTAAGCGTC +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAILAS*SSFLSV
Trigger: GACGCTTAAGAATGAACTGCAGGATGCCAAGATGGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTACTGGCTCTCCACGGCTaGCATCTTGGCATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLLALHG*HLGILQ
Trigger: CTGCAGGATGCCAAGATGGCAGCCGTGGAGAGCCAG...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTATGAACTCTCCAGCATaGTCTTGGCTGAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSMNSPA*SWLRPG
Trigger: TCCTGGTCTCAGCCAAGACCATGCTGGAGAGTTCAT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGATGATCAAGAATCTTaGAGGCCACACCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSDDQES*RPHQLR
Trigger: CCGCAGTTGGTGTGGCCTCCAAGATTCTTGATCATC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGATGATCAAGAATCTTaGAGGCCACACCAACTGCGG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTDDQES*RPHQLR
Trigger: CCGCAGTTGGTGTGGCCTCCAAGATTCTTGATCATC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTTGTTCCCTTTGGTTCTaGAGGAGTGCCTTCATCCAG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSCSLWF*RSAFIQ
Trigger: CTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACA...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATTATCGCACTCTTTCTaGCCCGGAGCTTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTLSHSF*PGACWV
Trigger: TACCCAACAAGCTCCGGGCCAGAAAGAGTGCGATAA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAGAATGTTCTCCCTGTaGTCTGCGAAGGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSRMFSL*SAKVSL
Trigger: CAGTGAGACCTTCGCAGACCACAGGGAGAACATTCT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATTATGCATTCAATTGTaGCCTCAAGCGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTLCIQL*PQAPWC
Trigger: GCACCAGGGCGCTTGAGGCCACAATTGAATGCATAA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTTTCGTCATCCTTATaGATTCTTCAGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLSSSL*ILQVMM
Trigger: CATCATCACCTGAAGAATCCATAAGGATGACGAAAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTTCTTAATAGCATTCTaGGCAGCTGCGTTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKFLIAF*AAALVA
Trigger: AGCAACCAACGCAGCTGCCCAGAATGCTATTAAGAA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGCAGGCATGAGGTGTTaGATCAGCTCCACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSAGMRC*ISSTQR
Trigger: TCTTTGAGTGGAGCTGATCCAACACCTCATGCCTGC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGGGAACAGCAATTTCTaGCACAAAAATCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKGNSNF*HKNQPK
Trigger: CTTGGGCTGATTTTTGTGCCAGAAATTGCTGTTCCC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGACTCTGTTTCTGCAATaGCAGTTGGGTCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRTLFLQ*QLGLLD
Trigger: ATCCAGAAGACCCAACTGTCATTGCAGAAACAGAGT...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGAAGAGCGTATTTCCCTaGAGATATCCCAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKKSVFP*RYPKAC
Trigger: ACATGCTTTGGGATATCTTCAGGGAAATACGCTCTT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGGGCCGTTTTTACTCTaGCACCACTCTCTTATTAGG +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTGPFLL*HHSLIR
Trigger: CCTAATAAGAGAGTGGTGTCAGAGTAAAAACGGCCC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAAGGTCATCATCTGTGTaGAGCTTGGCCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTRSSSV*SLAFNF
Trigger: GAAGTTGAAGGCCAAGCTGCACACAGATGATGACCT...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGCAGGATGTCATCCCGTaGCTGAACATAAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRQDVIP*LNIKQV
Trigger: AACTTGCTTTATGTTCAGGCACGGGATGACATCCTG...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTACCCTGGGTGAGCCAGTaGTCAAGACATGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLPWVSQ*SRHGRR
Trigger: CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGG...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATGCTGGACTCCCCGATaGTCTTCAAGGCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLCWTPR*SSRPRP
Trigger: TGGACGTGGCCTTGAAGAGCATCGGGGAGTCCAGCA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAAACTGCCGCACATGCTaGAGGAGATCATGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLNCRTC*RRSWRA
Trigger: GGCCCTCCATGATCTCCTGCAGCATGTGCGGCAGTT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGTTGTCAAGATCTTTTaGTTTCTGAACTCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKVVKIF*FLNSGD
Trigger: GTCCCCAGAGTTCAGAAAGCAAAAGATCTTGACAAC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp ACTCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAATCGATTAAAGAGAGCTaGATCGGGTGTCTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TLTGTGILKPSLHWPLRKSIKES*IGCLWY
Trigger: GTACCACAGACACCCGATCCAGCTCTCTTTAATCGA...TTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp ACTCTTACGGGTACAGGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAATTTGGGGCCCAACTTTaGCTACCGTTAGACTCTTAC +
Preference number: 4 (lower is better)
Translates to: TLTGTGILKPSLHWPLRKFGAQL*LPLDSY
Trigger: GTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA...TTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCCTGTACCCGTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGAGGTTCCCTATCACTTaGATCTGGTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKRFPIT*IWSSFV
Trigger: GACAAAAGAAGACCAGATCCAAGTGATAGGGAACCT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGGGTCCACCAAGTTCTaGCATGCCATCTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKGSTKF*HAIWMA
Trigger: GGCCATCCAGATGGCATGCCAGAACTTGGTGGACCC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGACCACTTCTGCGAGCTaGGTGATGGTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKTTSAS*VMVAAE
Trigger: CTCAGCAGCCACCATCACCCAGCTCGCAGAAGTGGT...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCAGCATTGGCAGGGATaGAGCCCACCTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKQHWQG*SPPFLG
Trigger: CCCAAGGAAAGGTGGGCTCCATCCCTGCCAATGCTG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTGGGCACTGCGGCTTTaGCAGAGGACACCATCTTGC +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKWALRL*QRTPSC
Trigger: GCAAGATGGTGTCCTCTGCCAAAGCCGCAGTGCCCA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGCCCTTCCCTTCCTATaGGAGGGCTCTGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLALPFL*EGSEKG
Trigger: CCCCTTTTCAGAGCCCTCCCATAGGAAGGGAAGGGC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCTTTTGACCTGTGTCTaGTTCCTTGATGAGGTTTTG +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKLLTCV*FLDEVL
Trigger: CAAAACCTCATCAAGGAACCAGACACAGGTCAAAAG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTTCTATGTGTTCACACTaGTATAGATGCTACAAAGCT +
Preference number: 4 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPSMCSH*YRCYKA
Trigger: AGCTTTGTAGCATCTATATCAGTGTGAACACATAGA...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR TCA 90 bp AGGGTTTTCCCTGATAAAAGCATATGCCGTGAGGCTACAGGCAGCTCATTTCTTCACAGAGTGATGAGTTaGTTGATGCTCTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: RVFPDKSICREATGSSFLHRVMS*LMLSVT
Trigger: TGTGACAGAGAGCATCAATCAACTCATCACTCTGTG...AAGAAATGAGCTGCCTGTAGCCTCACGGCATATGCTTTTATCAGGGAAAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATGTTTCTGGCTTTTATaGACCATGTCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTCFWLL*TMSNSS
Trigger: GCTGGAGTTGGACATGGTTCATAAAAGCCAGAAACA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGATGGCCAGAGAGCGTaGAGTGCGAATGAGGTACGA +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLDGQRA*SANEVR
Trigger: TCGTACCTCATTCGCACTGCACGCTCTCTGGCCATC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGGGCTCAAAATAGCTTaGCAGTTGTGTCACCTTATG +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSGLKIA*QLCHLM
Trigger: CATAAGGTGACACAACTGGCAAGCTATTTTGAGCCC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTCACCAGGTTGGCAGTaGTGTTGGCGACTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKSPGWQ*CWRLPW
Trigger: CCAAGGAAGTCGCCAACAGCACTGCCAACCTGGTGA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTGTGCGGAGGGACCGTaGGAGTTTGACGTACTTGAC +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKCAEGP*EFDVLD
Trigger: GTCAAGTACGTCAAACTCGCACGGTCCCTCCGCACA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATTCTGGCATGCCATCTaGATGGCCTGGTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLFWHAI*MAWLAL
Trigger: CAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCTTCCCTCAGCTCGGTaGGTAAAAACTTATACTGCT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSLPSAR*VKTYTA
Trigger: AGCAGTATAAGTTTTTACCCACCGAGCTGAGGGAAG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAACTTCCCCAGCAGACTaGTTCAGATCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLTSPAD*FRSAAA
Trigger: GGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCCTCATTAAAACATCCTaGAATCGCTCATCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: MACSPLLTCVWFLDEVLALIKTS*NRSSVS
Trigger: TGAGACTGATGAGCGATTCCAGGATGTTTTAATGAG...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CCA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCATTTGGTTTGTCTCTaGAGGCTTTTCTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: HSEGTETSVGPKDESLRKHLVCL*RLFWYQ
Trigger: TTGATACCAGAAAAGCCTCCAGAGACAAACCAAATG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGTTGGTAACAGTCCATaGAACGTGCACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKVGNSP*NVHPSL
Trigger: GAGAGAGGGGTGCACGTTTCATGGACTGTTACCAAC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACTCGGTGGTTTGTACTaGATAGTAGCTTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTLGGLY*IVAFLI
Trigger: TATCAGGAAAGCTACTATTCAGTACAAACCACCGAG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGAGCTTCAATCAAGGGTaGGGTGGCGATGCGACACTT +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKSFNQG*GGDATL
Trigger: AAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCT...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGACAGAGAGCCTTGGATaGAATCCCCACACATTCCCC +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKTESLG*NPHTFP
Trigger: GGGGAATGTGTGGGGATTGCATCCAAGGCTCTCTGT...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAACAGAGAGCCTTGGATaGAATCCCCACACATTCCCC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLTESLG*NPHTFP
Trigger: GGGGAATGTGTGGGGATTGCATCCAAGGCTCTCTGT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGAGAAAGCGGCCAGCTaGTGCTTGAATTCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLEKAAS*CLNSGV
Trigger: AACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGAACTTTCCAGAGGCTaGAGCCAACTCTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLELSRG*SQLSTL
Trigger: CAGAGTGGAGAGTTGGCTGCAGCCTCTGGAAAGTTC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGACACATACTCTCACTTaGTTTTCCTTTACAGCGTCT +
Preference number: 4 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRTHTLT*FSFTAS
Trigger: AGACGCTGTAAAGGAAAAGCAAGTGAGAGTATGTGT...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTACATCCAGCTTGCTCATaGCTTCTGCAATGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLHPACS*LLQWRP
Trigger: TGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATG...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAGGTTCCCTATCACTTaGATCTGGTCTTCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSRFPIT*IWSSFV
Trigger: GACAAAAGAAGACCAGATCCAAGTGATAGGGAACCT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCTTTCGTCATCCTTATaGATTCTTCAGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGLSSSL*ILQVMM
Trigger: CATCATCACCTGAAGAATCCATAAGGATGACGAAAG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCTGCTGCTTGAATTCTaGGGTTGGTTTCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSLLLEF*GWFLKN
Trigger: ATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACACTGCTGCTTGAATTCTaGGGTTGGTTTCTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTLLLEF*GWFLKN
Trigger: ATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAG...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCCAAAAGCTGCCTTCTaGGCTGCACGGACAAGATTG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKPKAAF*AARTRL
Trigger: CAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTACCAGTGCTCAAGACATaGAAGGAGGACCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLPVLKT*KEDLSH
Trigger: GTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAAGATCAGCTGCTGCCTaGTTCAGTTCACTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLRSAAA*FSSLWA
Trigger: AGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCCTCCTCTTCAGAACTaGTGCCCACACACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKPPLQN*CPHTVS
Trigger: ACTGACAGTGTGTGGGCACCAGTTCTGAAGAGGAGG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATGTATTTTAAAACCATaGCATGGGCTAGAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TFPRQWNFETIVWMESKTCILKP*HGLESG
Trigger: ACCAGACTCTAGCCCATGTCATGGTTTTAAAATACA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTGCCTTCATCCAGCTTaGTCATGGCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKCLHPA*SWLLQW
Trigger: CCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGAGTCGGACACTGTATaGGAATGTCCAGCCAGTACA +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLESDTV*ECPAST
Trigger: TGTACTGGCTGGACATTCCCATACAGTGTCCGACTC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAAAAGGCGTTTTGGGTTaGAGGACAGGGGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLKGVLG*RTGDRF
Trigger: AAACCTGTCCCCTGTCCTCCAACCCAAAACGCCTTT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTGTGACTCTGAGCATTaGGGTCTGACTCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKCDSEH*GLTPEC
Trigger: ACACTCAGGAGTCAGACCCCAATGCTCAGAGTCACA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTCTATGCTCCAGACCTaGGGCCGTTTTTACTCTGAC +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKSMLQT*GRFYSD
Trigger: GTCAGAGTAAAAACGGCCCCAGGTCTGGAGCATAGA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATTAGTCATCATTTCCTaGGCTGTCACCGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLLVIIS*AVTAMA
Trigger: AGCCATTGCGGTGACAGCTCAGGAAATGATGACTAA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAAGAGGGGAAAAATATaGAATTCTGGAAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSKRGKI*NSGSVT
Trigger: TGTCACACTTCCAGAATTTCATATTTTTCCCCTCTT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATGTTACAGGAGGCCATaGACACATTGTGACTCTGAG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLCYRRP*THCDSE
Trigger: CTCAGAGTCACAATGTGTTCATGGCCTCCTGTAACA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR GCA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCAGCAGCTTGCTGGATaGCATCGAGATATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKQQLAG*HRDILE
Trigger: CTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGTGTCTTCGGCCACTTaGGCAACATTCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLVSSAT*ATFFAF
Trigger: AAAGGCAAAGAATGTTGCCCAAGTGGCCGAAGACAC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR GCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGGGCTCAAAATAGCTTaGCAGTTGTGTCACCTTATG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLGLKIA*QLCHLM
Trigger: CATAAGGTGACACAACTGGCAAGCTATTTTGAGCCC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR TCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAGTTCACACTCCCAAATaGACTCATGCCTGTGTTATT +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLVHTPK*THACVI
Trigger: AATAACACAGGCATGAGTTCATTTGGGAGTGTGAAC...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CCA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTACTTTCGTCATCCTTATaGATTCTTCAGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLLSSSL*ILQVMM
Trigger: CATCATCACCTGAAGAATCCATAAGGATGACGAAAG...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp GCAGGGCCTCCACAGAGATGTCGTCCCTCGTGGCCAGGCTCTGGCTaGCGGCGGCCAGCGAGGCCTGCTCGATGTCCCGGATGCACCGGT +
Preference number: 5 (lower is better)
Translates to: AGPPQRCRPSWPGSG*RRPARPARCPGCTG
Trigger: ACCGGTGCATCCGGGACATCGAGCAGGCCTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCACGAGGGACGACATCTCTGTGGAGGCCCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000467297.1
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp CTCAGGCCCGCTGGAGCCCGAGCGCATCACGGCCGGCAGCGCCACTaGGCCGTGCTCTGCCTTCCCGGTCCGGTTGAACTGCTGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LRPAGARAHHGRQRH*AVLCLPGPVELLLQ
Trigger: TTGCAGCAGCAGTTCAACCGGACCGGGAAGGCAGAGCACGGCTCAGTGGCGCTGCCGGCCGTGATGCGCTCGGGCTCCAGCGGGCCTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 90 bp CCGCTGGAGCCCGAGCGCATCACGGCCGGCAGCGCCACTGAGCCGTaGTCTGCCTTCCCGGTCCGGTTGAACTGCTGCTGCAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PLEPERITAGSATEP*SAFPVRLNCCCKMV
Trigger: CACCATCTTGCAGCAGCAGTTCAACCGGACCGGGAAGGCAGAGCACGGCTCAGTGGCGCTGCCGGCCGTGATGCGCTCGGGCTCCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp GCGGCCGCGGGGTCGGTTGTCGATGCAGCCACTCCACGGGCGGCCTaGGCCAGTGTTTTCAGAGCTTGGGCCGTCTCTCTAGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: AAAGSVVDAATPRAA*ASVFRAWAVSLAAT
Trigger: GGTGGCTGCTAGAGAGACGGCCCAAGCTCTGAAAACACTGGCCCAGGCCGCCCGTGGAGTGGCTGCATCGACAACCGACCCCGCGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp CCTGTAGCCGCCTCATGGCCTCTGAATCCTGGTCGGCCTTCACCTTaGAGGCCACCAGCAGCTGAGCCGTGGAAGCGGCGACCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PVAASWPLNPGRPSP*RPPAAEPWKRRPAW
Trigger: CCAAGCAGGTCGCCGCTTCCACGGCTCAGCTGCTGGTGGCCTGCAAGGTGAAGGCCGACCAGGATTCAGAGGCCATGAGGCGGCTACAGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp ATGGCGGAGCCCTCCATCACGTCTCGAGCAGAATCTAACATGGCATaGGCGGCCGCGGGGTCGGTTGTCGATGCAGCCACTCCACGGGCG +
Preference number: 5 (lower is better)
Translates to: MAEPSITSRAESNMA*AAAGSVVDAATPRA
Trigger: CGCCCGTGGAGTGGCTGCATCGACAACCGACCCCGCGGCCGCCCATGCCATGTTAGATTCTGCTCGAGACGTGATGGAGGGCTCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGAGCCCACCGCCTaGGATGTGCTTCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTREEPTA*DVLPRS
Trigger: GGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCTC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGAGGAGCCCACCGCCTaGGATGTGCTTCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGEEPTA*DVLPRS
Trigger: GGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCTC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGGCAGCTGCGTTGGTaGCTACCCGGAGGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGQLRW*LPGGLL
Trigger: CAGAAGGCCTCCGGGTAGCAACCAACGCAGCTGCCC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 90 bp ATGCTGCAGGAGATCATGGAGGGCCTGGCTGACCACGCTGGCCGCTaGGCTGACCTGCTTCAGGAGCTCACTATCGGTAGTGGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: MLQEIMEGLADHAGR*ADLLQELTIGSGRL
Trigger: CAGGCGGCCACTACCGATAGTGAGCTCCTGAAGCAGGTCAGCGCAGCGGCCAGCGTGGTCAGCCAGGCCCTCCATGATCTCCTGCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCGTCATGGGTGTGTaGTGCCTTGGGGTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGVMGV*CLGVSA
Trigger: GGCGGAAACCCCAAGGCACAACACACCCATGACGCC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGCCGCCTGGGCCAGCTaGTCAGGAGTGGACGCAGCT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGAAWAS*SGVDAA
Trigger: AGCTGCGTCCACTCCTGACAAGCTGGCCCAGGCGGC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCCTGGAGGGACTGTGTaGACCGACTGCAGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREPGGTV*TDCRAN
Trigger: GTTGGCCCTGCAGTCGGTCAACACAGTCCCTCCAGG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp GTGCAACAGCTCCCTCCTCATCCATGGAGGGCTGCTGGCACCTACTaGGGTGTCTGGCTCAGGAAGTTCCACAGGCTCCACCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: VQQLPPHPWRAAGTY*GVWLRKFHRLHPAS
Trigger: GCTGGCGGGGTGGAGCCTGTGGAACTTCCTGAGCCAGACACCTCAGTAGGTGCCAGCAGCCCTCCATGGATGAGGAGGGAGCTGTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp CCGAGAGGTGGCAGCGAGTCGAGCTCACTGAGATCATCCTGGGCCTaGTGGACGGCGTGCATGCTTGTGTTGATGGTCCCCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PRGGSESSSLRSSWA*WTACMLVLMVPIRA
Trigger: GGCCCTGATGGGGACCATCAACACAAGCATGCACGCCGTCCAGCAGGCCCAGGATGATCTCAGTGAGCTCGACTCGCTGCCACCTCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp CTGCTGCCAGGGTCCACCAAGTTCTGGCATGCCATCTGGATGGCCTaGTTAGCCCTGGCAAACTGGATGGGGTCCACCAGGCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LLPGSTKFWHAIWMA*LALANWMGSTRPWW
Trigger: CCACCAGGGCCTGGTGGACCCCATCCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp CTGTCTGTCCAGTTCAGCCAGGGCCATCCCCTGGGGCTCGCCATCTaGGCTCGCACCTTTAGCCCTCATCTTCCCTCAGCTCGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LSVQFSQGHPLGLAI*ARTFSPHLPSARWV
Trigger: TACCCACCGAGCTGAGGGAAGATGAGGGCTAAAGGTGCGAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGCTGAACTGGACAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCAGGTGGGTGGGTCTTaGGGGTTGATGGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREQVGGS*GLMARE
Trigger: CTCTCTGGCCATCAACCCCAAAGACCCACCCACCTG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCTGGCTGCCCCCAGCTaGACCACTTCTGCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTLAAPS*TTSASW
Trigger: CCAGCTCGCAGAAGTGGTCAAGCTGGGGGCAGCCAG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGCGCCGGCGACTCGCTaGGAGAAAGCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFAPATR*EKAASC
Trigger: GCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCGC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGAGCCCACCTTTCCTaGGGCCACCAGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHGAHLS*GHQLPL
Trigger: CAGAGGGAGCTGGTGGCCCAAGGAAAGGTGGGCTCC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCCGTCGTCTGCAGCATaGGCAGGGATGGAGCCCACC +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTPSSAA*AGMEPT
Trigger: GGTGGGCTCCATCCCTGCCAATGCTGCAGACGACGG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCGGCCGCGGGGTCGGTaGTCGATGCAGCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCRPRGR*SMQPLH
Trigger: GTGGAGTGGCTGCATCGACAACCGACCCCGCGGCCG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp GCCCCTGCCTTCTGCACCAGGAAGATACAGCCGTGGCCCAGGTCCTaGACACGAGTGCGAATCTGGAATCCGATCTCCTCTGGTTCCGCC +
Preference number: 5 (lower is better)
Translates to: APAFCTRKIQPWPRS*TRVRIWNPISSGSA
Trigger: GGCGGAACCAGAGGAGATCGGATTCCAGATTCGCACTCGTGTGCAGGACCTGGGCCACGGCTGTATCTTCCTGGTGCAGAAGGCAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp GCCTCTCAGGAACACTGTCTGTCCAGTTCAGCCAGGGCCATCCCCTaGGGCTCGCCATCTGGGCTCGCACCTTTAGCCCTCATCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ASQEHCLSSSARAIP*GSPSGLAPLALIFP
Trigger: AGGGAAGATGAGGGCTAAAGGTGCGAGCCCAGATGGCGAGCCCCAGGGGATGGCCCTGGCTGAACTGGACAGACAGTGTTCCTGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TCCTGGCCGAGAGGTGGCAGCGAGTCGAGCTCACTGAGATCATCCTaGGCCTGCTGGACGGCGTGCATGCTTGTGTTGATGGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: SWPRGGSESSSLRSS*ACWTACMLVLMVPI
Trigger: GATGGGGACCATCAACACAAGCATGCACGCCGTCCAGCAGGCCCAGGATGATCTCAGTGAGCTCGACTCGCTGCCACCTCTCGGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATGGGTGTGTTGTGCCTaGGGGTTTCCGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGWVCCA*GFPPPS
Trigger: AGAAGGTGGCGGAAACCCCAAGGCACAACACACCCA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGCTGGCCCGGAGCTTGTaGGGTACACAGAGTGATGAG +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPLARSL*GTQSDE
Trigger: CTCATCACTCTGTGTACCCAACAAGCTCCGGGCCAG...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCTGGCCCGGAGCTTGTaGGGTACACAGAGTGATGAG +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRELARSL*GTQSDE
Trigger: CTCATCACTCTGTGTACCCAACAAGCTCCGGGCCAG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTGGCCCGGAGCTTGTaGGGTACACAGAGTGATGAG +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLARSL*GTQSDE
Trigger: CTCATCACTCTGTGTACCCAACAAGCTCCGGGCCAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGCTGTTGGCGACTTCCTaGGCTGACTGGACGAAGTGC +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRELLATS*ADWTKC
Trigger: GCACTTCGTCCAGTCAGCCAAGGAAGTCGCCAACAG...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCCCCATCCAGGGCCTaGATGGTCTTCACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESPSRA*MVFTRL
Trigger: CAACCTGGTGAAGACCATCAAGGCCCTGGATGGGGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCATGCCTGGGTTCCTTaGTTCCCGGCCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHHAWVP*FPAWRA
Trigger: GGCTCTCCAGGCCGGGAACAAAGGAACCCAGGCATG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGCTTTCCGGCTCAGGTaGGCAGTAGCAATCACGTCC +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPAFRLR*AVAITS
Trigger: GGACGTGATTGCTACTGCCAACCTGAGCCGGAAAGC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCGGCCAGCTGCTGCTaGAATTCTGGGGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRAASCC*NSGVGF
Trigger: GAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGCGCCGGCGACTCGCTaGGAGAAAGCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIAPATR*EKAASC
Trigger: GCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCGC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCTGCTGAGGCCGATTaGACCAGGGCGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHAAEAD*TRALVA
Trigger: TGCCACAAGCGCCCTGGTCAAATCGGCCTCAGCAGC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCCGTCGTCTGCAGCATaGGCAGGGATGGAGCCCACC +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGPSSAA*AGMEPT
Trigger: GGTGGGCTCCATCCCTGCCAATGCTGCAGACGACGG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATCCACAAGCAGCTTCTaGCTGGACTCCCCGATGCTC +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGSTSSF*LDSPML
Trigger: GAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGGA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAAGCAGCCAGCCCCTaGGTCAACAGAGGGTACCTT +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTREAASP*VNRGYL
Trigger: AAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp CCTGCTCCAGCACTGGTGGGCCAGGATCCCTGTCCACTTCCTCCCTaGCACAGTCACCTCCTTTCAGGAGGAATCCCTGACCCCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PAPALVGQDPCPLPP*HSHLLSGGIPDPWL
Trigger: CAACCAGGGGTCAGGGATTCCTCCTGAAAGGAGGTGACTGTGTCAGGGAGGAAGTGGACAGGGATCCTGGCCCACCAGTGCTGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS TCA 90 bp CTGTCGAGGCTCTCCAGAAGTAGGCTGCACAGCTTTCAGCAAGTCTaGCACCGCCCCAGCGAGGGTCCTGGCAGCTCTGAGCAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LSRLSRSRLHSFQQV*HRPSEGPGSSEQVL
Trigger: GAGGACTTGCTCAGAGCTGCCAGGACCCTCGCTGGGGCGGTGTCAGACTTGCTGAAAGCTGTGCAGCCTACTTCTGGAGAGCCTCGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 90 bp AGGGGTCTTAAGGTGGCAGACCTCCTCTGGTTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGCCAGGTGCCCATAGTCACTGGTCAT +
Preference number: 5 (lower is better)
Translates to: RGLKVADLLWFRRGC*HLALESQVPIVTGH
Trigger: ATGACCAGTGACTATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGGTCTGCCACCTTAAGACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS GCA 90 bp GCAGGCACGGACACAGTTCTCCACCGAGCGGTCCACCAGCTTCCCTaGTTCAATCAGCTGCTCCTGGCACACAGGGGAGCTAATAGTGGG +
Preference number: 5 (lower is better)
Translates to: AGTDTVLHRAVHQLP*FNQLLLAHRGANSG
Trigger: CCCACTATTAGCTCCCCTGTGTGCCAGGAGCAGCTGATTGAAGCAGGGAAGCTGGTGGACCGCTCGGTGGAGAACTGTGTCCGTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp GGCCTTGTCCCTGGAAGGAATAGTGCAAGTTGGACACAGGCTCCATaGGGCTCAAGTCCCACAGCCTGCTCCAGCACTGGTGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GLVPGRNSASWTQAP*GSSPTACSSTGGPG
Trigger: TCCTGGCCCACCAGTGCTGGAGCAGGCTGTGGGACTTGAGCCCCATGGAGCCTGTGTCCAACTTGCACTATTCCTTCCAGGGACAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 90 bp CTCCCTCTGTCCAGGGGCCTTGTCCCTGGAAGGAATAGTGCAAGTTaGACACAGGCTCCATGGGGCTCAAGTCCCACAGCCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LPLSRGLVPGRNSAS*TQAPWGSSPTACSS
Trigger: GCTGGAGCAGGCTGTGGGACTTGAGCCCCATGGAGCCTGTGTCCAACTTGCACTATTCCTTCCAGGGACAAGGCCCCTGGACAGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 90 bp TGTGATGGGCTGCTGCCAGGGTCCACCAAGTTCTGGCATGCCATCTaGATGGCCTGGTTAGCCCTGGCAAACTGGATGGGGTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: CDGLLPGSTKFWHAI*MAWLALANWMGSTR
Trigger: CCTGGTGGACCCCATCCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TCTCCACTCTGGCCCCGGGTGGCATGGACCACTTCCCCAGCAGACTaGTTCAGATCAGCTGCTGCCTGGTTCAGTTCACTCTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPLWPRVAWTTSPAD*FRSAAAWFSSLWAS
Trigger: GGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGTGGTCCATGCCACCCGGGGCCAGAGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGGCGTCATGGGTGTGTaGTGCCTTGGGGTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGGVMGV*CLGVSA
Trigger: GGCGGAAACCCCAAGGCACAACACACCCATGACGCC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGAGCCCACAGAGAGCCTaGGATGCAATCCCCACACAT +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPSPQRA*DAIPTH
Trigger: ATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGCT...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGCGATGCGGCAGGCATaGCACAAGGCTGACGTGTGC +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGAMRQA*HKADVC
Trigger: GCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGACTGGGTTGGCCGTCTaGGATGAGGCGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGTGLAV*DEAMRQ
Trigger: CTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGT...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCTCTTGGCTACTGGGTaGGCCGTCTTGGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTLLATG*AVLDEA
Trigger: CGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATGGACGAAGTGCCTCTaGGCTACTGGGTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGWTKCL*ATGLAV
Trigger: GACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAATGGTCTTCACCAGGTaGGCAGTGCTGTTGGCGACT +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGMVFTR*AVLLAT
Trigger: AGTCGCCAACAGCACTGCCAACCTGGTGAAGACCAT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGAGGAGCGAGGTGACATaGGTCACCATCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRRSEVT*VTITLA
Trigger: TGCCAAGGTGATGGTGACCAATGTCACCTCGCTCCT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGCGGCCAGCTGCTGCTaGAATTCTGGGGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGAASCC*NSGVGF
Trigger: GAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGAGCCCACCTTTCCTaGGGCCACCAGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGAHLS*GHQLPL
Trigger: CAGAGGGAGCTGGTGGCCCAAGGAAAGGTGGGCTCC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGTAGTGTTCGTTGCCTaGAGCAGCACAGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRVVFVA*SSTGQQ
Trigger: CTGCTGACCTGTGCTGCTCAAGGCAACGAACACTAC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTAGTGTTCGTTGCCTaGAGCAGCACAGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPVVFVA*SSTGQQ
Trigger: CTGCTGACCTGTGCTGCTCAAGGCAACGAACACTAC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCGGCCGCGGGGTCGGTaGTCGATGCAGCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKRPRGR*SMQPLH
Trigger: GTGGAGTGGCTGCATCGACAACCGACCCCGCGGCCG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGACTGAGCCAGTCTTTGTaGACGCTCTGCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLSQSL*TLCISR
Trigger: CCTGGAGATGCAGAGCGTCAACAAAGACTGGCTCAG...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCCGCTGCGGCCTGCTaGGCTGCAACCTCCAGTCGG +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAAAAC*AATSSR
Trigger: CCGACTGGAGGTTGCAGCCAAGCAGGCCGCAGCGGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTGGGCACTGCGGCTTaGGCAGAGGACACCATCTTG +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGVGTAA*AEDTIL
Trigger: CAAGATGGTGTCCTCTGCCAAAGCCGCAGTGCCCAC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGGCAGGCATGAGGTGTaGGATCAGCTCCACTCAAAG +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGGRHEV*DQLHSK
Trigger: CTTTGAGTGGAGCTGATCCAACACCTCATGCCTGCC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp AATAGGGGTCTTAAGGTGGCAGACCTCCTCTGGTTCCGCCGTGGCTaGTGCCATCTGGCCCTGGAAAGCCAGGTGCCCATAGTCACTGGT +
Preference number: 5 (lower is better)
Translates to: NRGLKVADLLWFRRG*CHLALESQVPIVTG
Trigger: ACCAGTGACTATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGGTCTGCCACCTTAAGACCCCTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS GCA 90 bp GCGTTGGTTGCTACCCGGAGGCCTTCTGCAGCTTCTCTCAGCCTTTaGTGCTGGTCCTCATTCTCTGGGTTGGCTGCAGCCCCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: ALVATRRPSAASLSL*CWSSFSGLAAAPFA
Trigger: TGCAAAGGGGGCTGCAGCCAACCCAGAGAATGAGGACCAGCAGCAAAGGCTGAGAGAAGCTGCAGAAGGCCTCCGGGTAGCAACCAACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp GCCTGGTTAGCCCTGGCAAACTGGATGGGGTCCACCAGGCCCTGGTaGCCTGCCTGGCTGTTTGGATCAGAGATGCCAACCAAGTATGCA +
Preference number: 5 (lower is better)
Translates to: AWLALANWMGSTRPW*PAWLFGSEMPTKYA
Trigger: TGCATACTTGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGCCACCAGGGCCTGGTGGACCCCATCCAGTTTGCCAGGGCTAACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp CGACTTCCTTGGCTGACTGGACGAAGTGCCTCTTGGCTACTGGGTTaGCCGTCTTGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTG +
Preference number: 5 (lower is better)
Translates to: RLPWLTGRSASWLLG*PSWMRRCGRHCTRL
Trigger: CAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGCCAAGGAAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TGGTGGCTGCTGAGGACTGGGCCGCCTGGGCCAGCTTGTCAGGAGTaGACGCAGCTCCTGACACAAGTAGTTTCGTGTCTTCTACCAAGG +
Preference number: 5 (lower is better)
Translates to: WWLLRTGPPGPACQE*TQLLTQVVSCLLPR
Trigger: CCTTGGTAGAAGACACGAAACTACTTGTGTCAGGAGCTGCGTCCACTCCTGACAAGCTGGCCCAGGCGGCCCAGTCCTCAGCAGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TGTAGTGTTCGTTGCCTTGAGCAGCACAGGTCAGCAGCTGTGCCATaGAGGAGCCCACCGCCTTGGATGTGCTTCCCAGGTCCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: CSVRCLEQHRSAAVP*RSPPPWMCFPGPEH
Trigger: GTGCTCAGGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCTCCATGGCACAGCTGCTGACCTGTGCTGCTCAAGGCAACGAACACTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp GCTGACAGGACCTGTGATGGGCTGCTGCCAGGGTCCACCAAGTTCTaGCATGCCATCTGGATGGCCTGGTTAGCCCTGGCAAACTGGATG +
Preference number: 5 (lower is better)
Translates to: ADRTCDGLLPGSTKF*HAIWMAWLALANWM
Trigger: CATCCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTCCTGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTGACAGGACCTGTGATGGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: WMRRCGRHCTRLTCA*QQLWRLTGPVMGCC
Trigger: GCAGCAGCCCATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCAGCTAACAGCAGCTaGCTGGATGCCATCGAGATA +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGAANSS*LDAIEI
Trigger: TATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCAGCTAACAGCAGCTaGCTGGATGCCATCGAGATA +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRAANSS*LDAIEI
Trigger: TATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTGC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCGATGCGGCAGGCATaGCACAAGGCTGACGTGTGC +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLAMRQA*HKADVC
Trigger: GCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTCCCCATCCAGGGCCTaGATGGTCTTCACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHSPSRA*MVFTRL
Trigger: CAACCTGGTGAAGACCATCAAGGCCCTGGATGGGGA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGCCGCCTGGGCCAGCTaGTCAGGAGTGGACGCAGCT +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVAAWAS*SGVDAA
Trigger: AGCTGCGTCCACTCCTGACAAGCTGGCCCAGGCGGC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCCGCCTGGGCCAGCTaGTCAGGAGTGGACGCAGCT +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAAWAS*SGVDAA
Trigger: AGCTGCGTCCACTCCTGACAAGCTGGCCCAGGCGGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACTGGCTGCCCCCAGCTaGACCACTTCTGCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLLAAPS*TTSASW
Trigger: CCAGCTCGCAGAAGTGGTCAAGCTGGGGGCAGCCAG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATTGCTGGCAGCTCCCTaGGTAGCACTGATGAGATCA +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGLLAAP*VALMRS
Trigger: TGATCTCATCAGTGCTACCAAGGGAGCTGCCAGCAA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGGGTCGTCCACTGGCTaGCTGGCAGCTCCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFGSSTG*LAAPLV
Trigger: TACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTTGGCAGCCCCCTaGAGCTGGTACATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRTLAAP*SWYMEG
Trigger: CCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGGT...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGCTTTATGCATTCAATaGTGGCCTCAAGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRALCIQ*WPQAPW
Trigger: CCAGGGCGCTTGAGGCCACAATTGAATGCATAAAGC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGCTTTATGCATTCAATaGTGGCCTCAAGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGALCIQ*WPQAPW
Trigger: CCAGGGCGCTTGAGGCCACAATTGAATGCATAAAGC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGGAGCCCACCTTTCCTaGGGCCACCAGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIGAHLS*GHQLPL
Trigger: CAGAGGGAGCTGGTGGCCCAAGGAAAGGTGGGCTCC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATCCACAAGCAGCTTCTaGCTGGACTCCCCGATGCTC +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGSTSSF*LDSPML
Trigger: GAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGGA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACTCCACAAGCAGCTTCTaGCTGGACTCCCCGATGCTC +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHSTSSF*LDSPML
Trigger: GAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGGA...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGATCTGGTCTTCTTTaGTCTGAGCTTGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPGSGLL*SELGQP
Trigger: TGGCTGGCCAAGCTCAGACAAAAGAAGACCAGATCC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGGATCTGGTCTTCTTTaGTCTGAGCTTGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGGSGLL*SELGQP
Trigger: TGGCTGGCCAAGCTCAGACAAAAGAAGACCAGATCC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGCGTGCATGCTTGTGTaGATGGTCCCCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAACMLV*MVPIRA
Trigger: GGCCCTGATGGGGACCATCAACACAAGCATGCACGC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTCTGGGCAGCTGCGTaGGTTGCTACCCGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFFWAAA*VATRRP
Trigger: AGGCCTCCGGGTAGCAACCAACGCAGCTGCCCAGAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 90 bp TGCCTTCATCCAGCTTGCTCATGGCTTCTGCAATGGCGTCCACCATaGCCCCAACCAGCCCCACTTCACTGGCAGCTTCGTTCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: CLHPACSWLLQWRPP*PQPAPLHWQLRSAS
Trigger: TGACGCTGAACGAAGCTGCCAGTGAAGTGGGGCTGGTTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp TGGCTACTGGGTTGGCCGTCTTGGATGAGGCGATGCGGCAGGCATTaGACAAGGCTGACGTGTGCTTGGCAACAATTGTGGCGGCTGACA +
Preference number: 5 (lower is better)
Translates to: WLLGWPSWMRRCGRH*TRLTCAWQQLWRLT
Trigger: TGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp AGTGCGAATCTGGAATCCGATCTCCTCTGGTTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGCCAGGTGCCCATAGTCACTGGTCAT +
Preference number: 5 (lower is better)
Translates to: SANLESDLLWFRRGC*HLALESQVPIVTGH
Trigger: ATGACCAGTGACTATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGATCGGATTCCAGATTCGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp GTCTTGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCGGCTGACAGGACCTGTGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: VLDEAMRQALHKADV*LATIVAADRTCDGL
Trigger: CAGCCCATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp TTGGTTGCTACCCGGAGGCCTTCTGCAGCTTCTCTCAGCCTTTGCTaGTGGTCCTCATTCTCTGGGTTGGCTGCAGCCCCCTTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LVATRRPSAASLSLC*WSSFSGLAAAPFAA
Trigger: AGCTGCAAAGGGGGCTGCAGCCAACCCAGAGAATGAGGACCAGCAGCAAAGGCTGAGAGAAGCTGCAGAAGGCCTCCGGGTAGCAACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp TCCACCGAGCGGTCCACCAGCTTCCCTGCTTCAATCAGCTGCTCCTaGCACACAGGGGAGCTAATAGTGGGGCTCACAACCTTGGCACAT +
Preference number: 5 (lower is better)
Translates to: STERSTSFPASISCS*HTGELIVGLTTLAH
Trigger: ATGTGCCAAGGTTGTGAGCCCCACTATTAGCTCCCCTGTGTGCCAGGAGCAGCTGATTGAAGCAGGGAAGCTGGTGGACCGCTCGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACTCTCCAGCATGGTCTaGGCTGAGACCAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGLSSMV*AETRIG
Trigger: ACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGAG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCAGGTGGGTGGGTCTTaGGGGTTGATGGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCQVGGS*GLMARE
Trigger: CTCTCTGGCCATCAACCCCAAAGACCCACCCACCTG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCTCTGTCCAGGGGCCTaGTCCCTGATAGAAGTGATG +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTLCPGA*SLIEVM
Trigger: CATCACTTCTATCAGGGACAAGGCCCCTGGACAGAG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGACTCTGCGAGAGTCTaGGTCTGGTCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLDSARV*VWSSTV
Trigger: GACGGTGCTGGACCAGACCAAGACTCTCGCAGAGTC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTGGGTGTGTTGTGCCTaGGGGTTTCCGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRWVCCA*GFPPPS
Trigger: AGAAGGTGGCGGAAACCCCAAGGCACAACACACCCA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGAGTGTCCTGTCTTTTTaGAGTGTGCCCGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRSVLSF*SVPVPS
Trigger: GGAAGGAACGGGCACACTCAAAAAAGACAGGACACT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATCTACAGAGAGAGACTaGGCAGCTAACAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGSTERD*AANSSL
Trigger: CAAGCTGCTGTTAGCTGCCAAGTCTCTCTCTGTAGA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGGCCTGCCTGGCTGTTaGGATCAGAGATGCCAACCA +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAGLPGC*DQRCQP
Trigger: TGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGCC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAGCGATGCGGCAGGCATaGCACAAGGCTGACGTGTGC +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIAMRQA*HKADVC
Trigger: GCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGC...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAACTGGGTTGGCCGTCTaGGATGAGGCGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLTGLAV*DEAMRQ
Trigger: CTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGT...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAACTGGGTTGGCCGTCTaGGATGAGGCGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKITGLAV*DEAMRQ
Trigger: CTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTGTTGGCGACTTCCTaGGCTGACTGGACGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGLLATS*ADWTKC
Trigger: GCACTTCGTCCAGTCAGCCAAGGAAGTCGCCAACAG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTCCCCATCCAGGGCCTaGATGGTCTTCACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLASPSRA*MVFTRL
Trigger: CAACCTGGTGAAGACCATCAAGGCCCTGGATGGGGA...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACATGCCTGGGTTCCTTaGTTCCCGGCCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLHAWVP*FPAWRA
Trigger: GGCTCTCCAGGCCGGGAACAAAGGAACCCAGGCATG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGTCTTCTACCAAGGCCTaGGCCGTCTTGAGAATGTTC +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTRESSTKA*AVLRMF
Trigger: GAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGA...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGACCTTGGCAGCCCCCTaGAGCTGGTACATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLTLAAP*SWYMEG
Trigger: CCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGGT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTGGTCACCATCACCTaGGCAGCCCCCTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLVTIT*AAPLSW
Trigger: CCAGCTCAAGGGGGCTGCCAAGGTGATGGTGACCAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCCGTCGTCTGCAGCATaGGCAGGGATGGAGCCCACC +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKPSSAA*AGMEPT
Trigger: GGTGGGCTCCATCCCTGCCAATGCTGCAGACGACGG...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGTTGTGGGTAGGACATaGTACCGTGTGACATCACGA +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREVVGRT*YRVTSR
Trigger: TCGTGATGTCACACGGTACAATGTCCTACCCACAAC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGAGGCGGCAGAGGAGTaGTGGGTAGGACATTGTACC +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRREAAEE*WVGHCT
Trigger: GGTACAATGTCCTACCCACAACTCCTCTGCCGCCTC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGAGGAGCCCACCGCCTaGGATGTGCTTCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKEEPTA*DVLPRS
Trigger: GGACCTGGGAAGCACATCCAAGGCGGTGGGCTCCTC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGCGGCCGCGGGGTCGGTaGTCGATGCAGCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKRPRGR*SMQPLH
Trigger: GTGGAGTGGCTGCATCGACAACCGACCCCGCGGCCG...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCACCTGAGCCAGTCTTaGTTGACGCTCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTHLSQS*LTLCIS
Trigger: GGAGATGCAGAGCGTCAACAAAGACTGGCTCAGGTG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGATTCTTTTGTCTGAGCTaGGCCAGCCATCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGFFCLS*ASHLNA
Trigger: GGCATTGAGATGGCTGGCCAAGCTCAGACAAAAGAA...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATGGCTGCAGCCCCCTTaGCAGCTTCCACCATGCGAG +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLWLQPP*QLPPCE
Trigger: CTCGCATGGTGGAAGCTGCAAAGGGGGCTGCAGCCA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGCCTTGGCATCACTTaGGAGGTGGGGTTTACTCTC +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHGLGIT*EVGFTL
Trigger: GAGAGTAAACCCCACCTCCAAAGTGATGCCAAGGCC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCAGCAGAGACCATGGCTaGCTCACCACTTTTGACCTG +
Preference number: 5 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGSRDHG*LTTFDL
Trigger: CAGGTCAAAAGTGGTGAGCAAGCCATGGTCTCTGCT...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGTGGGCACTGCGGCTTaGGCAGACTTTCTTAAATTC +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREVGTAA*ADFLKF
Trigger: GAATTTAAGAAAGTCTGCCAAAGCCGCAGTGCCCAC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636159.1
CDS GCA 90 bp GAAGAATCACCAAGACGTGCTCCAGGAGGTCCAAGTAGCCAAGGGTaGACTCCGTCCCGAAACGCAAGGCTCTGGTTCTCACCTCGTCAC +
Preference number: 5 (lower is better)
Translates to: EESPRRAPGGPSSQG*TPSRNARLWFSPRH
Trigger: GTGACGAGGTGAGAACCAGAGCCTTGCGTTTCGGGACGGAGTGCACCCTTGGCTACTTGGACCTCCTGGAGCACGTCTTGGTGATTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp GGTGGCATGGACCACTTCCCCAGCAGACTGGTTCAGATCAGCTGCTaGCTGGTTCAGTTCACTCTGGGCTTCCTGGAAAGGCTTCGTGCT +
Preference number: 5 (lower is better)
Translates to: GGMDHFPSRLVQISC*LVQFTLGFLERLRA
Trigger: AGCACGAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGTGGTCCATGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TCGTTCAGCGTCACCATGATGTCATCCACGGCTTCCTTCATCAACTaGGCGGCCTCTGTGATGGCGTCATGGGTGTGTTGTGCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SFSVTMMSSTASFIN*AASVMASWVCCALG
Trigger: CCCCAAGGCACAACACACCCATGACGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGCCGTGGATGACATCATGGTGACGCTGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp GCTACCTGGTCTGGACCTGTGCTGTGCAGTGGTGGGGAAATAAACTaGGCTCTGGTTACTGGGCTGGGGTCTTCCAGAGTGGAGCTAAGC +
Preference number: 5 (lower is better)
Translates to: ATWSGPVLCSGGEIN*ALVTGLGSSRVELS
Trigger: GCTTAGCTCCACTCTGGAAGACCCCAGCCCAGTAACCAGAGCCCAGTTTATTTCCCCACCACTGCACAGCACAGGTCCAGACCAGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CCA 90 bp CCAACAGTTACCTGTGATGGGCTGCTGCCAGGGTCCACCAAGTTCTaGCATGCCATCTGGATGGCCTGGTTAGCCCTGGCAAACTGGATG +
Preference number: 5 (lower is better)
Translates to: PTVTCDGLLPGSTKF*HAIWMAWLALANWM
Trigger: CATCCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTAACTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp GCCGGCGACTCGCTTGGAGAAAGCGGCCAGCTGCTGCTTGAATTCTaGGGTTGGTTTCTGAAGAATCACCAAGACGTGCTCCAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: AGDSLGESGQLLLEF*GWFLKNHQDVLQEV
Trigger: GACCTCCTGGAGCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCTCTCCAGCATGGTCTaGGCTGAGACCAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRLSSMV*AETRIG
Trigger: ACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGAG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAAGTGATGAGACTCTaGATGGAGTCGGACACTGTA +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTREVMRL*MESDTV
Trigger: TACAGTGTCCGACTCCATCAAGAGTCTCATCACTTC...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGAAGTGATGAGACTCTaGATGGAGTCGGACACTGTA +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPEVMRL*MESDTV
Trigger: TACAGTGTCCGACTCCATCAAGAGTCTCATCACTTC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCTCTGTCCAGGGGCCTaGTCCCTGATAGAAGTGATG +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLALCPGA*SLIEVM
Trigger: CATCACTTCTATCAGGGACAAGGCCCCTGGACAGAG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGTCACCGCAATGGCTTaGGAGTATTTAACCACAGTC +
Preference number: 5 (lower is better)
Translates to: VPTGQRCENKHAGLQAHPVTAMA*EYLTTV
Trigger: GACTGTGGTTAAATACTCCAAAGCCATTGCGGTGAC...CGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGTTTCTGGCCCGGAGCTaGTTGGGTACACAGAGTGAT +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTFLARS*LGTQSD
Trigger: ATCACTCTGTGTACCCAACAAGCTCCGGGCCAGAAA...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGGCCTGCCTGGCTGTTaGGATCAGAGATGCCAACCA +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLGLPGC*DQRCQP
Trigger: TGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGCC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACTCTTGGCTACTGGGTaGGCCGTCTTGGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLLLATG*AVLDEA
Trigger: CGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAG...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATGGACGAAGTGCCTCTaGGCTACTGGGTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLWTKCL*ATGLAV
Trigger: GACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGGGTCGTCCACTGGCTaGCTGGCAGCTCCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: PIRACDHSEGTETSVGPKGSSTG*LAAPLV
Trigger: TACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGGGTCGTCCACTGGCTaGCTGGCAGCTCCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRGSSTG*LAAPLV
Trigger: TACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTAGGAGCGAGGTGACATaGGTCACCATCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLARSEVT*VTITLA
Trigger: TGCCAAGGTGATGGTGACCAATGTCACCTCGCTCCT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGCTTTCCGGCTCAGGTaGGCAGTAGCAATCACGTCC +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCAFRLR*AVAITS
Trigger: GGACGTGATTGCTACTGCCAACCTGAGCCGGAAAGC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATCGTCGTCATCAGCTTaGCCAAAAGCTGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGSSSSA*PKAAFW
Trigger: CCAGAAGGCAGCTTTTGGCAAAGCTGATGACGACGA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCACCTGAGCCAGTCTTaGTTGACGCTCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAHLSQS*LTLCIS
Trigger: GGAGATGCAGAGCGTCAACAAAGACTGGCTCAGGTG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGAAAGGCTTCGTGCTaGGAGGTAGCGAATCCACAA +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTGKASC*EVANPQ
Trigger: TTGTGGATTCGCTACCTCCAAGCACGAAGCCTTTCC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGAAAGGCTTCGTGCTaGGAGGTAGCGAATCCACAA +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHGKASC*EVANPQ
Trigger: TTGTGGATTCGCTACCTCCAAGCACGAAGCCTTTCC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCTTCTTTTGTCTGAGCTaGGCCAGCCATCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGFFCLS*ASHLNA
Trigger: GGCATTGAGATGGCTGGCCAAGCTCAGACAAAAGAA...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATCCAGTGTGAAGCTCTaGGGTGAGGCTGCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVSSVKL*GEAAQR
Trigger: GCGCTGGGCAGCCTCACCCAAGAGCTTCACACTGGA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGGCATGCTGCCAACGTaGAAGGTCTCAGGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: PALWRDRTRATTGTVVKIGMLPT*KVSGPL
Trigger: CAGCGGGCCTGAGACCTTCAACGTTGGCAGCATGCC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAAGATCCCCACTGGCTaGTCCGATGCTGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIKIPTG*SDAASS
Trigger: GCTGCTGGCAGCATCGGACAAGCCAGTGGGGATCTT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGAAAGGCCTTTGCATTaGGTTTGTCTCTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: RRDRDVRTSTQGSRLTREERPLH*VCLWRL
Trigger: AAGCCTCCAGAGACAAACCAAATGCAAAGGCCTTTC...CTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp TCCACTTCCTCCCTGACACAGTCACCTCCTTTCAGGAGGAATCCCTaGCCCCTGGTTGGCAACGTCTCACTGCACAGCCCATGCATTCCT +
Preference number: 5 (lower is better)
Translates to: STSSLTQSPPFRRNP*PLVGNVSLHSPCIP
Trigger: AGGAATGCATGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCCTGAAAGGAGGTGACTGTGTCAGGGAGGAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS TCA 90 bp TCACAGCGCCGGCGACTCGCTTGGAGAAAGCGGCCAGCTGCTGCTTaGATTCTGGGGTTGGTTTCTGAAGAATCACCAAGACGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SQRRRLAWRKRPAAA*ILGLVSEESPRRAP
Trigger: TGGAGCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp GCTCTGCATCTCCAGGTGCAATCAGGGCCTGCTTGGCCTCTTGAATaGGCATGGCGGAGCCCTCCATCACGTCTCGAGCAGAATCTAACA +
Preference number: 5 (lower is better)
Translates to: ALHLQVQSGPAWPLE*AWRSPPSRLEQNLT
Trigger: TGTTAGATTCTGCTCGAGACGTGATGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGCCCTGATTGCACCTGGAGATGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp TCCACCTGTTCTGCTTTGCTGAGGCTGGTAACACCCCTTTGGCCTTaGTGGATGGGTAAGGACTCCCAGATACACCAGCTCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: STCSALLRLVTPLWP*WMGKDSQIHQLLGL
Trigger: CAGCCCCAAGAGCTGGTGTATCTGGGAGTCCTTACCCATCCAGCAAGGCCAAAGGGGTGTTACCAGCCTCAGCAAAGCAGAACAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp GTCTTGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCGGCTGACAGGACCTACAAAGCATGG +
Preference number: 5 (lower is better)
Translates to: VLDEAMRQALHKADV*LATIVAADRTYKAW
Trigger: CCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp TTCCAGCGTTTCCCCTGGAAGTGGCTTCAGCTGGCTCTCCACGGCTaGCATCTTGGCATCCTGCAGTTCATTCTTAAGCGTCTGCACCGT +
Preference number: 5 (lower is better)
Translates to: FQRFPWKWLQLALHG*HLGILQFILKRLHR
Trigger: ACGGTGCAGACGCTTAAGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGAGAGCCAGCTGAAGCCACTTCCAGGGGAAACGCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp ACATATCAAGGTGCAACAGCTCCCTCCTCATCCATGGAGGGCTGCTaGCACCTACTGAGGTGTCTGGCTCAGGAAGTTCCACAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TYQGATAPSSSMEGC*HLLRCLAQEVPQAP
Trigger: TGGAGCCTGTGGAACTTCCTGAGCCAGACACCTCAGTAGGTGCCAGCAGCCCTCCATGGATGAGGAGGGAGCTGTTGCACCTTGATATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp TGCGGCAGGCATTGCACAAGGCTGACGTGTGCTTGGCAACAATTGTaGCGGCTGACAGGACCTACAAAGCATGGAGCTAGGTTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: CGRHCTRLTCAWQQL*RLTGPTKHGARLGV
Trigger: TACCCCCAACCTAGCTCCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp TGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTGACAGGACCTACAAAGCATGGAGCT +
Preference number: 5 (lower is better)
Translates to: WMRRCGRHCTRLTCA*QQLWRLTGPTKHGA
Trigger: AGCTCCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp AAGGCTTCGTGCTTGGAGGTAGCGAATCCACAAGCAGCTTCTTGCTaGACTCCCCGATGCTCTTCAAGGCCACGTCCACATCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: KASCLEVANPQAASC*TPRCSSRPRPHPSA
Trigger: GGCAGAAGGATGTGGACGTGGCCTTGAAGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGGATTCGCTACCTCCAAGCACGAAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp GCATGGACCACTTCCCCAGCAGACTGGTTCAGATCAGCTGCTGCCTaGTTCAGTTCACTCTGGGCTTCCTGGAAAGGCTTCGTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: AWTTSPADWFRSAAA*FSSLWASWKGFVLG
Trigger: TCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGTGGTCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp AAATCATCACTGAACTTTCCAGAGGCTGCAGCCAACTCTCCACTCTaGCCCCGGGTGGCATGGACCACTTCCCCAGCAGACTGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: KSSLNFPEAAANSPL*PRVAWTTSPADWFR
Trigger: TCTGAACCAGTCTGCTGGGGAAGTGGTCCATGCCACCCGGGGCCAGAGTGGAGAGTTGGCTGCAGCCTCTGGAAAGTTCAGTGATGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCTCTCCAGCATGGTCTaGGCTGAGACCAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLLSSMV*AETRIG
Trigger: ACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGAG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCAGGTGGGTGGGTCTTaGGGGTTGATGGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCQVGGS*GLMARE
Trigger: CTCTCTGGCCATCAACCCCAAAGACCCACCCACCTG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAAAAATAGCTTGCCAGTaGTGTCACCTTATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGKIACQ*CHLMSQ
Trigger: CTGGGACATAAGGTGACACAACTGGCAAGCTATTTT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGACTCTGCGAGAGTCTaGGTCTGGTCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVDSARV*VWSSTV
Trigger: GACGGTGCTGGACCAGACCAAGACTCTCGCAGAGTC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGACGACAAATGTTCCCTTaGGTTCTGGAGGAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGRQMFP*VLEECL
Trigger: AAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCG...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGAGCTCCCCCACAGTCTaGGAATCATCCACCATCACT +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGSSPTV*ESSTIT
Trigger: AGTGATGGTGGATGATTCCAAGACTGTGGGGGAGCT...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGEVPYH*DLVFFC
Trigger: ACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTC...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTCTCTGTCACAGCTCTaGCAGCTGCAGCCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFSLSQL*QLQPGD
Trigger: ATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGGAGGGAACAGGTTCATTAGGATaGTCCAACATCCCCTTCACA +
Preference number: 5 (lower is better)
Translates to: RDRDVRTSTQGSRLTREGTGSLG*SNIPFT
Trigger: TGTGAAGGGGATGTTGGACAATCCTAATGAACCTGT...TCCCTCCCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGAGCCCACAGAGAGCCTaGGATGCAATCCCCACACAT +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLSPQRA*DAIPTH
Trigger: ATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGCT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTGTGCTTGGCAACAATaGTGGCGGCTGACAGGACCT +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLCAWQQ*WRLTGP
Trigger: AGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAAGGCTGACGTGTGCTaGGCAACAATTGTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFKADVC*ATIVAA
Trigger: AGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGACTCTTGGCTACTGGGTaGGCCGTCTTGGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRLLATG*AVLDEA
Trigger: CGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAG...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGATGGTCTTCACCAGGTaGGCAGTGCTGTTGGCGACT +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLMVFTR*AVLLAT
Trigger: AGTCGCCAACAGCACTGCCAACCTGGTGAAGACCAT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGAAGGCCTTGGCCGTCTaGAGAATGTTCTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLKALAV*RMFSLW
Trigger: CCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCTCCAGGCTCACCCGGACATCTTTGATGGCATaGATCAAAACCACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: CRRDRDVRTSTQGSRLTRTSLMA*IKTTWV
Trigger: GACCCAGGTGGTTTTGATCAATGCCATCAAAGATGT...CCGGGTGAGCCTGGAGCCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGCCTTGGCCACATCTTaGATGGCATTGATCAAAACC +
Preference number: 5 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGALATS*MALIKT
Trigger: GGTTTTGATCAATGCCATCAAAGATGTGGCCAAGGC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGAGATCAGAAAGGGCCTaGGCCACATCTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTRSERA*ATSLMA
Trigger: TGCCATCAAAGATGTGGCCAAGGCCCTTTCTGATCT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTTGCTGGCAGCTCCCTaGGTAGCACTGATGAGATCA +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRLLAAP*VALMRS
Trigger: TGATCTCATCAGTGCTACCAAGGGAGCTGCCAGCAA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTTGGTCACCATCACCTaGGCAGCCCCCTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLVTIT*AAPLSW
Trigger: CCAGCTCAAGGGGGCTGCCAAGGTGATGGTGACCAA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGCGCCGGCGACTCGCTaGGAGAAAGCGGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSAPATR*EKAASC
Trigger: GCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCGGCGC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCAGGGTCTCATCCGCTaGTTTTGGTTTTGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTQGLIR*FWFCSW
Trigger: CCAAGAGCAAAACCAAAACAAGCGGATGAGACCCTG...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCAGGGTCTCATCCGCTaGTTTTGGTTTTGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHQGLIR*FWFCSW
Trigger: CCAAGAGCAAAACCAAAACAAGCGGATGAGACCCTG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCTGAGCCAGTCTTTGTaGACGCTCTGCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLSQSL*TLCISR
Trigger: CCTGGAGATGCAGAGCGTCAACAAAGACTGGCTCAG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCACCTGAGCCAGTCTTaGTTGACGCTCTGCATCTCC +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLHLSQS*LTLCIS
Trigger: GGAGATGCAGAGCGTCAACAAAGACTGGCTCAGGTG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCCGCATCACCGAGTCTTaGGTGATCCCCAGCAGGCGA +
Preference number: 5 (lower is better)
Translates to: PALWRDRTRATTGTVVKIRITES*VIPSRR
Trigger: TCGCCTGCTGGGGATCACCAAAGACTCGGTGATGCG...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCCTTCCCGGTCCGGTaGAACTGCTGCTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKAFPVR*NCCCKM
Trigger: CATCTTGCAGCAGCAGTTCAACCGGACCGGGAAGGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCGTGGGGCTCACAACCTaGGCACATGCCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PALWRDRTRATTGTVVKIVGLTT*AHATSW
Trigger: CCAGCTTGTGGCATGTGCCAAGGTTGTGAGCCCCAC...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAAGTCAGCTAAGAGTTTaGCTGCTGCCAGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGSQLRV*LLPGAS
Trigger: AGAAGCTCCTGGCAGCAGCAAAACTCTTAGCTGACT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGTTCAGGTTCCCCTTTaGGCCATCGGGAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAVQVPL*AIGNSN
Trigger: ATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAAC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp AGCTTTGCCAAAAGCTGCCTTCTGGGCTGCACGGACAAGATTGTCTaGGGCTCTTTTCACAGCATTTCCTGCCGCCCGCTCCAACAGGAG +
Preference number: 5 (lower is better)
Translates to: SFAKSCLLGCTDKIV*GSFHSISCRPLQQE
Trigger: CTCCTGTTGGAGCGGGCGGCAGGAAATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGGCAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494733.5
CDS GCA 90 bp GGGCTTGAAATCTTACATCCTCCCCAACAGTTACCTGTGATGGGCTaGTGCCAGGGTCCACCAAGTTCTGGCATGCCATCTGGATGGCCT +
Preference number: 5 (lower is better)
Translates to: GLEILHPPQQLPVMG*CQGPPSSGMPSGWP
Trigger: AGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTAACTGTTGGGGAGGATGTAAGATTTCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp ACCTGTTCTGCTTTGCTGAGGCTGGTAACACCCCTTTGGCCTTGCTaGATGGGTAAGGACTCCCAGATACACCAGCTCTTGGGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: TCSALLRLVTPLWPC*MGKDSQIHQLLGLL
Trigger: AAGCAGCCCCAAGAGCTGGTGTATCTGGGAGTCCTTACCCATCCAGCAAGGCCAAAGGGGTGTTACCAGCCTCAGCAAAGCAGAACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp CCAGCAGACTGGTTCAGATCAGCTGCTGCCTGGTTCAGTTCACTCTaGGCTTCCTGGAAAGGCTTCGTGCTTGGAGGTAGCGAATCCACA +
Preference number: 5 (lower is better)
Translates to: PADWFRSAAAWFSSL*ASWKGFVLGGSEST
Trigger: TGTGGATTCGCTACCTCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAGTCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp CTGGGTTGGCTGCAGCCCCCTTTGCAGCTTCCACCATGCGAGCAGTaGAGTCAGCTAAGAGTTTTGCTGCTGCCAGGAGCTTCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: LGWLQPPLQLPPCEQ*SQLRVLLLPGASLN
Trigger: ATTCAAAGAAGCTCCTGGCAGCAGCAAAACTCTTAGCTGACTCCACTGCTCGCATGGTGGAAGCTGCAAAGGGGGCTGCAGCCAACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATGGGTGTGTTGTGCCTaGGGGTTTCCGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRWVCCA*GFPPPS
Trigger: AGAAGGTGGCGGAAACCCCAAGGCACAACACACCCA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGGGCGTCATGGGTGTGTaGTGCCTTGGGGTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKGVMGV*CLGVSA
Trigger: GGCGGAAACCCCAAGGCACAACACACCCATGACGCC...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGGTGCCTTCATCCAGCTaGCTCATGGCTTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: AVPSLGMLKETGDRARDRVPSSS*LMASAM
Trigger: CATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCAC...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCGACAAATGTTCCCTTaGGTTCTGGAGGAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLARQMFP*VLEECL
Trigger: AAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGCAGCTAACAGCAGCTaGCTGGATGCCATCGAGATA +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFAANSS*LDAIEI
Trigger: TATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTGC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAAGGAGATTTTTCGCATaGGGAGCTCCTGGATCTACA +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGRRFFA*GAPGST
Trigger: TGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACAGGAGATTTTTCGCATaGGGAGCTCCTGGATCTACA +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHRRFFA*GAPGST
Trigger: TGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCT...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGATTCACCCAGAACCTaGGAGTTTTCCATCACACTC +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTDSPRT*EFSITL
Trigger: GAGTGTGATGGAAAACTCCAAGGTTCTGGGTGAATC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATGTGCTTGGCAACAATaGTGGCGGCTGACAGGACCT +
Preference number: 5 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQECAWQQ*WRLTGP
Trigger: AGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATGTGCTTGGCAACAATaGTGGCGGCTGACAGGACCT +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKICAWQQ*WRLTGP
Trigger: AGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGACTGTTGGCGACTTCCTaGGCTGACTGGACGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRLLATS*ADWTKC
Trigger: GCACTTCGTCCAGTCAGCCAAGGAAGTCGCCAACAG...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCACATGCCTGGGTTCCTTaGTTCCCGGCCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAHAWVP*FPAWRA
Trigger: GGCTCTCCAGGCCGGGAACAAAGGAACCCAGGCATG...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAAGGCCTTGGCCGTCTaGAGAATGTTCTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIKALAV*RMFSLW
Trigger: CCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGTCTTCTACCAAGGCCTaGGCCGTCTTGAGAATGTTC +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGSSTKA*AVLRMF
Trigger: GAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGA...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCCTGGCTGCCCCCAGCTaGACCACTTCTGCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGLAAPS*TTSASW
Trigger: CCAGCTCGCAGAAGTGGTCAAGCTGGGGGCAGCCAG...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATAAGGAGCGAGGTGACATaGGTCACCATCACCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIRSEVT*VTITLA
Trigger: TGCCAAGGTGATGGTGACCAATGTCACCTCGCTCCT...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATGGAAGGATGCTTGCTaGCAAGCCGTCAACATATCT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGWKDAC*QAVNIS
Trigger: AGATATGTTGACGGCTTGCAAGCAAGCATCCTTCCA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACCCGCTTGTTTTGGTTTaGCTCTTGGCTTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHPLVLV*LLASVA
Trigger: AGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCGG...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGCTGCACGGACAAGATaGTCTGAGGCTCTTTTCACA +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRAARTR*SEALFT
Trigger: TGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGGTTGTGGGTAGGACATaGTACCGTGTGACATCACGA +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGVVGRT*YRVTSR
Trigger: TCGTGATGTCACACGGTACAATGTCCTACCCACAAC...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGCAAGATGGGTCTGGGTaGTACAAGGAGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRQDGSG*YKELTH
Trigger: GTGTGTAAGCTCCTTGTACAACCCAGACCCATCTTG...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCGCAACTCTGCCCTTaGGACTACGGAGGAACAAAA +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPQLCP*DYGGTK
Trigger: TTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCCGCAACTCTGCCCTTaGGACTACGGAGGAACAAAA +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLPQLCP*DYGGTK
Trigger: TTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAACAGTGTTTTCAGAGCTaGGGCCGTCTCTCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQEQCFQS*GRLSSS
Trigger: GCTGCTAGAGAGACGGCCCAAGCTCTGAAAACACTG...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGATGGTCTTCACCACGTaGCAGTGGCGCACACAAATC +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLMVFTT*QWRTQI
Trigger: GATTTGTGTGCGCCACTGCAACGTGGTGAAGACCAT...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGCCTTTGCATTTGGTTaGTCTCTGGAGGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: ASAQDMEGGPESPSRSPHAFAFG*SLEAFL
Trigger: CAGAAAAGCCTCCAGAGACAAACCAAATGCAAAGGC...GTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGAAAGGCCTTTGCATTaGGTTTGTCTCTGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTERPLH*VCLWRL
Trigger: AAGCCTCCAGAGACAAACCAAATGCAAAGGCCTTTC...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp CATCTGGCCCTGGAAAGCCAGGTGCCCATAGTCACTGGTCATTTGTaGAGCCAGTCCTCCCAACTCCTCCGGGTTAGTAACCGACTTAGT +
Preference number: 5 (lower is better)
Translates to: HLALESQVPIVTGHL*SQSSQLLRVSNRLS
Trigger: ACTAAGTCGGTTACTAACCCGGAGGAGTTGGGAGGACTGGCTTCACAAATGACCAGTGACTATGGGCACCTGGCTTTCCAGGGCCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp AGTTCCACAGGCTCCACCCCGCCAGCCTCAACTCATTTGCTTTCCTaGATCCACCTGTTCTGCTTTGCTGAGGCTGGTAACACCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SSTGSTPPASTHLLS*IHLFCFAEAGNTPL
Trigger: CAAAGGGGTGTTACCAGCCTCAGCAAAGCAGAACAGGTGGATTCAGGAAAGCAAATGAGTTGAGGCTGGCGGGGTGGAGCCTGTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp ACGCTGTCAGGTTCTCCACAGCTTCAATCAAGGGTGCGGTGGCGATaGGACACTTATTGCGGTTGTCTTCAGAGAAATCCCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: TLSGSPQLQSRVRWR*DTYCGCLQRNPHPG
Trigger: CCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAACCTGACAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp CTTGAAATCTTACATCCTCCCCAACAGTTACCTGTGATGGGCTGCTaGCAGGGTCCACCAAGTTCTGGCATGCCATCTGGATGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LEILHPPQQLPVMGC*QGPPSSGMPSGWPG
Trigger: ACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTAACTGTTGGGGAGGATGTAAGATTTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp GCTCAGGAAGTTCCACAGGCTCCACCCCGCCAGCCTCAACTCATTTaGTTTCCTGAATCCACCTGTTCTGCTTTGCTGAGGCTGGTAACA +
Preference number: 5 (lower is better)
Translates to: AQEVPQAPPRQPQLI*FPESTCSALLRLVT
Trigger: TGTTACCAGCCTCAGCAAAGCAGAACAGGTGGATTCAGGAAAGCAAATGAGTTGAGGCTGGCGGGGTGGAGCCTGTGGAACTTCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp AATACATATCAAGGTGCAACAGCTCCCTCCTCATCCATGGAGGGCTaGTGGCACCTACTGAGGTGTCTGGCTCAGGAAGTTCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: NTYQGATAPSSSMEG*WHLLRCLAQEVPQA
Trigger: AGCCTGTGGAACTTCCTGAGCCAGACACCTCAGTAGGTGCCAGCAGCCCTCCATGGATGAGGAGGGAGCTGTTGCACCTTGATATGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp GGAAGTGGCTTCAGCTGGCTCTCCACGGCTGCCATCTTGGCATCCTaGAGTTCATTCTTAAGCGTCTGCACCGTATTCAGAGCTGAATCG +
Preference number: 5 (lower is better)
Translates to: GSGFSWLSTAAILAS*SSFLSVCTVFRAES
Trigger: CGATTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGAGAGCCAGCTGAAGCCACTTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp ATGCAATCCCCACACATTCCCCAAAGGCAGGGAGGTCTCCGGTCTTaGCATTCTGTGAAATCCCTGCCATCGATTCACCCAGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: MQSPHIPQRQGGLRS*HSVKSLPSIHPEPW
Trigger: CCAAGGTTCTGGGTGAATCGATGGCAGGGATTTCACAGAATGCCAAGACCGGAGACCTCCCTGCCTTTGGGGAATGTGTGGGGATTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp CCTGAATCCACCTGTTCTGCTTTGCTGAGGCTGGTAACACCCCTTTaGCCTTGCTGGATGGGTAAGGACTCCCAGATACACCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PESTCSALLRLVTPL*PCWMGKDSQIHQLL
Trigger: CAAGAGCTGGTGTATCTGGGAGTCCTTACCCATCCAGCAAGGCCAAAGGGGTGTTACCAGCCTCAGCAAAGCAGAACAGGTGGATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp TGGTTCAGATCAGCTGCTGCCTGGTTCAGTTCACTCTGGGCTTCCTaGAAAGGCTTCGTGCTTGGAGGTAGCGAATCCACAAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WFRSAAAWFSSLWAS*KGFVLGGSESTSSF
Trigger: GAAGCTGCTTGTGGATTCGCTACCTCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp GGCCACGAGAGGTCAGAAAGCCCAGTGAACACCCATGGCGGTGCATaGCTGAACGCACAGCAACATTCTCAATGGTCATCACTACAGGAT +
Preference number: 5 (lower is better)
Translates to: GHERSESPVNTHGGA*LNAQQHSQWSSLQD
Trigger: ATCCTGTAGTGATGACCATTGAGAATGTTGCTGTGCGTTCAGCCATGCACCGCCATGGGTGTTCACTGGGCTTTCTGACCTCTCGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559908.1
CDS CCA 90 bp GACGAAAGAAGGCCACGAGAGGTCAGAAAGCCCAGTGAACACCCATaGCGGTGCATGGCTGAACGCACAGCAACATTCTCAATGGTCATC +
Preference number: 5 (lower is better)
Translates to: DERRPREVRKPSEHP*RCMAERTATFSMVI
Trigger: GATGACCATTGAGAATGTTGCTGTGCGTTCAGCCATGCACCGCCATGGGTGTTCACTGGGCTTTCTGACCTCTCGTGGCCTTCTTTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559908.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCA +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLARHLLR*SSEKSP
Trigger: TGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCG...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGAAAATAGCTTGCCAGTaGTGTCACCTTATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTKIACQ*CHLMSQ
Trigger: CTGGGACATAAGGTGACACAACTGGCAAGCTATTTT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTTCCGCCACCTTCTTaGGCTGCATACAACATCTGC +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFFPPPS*AAYNIC
Trigger: GCAGATGTTGTATGCAGCCAAAGAAGGTGGCGGAAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTGGGTGTGTTGTGCCTaGGGGTTTCCGCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: TGDRARDRGPDRTLYTKSWVCCA*GFPPPS
Trigger: AGAAGGTGGCGGAAACCCCAAGGCACAACACACCCA...GGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGTGCCTTCATCCAGCTaGCTCATGGCTTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLVPSSS*LMASAM
Trigger: CATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCAC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTGTCACCGCAATGGCTTaGGAGTATTTAACCACAGTC +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAVTAMA*EYLTTV
Trigger: GACTGTGGTTAAATACTCCAAAGCCATTGCGGTGAC...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGGTCACCGCAATGGCTTaGGAGTATTTAACCACAGTC +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRVTAMA*EYLTTV
Trigger: GACTGTGGTTAAATACTCCAAAGCCATTGCGGTGAC...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGATGGCAGTCCCAAGCTaGGGCATGCTAAAAGAGACA +
Preference number: 5 (lower is better)
Translates to: AVPSLGMLKETGDRARDRMAVPS*GMLKET
Trigger: TGTCTCTTTTAGCATGCCCAAGCTTGGGACTGCCAT...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATCTTAGAAAGTGGCCTTaGGGGCCCAACTTTGGCTAC +
Preference number: 5 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHLRKWP*GPNFGY
Trigger: GTAGCCAAAGTTGGGCCCCAAAGGCCACTTTCTAAG...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGEVPYH*DLVFFC
Trigger: ACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTCTACAGAGAGAGACTaGGCAGCTAACAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLSTERD*AANSSL
Trigger: CAAGCTGCTGTTAGCTGCCAAGTCTCTCTCTGTAGA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAACACAGAGTGATGAGTaGATTGATGCTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGTQSDE*IDALCH
Trigger: GTGACAGAGAGCATCAATCAACTCATCACTCTGTGT...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGAGCCCACAGAGAGCCTaGGATGCAATCCCCACACAT +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKSPQRA*DAIPTH
Trigger: ATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGCT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAAAGGCTGACGTGTGCTaGGCAACAATTGTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: PIRACDHSEGTETSVGPKKADVC*ATIVAA
Trigger: AGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTT...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCATGGACGAAGTGCCTCTaGGCTACTGGGTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAWTKCL*ATGLAV
Trigger: GACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCA...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGATGGTCTTCACCAGGTaGGCAGTGCTGTTGGCGACT +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKMVFTR*AVLLAT
Trigger: AGTCGCCAACAGCACTGCCAACCTGGTGAAGACCAT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATTGCTGGCAGCTCCCTaGGTAGCACTGATGAGATCA +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLLLAAP*VALMRS
Trigger: TGATCTCATCAGTGCTACCAAGGGAGCTGCCAGCAA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCACCTTGGCAGCCCCCTaGAGCTGGTACATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: MACSPLLTCVWFLDEVLATLAAP*SWYMEG
Trigger: CCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGGT...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGCACGCAGGGCCGCTTGTTTTGGTTTaGCTCTTGGCTTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: TIMQPVPTGQRCENKHAGPLVLV*LLASVA
Trigger: AGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCGG...CCCTGCGTGCTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGATCTCATCCGCTTGTTTaGGTTTTGCTCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGSHPLV*VLLLAS
Trigger: TGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAGA...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCTGCTGAGGCCGATTaGACCAGGGCGCTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAAEAD*TRALVA
Trigger: TGCCACAAGCGCCCTGGTCAAATCGGCCTCAGCAGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCGTCGTCATCAGCTTaGCCAAAAGCTGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSSSSA*PKAAFW
Trigger: CCAGAAGGCAGCTTTTGGCAAAGCTGATGACGACGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGTTGTGGGTAGGACATaGTACCGTGTGACATCACGA +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLVVGRT*YRVTSR
Trigger: TCGTGATGTCACACGGTACAATGTCCTACCCACAAC...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGCAAGATGGGTCTGGGTaGTACAAGGAGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLQDGSG*YKELTH
Trigger: GTGTGTAAGCTCCTTGTACAACCCAGACCCATCTTG...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCAAGATGGGTCTGGGTaGTACAAGGAGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFQDGSG*YKELTH
Trigger: GTGTGTAAGCTCCTTGTACAACCCAGACCCATCTTG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATACCGCAACTCTGCCCTTaGGACTACGGAGGAACAAAA +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIPQLCP*DYGGTK
Trigger: TTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGG...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGTAGTGTTCGTTGCCTaGAGCAGCACAGGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVVVFVA*SSTGQQ
Trigger: CTGCTGACCTGTGCTGCTCAAGGCAACGAACACTAC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCAGTGTTTTCAGAGCTaGGGCCGTCTCTCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCQCFQS*GRLSSS
Trigger: GCTGCTAGAGAGACGGCCCAAGCTCTGAAAACACTG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCCTGAGCCAGTCTTTGTaGACGCTCTGCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PALWRDRTRATTGTVVKILSQSL*TLCISR
Trigger: CCTGGAGATGCAGAGCGTCAACAAAGACTGGCTCAG...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGTTCTTTTGTCTGAGCTaGGCCAGCCATCTCAATGCC +
Preference number: 5 (lower is better)
Translates to: MEGGPESPSRSPHGFVFLFFCLS*ASHLNA
Trigger: GGCATTGAGATGGCTGGCCAAGCTCAGACAAAAGAA...CAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTCAGCTCCTCTCTGCTaGATATATTCTTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRSAPLC*IYSLGR
Trigger: CCTGCCCAAAGAATATATCAAGCAGAGAGGAGCTGA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CGACTGCAGGGCCAACCAGGAATTGAGGAACCTGCCTGCACAGATGGCCAGGGCGCATTGGCAACAGCTTaGGCCAAACTCATTAAAACA +
Preference number: 5 (lower is better)
Translates to: RLQGQPGIEEPACTDGQGALATA*AKLIKT
Trigger: TGTTTTAATGAGTTTGGCCAAAGCTGTTGCCAATGC...GCCCTGGCCATCTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCTGCAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTAACATGGCAGCTGCATaGGCAACAGCTTTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCNMAAA*ATALAK
Trigger: TTTGGCCAAAGCTGTTGCCAATGCAGCTGCCATGTT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATCTGACCTCATGGCATaGACGAGGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQESDLMA*TRSDVA
Trigger: AGCCACATCAGACCTCGTCAATGCCATGAGGTCAGA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCTCCACGGCTGCCATCTaGGCATCCTGCAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: PALWRDRTRATTGTVVKISTAAI*ASCSSF
Trigger: GAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGA...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTCTGTGTTATTTTCCTTaGAAGGACCAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCLCYFP*KDQKAP
Trigger: GGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACAG...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTACTTGGGGATACCTTaGGGAAAGATGCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFYLGIP*GKMPSP
Trigger: TGGGGAAGGCATCTTTCCCAAAGGTATCCCCAAGTA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp CACTCTTTCTGGCCCGGAGCTTGTTGGGTACACAGAGTGATGAGTTaGTTGATGCTCTCTGTCACAGCTCTTGCAGCTGCAGCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HSFWPGACWVHRVMS*LMLSVTALAAAARR
Trigger: TCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGAGCATCAATCAACTCATCACTCTGTGTACCCAACAAGCTCCGGGCCAGAAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp CTGCTTAAGGGCTTGAAATCTTACATCCTCCCCAACAGTTACCTGTaGTGGGCTGCTGCCAGGGTCCACCAAGTTCTGGCATGCCATCTG +
Preference number: 5 (lower is better)
Translates to: LLKGLKSYILPNSYL*WAAARVHQVLACHL
Trigger: CAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTAACTGTTGGGGAGGATGTAAGATTTCAAGCCCTTAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp TCTCCACAGCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATTaGGGTTGTCTTCAGAGAAATCCCCATCCAGGGCAGCCAAGTCAA +
Preference number: 5 (lower is better)
Translates to: SPQLQSRVRWRCDTY*GCLQRNPHPGQPSQ
Trigger: TTGACTTGGCTGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS GCA 90 bp AGCATCGAGGAATTCATCAAAATCATCACTGAACTTTCCAGAGGCTaGAGCCAACTCTCCACTCTGGCCCCGGGTGGCATGGACCACTTC +
Preference number: 5 (lower is better)
Translates to: SIEEFIKIITELSRG*SQLSTLAPGGMDHF
Trigger: GAAGTGGTCCATGCCACCCGGGGCCAGAGTGGAGAGTTGGCTGCAGCCTCTGGAAAGTTCAGTGATGATTTTGATGAATTCCTCGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp AGAAGGCCACGAGAGGTCAGAAAGCCCAGTGAACACCCATGGCGGTaGATGGCTGAACGCACAGCAACATTCTCAATGGTCATCACTACA +
Preference number: 5 (lower is better)
Translates to: RRPREVRKPSEHPWR*MAERTATFSMVITT
Trigger: TGTAGTGATGACCATTGAGAATGTTGCTGTGCGTTCAGCCATGCACCGCCATGGGTGTTCACTGGGCTTTCTGACCTCTCGTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559908.1
CDS GCA 90 bp CATTCTCTCCAATCTGTCTCAGAAGATCCCCACTGGCTTGTCCGATaGTGCCAGCAGCAGTCAAAACTGTCTGTCGAGGCTCTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: HSLQSVSEDPHWLVR*CQQQSKLSVEALQK
Trigger: CTTCTGGAGAGCCTCGACAGACAGTTTTGACTGCTGCTGGCAGCATCGGACAAGCCAGTGGGGATCTTCTGAGACAGATTGGAGAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp AGGCGAACGCTGTCAGGTTCTCCACAGCTTCAATCAAGGGTGCGGTaGCGATGCGACACTTATTGCGGTTGTCTTCAGAGAAATCCCCAT +
Preference number: 5 (lower is better)
Translates to: RRTLSGSPQLQSRVR*RCDTYCGCLQRNPH
Trigger: ATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAACCTGACAGCGTTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCA +
Preference number: 5 (lower is better)
Translates to: AVPSLGMLKETGDRARDRRHLLR*SSEKSP
Trigger: TGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCG...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCA +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFRHLLR*SSEKSP
Trigger: TGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CAGGTGACAGGGCTAGGGACAGGGGACCTGATAGAACACTGTATACAAAGTCCTCTCTGTCCAGGGGCCTaGTCCCTGATAGAAGTGATG +
Preference number: 5 (lower is better)
Translates to: QVTGLGTGDLIEHCIQSPLCPGA*SLIEVM
Trigger: CATCACTTCTATCAGGGACAAGGCCCCTGGACAGAG...AGGACTTTGTATACAGTGTTCTATCAGGTCCCCTGTCCCTAGCCCTGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCAGGCGTCATGGGTGTGTaGTGCCTTGGGGTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKAGVMGV*CLGVSA
Trigger: GGCGGAAACCCCAAGGCACAACACACCCATGACGCC...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGTGCCTTCATCCAGCTaGCTCATGGCTTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: PIRACDHSEGTETSVGPKVPSSS*LMASAM
Trigger: CATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCAC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGCCCATGCCCCAGTTCTaGGCCAGTCTGCCCCATAAG +
Preference number: 5 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKPMPQF*ASLPHK
Trigger: CTTATGGGGCAGACTGGCCAAGAACTGGGGCATGGG...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGCCATCGAGATATTCTaGAGGTTCCCTATCACTTGG +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCAIEIF*RFPITW
Trigger: CCAAGTGATAGGGAACCTCAAGAATATCTCGATGGC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCTTTCTGGCCCGGAGCTaGTTGGGTACACAGAGTGAT +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCFLARS*LGTQSD
Trigger: ATCACTCTGTGTACCCAACAAGCTCCGGGCCAGAAA...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTACAGGTTCATTAGGATaGTCCAACATCCCCTTCACA +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLATGSLG*SNIPFT
Trigger: TGTGAAGGGGATGTTGGACAATCCTAATGAACCTGT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTGATTCACCCAGAACCTaGGAGTTTTCCATCACACTC +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFDSPRT*EFSITL
Trigger: GAGTGTGATGGAAAACTCCAAGGTTCTGGGTGAATC...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATCTTCTACCAAGGCCTaGGCCGTCTTGAGAATGTTC +
Preference number: 5 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQESSTKA*AVLRMF
Trigger: GAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAAGATCAGAAAGGGCCTaGGCCACATCTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLRSERA*ATSLMA
Trigger: TGCCATCAAAGATGTGGCCAAGGCCCTTTCTGATCT...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGCTTTATGCATTCAATaGTGGCCTCAAGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PIRACDHSEGTETSVGPKALCIQ*WPQAPW
Trigger: CCAGGGCGCTTGAGGCCACAATTGAATGCATAAAGC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTTTTGGTTTTGCTCTaGGCTTCAGTTGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: LGEPVLKTWKEDLSHPPGVLVLL*ASVALT
Trigger: AGTTAGAGCAACTGAAGCCAAGAGCAAAACCAAAAC...TCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGGCTCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTCCGCTTGTTTTGGTTTaGCTCTTGGCTTCAGTTGCT +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFPLVLV*LLASVA
Trigger: AGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCGG...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGGCGGGAATTTTTCACCCCCTGGGTGAGCCAGTGCTCAAGACATGGAAGGAGGTCTCATCCGCTTGTTTaGGTTTTGCTCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: GREFFTPWVSQCSRHGRRSHPLV*VLLLAS
Trigger: TGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAGA...CCTCCTTCCATGTCTTGAGCACTGGCTCACCCAGGGGGTGAAAAATTCCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGATCGTCGTCATCAGCTTaGCCAAAAGCTGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRSSSSA*PKAAFW
Trigger: CCAGAAGGCAGCTTTTGGCAAAGCTGATGACGACGA...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGAGAAGCTTGCCCAGTTaGTGCCTCAGGCACCCGTTC +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKRSLPS*CLRHPF
Trigger: GAACGGGTGCCTGAGGCACAAACTGGGCAAGCTTCT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTCCTCATTCTCTGGGTaGGCTGCAGCCCCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKSSFSG*AAAPFA
Trigger: TGCAAAGGGGGCTGCAGCCAACCCAGAGAATGAGGA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGTCTTCAGCTTGAGCTaGGCTCCCCCTCACTCCCTG +
Preference number: 5 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRVFSLS*APPHSL
Trigger: CAGGGAGTGAGGGGGAGCCAAGCTCAAGCTGAAGAC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CCAGTGCTCAAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGATAAAGGAAAGGCCTTaGCATTTGGTTTGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PVLKTWKEDLSHPPGVHTIKERP*HLVCLW
Trigger: CCAGAGACAAACCAAATGCAAAGGCCTTTCCTTTAT...CGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTTGAGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGATGAGGTTTTGGCCTaGGCATCACTTTGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRDEVLA*ASLWRW
Trigger: CCACCTCCAAAGTGATGCCAAGGCCAAAACCTCATC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CCAGCACTGTGGAGAGATAGGACCAGAGCCACTACTGGCACAGTTGTCAAGATCCCTGTGTCTGGTTCCTaGATGAGGTTTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PALWRDRTRATTGTVVKIPVSGS*MRFWPW
Trigger: CCAAGGCCAAAACCTCATCAAGGAACCAGACACAGG...GATCTTGACAACTGTGCCAGTAGTGGCTCTGGTCCTATCTCTCCACAGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp CACACATTCCCCAAAGGCAGGGAGGTCTCCGGTCTTGGCATTCTGTaGAATCCCTGCCATCGATTCACCCAGAACCTTGGAGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: HTFPKGREVSGLGIL*NPCHRFTQNLGVFH
Trigger: ATGGAAAACTCCAAGGTTCTGGGTGAATCGATGGCAGGGATTTCACAGAATGCCAAGACCGGAGACCTCCCTGCCTTTGGGGAATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp CAGCTTCGATGGATGCTGCAGCCCCCAGTAACTCTGTTTCTGCAATaGCAGTTGGGTCTTCTGGATCCACCCACTCTGTTCCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: QLRWMLQPPVTLFLQ*QLGLLDPPTLFLSW
Trigger: CCATGAAAGGAACAGAGTGGGTGGATCCAGAAGACCCAACTGTCATTGCAGAAACAGAGTTACTGGGGGCTGCAGCATCCATCGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp TCCAGGGTCTCATCCGCTTGTTTTGGTTTTGCTCTTGGCTTCAGTTaGTCTAACTTCTTAGCAGCAGCTTCGATGGATGCTGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: SRVSSACFGFALGFS*SNFLAAASMDAAAP
Trigger: GGGGGCTGCAGCATCCATCGAAGCTGCTGCTAAGAAGTTAGAGCAACTGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAGACCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TCTCTGTCACAGCTCTTGCAGCTGCAGCCAGGAGATTTTTCGCATTaGGAGCTCCTGGATCTACAGAGAGAGACTTGGCAGCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: SLSQLLQLQPGDFSH*ELLDLQRETWQLTA
Trigger: TGCTGTTAGCTGCCAAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp GCTCATCAGTCTCATTCTCTCCAATCTGTCTCAGAAGATCCCCACTaGCTTGTCCGATGCTGCCAGCAGCAGTCAAAACTGTCTGTCGAG +
Preference number: 5 (lower is better)
Translates to: AHQSHSLQSVSEDPH*LVRCCQQQSKLSVE
Trigger: CTCGACAGACAGTTTTGACTGCTGCTGGCAGCATCGGACAAGCCAGTGGGGATCTTCTGAGACAGATTGGAGAGAATGAGACTGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCCTCTCCAGCATGGTCTaGGCTGAGACCAGGATTGGT +
Preference number: 5 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGLSSMV*AETRIG
Trigger: ACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGAG...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCACAGGTGGGTGGGTCTTaGGGGTTGATGGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKAQVGGS*GLMARE
Trigger: CTCTCTGGCCATCAACCCCAAAGACCCACCCACCTG...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GTGGCCTTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATGAAGTGATGAGACTCTaGATGGAGTCGGACACTGTA +
Preference number: 5 (lower is better)
Translates to: VAFGAQLWLPLDSYGYRHEVMRL*MESDTV
Trigger: TACAGTGTCCGACTCCATCAAGAGTCTCATCACTTC...ATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GCAGTCCCAAGCTTGGGCATGCTAAAAGAGACAGGTGACAGGGCTAGGGACAGGAAAATAGCTTGCCAGTaGTGTCACCTTATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: AVPSLGMLKETGDRARDRKIACQ*CHLMSQ
Trigger: CTGGGACATAAGGTGACACAACTGGCAAGCTATTTT...CCTGTCCCTAGCCCTGTCACCTGTCTCTTTTAGCATGCCCAAGCTTGGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTAGGGCTCAAAATAGCTaGCCAGTTGTGTCACCTTAT +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCRAQNS*PVVSPY
Trigger: ATAAGGTGACACAACTGGCAAGCTATTTTGAGCCCT...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGGCAGACTCTGCGAGAGTCTaGGTCTGGTCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: ILKPSLHWPLRKAGLGKADSARV*VWSSTV
Trigger: GACGGTGCTGGACCAGACCAAGACTCTCGCAGAGTC...TGCCTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGACTCTGCGAGAGTCTaGGTCTGGTCCAGCACCGTC +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSDSARV*VWSSTV
Trigger: GACGGTGCTGGACCAGACCAAGACTCTCGCAGAGTC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACGACAAATGTTCCCTTaGGTTCTGGAGGAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVRQMFP*VLEECL
Trigger: AAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTCTCTGTCACAGCTCTaGCAGCTGCAGCCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKSLSQL*QLQPGD
Trigger: ATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTACACAGAGTGATGAGTaGATTGATGCTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFTQSDE*IDALCH
Trigger: GTGACAGAGAGCATCAATCAACTCATCACTCTGTGT...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGCCTTGGCCACATCTTaGATGGCATTGATCAAAACC +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLALATS*MALIKT
Trigger: GGTTTTGATCAATGCCATCAAAGATGTGGCCAAGGC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGAGATCAGAAAGGGCCTaGGCCACATCTTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKRSERA*ATSLMA
Trigger: TGCCATCAAAGATGTGGCCAAGGCCCTTTCTGATCT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCGGCCAGCTGCTGCTaGAATTCTGGGGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAASCC*NSGVGF
Trigger: GAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCGCTGCACGGACAAGATaGTCTGAGGCTCTTTTCACA +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCAARTR*SEALFT
Trigger: TGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGC...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGAGGCGGCAGAGGAGTaGTGGGTAGGACATTGTACC +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGEAAEE*WVGHCT
Trigger: GGTACAATGTCCTACCCACAACTCCTCTGCCGCCTC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTTTGACGTACTTGACCTaGGCTTCTATCTCACTCATC +
Preference number: 5 (lower is better)
Translates to: GGPESPSRSPHGFVFLAFLTYLT*ASISLI
Trigger: GATGAGTGAGATAGAAGCCAAGGTCAAGTACGTCAA...AAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ATGGCTTGCTCACCACTTTTGACCTGTGTCTGGTTCCTTGATGAGGTTTTGGCCAGGGACCGTGCGAGTTaGACGTACTTGACCTTGGCT +
Preference number: 5 (lower is better)
Translates to: MACSPLLTCVWFLDEVLARDRAS*TYLTLA
Trigger: AGCCAAGGTCAAGTACGTCAAACTCGCACGGTCCCT...GGCCAAAACCTCATCAAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCAGTGTCTTCGGCCACTaGGGCAACATTCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCSVFGH*GNILCL
Trigger: AAGGCAAAGAATGTTGCCCAAGTGGCCGAAGACACT...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTATAAAGGAAAGGCCTTaGCATTTGGTTTGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EGGPESPSRSPHGFVFLAIKERP*HLVCLW
Trigger: CCAGAGACAAACCAAATGCAAAGGCCTTTCCTTTAT...AGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTGTGTTATTTTCCTTaGAAGGACCAGAAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLCYFP*KDQKAP
Trigger: GGGGGCCTTCTGGTCCTTCAAAGGAAAATAACACAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGCCCCGACGGCCTTCCGCAACTCTGCCCTTTGGACTACGGAGGAACAAAATATTCCTTGATGAGGTTTaGGCCTTGGCATCACTTTGG +
Preference number: 5 (lower is better)
Translates to: KPRRPSATLPFGLRRNKIFLDEV*ALASLW
Trigger: CCAAAGTGATGCCAAGGCCAAAACCTCATCAAGGAA...TATTTTGTTCCTCCGTAGTCCAAAGGGCAGAGTTGCGGAAGGCCGTCGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAGCTTGCTCACCACTTTaGACCTGTGTCTGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRACSPL*TCVWFL
Trigger: AAGGAACCAGACACAGGTCAAAAGTGGTGAGCAAGC...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp GGCATCCTGCAGTTCATTCTTAAGCGTCTGCACCGTATTCAGAGCTaGATCGATTTCCATCGGACCACAAGCTTCATGGGCCTTCTGCGA +
Preference number: 5 (lower is better)
Translates to: GILQFILKRLHRIQS*IDFHRTTSFMGLLR
Trigger: TCGCAGAAGGCCCATGAAGCTTGTGGTCCGATGGAAATCGATTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGAACTGCAGGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp TCCACGGCTGCCATCTTGGCATCCTGCAGTTCATTCTTAAGCGTCTaGACCGTATTCAGAGCTGAATCGATTTCCATCGGACCACAAGCT +
Preference number: 5 (lower is better)
Translates to: STAAILASCSSFLSV*TVFRAESISIGPQA
Trigger: AGCTTGTGGTCCGATGGAAATCGATTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp TTTGGCCTTGCTGGATGGGTAAGGACTCCCAGATACACCAGCTCTTaGGGCTGCTTTAGGTCCACATGGTCCTTGTGTTTCCTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: FGLAGWVRTPRYTSS*GCFRSTWSLCFLLC
Trigger: ACAAAGAAGGAAACACAAGGACCATGTGGACCTAAAGCAGCCCCAAGAGCTGGTGTATCTGGGAGTCCTTACCCATCCAGCAAGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAGAAGTGATGAGACTCTaGATGGAGTCGGACACTGTA +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVEVMRL*MESDTV
Trigger: TACAGTGTCCGACTCCATCAAGAGTCTCATCACTTC...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAAGGGCTCAAAATAGCTaGCCAGTTGTGTCACCTTAT +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLRAQNS*PVVSPY
Trigger: ATAAGGTGACACAACTGGCAAGCTATTTTGAGCCCT...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAGGAAGCTCTTTATTCCAGCAGAATCCCCACCCTGGACGCTAAGGAGACGAAGGAGATTTTTCGCATaGGGAGCTCCTGGATCTACA +
Preference number: 5 (lower is better)
Translates to: LRKLFIPAESPPWTLRRRRRFFA*GAPGST
Trigger: TGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCT...TCGTCTCCTTAGCGTCCAGGGTGGGGATTCTGCTGGAATAAAGAGCTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCATTTCTGGCCCGGAGCTaGTTGGGTACACAGAGTGAT +
Preference number: 5 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAFLARS*LGTQSD
Trigger: ATCACTCTGTGTACCCAACAAGCTCCGGGCCAGAAA...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGGCCTTGGCCACATCTTaGATGGCATTGATCAAAACC +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKALATS*MALIKT
Trigger: GGTTTTGATCAATGCCATCAAAGATGTGGCCAAGGC...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTATGGAAGGATGCTTGCTaGCAAGCCGTCAACATATCT +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVWKDAC*QAVNIS
Trigger: AGATATGTTGACGGCTTGCAAGCAAGCATCCTTCCA...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AAGACATGGAAGGAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTGTTTTGGTTTTGCTCTaGGCTTCAGTTGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: KTWKEDLSHPPGVHTGLCVLVLL*ASVALT
Trigger: AGTTAGAGCAACTGAAGCCAAGAGCAAAACCAAAAC...ACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTCCTTCCATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTATCTCATCCGCTTGTTTaGGTTTTGCTCTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLSHPLV*VLLLAS
Trigger: TGAAGCCAAGAGCAAAACCAAAACAAGCGGATGAGA...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCCGCAGGGTTCTTGTaGGAAACAGCTGCATTCTGG +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAAGFL*ETAAFW
Trigger: CCAGAATGCAGCTGTTTCCAACAAGAACCCTGCGGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGGGCAGGCATGAGGTGTaGGATCAGCTCCACTCAAAG +
Preference number: 5 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRGRHEV*DQLHSK
Trigger: CTTTGAGTGGAGCTGATCCAACACCTCATGCCTGCC...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGTCTCAGAAGCAGCCAGCCCCTTGGTCAACAGAGGGTACCTTTCCTCCAGGAATCCAAATTTCTTGGGTaGGTAAGTCTCAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLRSSQPLGQQRVPFLQESKFLG*VSLRSS
Trigger: GCTGCTTCTGAGACTTACCAACCCAAGAAATTTGGA...TTCCTGGAGGAAAGGTACCCTCTGTTGACCAAGGGGCTGGCTGCTTCTGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp GACAGCCCCCTTGGAGAATTAATCACACCTTCCTTTGCACATCCCTaGCACTGTCATCGTGCCCTGGTCATTGCATTTTCCAAACTTTGC +
Preference number: 5 (lower is better)
Translates to: DSPLGELITPSFAHP*HCHRALVIAFSKLC
Trigger: GCAAAGTTTGGAAAATGCAATGACCAGGGCACGATGACAGTGCCAGGGATGTGCAAAGGAAGGTGTGATTAATTCTCCAAGGGGGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp GCAGCAGCAATTACCCTGTTCTGTAGGACAGTGTCTTCGGCCACTTaGGCAACATTCTTTGCCTTTAGTACCAACATGGCAGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: AAAITLFCRTVSSAT*ATFFAFSTNMAAAL
Trigger: CAATGCAGCTGCCATGTTGGTACTAAAGGCAAAGAATGTTGCCCAAGTGGCCGAAGACACTGTCCTACAGAACAGGGTAATTGCTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTAAAAATAGCTTGCCAGTaGTGTCACCTTATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVKIACQ*CHLMSQ
Trigger: CTGGGACATAAGGTGACACAACTGGCAAGCTATTTT...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCATTTCCGCCACCTTCTTaGGCTGCATACAACATCTGC +
Preference number: 5 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAFPPPS*AAYNIC
Trigger: GCAGATGTTGTATGCAGCCAAAGAAGGTGGCGGAAA...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CCAATCCGGGCTTGTGACCATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PIRACDHSEGTETSVGPKEVPYH*DLVFFC
Trigger: ACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTC...TTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATGGTCACAAGCCCGGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCACACAGAGTGATGAGTaGATTGATGCTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCTQSDE*IDALCH
Trigger: GTGACAGAGAGCATCAATCAACTCATCACTCTGTGT...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTAAGGCCTTGGCCGTCTaGAGAATGTTCTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSKALAV*RMFSLW
Trigger: CCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTT...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGTGACATCACGATCATGCAGCCAGTGCCGACGGGACAGAGATGTGAGAACAAGACATCTTTGATGGCATaGATCAAAACCACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: CDITIMQPVPTGQRCENKTSLMA*IKTTWV
Trigger: GACCCAGGTGGTTTTGATCAATGCCATCAAAGATGT...CTTGTTCTCACATCTCTGTCCCGTCGGCACTGGCTGCATGATCGTGATGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GAGGACCTGAGTCACCCTCCCGGAGTCCACACGGGTTTGTGTTTCTGGCTTTTAGAATGGATTTCGTGTTaGGATTCGTCGACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: EDLSHPPGVHTGLCFWLLEWISC*DSSTLF
Trigger: GAACAAAGTCGACGAATCCAAACACGAAATCCATTC...TAAAAGCCAGAAACACAAACCCGTGTGGACTCCGGGAGGGTGACTCAGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTTGGGCAACATTCTTaGCCTTTAGTACCAACATGG +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLGQHS*PLVPTW
Trigger: CCATGTTGGTACTAAAGGCAAAGAATGTTGCCCAAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp GGAGTTGTGGGTAGGACATTGTACCGTGTGACATCACGATCATGCAGCCAGTGCCTGCCAGGAGCTTCTTaGAATTCTCCATGTCGATTT +
Preference number: 5 (lower is better)
Translates to: GVVGRTLYRVTSRSCSQCLPGAS*NSPCRF
Trigger: AAATCGACATGGAGAATTCAAAGAAGCTCCTGGCAG...GCACTGGCTGCATGATCGTGATGTCACACGGTACAATGTCCTACCCACAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGTTCAGGTTCCCCTTTaGGCCATCGGGAACAGCAAT +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGVQVPL*AIGNSN
Trigger: ATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAAC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TTTCCTTTGAAGGACCAGAAGGCCCCCTCAGTACCATCTGAGGACACCGCAGTACCACTACTGGCACAGTaGTCAAGATCTTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: FPLKDQKAPSVPSEDTAVPLLAQ*SRSFAF
Trigger: GAAAGCAAAAGATCTTGACAACTGTGCCAGTAGTGG...TACTGCGGTGTCCTCAGATGGTACTGAGGGGGCCTTCTGGTCCTTCAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp GCCTGCAATCAGCTGGGATATCTGCTCTCCCTCGGTGGTTTGTACTaGATAGTAGCTTTCCTGATACTCCCCAAAATCCAGTGTGAAGCT +
Preference number: 5 (lower is better)
Translates to: ACNQLGYLLSLGGLY*IVAFLILPKIQCEA
Trigger: AGCTTCACACTGGATTTTGGGGAGTATCAGGAAAGCTACTATTCAGTACAAACCACCGAGGGAGAGCAGATATCCCAGCTGATTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp GGAGTATTTAACCACAGTCGTCTGATAGTCGACAAATGTTCCCTTTaGTTCTGGAGGAGTGCCTTCATCCAGCTTGCTCATGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GVFNHSRLIVDKCSL*FWRSAFIQLAHGFC
Trigger: GCAGAAGCCATGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCGACTATCAGACGACTGTGGTTAAATACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 90 bp AGCTTGCTGGATGCCATCGAGATATTCTTGAGGTTCCCTATCACTTaGATCTGGTCTTCTTTTGTCTGGAAGGTCAAAAGGAGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: SLLDAIEIFLRFPIT*IWSSFVWKVKRSRS
Trigger: GCTCCGGCTCCTTTTGACCTTCCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS-3UTR CAA 90 bp GAGTCCACAGGAGGTATGTCTGGGCTAATTCTTAGCCACCCAGAATATTCAGGCGCGATGCGACACTTATaGCGGTTGTCTTCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: ESTGGMSGLILSHPEYSGAMRHL*RLSSEK
Trigger: TTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGC...GCCTGAATATTCTGGGTGGCTAAGAATTAGCCCAGACATACCTCCTGTGGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp TTTGGGGCCCAACTTTGGCTACCGTTAGACTCTTACGGGTACAGGCATTCTAAATTTCCGCCACCTTCTTaGGCTGCATACAACATCTGC +
Preference number: 5 (lower is better)
Translates to: FGAQLWLPLDSYGYRHSKFPPPS*AAYNIC
Trigger: GCAGATGTTGTATGCAGCCAAAGAAGGTGGCGGAAA...TTTAGAATGCCTGTACCCGTAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGTGCCTTCATCCAGCTaGCTCATGGCTTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSVPSSS*LMASAM
Trigger: CATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCAC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTCGACAAATGTTCCCTTaGGTTCTGGAGGAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: HTDIDATKLLGATHDLCPRQMFP*VLEECL
Trigger: AAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCG...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp GGCATTCTAAAGCCAAGTCTACACTGGCCACTAAGGAAAGCTGGTCTAGGAAAGCTTTGGGGCCCAACTTaGGCTACCGTTAGACTCTTA +
Preference number: 5 (lower is better)
Translates to: GILKPSLHWPLRKAGLGKLWGPT*ATVRLL
Trigger: TAAGAGTCTAACGGTAGCCAAAGTTGGGCCCCAAAG...CTTTCCTAGACCAGCTTTCCTTAGTGGCCAGTGTAGACTTGGCTTTAGAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTCTACAGAGAGAGACTaGGCAGCTAACAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGSTERD*AANSSL
Trigger: CAAGCTGCTGTTAGCTGCCAAGTCTCTCTCTGTAGA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCGCTGCACGGACAAGATaGTCTGAGGCTCTTTTCACA +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGAARTR*SEALFT
Trigger: TGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGC...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGGAAAGGCTTCGTGCTaGGAGGTAGCGAATCCACAA +
Preference number: 5 (lower is better)
Translates to: TFPRQWNFETIVWMESKTGKASC*EVANPQ
Trigger: TTGTGGATTCGCTACCTCCAAGCACGAAGCCTTTCC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGGATCTGGTCTTCTTTaGTCTGAGCTTGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: TFPRQWNFETIVWMESKTGSGLL*SELGQP
Trigger: TGGCTGGCCAAGCTCAGACAAAAGAAGACCAGATCC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CTGAAATCCAGTTCAGGTTCCCCTTTTGGCCATCGGGAACAGCAATTTCTGGCAGCCTTTGCATTTGGTTaGTCTCTGGAGGCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LKSSSGSPFGHREQQFLAAFAFG*SLEAFL
Trigger: CAGAAAAGCCTCCAGAGACAAACCAAATGCAAAGGC...TGCCAGAAATTGCTGTTCCCGATGGCCAAAAGGGGAACCTGAACTGGATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp CTCCTTTCAGGAGGAATCCCTGACCCCTGGTTGGCAACGTCTCACTaGACAGCCCATGCATTCCTTAATTTAACACTTCAGATAACTCTA +
Preference number: 5 (lower is better)
Translates to: LLSGGIPDPWLATSH*TAHAFLNLTLQITL
Trigger: TAGAGTTATCTGAAGTGTTAAATTAAGGAATGCATGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCCTGAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS GCA 90 bp ATTCCAAAATATCCCCATTCCGCAACATGTAGTAATCCAGTGTTCTaGCCGCTTCCAGCCAAATCCCTTTCCTCGGGTCTTCATCCGAAA +
Preference number: 5 (lower is better)
Translates to: IPKYPHSATCSNPVF*PLPAKSLSSGLHPK
Trigger: TTTCGGATGAAGACCCGAGGAAAGGGATTTGGCTGGAAGCGGGCAGAACACTGGATTACTACATGTTGCGGAATGGGGATATTTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474847.2
ENST00000561311.5
CDS CCA 90 bp TTCACTACAACATCGTCGTCATCAGCTTTGCCAAAAGCTGCCTTCTaGGCTGCACGGACAAGATTGTCTGAGGCTCTTTTCACAGCATTT +
Preference number: 5 (lower is better)
Translates to: FTTTSSSSALPKAAF*AARTRLSEALFTAF
Trigger: AAATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGGCAAAGCTGATGACGACGATGTTGTAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTGTCACCGCAATGGCTTaGGAGTATTTAACCACAGTC +
Preference number: 5 (lower is better)
Translates to: HTDIDATKLLGATHDLCPVTAMA*EYLTTV
Trigger: GACTGTGGTTAAATACTCCAAAGCCATTGCGGTGAC...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGTTGGTCACCATCACCTaGGCAGCCCCCTTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKLVTIT*AAPLSW
Trigger: CCAGCTCAAGGGGGCTGCCAAGGTGATGGTGACCAA...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGGCACCAGCTTGTTCTaGCCTTTCATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSGTSLF*PFIFSF
Trigger: GAAGGAGAAGATGAAAGGCAAGAACAAGCTGGTGCC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGAGATGGTGGACTTTTTaGGGGAAACGGACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKRWWTF*GKRTLL
Trigger: TAGAAGAGTCCGTTTCCCCAAAAAAGTCCACCATCT...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 90 bp TGTCAATGTAGCCTGCAATCAGCTGGGATATCTGCTCTCCCTCGGTaGTTTGTACTGAATAGTAGCTTTCCTGATACTCCCCAAAATCCA +
Preference number: 5 (lower is better)
Translates to: CQCSLQSAGISALPR*FVLNSSFPDTPQNP
Trigger: TGGATTTTGGGGAGTATCAGGAAAGCTACTATTCAGTACAAACCACCGAGGGAGAGCAGATATCCCAGCTGATTGCAGGCTACATTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp CACACTGATATAGATGCTACAAAGCTCCTTGGAGCCACACATGACCTGTGTCCTAGGGCTCAAAATAGCTaGCCAGTTGTGTCACCTTAT +
Preference number: 5 (lower is better)
Translates to: HTDIDATKLLGATHDLCPRAQNS*PVVSPY
Trigger: ATAAGGTGACACAACTGGCAAGCTATTTTGAGCCCT...AGGACACAGGTCATGTGTGGCTCCAAGGAGCTTTGTAGCATCTATATCAGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACATCATCTGTGTGCAGCTaGGCCTTCAACTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: TFPRQWNFETIVWMESKTSSVCS*AFNFSI
Trigger: AATGGAGAAGTTGAAGGCCAAGCTGCACACAGATGA...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGCCATCGAGATATTCTaGAGGTTCCCTATCACTTGG +
Preference number: 5 (lower is better)
Translates to: TFPRQWNFETIVWMESKTAIEIF*RFPITW
Trigger: CCAAGTGATAGGGAACCTCAAGAATATCTCGATGGC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TGGCTAAAGGTGCAGATTAAGGGTAAATTCAAGCCCTTCCCTTCCTATGGGAGGACAGGTTCATTAGGATaGTCCAACATCCCCTTCACA +
Preference number: 5 (lower is better)
Translates to: WLKVQIKGKFKPFPSYGRTGSLG*SNIPFT
Trigger: TGTGAAGGGGATGTTGGACAATCCTAATGAACCTGT...CCTCCCATAGGAAGGGAAGGGCTTGAATTTACCCTTAATCTGCACCTTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAGATTCACCCAGAACCTaGGAGTTTTCCATCACACTC +
Preference number: 5 (lower is better)
Translates to: TFPRQWNFETIVWMESKTDSPRT*EFSITL
Trigger: GAGTGTGATGGAAAACTCCAAGGTTCTGGGTGAATC...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGGGCCTGCCTGGCTGTTaGGATCAGAGATGCCAACCA +
Preference number: 5 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKGLPGC*DQRCQP
Trigger: TGGTTGGCATCTCTGATCCAAACAGCCAGGCAGGCC...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp CATTCTGAAGGCACAGAAACCAGCGTGGGACCTAAAGATGAGTCACTGAGGAAGTACACATACTCTCACTaGCTTTTCCTTTACAGCGTC +
Preference number: 5 (lower is better)
Translates to: HSEGTETSVGPKDESLRKYTYSH*LFLYSV
Trigger: GACGCTGTAAAGGAAAAGCAAGTGAGAGTATGTGTA...CTTCCTCAGTGACTCATCTTTAGGTCCCACGCTGGTTTCTGTGCCTTCAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGAGGGCCAACCAGGAATaGAGGAACCTGCCTGCACAG +
Preference number: 5 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKRANQE*RNLPAQ
Trigger: CTGTGCAGGCAGGTTCCTCAATTCCTGGTTGGCCCT...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp CTTATTTCTGGTGGAAAGAATATGGTCCTGCCCTCCACCTTAGGCTaGTACCAGGCAACTGCAAAGGAAGCAATTTGGACTTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: LISGGKNMVLPSTLG*YQATAKEAIWTWIF
Trigger: GAAAATCCAAGTCCAAATTGCTTCCTTTGCAGTTGCCTGGTATCAGCCTAAGGTGGAGGGCAGGACCATATTCTTTCCACCAGAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS-3UTR CAA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATCTCTGTCACAGCTCTaGCAGCTGCAGCCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLSLSQL*QLQPGD
Trigger: ATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATCCACGGCTGCCATCTaGGCATCCTGCAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLSTAAI*ASCSSF
Trigger: GAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp AGACAAGGCATGGCCCTTCAACTATCTTATGAAATGAGAAACCACCACACCGGCTACACATACTCTCACTaGCTTTTCCTTTACAGCGTC +
Preference number: 5 (lower is better)
Translates to: RQGMALQLSYEMRNHHTGYTYSH*LFLYSV
Trigger: GACGCTGTAAAGGAAAAGCAAGTGAGAGTATGTGTA...GCCGGTGTGGTGGTTTCTCATTTCATAAGATAGTTGAAGGGCCATGCCTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp AAAGAATATGGTCCTGCCCTCCACCTTAGGCTGATACCAGGCAACTaGAAAGGAAGCAATTTGGACTTGGATTTTCTATTCACTGGCTTA +
Preference number: 5 (lower is better)
Translates to: KEYGPALHLRLIPGN*KGSNLDLDFLFTGL
Trigger: TAAGCCAGTGAATAGAAAATCCAAGTCCAAATTGCTTCCTTTGCAGTTGCCTGGTATCAGCCTAAGGTGGAGGGCAGGACCATATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS GCA 90 bp AGAATTAATCACACCTTCCTTTGCACATCCCTGGCACTGTCATCGTaGCCTGGTCATTGCATTTTCCAAACTTTGCCTAACACACTAAGA +
Preference number: 5 (lower is better)
Translates to: RINHTFLCTSLALSS*PGHCIFQTLPNTLR
Trigger: TCTTAGTGTGTTAGGCAAAGTTTGGAAAATGCAATGACCAGGGCACGATGACAGTGCCAGGGATGTGCAAAGGAAGGTGTGATTAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 90 bp TCTTTGCCTTTAGTACCAACATGGCAGCTGCATTGGCAACAGCTTTaGCCAAACTCATTAAAACATCCTGGAATCGCTCATCAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: SLPLVPTWQLHWQQL*PNSLKHPGIAHQSH
Trigger: ATGAGACTGATGAGCGATTCCAGGATGTTTTAATGAGTTTGGCCAAAGCTGTTGCCAATGCAGCTGCCATGTTGGTACTAAAGGCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTGTTTTGGTTTTGCTCTaGGCTTCAGTTGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSVLVLL*ASVALT
Trigger: AGTTAGAGCAACTGAAGCCAAGAGCAAAACCAAAAC...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTATCCATAGTCAGAAGCTaGCCCAGTTTGTGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLSIVRS*PSLCLR
Trigger: CCTGAGGCACAAACTGGGCAAGCTTCTGACTATGGA...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS-3UTR CAA 90 bp ACTTTCCCCCGTCAGTGGAACTTTGAAACTATAGTGTGGATGGAGTCCAAGACAAGTTGTCAAGATCTTTaGCTTTCTGAACTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TFPRQWNFETIVWMESKTSCQDL*LSELWG
Trigger: TCCCCAGAGTTCAGAAAGCAAAAGATCTTGACAACT...TGTCTTGGACTCCATCCACACTATAGTTTCAAAGTTCCACTGACGGGGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp TTACAGCTAAGCACAGAACAAGCCCTCAATTCACGTCCCCTGAAATaGATGAAGACTCCTTGTCAATCTCACTGTGATTACTTCACTCCT +
Preference number: 5 (lower is better)
Translates to: LQLSTEQALNSRPLK*MKTPCQSHCDYFTP
Trigger: AGGAGTGAAGTAATCACAGTGAGATTGACAAGGAGTCTTCATTCATTTCAGGGGACGTGAATTGAGGGCTTGTTCTGTGCTTAGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS-3UTR CAA 90 bp ATCATAAAGAGGTCCAGGAGCAGGCCTAAGAGAAGGACCAACAAAAGCCAAAGTCGTGATAGCATCAACTaGAGAATGGATTTCGTGTTT +
Preference number: 5 (lower is better)
Translates to: IIKRSRSRPKRRTNKSQSRDSIN*RMDFVF
Trigger: AAACACGAAATCCATTCTCAAGTTGATGCTATCACG...ACTTTGGCTTTTGTTGGTCCTTCTCTTAGGCCTGCTCCTGGACCTCTTTATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 90 bp GCAGACTTTCTTAAATTCTCAGTTTCTATTAAGAGCGTATTTCCCTaGAGATATCCCAAAGCATGTGAGAAGCCTCCTGCAGCACTCAGT +
Preference number: 5 (lower is better)
Translates to: ADFLKFSVSIKSVFP*RYPKACEKPPAALS
Trigger: ACTGAGTGCTGCAGGAGGCTTCTCACATGCTTTGGGATATCTTCAGGGAAATACGCTCTTAATAGAAACTGAGAATTTAAGAAAGTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561197.5
CDS-3UTR CAA 90 bp TCTGAAAGTTCACACTCCCAAATGAACTCATGCCTGTGTTATTTTCCTTTGAAGCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCA +
Preference number: 5 (lower is better)
Translates to: SESSHSQMNSCLCYFPLKRHLLR*SSEKSP
Trigger: TGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCG...CTTCAAAGGAAAATAACACAGGCATGAGTTCATTTGGGAGTGTGAACTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS TCA 90 bp GCAGACTTTCTTAAATTCTCAGTTTCTATTAAGAGCGTATTTCCCTaGAGATATCCCAAAGCATGTGAGAAGCCTCCTGCAGCACCTAAA +
Preference number: 5 (lower is better)
Translates to: ADFLKFSVSIKSVFP*RYPKACEKPPAAPK
Trigger: TTTAGGTGCTGCAGGAGGCTTCTCACATGCTTTGGGATATCTTCAGGGAAATACGCTCTTAATAGAAACTGAGAATTTAAGAAAGTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636159.1
CDS-3UTR CAA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAAGGGCTCAAAATAGCTaGCCAGTTGTGTCACCTTAT +
Preference number: 5 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLRAQNS*PVVSPY
Trigger: ATAAGGTGACACAACTGGCAAGCTATTTTGAGCCCT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS-3UTR CAA 90 bp GCATTTGGTTTGTCTCTGGAGGCTTTTCTGGTATCAAATGCAGTAAAGGTTTTAACATCTTTGATGGCATaGATCAAAACCACCTGGGTC +
Preference number: 5 (lower is better)
Translates to: AFGLSLEAFLVSNAVKVLTSLMA*IKTTWV
Trigger: GACCCAGGTGGTTTTGATCAATGCCATCAAAGATGT...TAAAACCTTTACTGCATTTGATACCAGAAAAGCCTCCAGAGACAAACCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS GCA 90 bp CACCCCATTTCAAGGCACTTACAAATTTCCAGATTCATCATATTTTaGAATATTTGCTCCCACCTGAGTCATTATCTACAATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: HPISRHLQISRFIIF*NICSHLSHYLQCWH
Trigger: ATGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCAAAATATGATGAATCTGGAAATTTGTAAGTGCCTTGAAATGGGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp ATCATATTTTGCAATATTTGCTCCCACCTGAGTCATTATCTACAATaGTGGCATTTAGCTACCTTTGCAAGCTCTGAAAGAACAAGATTC +
Preference number: 5 (lower is better)
Translates to: IIFCNICSHLSHYLQ*WHLATFASSERTRF
Trigger: GAATCTTGTTCTTTCAGAGCTTGCAAAGGTAGCTAAATGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCAAAATATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 90 bp TCAAGGCACTTACAAATTTCCAGATTCATCATATTTTGCAATATTTaGTCCCACCTGAGTCATTATCTACAATGCTGGCATTTAGCTACC +
Preference number: 5 (lower is better)
Translates to: SRHLQISRFIIFCNI*SHLSHYLQCWHLAT
Trigger: GGTAGCTAAATGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCAAAATATGATGAATCTGGAAATTTGTAAGTGCCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS TCA 72 bp CCACAGAGATGTCGTCCCTCGTGGCCAGGCTCTGGCTaGCGGCGGCCAGCGAGGCCTGCTCGATGTCCCGGA +
Preference number: 6 (lower is better)
Translates to: PQRCRPSWPGSG*RRPARPARCPG
Trigger: TCCGGGACATCGAGCAGGCCTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCACGAGGGACGACATCTCTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000467297.1
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GTGGCCAGGCTCTGGCTGACGGCGGCCAGCGAGGCCTaGTCGATGTCCCGGATGCACCGGTTGATGCCATCG +
Preference number: 6 (lower is better)
Translates to: VARLWLTAASEA*SMSRMHRLMPS
Trigger: CGATGGCATCAACCGGTGCATCCGGGACATCGAGCAGGCCTCGCTGGCCGCCGTCAGCCAGAGCCTGGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000467297.1
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp CAGAATCTAACATGGCATGGGCGGCCGCGGGGTCGGTaGTCGATGCAGCCACTCCACGGGCGGCCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: QNLTWHGRPRGR*SMQPLHGRPGP
Trigger: TGGCCCAGGCCGCCCGTGGAGTGGCTGCATCGACAACCGACCCCGCGGCCGCCCATGCCATGTTAGATTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp TGCAGCAGCGCACGGGGGATGCATTTACTGTCTCATTaGAGAGCGCCTGCCCGGGAGTGCAGCCCGCGTCCC +
Preference number: 6 (lower is better)
Translates to: CSSARGMHLLSH*RAPARECSPRP
Trigger: GGGACGCGGGCTGCACTCCCGGGCAGGCGCTCTGCAATGAGACAGTAAATGCATCCCCCGTGCGCTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561322.1
CDS GCA 72 bp CCGATGGGCTCGCCTCGGCTGGCAAACTGCCGCACATaGTGCAGGAGATCATGGAGGGCCTGGCTGACCACG +
Preference number: 6 (lower is better)
Translates to: PMGSPRLANCRT*CRRSWRAWLTT
Trigger: CGTGGTCAGCCAGGCCCTCCATGATCTCCTGCAGCATGTGCGGCAGTTTGCCAGCCGAGGCGAGCCCATCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp GCTTCTCCTCGCTGGCGTGTCCCTGAACGGAGGCATTaGCCGCCTCACAGAGACTGCTGGTCGCAGCCGCCA +
Preference number: 6 (lower is better)
Translates to: ASPRWRVPERRH*PPHRDCWSQPP
Trigger: TGGCGGCTGCGACCAGCAGTCTCTGTGAGGCGGCCAATGCCTCCGTTCAGGGACACGCCAGCGAGGAGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp CTGCAGCAGCGCACGGGGGATGCATTTACTGTCTCATaGCAGAGCGCCTGCCCGGGAGTGCAGCCCGCGTCC +
Preference number: 6 (lower is better)
Translates to: LQQRTGDAFTVS*QSACPGVQPAS
Trigger: GGACGCGGGCTGCACTCCCGGGCAGGCGCTCTGCAATGAGACAGTAAATGCATCCCCCGTGCGCTGCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561322.1
CDS TCA 72 bp AGTCTGACACCGCCCCAGCGAGGGTCCTGGCAGCTCTaGGCAAGTCCTCCCCGCTGCCCACCTCATCATCCA +
Preference number: 6 (lower is better)
Translates to: SLTPPQRGSWQL*ASPPRCPPHHP
Trigger: TGGATGATGAGGTGGGCAGCGGGGAGGACTTGCTCAGAGCTGCCAGGACCCTCGCTGGGGCGGTGTCAGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp GGTGTAGCTGTCTGTGGGGCAGACCTGGAGGGCCCCTaGCTTCTGCACCAGGAAGATACAGCCGTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GVAVCGADLEGP*LLHQEDTAVAQ
Trigger: CTGGGCCACGGCTGTATCTTCCTGGTGCAGAAGGCAGGGGCCCTCCAGGTCTGCCCCACAGACAGCTACACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GCCTCATGGCCTCTGAATCCTGGTCGGCCTTCACCTTaGAGGCCACCAGCAGCTGAGCCGTGGAAGCGGCGA +
Preference number: 6 (lower is better)
Translates to: ASWPLNPGRPSP*RPPAAEPWKRR
Trigger: TCGCCGCTTCCACGGCTCAGCTGCTGGTGGCCTGCAAGGTGAAGGCCGACCAGGATTCAGAGGCCATGAGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp TGCTGGGCTGAGGTCAGTGGCGGCATGTGGCCTCGGTaGATCTGCCCAACCATGACCTGCTGCTGTGGCGAG +
Preference number: 6 (lower is better)
Translates to: CWAEVSGGMWPR*ICPTMTCCCGE
Trigger: CTCGCCACAGCAGCAGGTCATGGTTGGGCAGATGCACCGAGGCCACATGCCGCCACTGACCTCAGCCCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp ACTTCTGCGAGCTGGGTGATGGTGGCTGCTGAGGACTaGGCCGCCTGGGCCAGCTTGTCAGGAGTGGACGCA +
Preference number: 6 (lower is better)
Translates to: TSASWVMVAAED*AAWASLSGVDA
Trigger: TGCGTCCACTCCTGACAAGCTGGCCCAGGCGGCCCAGTCCTCAGCAGCCACCATCACCCAGCTCGCAGAAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GCTGCGGCCTGGTCACTCACGGTGGGCACTGCGGCTTaGGCAGAGGACACCATCTTGCTTCCAGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: AAAWSLTVGTAA*AEDTILLPGWR
Trigger: CCTCCAGCCTGGAAGCAAGATGGTGTCCTCTGCCAAAGCCGCAGTGCCCACCGTGAGTGACCAGGCCGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 72 bp TATCCTGGCCGAGAGGTGGCAGCGAGTCGAGCTCACTaGGATCATCCTGGGCCTGCTGGACGGCGTGCATGC +
Preference number: 6 (lower is better)
Translates to: YPGREVAASRAH*DHPGPAGRRAC
Trigger: GCATGCACGCCGTCCAGCAGGCCCAGGATGATCTCAGTGAGCTCGACTCGCTGCCACCTCTCGGCCAGGATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp AAGGTGGCAGACCTCCTCTGGTTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGCCAGGTGCCCATAGTC +
Preference number: 6 (lower is better)
Translates to: KVADLLWFRRGC*HLALESQVPIV
Trigger: GACTATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGGTCTGCCACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CCA 72 bp GGGTCGGTTGTCGATGCAGCCACTCCACGGGCGGCCTaGGCCAGTGTTTTCAGAGCTTGGGCCGTCTCTCTA +
Preference number: 6 (lower is better)
Translates to: GSVVDAATPRAA*ASVFRAWAVSL
Trigger: TAGAGAGACGGCCCAAGCTCTGAAAACACTGGCCCAGGCCGCCCGTGGAGTGGCTGCATCGACAACCGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CGGAGCCCTCCATCACGTCTCGAGCAGAATCTAACATaGCATGGGCGGCCGCGGGGTCGGTTGTCGATGCAG +
Preference number: 6 (lower is better)
Translates to: RSPPSRLEQNLT*HGRPRGRLSMQ
Trigger: CTGCATCGACAACCGACCCCGCGGCCGCCCATGCCATGTTAGATTCTGCTCGAGACGTGATGGAGGGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp CTTAAGGTGGCAGACCTCCTCTGGTTCCGCCGTGGCTaGTGCCATCTGGCCCTGGAAAGCCAGGTGCCCATA +
Preference number: 6 (lower is better)
Translates to: LKVADLLWFRRG*CHLALESQVPI
Trigger: TATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGGTCTGCCACCTTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS GCA 72 bp CTGGAATCCGATCTCCTCTGGTTCCGCCGTGGCTGCTaGCATCTGGCCCTGGAAAGCCAGGTGCCCATAGTC +
Preference number: 6 (lower is better)
Translates to: LESDLLWFRRGC*HLALESQVPIV
Trigger: GACTATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGATCGGATTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GAGATCATGGAGGGCCTGGCTGACCACGCTGGCCGCTaGGCTGACCTGCTTCAGGAGCTCACTATCGGTAGT +
Preference number: 6 (lower is better)
Translates to: EIMEGLADHAGR*ADLLQELTIGS
Trigger: ACTACCGATAGTGAGCTCCTGAAGCAGGTCAGCGCAGCGGCCAGCGTGGTCAGCCAGGCCCTCCATGATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp ACCCGGAGGCCTTCTGCAGCTTCTCTCAGCCTTTGCTaGTGGTCCTCATTCTCTGGGTTGGCTGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: TRRPSAASLSLC*WSSFSGLAAAP
Trigger: GGGGGCTGCAGCCAACCCAGAGAATGAGGACCAGCAGCAAAGGCTGAGAGAAGCTGCAGAAGGCCTCCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp TCAGCCCCTGTGACCACTGTCCGTCGTCTGCAGCATTaGCAGGGATGGAGCCCACCTTTCCTTGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: SAPVTTVRRLQH*QGWSPPFLGPP
Trigger: TGGTGGCCCAAGGAAAGGTGGGCTCCATCCCTGCCAATGCTGCAGACGACGGACAGTGGTCACAGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CCCTCCATCACGTCTCGAGCAGAATCTAACATGGCATaGGCGGCCGCGGGGTCGGTTGTCGATGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: PSITSRAESNMA*AAAGSVVDAAT
Trigger: AGTGGCTGCATCGACAACCGACCCCGCGGCCGCCCATGCCATGTTAGATTCTGCTCGAGACGTGATGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GCCTGGGCTGCAGCCTCTGTCAGCCCACAGAGAGCCTaGGATGCAATCCCCACACATTCCCCAAAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: AWAAASVSPQRA*DAIPTHSPKAG
Trigger: CCCTGCCTTTGGGGAATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGCTGACAGAGGCTGCAGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GAGAGCCAGCTGGGCACTCAGGTCTTCAGCTTGAGCTaGGCTCCCCCTCACTCCCTGGACCAGCTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: ESQLGTQVFSLS*APPHSLDQLRD
Trigger: ATCCCTCAGCTGGTCCAGGGAGTGAGGGGGAGCCAAGCTCAAGCTGAAGACCTGAGTGCCCAGCTGGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 90 bp CTGGCTGGAGATGATGAGAGCCAGCTGGGCACTCAGGTCTTCAGCTaGAGCTTGGCTCCCCCTCACTCCCTGGACCAGCTGAGGGATGTG +
Preference number: 6 (lower is better)
Translates to: LAGDDESQLGTQVFS*SLAPPHSLDQLRDV
Trigger: CACATCCCTCAGCTGGTCCAGGGAGTGAGGGGGAGCCAAGCTCAAGCTGAAGACCTGAGTGCCCAGCTGGCTCTCATCATCTCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 72 bp CTCCCTCCTCATCCATGGAGGGCTGCTGGCACCTACTaGGGTGTCTGGCTCAGGAAGTTCCACAGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: LPPHPWRAAGTY*GVWLRKFHRLH
Trigger: GTGGAGCCTGTGGAACTTCCTGAGCCAGACACCTCAGTAGGTGCCAGCAGCCCTCCATGGATGAGGAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS TCA 72 bp CTCCAGGTGCAATCAGGGCCTGCTTGGCCTCTTGAATaGGCATGGCGGAGCCCTCCATCACGTCTCGAGCAG +
Preference number: 6 (lower is better)
Translates to: LQVQSGPAWPLE*AWRSPPSRLEQ
Trigger: CTGCTCGAGACGTGATGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGCCCTGATTGCACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp CTCTCCAGAAGTAGGCTGCACAGCTTTCAGCAAGTCTaGCACCGCCCCAGCGAGGGTCCTGGCAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LSRSRLHSFQQV*HRPSEGPGSSE
Trigger: CTCAGAGCTGCCAGGACCCTCGCTGGGGCGGTGTCAGACTTGCTGAAAGCTGTGCAGCCTACTTCTGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp TGGAGGAGTGCCTTCATCCAGCTTGCTCATGGCTTCTaGAATGGCGTCCACCATGCCCCCAACCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: WRSAFIQLAHGF*NGVHHAPNQPH
Trigger: GTGGGGCTGGTTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCACTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGCTGCAGCCTCTGTCAGCCCACAGAGAGCCTTGGATaGAATCCCCACACATTCCCCAAAGGCAGGGAGGTC +
Preference number: 6 (lower is better)
Translates to: GCSLCQPTESLG*NPHTFPKGREV
Trigger: GACCTCCCTGCCTTTGGGGAATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGCTGACAGAGGCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGAAGATACAGCCGTGGCCCAGGTCCTGCACACGAGTaGGAATCTGGAATCCGATCTCCTCTGGTTCCGCCG +
Preference number: 6 (lower is better)
Translates to: GRYSRGPGPAHE*ESGIRSPLVPP
Trigger: CGGCGGAACCAGAGGAGATCGGATTCCAGATTCGCACTCGTGTGCAGGACCTGGGCCACGGCTGTATCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp AGCTCACTGAGATCATCCTGGGCCTGCTGGACGGCGTaGATGCTTGTGTTGATGGTCCCCATCAGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SSLRSSWACWTA*MLVLMVPIRAC
Trigger: GCAGGCCCTGATGGGGACCATCAACACAAGCATGCACGCCGTCCAGCAGGCCCAGGATGATCTCAGTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp GACACAGTTCTCCACCGAGCGGTCCACCAGCTTCCCTaGTTCAATCAGCTGCTCCTGGCACACAGGGGAGCT +
Preference number: 6 (lower is better)
Translates to: DTVLHRAVHQLP*FNQLLLAHRGA
Trigger: AGCTCCCCTGTGTGCCAGGAGCAGCTGATTGAAGCAGGGAAGCTGGTGGACCGCTCGGTGGAGAACTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp GCTACCCGGAGGCCTTCTGCAGCTTCTCTCAGCCTTTaGTGCTGGTCCTCATTCTCTGGGTTGGCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ATRRPSAASLSL*CWSSFSGLAAA
Trigger: GGCTGCAGCCAACCCAGAGAATGAGGACCAGCAGCAAAGGCTGAGAGAAGCTGCAGAAGGCCTCCGGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp GCTGTGGCGATGGGATCGATAAGGTGTCCGATTTCCTaGACCACCGAAGTCAGCTGCTCCTGCAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: AVAMGSIRCPIS*TTEVSCSCRAS
Trigger: GGAGGCCCTGCAGGAGCAGCTGACTTCGGTGGTCCAGGAAATCGGACACCTTATCGATCCCATCGCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CCTGGGCTGCAGCCTCTGTCAGCCCACAGAGAGCCTTaGATGCAATCCCCACACATTCCCCAAAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: PGLQPLSAHREP*MQSPHIPQRQG
Trigger: TCCCTGCCTTTGGGGAATGTGTGGGGATTGCATCCAAGGCTCTCTGTGGGCTGACAGAGGCTGCAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp GGGTCCACCAAGTTCTGGCATGCCATCTGGATGGCCTaGTTAGCCCTGGCAAACTGGATGGGGTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: GSTKFWHAIWMA*LALANWMGSTR
Trigger: CCTGGTGGACCCCATCCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CTGCTGCCAGGGTCCACCAAGTTCTGGCATGCCATCTaGATGGCCTGGTTAGCCCTGGCAAACTGGATGGGG +
Preference number: 6 (lower is better)
Translates to: LLPGSTKFWHAI*MAWLALANWMG
Trigger: CCCCATCCAGTTTGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp ACCTGTGATGGGCTGCTGCCAGGGTCCACCAAGTTCTaGCATGCCATCTGGATGGCCTGGTTAGCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: TCDGLLPGSTKF*HAIWMAWLALA
Trigger: TGCCAGGGCTAACCAGGCCATCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TGGCTGACTGGACGAAGTGCCTCTTGGCTACTGGGTTaGCCGTCTTGGATGAGGCGATGCGGCAGGCATTGC +
Preference number: 6 (lower is better)
Translates to: WLTGRSASWLLG*PSWMRRCGRHC
Trigger: GCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TGGCCCCGGGTGGCATGGACCACTTCCCCAGCAGACTaGTTCAGATCAGCTGCTGCCTGGTTCAGTTCACTC +
Preference number: 6 (lower is better)
Translates to: WPRVAWTTSPAD*FRSAAAWFSSL
Trigger: GAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGTGGTCCATGCCACCCGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp GCGACTTCCTTGGCTGACTGGACGAAGTGCCTCTTGGCTACTGGGTaGGCCGTCTTGGATGAGGCGATGCGGCAGGCATTGCACAAGGCT +
Preference number: 6 (lower is better)
Translates to: ATSLADWTKCLLATG*AVLDEAMRQALHKA
Trigger: AGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGCCAAGGAAGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp GGAGATGATGAGAGCCAGCTGGGCACTCAGGTCTTCAGCTTGAGCTaGGCTCCCCCTCACTCCCTGGACCAGCTGAGGGATGTGATCAGC +
Preference number: 6 (lower is better)
Translates to: GDDESQLGTQVFSLS*APPHSLDQLRDVIS
Trigger: GCTGATCACATCCCTCAGCTGGTCCAGGGAGTGAGGGGGAGCCAAGCTCAAGCTGAAGACCTGAGTGCCCAGCTGGCTCTCATCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 72 bp GCATCTCCAGGTGCAATCAGGGCCTGCTTGGCCTCTTaGATGAGCATGGCGGAGCCCTCCATCACGTCTCGA +
Preference number: 6 (lower is better)
Translates to: ASPGAIRACLAS*MSMAEPSITSR
Trigger: TCGAGACGTGATGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGCCCTGATTGCACCTGGAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GCTTGCCAGTTGTGTCACCTTATGTCCCAGCTGAGCTaGTTCTCCCCGAGCCGCTGTGGCGATGGGATCGAT +
Preference number: 6 (lower is better)
Translates to: ACQLCHLMSQLS*FSPSRCGDGID
Trigger: ATCGATCCCATCGCCACAGCGGCTCGGGGAGAAGCAGCTCAGCTGGGACATAAGGTGACACAACTGGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCGGCTGACAGGACCTAC +
Preference number: 6 (lower is better)
Translates to: EAMRQALHKADV*LATIVAADRTY
Trigger: GTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 72 bp TCTTGGCTACTGGGTTGGCCGTCTTGGATGAGGCGATaGGGCAGGCATTGCACAAGGCTGACGTGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: SWLLGWPSWMRR*GRHCTRLTCAW
Trigger: CCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp AATCTGGAATCCGATCTCCTCTGGTTCCGCCGTGGCTaGTGCCATCTGGCCCTGGAAAGCCAGGTGCCCATA +
Preference number: 6 (lower is better)
Translates to: NLESDLLWFRRG*CHLALESQVPI
Trigger: TATGGGCACCTGGCTTTCCAGGGCCAGATGGCAGCAGCCACGGCGGAACCAGAGGAGATCGGATTCCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp CCAAGACGTGCTCCAGGAGGTCCAAGTAGCCAAGGGTaGACTCCGTCCCGAAACGCAAGGCTCTGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: PRRAPGGPSSQG*TPSRNARLWFS
Trigger: TGAGAACCAGAGCCTTGCGTTTCGGGACGGAGTGCACCCTTGGCTACTTGGACCTCCTGGAGCACGTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTaGTTGGCAACAATTGTGGCGGCTGACAGGACCTGT +
Preference number: 6 (lower is better)
Translates to: EAMRQALHKADV*LATIVAADRTC
Trigger: ACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TCCAGGGGCCTTGTCCCTGGAAGGAATAGTGCAAGTTaGACACAGGCTCCATGGGGCTCAAGTCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: SRGLVPGRNSAS*TQAPWGSSPTA
Trigger: GGCTGTGGGACTTGAGCCCCATGGAGCCTGTGTCCAACTTGCACTATTCCTTCCAGGGACAAGGCCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 72 bp GAGTGCCTTCATCCAGCTTGCTCATGGCTTCTGCAATaGCGTCCACCATGCCCCCAACCAGCCCCACTTCAC +
Preference number: 6 (lower is better)
Translates to: ECLHPACSWLLQ*RPPCPQPAPLH
Trigger: GTGAAGTGGGGCTGGTTGGGGGCATGGTGGACGCCATTGCAGAAGCCATGAGCAAGCTGGATGAAGGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp AGCCCCCTTGAGCTGGTACATGGAAGGGTCGTCCACTaGCTTGCTGGCAGCTCCCTTGGTAGCACTGATGAG +
Preference number: 6 (lower is better)
Translates to: SPLELVHGRVVH*LAGSSLGSTDE
Trigger: CTCATCAGTGCTACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCCTTCCATGTACCAGCTCAAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CGGTCCACCAGCTTCCCTGCTTCAATCAGCTGCTCCTaGCACACAGGGGAGCTAATAGTGGGGCTCACAACC +
Preference number: 6 (lower is better)
Translates to: RSTSFPASISCS*HTGELIVGLTT
Trigger: GGTTGTGAGCCCCACTATTAGCTCCCCTGTGTGCCAGGAGCAGCTGATTGAAGCAGGGAAGCTGGTGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 72 bp AGGCCCTTCTCCTGCCTCAAGAACGTGGGCCCCAGGTaGATGGTGGGCATGCCACTAACAAGACTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: RPFSCLKNVGPR*MVGMPLTRLPP
Trigger: AGGAGGCAGTCTTGTTAGTGGCATGCCCACCATCAACCTGGGGCCCACGTTCTTGAGGCAGGAGAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp TTGGCTGACTGGACGAAGTGCCTCTTGGCTACTGGGTaGGCCGTCTTGGATGAGGCGATGCGGCAGGCATTG +
Preference number: 6 (lower is better)
Translates to: LADWTKCLLATG*AVLDEAMRQAL
Trigger: CAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCAAGAGGCACTTCGTCCAGTCAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp TGCATCTCCAGGTGCAATCAGGGCCTGCTTGGCCTCTaGAATGAGCATGGCGGAGCCCTCCATCACGTCTCG +
Preference number: 6 (lower is better)
Translates to: CISRCNQGLLGL*NEHGGALHHVS
Trigger: CGAGACGTGATGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGCCCTGATTGCACCTGGAGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TCTTTGTTCAGGCCCTTCTCCTGCCTCAAGAACGTGGGCCCCAGGTaGATGGTGGGCATGCCACTAACAAGACTGCCTCCTCCACCCCCA +
Preference number: 6 (lower is better)
Translates to: SLFRPFSCLKNVGPR*MVGMPLTRLPPPPP
Trigger: TGGGGGTGGAGGAGGCAGTCTTGTTAGTGGCATGCCCACCATCAACCTGGGGCCCACGTTCTTGAGGCAGGAGAAGGGCCTGAACAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 90 bp TTGGCTACTGGGTTGGCCGTCTTGGATGAGGCGATGCGGCAGGCATaGCACAAGGCTGACGTGTGCTTGGCAACAATTGTGGCGGCTGAC +
Preference number: 6 (lower is better)
Translates to: LATGLAVLDEAMRQA*HKADVCLATIVAAD
Trigger: GTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCCAGTAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TTGGCAGCCCCCTTGAGCTGGTACATGGAAGGGTCGTCCACTGGCTaGCTGGCAGCTCCCTTGGTAGCACTGATGAGATCAGAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: LAAPLSWYMEGSSTG*LAAPLVALMRSERA
Trigger: GGCCCTTTCTGATCTCATCAGTGCTACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCCTTCCATGTACCAGCTCAAGGGGGCTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TTGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTaGGCAACAATTGTGGCGGCTGACAGGACCTGTGATGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LDEAMRQALHKADVC*ATIVAADRTCDGLL
Trigger: CAGCAGCCCATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp GAGCGTGCAGTGCGAATGAGGTACGATGAACTCTCCAGCATGGTCTaGGCTGAGACCAGGATTGGTTCCTGTGCCTGGGAACCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: ERAVRMRYDELSSMV*AETRIGSCAWEPSE
Trigger: CTCCGAGGGTTCCCAGGCACAGGAACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGAGTTCATCGTACCTCATTCGCACTGCACGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp CGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTTGGCAACAATaGTGGCGGCTGACAGGACCTACAAAGCATGGAGCTAGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: RCGRHCTRLTCAWQQ*WRLTGPTKHGARLG
Trigger: CCCCAACCTAGCTCCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 90 bp TTGACGCTCTGCATCTCCAGGTGCAATCAGGGCCTGCTTGGCCTCTaGAATGAGCATGGCGGAGCCCTCCATCACGTCTCGAGCAGAATC +
Preference number: 6 (lower is better)
Translates to: LTLCISRCNQGLLGL*NEHGGALHHVSSRI
Trigger: GATTCTGCTCGAGACGTGATGGAGGGCTCCGCCATGCTCATTCAAGAGGCCAAGCAGGCCCTGATTGCACCTGGAGATGCAGAGCGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp TCCCTGACACAGTCACCTCCTTTCAGGAGGAATCCCTaGCCCCTGGTTGGCAACGTCTCACTGCACAGCCCA +
Preference number: 6 (lower is better)
Translates to: SLTQSPPFRRNP*PLVGNVSLHSP
Trigger: TGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCCTGAAAGGAGGTGACTGTGTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS TCA 72 bp CATCCACGGCTTCCTTCATCAACTGGGCGGCCTCTGTaGTGGCGTCATGGGTGTGTTGTGCCTTGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: HPRLPSSTGRPL*WRHGCVVPWGF
Trigger: GAAACCCCAAGGCACAACACACCCATGACGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGCCGTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp GCCCCACTTCACTGGCAGCTTCGTTCAGCGTCACCATaGTGTCATCCACGGCTTCCTTCATCAACTGGGCGG +
Preference number: 6 (lower is better)
Translates to: APLHWQLRSASP*CHPRLPSSTGR
Trigger: CCGCCCAGTTGATGAAGGAAGCCGTGGATGACATCATGGTGACGCTGAACGAAGCTGCCAGTGAAGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGTTGGCCGTCTTGGATGAGGCGATGCGGCAGGCATTaGACAAGGCTGACGTGTGCTTGGCAACAATTGTGG +
Preference number: 6 (lower is better)
Translates to: GWPSWMRRCGRH*TRLTCAWQQLW
Trigger: CCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGCTTTAGCCACCTGAGCCAGTCTTTGTTGACGCTCTaGATCTCCAGGTGCAATCAGGGCCTGCTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: GFSHLSQSLLTL*ISRCNQGLLGL
Trigger: GAGGCCAAGCAGGCCCTGATTGCACCTGGAGATGCAGAGCGTCAACAAAGACTGGCTCAGGTGGCTAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp CTGGGTTGGCTGCAGCCCCCTTTGCAGCTTCCACCATaGGAGCAGTGGAGTCAGCTAAGAGTTTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LGWLQPPLQLPP*EQWSQLRVLLL
Trigger: CAGCAGCAAAACTCTTAGCTGACTCCACTGCTCGCATGGTGGAAGCTGCAAAGGGGGCTGCAGCCAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp CCTGGAAGGAATAGTGCAAGTTGGACACAGGCTCCATaGGGCTCAAGTCCCACAGCCTGCTCCAGCACTGGT +
Preference number: 6 (lower is better)
Translates to: PGRNSASWTQAP*GSSPTACSSTG
Trigger: ACCAGTGCTGGAGCAGGCTGTGGGACTTGAGCCCCATGGAGCCTGTGTCCAACTTGCACTATTCCTTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 72 bp TCCTTCATCAACTGGGCGGCCTCTGTGATGGCGTCATaGGTGTGTTGTGCCTTGGGGTTTCCGCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: SFINWAASVMAS*VCCALGFPPPS
Trigger: AGAAGGTGGCGGAAACCCCAAGGCACAACACACCCATGACGCCATCACAGAGGCCGCCCAGTTGATGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CCATCTGGCCCTGGAAAGCCAGGTGCCCATAGTCACTaGTCATTTGTGAAGCCAGTCCTCCCAACTCCTCCG +
Preference number: 6 (lower is better)
Translates to: PSGPGKPGAHSH*SFVKPVLPTPP
Trigger: CGGAGGAGTTGGGAGGACTGGCTTCACAAATGACCAGTGACTATGGGCACCTGGCTTTCCAGGGCCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp ACATTGGTCACCATCACCTTGGCAGCCCCCTTGAGCTaGTACATGGAAGGGTCGTCCACTGGCTTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: TLVTITLAAPLS*YMEGSSTGLLA
Trigger: TGCCAGCAAGCCAGTGGACGACCCTTCCATGTACCAGCTCAAGGGGGCTGCCAAGGTGATGGTGACCAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CATTGCACAAGGCTGACGTGTGCTTGGCAACAATTGTaGCGGCTGACAGGACCTGTGATGGGCTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: HCTRLTCAWQQL*RLTGPVMGCCQ
Trigger: CTGGCAGCAGCCCATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTGACAGGACCTGTGATG +
Preference number: 6 (lower is better)
Translates to: RCGRHCTRLTCA*QQLWRLTGPVM
Trigger: CATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp AACCCATACCCTAGATGCCATATCCTGGCCGAGAGGTaGCAGCGAGTCGAGCTCACTGAGATCATCCTGGGC +
Preference number: 6 (lower is better)
Translates to: NPYPRCHILAER*QRVELTEIILG
Trigger: GCCCAGGATGATCTCAGTGAGCTCGACTCGCTGCCACCTCTCGGCCAGGATATGGCATCTAGGGTATGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp CTGCAGCCCCCTTTGCAGCTTCCACCATGCGAGCAGTaGAGTCAGCTAAGAGTTTTGCTGCTGCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LQPPLQLPPCEQ*SQLRVLLLPGA
Trigger: AGCTCCTGGCAGCAGCAAAACTCTTAGCTGACTCCACTGCTCGCATGGTGGAAGCTGCAAAGGGGGCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 72 bp GAATGTCCAGCCAGTACAGACCAGGTGGGTGGGTCTTaGGGGTTGATGGCCAGAGAGCGTGCAGTGCGAATG +
Preference number: 6 (lower is better)
Translates to: ECPASTDQVGGS*GLMARERAVRM
Trigger: CATTCGCACTGCACGCTCTCTGGCCATCAACCCCAAAGACCCACCCACCTGGTCTGTACTGGCTGGACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GGGTTGGCCGTCTTGGATGAGGCGATGCGGCAGGCATaGCACAAGGCTGACGTGTGCTTGGCAACAATTGTG +
Preference number: 6 (lower is better)
Translates to: GLAVLDEAMRQA*HKADVCLATIV
Trigger: CACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAAGACGGCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp ATGGAAGGGTCGTCCACTGGCTTGCTGGCAGCTCCCTaGGTAGCACTGATGAGATCAGAAAGGGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MEGSSTGLLAAP*VALMRSERALA
Trigger: GGCCAAGGCCCTTTCTGATCTCATCAGTGCTACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp AGGCATTGCACAAGGCTGACGTGTGCTTGGCAACAATaGTGGCGGCTGACAGGACCTGTGATGGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RHCTRLTCAWQQ*WRLTGPVMGCC
Trigger: GCAGCAGCCCATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GCGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTaGGCAACAATTGTGGCGGCTGACAGGACCTGTGAT +
Preference number: 6 (lower is better)
Translates to: AMRQALHKADVC*ATIVAADRTCD
Trigger: ATCACAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TTGGATGAGGCGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTaGGCAACAATTGTGGCGGCTGACAGGACCTACAAAGCATGGAGC +
Preference number: 6 (lower is better)
Translates to: LDEAMRQALHKADVC*ATIVAADRTYKAWS
Trigger: GCTCCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGCCTCATCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 72 bp TTCTGCACCAGGAAGATACAGCCGTGGCCCAGGTCCTaGACACGAGTGCGAATCTGGAATCCGATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: FCTRKIQPWPRS*TRVRIWNPISS
Trigger: AGAGGAGATCGGATTCCAGATTCGCACTCGTGTGCAGGACCTGGGCCACGGCTGTATCTTCCTGGTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp TCGTGCTTGGAGGTAGCGAATCCACAAGCAGCTTCTTaGTGGACTCCCCGATGCTCTTCAAGGCCACGTCCA +
Preference number: 6 (lower is better)
Translates to: SCLEVANPQAAS*WTPRCSSRPRP
Trigger: TGGACGTGGCCTTGAAGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGGATTCGCTACCTCCAAGCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GACCACTTCCCCAGCAGACTGGTTCAGATCAGCTGCTaGCTGGTTCAGTTCACTCTGGGCTTCCTGGAAAGG +
Preference number: 6 (lower is better)
Translates to: DHFPSRLVQISC*LVQFTLGFLER
Trigger: CCTTTCCAGGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCAGTCTGCTGGGGAAGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GTCAAAACTGTCTGTCGAGGCTCTCCAGAAGTAGGCTaGACAGCTTTCAGCAAGTCTGACACCGCCCCAGCG +
Preference number: 6 (lower is better)
Translates to: VKTVCRGSPEVG*TAFSKSDTAPA
Trigger: CGCTGGGGCGGTGTCAGACTTGCTGAAAGCTGTGCAGCCTACTTCTGGAGAGCCTCGACAGACAGTTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp CACAGTCACCTCCTTTCAGGAGGAATCCCTGACCCCTaGTTGGCAACGTCTCACTGCACAGCCCATGCATTC +
Preference number: 6 (lower is better)
Translates to: HSHLLSGGIPDP*LATSHCTAHAF
Trigger: GAATGCATGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCCTGAAAGGAGGTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 72 bp CGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTTaGCAACAATTGTGGCGGCTGACAGGACCTACAAAG +
Preference number: 6 (lower is better)
Translates to: RCGRHCTRLTCA*QQLWRLTGPTK
Trigger: CTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp AGGCCACGAGAGGTCAGAAAGCCCAGTGAACACCCATaGCGGTGCATGGCTGAACGCACAGCAACATTCTCA +
Preference number: 6 (lower is better)
Translates to: RPREVRKPSEHP*RCMAERTATFS
Trigger: TGAGAATGTTGCTGTGCGTTCAGCCATGCACCGCCATGGGTGTTCACTGGGCTTTCTGACCTCTCGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559908.1
CDS CAA 72 bp GCGATGCGGCAGGCATTGCACAAGGCTGACGTGTGCTaGGCAACAATTGTGGCGGCTGACAGGACCTACAAA +
Preference number: 6 (lower is better)
Translates to: AMRQALHKADVC*ATIVAADRTYK
Trigger: TTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCTGCCGCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp CCCTTGAGCTGGTACATGGAAGGGTCGTCCACTGGCTaGCTGGCAGCTCCCTTGGTAGCACTGATGAGATCA +
Preference number: 6 (lower is better)
Translates to: PLSWYMEGSSTG*LAAPLVALMRS
Trigger: TGATCTCATCAGTGCTACCAAGGGAGCTGCCAGCAAGCCAGTGGACGACCCTTCCATGTACCAGCTCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GGAAGTGGCTTCAGCTGGCTCTCCACGGCTGCCATCTaGGCATCCTGCAGTTCATTCTTAAGCGTCTGCACC +
Preference number: 6 (lower is better)
Translates to: GSGFSWLSTAAI*ASCSSFLSVCT
Trigger: GGTGCAGACGCTTAAGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGAGAGCCAGCTGAAGCCACTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp ACTGTATGGGAATGTCCAGCCAGTACAGACCAGGTGGGTGGGTCTTaGGGGTTGATGGCCAGAGAGCGTGCAGTGCGAATGAGGTACGAT +
Preference number: 6 (lower is better)
Translates to: TVWECPASTDQVGGS*GLMARERAVRMRYD
Trigger: ATCGTACCTCATTCGCACTGCACGCTCTCTGGCCATCAACCCCAAAGACCCACCCACCTGGTCTGTACTGGCTGGACATTCCCATACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp CCCAAAGGCAGGGAGGTCTCCGGTCTTGGCATTCTGTaGAATCCCTGCCATCGATTCACCCAGAACCTTGGA +
Preference number: 6 (lower is better)
Translates to: PKGREVSGLGIL*NPCHRFTQNLG
Trigger: TCCAAGGTTCTGGGTGAATCGATGGCAGGGATTTCACAGAATGCCAAGACCGGAGACCTCCCTGCCTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp CAGGTTGGCAGTAGCAATCACGTCCTCCTGTCTACATaGGTTCCCAGCTGCCACGGCTTTGGCTGTTGCCAT +
Preference number: 6 (lower is better)
Translates to: QVGSSNHVLLST*VPSCHGFGCCH
Trigger: ATGGCAACAGCCAAAGCCGTGGCAGCTGGGAACTCATGTAGACAGGAGGACGTGATTGCTACTGCCAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp AAAAGCTGCCTTCTGGGCTGCACGGACAAGATTGTCTaGGGCTCTTTTCACAGCATTTCCTGCCGCCCGCTC +
Preference number: 6 (lower is better)
Translates to: KSCLLGCTDKIV*GSFHSISCRPL
Trigger: GAGCGGGCGGCAGGAAATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494733.5
CDS GCA 72 bp TTACATCCTCCCCAACAGTTACCTGTGATGGGCTGCTaGCAGGGTCCACCAAGTTCTGGCATGCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: LHPPQQLPVMGC*QGPPSSGMPSG
Trigger: TCCAGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTAACTGTTGGGGAGGATGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 72 bp TCTGCTTTGCTGAGGCTGGTAACACCCCTTTGGCCTTaGTGGATGGGTAAGGACTCCCAGATACACCAGCTC +
Preference number: 6 (lower is better)
Translates to: SALLRLVTPLWP*WMGKDSQIHQL
Trigger: GAGCTGGTGTATCTGGGAGTCCTTACCCATCCAGCAAGGCCAAAGGGGTGTTACCAGCCTCAGCAAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 72 bp CGAGAGGTCAGAAAGCCCAGTGAACACCCATGGCGGTaGATGGCTGAACGCACAGCAACATTCTCAATGGTC +
Preference number: 6 (lower is better)
Translates to: REVRKPSEHPWR*MAERTATFSMV
Trigger: GACCATTGAGAATGTTGCTGTGCGTTCAGCCATGCACCGCCATGGGTGTTCACTGGGCTTTCTGACCTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559908.1
CDS CCA 72 bp GTCACCTCCTTTCAGGAGGAATCCCTGACCCCTGGTTaGCAACGTCTCACTGCACAGCCCATGCATTCCTTA +
Preference number: 6 (lower is better)
Translates to: VTSFQEESLTPG*QRLTAQPMHSL
Trigger: TAAGGAATGCATGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCCTGAAAGGAGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 72 bp GTCACCATGATGTCATCCACGGCTTCCTTCATCAACTaGGCGGCCTCTGTGATGGCGTCATGGGTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: VTMMSSTASFIN*AASVMASWVCC
Trigger: ACAACACACCCATGACGCCATCACAGAGGCCGCCCAGTTGATGAAGGAAGCCGTGGATGACATCATGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp AGTGTGTGTGTGCATCTTAAAATAGGGGTCTTAAGGTaGCAGACCTCCTCTGGTTCCGCCGTGGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SVCVHLKIGVLR*QTSSGSAVAAA
Trigger: GGCAGCAGCCACGGCGGAACCAGAGGAGGTCTGCCACCTTAAGACCCCTATTTTAAGATGCACACACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CCA 72 bp CCACACATTCCCCAAAGGCAGGGAGGTCTCCGGTCTTaGCATTCTGTGAAATCCCTGCCATCGATTCACCCA +
Preference number: 6 (lower is better)
Translates to: PHIPQRQGGLRS*HSVKSLPSIHP
Trigger: TGGGTGAATCGATGGCAGGGATTTCACAGAATGCCAAGACCGGAGACCTCCCTGCCTTTGGGGAATGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TGCTTGGAGGTAGCGAATCCACAAGCAGCTTCTTGCTaGACTCCCCGATGCTCTTCAAGGCCACGTCCACAT +
Preference number: 6 (lower is better)
Translates to: CLEVANPQAASC*TPRCSSRPRPH
Trigger: ATGTGGACGTGGCCTTGAAGAGCATCGGGGAGTCCAGCAAGAAGCTGCTTGTGGATTCGCTACCTCCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TGGTTCAGATCAGCTGCTGCCTGGTTCAGTTCACTCTaGGCTTCCTGGAAAGGCTTCGTGCTTGGAGGTAGC +
Preference number: 6 (lower is better)
Translates to: WFRSAAAWFSSL*ASWKGFVLGGS
Trigger: GCTACCTCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACCAGGCAGCAGCTGATCTGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp AGTCACCTCCTTTCAGGAGGAATCCCTGACCCCTGGTaGGCAACGTCTCACTGCACAGCCCATGCATTCCTT +
Preference number: 6 (lower is better)
Translates to: SHLLSGGIPDPW*ATSHCTAHAFL
Trigger: AAGGAATGCATGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCCTGAAAGGAGGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CAA 72 bp ATCAAGGGTGCGGTGGCGATGCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCATCCAGGGCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: IKGAVAMRHLLR*SSEKSPSRAAK
Trigger: CTTGGCTGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CAA 72 bp GCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATaGCGGTTGTCTTCAGAGAAATCCCCATCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ASIKGAVAMRHL*RLSSEKSPSRA
Trigger: GGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp GCACTCTTTCTGGCCCGGAGCTTGTTGGGTACACAGAGTGATGAGTaGATTGATGCTCTCTGTCACAGCTCTTGCAGCTGCAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: ALFLARSLLGTQSDE*IDALCHSSCSCSQE
Trigger: CTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGAGCATCAATCAACTCATCACTCTGTGTACCCAACAAGCTCCGGGCCAGAAAGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp GATGCAATCCCCACACATTCCCCAAAGGCAGGGAGGTCTCCGGTCTaGGCATTCTGTGAAATCCCTGCCATCGATTCACCCAGAACCTTG +
Preference number: 6 (lower is better)
Translates to: DAIPTHSPKAGRSPV*AFCEIPAIDSPRTL
Trigger: CAAGGTTCTGGGTGAATCGATGGCAGGGATTTCACAGAATGCCAAGACCGGAGACCTCCCTGCCTTTGGGGAATGTGTGGGGATTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TCATCAGCTTTGCCAAAAGCTGCCTTCTGGGCTGCACGGACAAGATaGTCTGAGGCTCTTTTCACAGCATTTCCTGCCGCCTGTAGCCGC +
Preference number: 6 (lower is better)
Translates to: SSALPKAAFWAARTR*SEALFTAFPAACSR
Trigger: GCGGCTACAGGCGGCAGGAAATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGGCAAAGCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TCATCAGCTTTGCCAAAAGCTGCCTTCTGGGCTGCACGGACAAGATaGTCTGAGGCTCTTTTCACAGCATTTCCTGCCGCCCGCTCCAAC +
Preference number: 6 (lower is better)
Translates to: SSALPKAAFWAARTR*SEALFTAFPAARSN
Trigger: GTTGGAGCGGGCGGCAGGAAATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGGCAAAGCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494733.5
CDS CAA 90 bp GTTTCCCCTGGAAGTGGCTTCAGCTGGCTCTCCACGGCTGCCATCTaGGCATCCTGCAGTTCATTCTTAAGCGTCTGCACCGTATTCAGA +
Preference number: 6 (lower is better)
Translates to: VSPGSGFSWLSTAAI*ASCSSFLSVCTVFR
Trigger: TCTGAATACGGTGCAGACGCTTAAGAATGAACTGCAGGATGCCAAGATGGCAGCCGTGGAGAGCCAGCTGAAGCCACTTCCAGGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp CTGGAAAGCCAGGTGCCCATAGTCACTGGTCATTTGTaGAGCCAGTCCTCCCAACTCCTCCGGGTTAGTAAC +
Preference number: 6 (lower is better)
Translates to: LESQVPIVTGHL*SQSSQLLRVSN
Trigger: GTTACTAACCCGGAGGAGTTGGGAGGACTGGCTTCACAAATGACCAGTGACTATGGGCACCTGGCTTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp CGGCGACTCGCTTGGAGAAAGCGGCCAGCTGCTGCTTaGATTCTGGGGTTGGTTTCTGAAGAATCACCAAGA +
Preference number: 6 (lower is better)
Translates to: RRLAWRKRPAAA*ILGLVSEESPR
Trigger: TCTTGGTGATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTCCAAGCGAGTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp CTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATTaGGGTTGTCTTCAGAGAAATCCCCATCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LQSRVRWRCDTY*GCLQRNPHPGQ
Trigger: CTGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS GCA 72 bp GAACGCTGTCAGGTTCTCCACAGCTTCAATCAAGGGTaGGGTGGCGATGCGACACTTATTGCGGTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: ERCQVLHSFNQG*GGDATLIAVVF
Trigger: GAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAACCTGACAGCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp ATCTTACATCCTCCCCAACAGTTACCTGTGATGGGCTaGTGCCAGGGTCCACCAAGTTCTGGCATGCCATCT +
Preference number: 6 (lower is better)
Translates to: ILHPPQQLPVMG*CQGPPSSGMPS
Trigger: AGATGGCATGCCAGAACTTGGTGGACCCTGGCAGCAGCCCATCACAGGTAACTGTTGGGGAGGATGTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 72 bp CTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATTaGGGTTGTCTTCAGAGAAATCCCCATCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: LQSRVRWRCDTY*GCLQRNPHPGP
Trigger: AGGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp TCCCCGATGCTCTTCAAGGCCACGTCCACATCCTTCTaGCCAGGGAGGCAATTTACGCAGTTATTCAAGGAG +
Preference number: 6 (lower is better)
Translates to: SPMLFKATSTSF*PGRQFTQLFKE
Trigger: CTCCTTGAATAACTGCGTAAATTGCCTCCCTGGGCAGAAGGATGTGGACGTGGCCTTGAAGAGCATCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGTTCAGTTCACTCTGGGCTTCCTGGAAAGGCTTCGTaGTTGGAGGTAGCGAATCCACAAGCAGCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: GSVHSGLPGKAS*LEVANPQAASC
Trigger: GCAAGAAGCTGCTTGTGGATTCGCTACCTCCAAGCACGAAGCCTTTCCAGGAAGCCCAGAGTGAACTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CCAGCACCGTCATCTGCTGCTGATGATCAAGAATCTTaGAGGCCACACCAACTGCGGCTAAGATCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: PAPSSAADDQES*RPHQLRLRSRA
Trigger: AGCCCTTGATCTTAGCCGCAGTTGGTGTGGCCTCCAAGATTCTTGATCATCAGCAGCAGATGACGGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CAGCTCTTGCAGCTGCAGCCAGGAGATTTTTCGCATTaGGAGCTCCTGGATCTACAGAGAGAGACTTGGCAG +
Preference number: 6 (lower is better)
Translates to: QLLQLQPGDFSH*ELLDLQRETWQ
Trigger: CTGCCAAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCTGGCTGCAGCTGCAAGAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp GCTGGATGGGTAAGGACTCCCAGATACACCAGCTCTTaGGGCTGCTTTAGGTCCACATGGTCCTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: AGWVRTPRYTSS*GCFRSTWSLCF
Trigger: GAAACACAAGGACCATGTGGACCTAAAGCAGCCCCAAGAGCTGGTGTATCTGGGAGTCCTTACCCATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp ACCTGTTCTGCTTTGCTGAGGCTGGTAACACCCCTTTaGCCTTGCTGGATGGGTAAGGACTCCCAGATACAC +
Preference number: 6 (lower is better)
Translates to: TCSALLRLVTPL*PCWMGKDSQIH
Trigger: GTGTATCTGGGAGTCCTTACCCATCCAGCAAGGCCAAAGGGGTGTTACCAGCCTCAGCAAAGCAGAACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp CATTGCACAAGGCTGACGTGTGCTTGGCAACAATTGTaGCGGCTGACAGGACCTACAAAGCATGGAGCTAGG +
Preference number: 6 (lower is better)
Translates to: HCTRLTCAWQQL*RLTGPTKHGAR
Trigger: CCTAGCTCCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp GGAGAAAGCGGCCAGCTGCTGCTTGAATTCTGGGGTTaGTTTCTGAAGAATCACCAAGACGTGCTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: GESGQLLLEFWG*FLKNHQDVLQE
Trigger: CTCCTGGAGCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATaGCGGTTGTCTTCAGAGAAATCCCCATCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: ASIKGAVAMRHL*RLSSEKSPSRA
Trigger: TGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CAA 72 bp GTGCGAATGAGGTACGATGAACTCTCCAGCATGGTCTaGGCTGAGACCAGGATTGGTTCCTGTGCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: VRMRYDELSSMV*AETRIGSCAWE
Trigger: TTCCCAGGCACAGGAACCAATCCTGGTCTCAGCCAAGACCATGCTGGAGAGTTCATCGTACCTCATTCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp AGGCATTGCACAAGGCTGACGTGTGCTTGGCAACAATaGTGGCGGCTGACAGGACCTACAAAGCATGGAGCT +
Preference number: 6 (lower is better)
Translates to: RHCTRLTCAWQQ*WRLTGPTKHGA
Trigger: AGCTCCATGCTTTGTAGGTCCTGTCAGCCGCCACAATTGTTGCCAAGCACACGTCAGCCTTGTGCAATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp ATCAAGGGTGCGGTGGCGATGCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCATCCAGGGCCTTGATG +
Preference number: 6 (lower is better)
Translates to: IKGAVAMRHLLR*SSEKSPSRALM
Trigger: CATCAAGGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp AGATCAGAAAGGGCCTTGGCCACATCTTTGATGGCATaGATCAAAACCACCTGGGTCTCGGGGTCGTCGGAG +
Preference number: 6 (lower is better)
Translates to: RSERALATSLMA*IKTTWVSGSSE
Trigger: CTCCGACGACCCCGAGACCCAGGTGGTTTTGATCAATGCCATCAAAGATGTGGCCAAGGCCCTTTCTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GCCGTCAACATATCTGACACGGCTTTCCGGCTCAGGTaGGCAGTAGCAATCACGTCCTCCTGTCTACATGAG +
Preference number: 6 (lower is better)
Translates to: AVNISDTAFRLR*AVAITSSCLHE
Trigger: CTCATGTAGACAGGAGGACGTGATTGCTACTGCCAACCTGAGCCGGAAAGCCGTGTCAGATATGTTGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp TTGCCAAAAGCTGCCTTCTGGGCTGCACGGACAAGATaGTCTGAGGCTCTTTTCACAGCATTTCCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: LPKAAFWAARTR*SEALFTAFPAA
Trigger: GGCGGCAGGAAATGCTGTGAAAAGAGCCTCAGACAATCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp TTGGTGATCCCCAGCAGGCGAGGCACCAGCTTGTTCTaGCCTTTCATCTTCTCCTTCACCAGGAAGAAGGAC +
Preference number: 6 (lower is better)
Translates to: LVIPSRRGTSLF*PFIFSFTRKKD
Trigger: GTCCTTCTTCCTGGTGAAGGAGAAGATGAAAGGCAAGAACAAGCTGGTGCCTCGCCTGCTGGGGATCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 90 bp TTCTCCACAGCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATaGCGGTTGTCTTCAGAGAAATCCCCATCCAGGGCAGCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: FSTASIKGAVAMRHL*RLSSEKSPSRAAKS
Trigger: TGACTTGGCTGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CAA 90 bp CTCTCTGTCACAGCTCTTGCAGCTGCAGCCAGGAGATTTTTCGCATaGGGAGCTCCTGGATCTACAGAGAGAGACTTGGCAGCTAACAGC +
Preference number: 6 (lower is better)
Translates to: LSVTALAAAARRFFA*GAPGSTERDLAANS
Trigger: GCTGTTAGCTGCCAAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCTGGCTGCAGCTGCAAGAGCTGTGACAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp CGCCAGCCTCAACTCATTTGCTTTCCTGAATCCACCTGTTCTGCTTaGCTGAGGCTGGTAACACCCCTTTGGCCTTGCTGGATGGGTAAG +
Preference number: 6 (lower is better)
Translates to: RQPQLICFPESTCSA*LRLVTPLWPCWMGK
Trigger: CTTACCCATCCAGCAAGGCCAAAGGGGTGTTACCAGCCTCAGCAAAGCAGAACAGGTGGATTCAGGAAAGCAAATGAGTTGAGGCTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 90 bp ACAGCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCATCCAGGGCCTTGATGGTCTTCACC +
Preference number: 6 (lower is better)
Translates to: TASIKGAVAMRHLLR*SSEKSPSRALMVFT
Trigger: GGTGAAGACCATCAAGGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TTCTCCACAGCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATaGCGGTTGTCTTCAGAGAAATCCCCATCCAGGGCCTTGATGGTC +
Preference number: 6 (lower is better)
Translates to: FSTASIKGAVAMRHL*RLSSEKSPSRALMV
Trigger: GACCATCAAGGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp GACGCAGCTCCTGACACAAGTAGTTTCGTGTCTTCTACCAAGGCCTaGGCCGTCTTGAGAATGTTCTCCCTGTGGTCTGCGAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: DAAPDTSSFVSSTKA*AVLRMFSLWSAKVS
Trigger: TGAGACCTTCGCAGACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGACACGAAACTACTTGTGTCAGGAGCTGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TGCTTGCAAGCCGTCAACATATCTGACACGGCTTTCCGGCTCAGGTaGGCAGTAGCAATCACGTCCTCCTGTCTACATGAGTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: CLQAVNISDTAFRLR*AVAITSSCLHEFPA
Trigger: AGCTGGGAACTCATGTAGACAGGAGGACGTGATTGCTACTGCCAACCTGAGCCGGAAAGCCGTGTCAGATATGTTGACGGCTTGCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp GTAGTTTCGTGTCTTCTACCAAGGCCTTGGCCGTCTTaGGAATGTTCTCCCTGTGGTCTGCGAAGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: VVSCLLPRPWPS*ECSPCGLRRSH
Trigger: GTGAGACCTTCGCAGACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGACACGAAACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp GTGGAAGGATGCTTGCTTGCAAGCCGTCAACATATCTaGCACGGCTTTCCGGCTCAGGTTGGCAGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: VEGCLLASRQHI*HGFPAQVGSSN
Trigger: ATTGCTACTGCCAACCTGAGCCGGAAAGCCGTGTCAGATATGTTGACGGCTTGCAAGCAAGCATCCTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGTTCTCCACAGCTTCAATCAAGGGTGCGGTGGCGATaGGACACTTATTGCGGTTGTCTTCAGAGAAATCCC +
Preference number: 6 (lower is better)
Translates to: GSPQLQSRVRWR*DTYCGCLQRNP
Trigger: GGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GTTCTCCCTGTGGTCTGCGAAGGTCTCACTGTTCTCTaGATTCAGCGTCCCCGCTGTTGCAAACATAATGGT +
Preference number: 6 (lower is better)
Translates to: VLPVVCEGLTVL*IQRPRCCKHNG
Trigger: ACCATTATGTTTGCAACAGCGGGGACGCTGAATGCAGAGAACAGTGAGACCTTCGCAGACCACAGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GAATTCATCAAAATCATCACTGAACTTTCCAGAGGCTaGAGCCAACTCTCCACTCTGGCCCCGGGTGGCATG +
Preference number: 6 (lower is better)
Translates to: EFIKIITELSRG*SQLSTLAPGGM
Trigger: CATGCCACCCGGGGCCAGAGTGGAGAGTTGGCTGCAGCCTCTGGAAAGTTCAGTGATGATTTTGATGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000494733.5
ENST00000559908.1
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CTGTCAGGTTCTCCACAGCTTCAATCAAGGGTGCGGTaGCGATGCGACACTTATTGCGGTTGTCTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: LSGSPQLQSRVR*RCDTYCGCLQR
Trigger: TCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGTGGAGAACCTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TCGCTTGGAGAAAGCGGCCAGCTGCTGCTTGAATTCTaGGGTTGGTTTCTGAAGAATCACCAAGACGTGCTC +
Preference number: 6 (lower is better)
Translates to: SLGESGQLLLEF*GWFLKNHQDVL
Trigger: GAGCACGTCTTGGTGATTCTTCAGAAACCAACCCCAGAATTCAAGCAGCAGCTGGCCGCTTTCTCCAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp AGGTCAGAAAGCCCAGTGAACACCCATGGCGGTGCATaGCTGAACGCACAGCAACATTCTCAATGGTCATCA +
Preference number: 6 (lower is better)
Translates to: RSESPVNTHGGA*LNAQQHSQWSS
Trigger: TGATGACCATTGAGAATGTTGCTGTGCGTTCAGCCATGCACCGCCATGGGTGTTCACTGGGCTTTCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559908.1
CDS CAA 72 bp CAAAAGGAGCCGGAGCTATTAGGGCCTGTCCATTTCTaGAAGGAGGCATTCAGAGAGCTAGGAGCAGCATCC +
Preference number: 6 (lower is better)
Translates to: QKEPELLGPVHF*KEAFRELGAAS
Trigger: GGATGCTGCTCCTAGCTCTCTGAATGCCTCCTTCAAGAAATGGACAGGCCCTAATAGCTCCGGCTCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp ACAGCTCTTGCAGCTGCAGCCAGGAGATTTTTCGCATaGGGAGCTCCTGGATCTACAGAGAGAGACTTGGCA +
Preference number: 6 (lower is better)
Translates to: TALAAAARRFFA*GAPGSTERDLA
Trigger: TGCCAAGTCTCTCTCTGTAGATCCAGGAGCTCCCAATGCGAAAAATCTCCTGGCTGCAGCTGCAAGAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp CCTGACACAAGTAGTTTCGTGTCTTCTACCAAGGCCTaGGCCGTCTTGAGAATGTTCTCCCTGTGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: PDTSSFVSSTKA*AVLRMFSLWSA
Trigger: CGCAGACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGACACGAAACTACTTGTGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp ACAGCTTCAATCAAGGGTGCGGTGGCGATGCGACACTTATTGCGGTaGTCTTCAGAGAAATCCCCATCCAGGGCAGCCAAGTCAAATTCG +
Preference number: 6 (lower is better)
Translates to: TASIKGAVAMRHLLR*SSEKSPSRAAKSNS
Trigger: CGAATTTGACTTGGCTGCCCTGGATGGGGATTTCTCTGAAGACAACCGCAATAAGTGTCGCATCGCCACCGCACCCTTGATTGAAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CAA 90 bp ATCAGTCTCATTCTCTCCAATCTGTCTCAGAAGATCCCCACTGGCTaGTCCGATGCTGCCAGCAGCAGTCAAAACTGTCTGTCGAGGCTC +
Preference number: 6 (lower is better)
Translates to: ISLILSNLSQKIPTG*SDAASSSQNCLSRL
Trigger: GAGCCTCGACAGACAGTTTTGACTGCTGCTGGCAGCATCGGACAAGCCAGTGGGGATCTTCTGAGACAGATTGGAGAGAATGAGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 90 bp GGAGCTCCTGGATCTACAGAGAGAGACTTGGCAGCTAACAGCAGCTaGCTGGATGCCATCGAGATATTCTTGAGGTTCCCTATCACTTGG +
Preference number: 6 (lower is better)
Translates to: GAPGSTERDLAANSS*LDAIEIFLRFPITW
Trigger: CCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTGCCAAGTCTCTCTCTGTAGATCCAGGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp CCCTGTTCTGTAGGACAGTGTCTTCGGCCACTTGGGCAACATTCTTaGCCTTTAGTACCAACATGGCAGCTGCATTGGCAACAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: PCSVGQCLRPLGQHS*PLVPTWQLHWQQLW
Trigger: CCAAAGCTGTTGCCAATGCAGCTGCCATGTTGGTACTAAAGGCAAAGAATGTTGCCCAAGTGGCCGAAGACACTGTCCTACAGAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 90 bp CCTTTGCAGCTTCCACCATGCGAGCAGTGGAGTCAGCTAAGAGTTTaGCTGCTGCCAGGAGCTTCTTTGAATTCTCCATGTCGATTTCGG +
Preference number: 6 (lower is better)
Translates to: PLQLPPCEQWSQLRV*LLPGASLNSPCRFR
Trigger: CCGAAATCGACATGGAGAATTCAAAGAAGCTCCTGGCAGCAGCAAAACTCTTAGCTGACTCCACTGCTCGCATGGTGGAAGCTGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp GGAGGAATCCCTGACCCCTGGTTGGCAACGTCTCACTaGACAGCCCATGCATTCCTTAATTTAACACTTCAG +
Preference number: 6 (lower is better)
Translates to: GGIPDPWLATSH*TAHAFLNLTLQ
Trigger: CTGAAGTGTTAAATTAAGGAATGCATGGGCTGTGCAGTGAGACGTTGCCAACCAGGGGTCAGGGATTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS CCA 72 bp TCTCATTCTCTCCAATCTGTCTCAGAAGATCCCCACTaGCTTGTCCGATGCTGCCAGCAGCAGTCAAAACTG +
Preference number: 6 (lower is better)
Translates to: SHSLQSVSEDPH*LVRCCQQQSKL
Trigger: CAGTTTTGACTGCTGCTGGCAGCATCGGACAAGCCAGTGGGGATCTTCTGAGACAGATTGGAGAGAATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 72 bp CACCAACTGCGGCTAAGATCAAGGGCTCAAAATAGCTaGCCAGTTGTGTCACCTTATGTCCCAGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: HQLRLRSRAQNS*PVVSPYVPAEL
Trigger: CAGCTCAGCTGGGACATAAGGTGACACAACTGGCAAGCTATTTTGAGCCCTTGATCTTAGCCGCAGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp AGTAGTTTCGTGTCTTCTACCAAGGCCTTGGCCGTCTaGAGAATGTTCTCCCTGTGGTCTGCGAAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: SSFVSSTKALAV*RMFSLWSAKVS
Trigger: TGAGACCTTCGCAGACCACAGGGAGAACATTCTCAAGACGGCCAAGGCCTTGGTAGAAGACACGAAACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp ATTCTCTCCAATCTGTCTCAGAAGATCCCCACTGGCTaGTCCGATGCTGCCAGCAGCAGTCAAAACTGTCTG +
Preference number: 6 (lower is better)
Translates to: ILSNLSQKIPTG*SDAASSSQNCL
Trigger: CAGACAGTTTTGACTGCTGCTGGCAGCATCGGACAAGCCAGTGGGGATCTTCTGAGACAGATTGGAGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 90 bp GAGCAGTGGAGTCAGCTAAGAGTTTTGCTGCTGCCAGGAGCTTCTTaGAATTCTCCATGTCGATTTCGGCTTCTGCATCTGACCTCATGG +
Preference number: 6 (lower is better)
Translates to: EQWSQLRVLLLPGAS*NSPCRFRLLHLTSW
Trigger: CCATGAGGTCAGATGCAGAAGCCGAAATCGACATGGAGAATTCAAAGAAGCTCCTGGCAGCAGCAAAACTCTTAGCTGACTCCACTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp TGCACATCCCTGGCACTGTCATCGTGCCCTGGTCATTaGATTTTCCAAACTTTGCCTAACACACTAAGAGCC +
Preference number: 6 (lower is better)
Translates to: CTSLALSSCPGH*IFQTLPNTLRA
Trigger: GGCTCTTAGTGTGTTAGGCAAAGTTTGGAAAATGCAATGACCAGGGCACGATGACAGTGCCAGGGATGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS GCA 72 bp CACACCTTCCTTTGCACATCCCTGGCACTGTCATCGTaGCCTGGTCATTGCATTTTCCAAACTTTGCCTAAC +
Preference number: 6 (lower is better)
Translates to: HTFLCTSLALSS*PGHCIFQTLPN
Trigger: GTTAGGCAAAGTTTGGAAAATGCAATGACCAGGGCACGATGACAGTGCCAGGGATGTGCAAAGGAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp AGTCGTCTGATAGTCGACAAATGTTCCCTTTGGTTCTaGAGGAGTGCCTTCATCCAGCTTGCTCATGGCTTC +
Preference number: 6 (lower is better)
Translates to: SRLIVDKCSLWF*RSAFIQLAHGF
Trigger: GAAGCCATGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCGACTATCAGACGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp AGCCTGCAATCAGCTGGGATATCTGCTCTCCCTCGGTaGTTTGTACTGAATAGTAGCTTTCCTGATACTCCC +
Preference number: 6 (lower is better)
Translates to: SLQSAGISALPR*FVLNSSFPDTP
Trigger: GGGAGTATCAGGAAAGCTACTATTCAGTACAAACCACCGAGGGAGAGCAGATATCCCAGCTGATTGCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 72 bp GGATCTACAGAGAGAGACTTGGCAGCTAACAGCAGCTaGCTGGATGCCATCGAGATATTCTTGAGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: GSTERDLAANSS*LDAIEIFLRFP
Trigger: AGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTGTTAGCTGCCAAGTCTCTCTCTGTAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GTAGGACAGTGTCTTCGGCCACTTGGGCAACATTCTTaGCCTTTAGTACCAACATGGCAGCTGCATTGGCAA +
Preference number: 6 (lower is better)
Translates to: VGQCLRPLGQHS*PLVPTWQLHWQ
Trigger: TTGCCAATGCAGCTGCCATGTTGGTACTAAAGGCAAAGAATGTTGCCCAAGTGGCCGAAGACACTGTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 90 bp CAGCTTGCTGGATGCCATCGAGATATTCTTGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGTCTGGAAGGTCAAAAGGAGCCGGAG +
Preference number: 6 (lower is better)
Translates to: QLAGCHRDILEVPYH*DLVFFCLEGQKEPE
Trigger: CTCCGGCTCCTTTTGACCTTCCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS TCA 72 bp CAGTTCATTCTTAAGCGTCTGCACCGTATTCAGAGCTaGATCGATTTCCATCGGACCACAAGCTTCATGGGC +
Preference number: 6 (lower is better)
Translates to: QFILKRLHRIQS*IDFHRTTSFMG
Trigger: GCCCATGAAGCTTGTGGTCCGATGGAAATCGATTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS GCA 72 bp GGTCCTGCCCTCCACCTTAGGCTGATACCAGGCAACTaGAAAGGAAGCAATTTGGACTTGGATTTTCTATTC +
Preference number: 6 (lower is better)
Translates to: GPALHLRLIPGN*KGSNLDLDFLF
Trigger: GAATAGAAAATCCAAGTCCAAATTGCTTCCTTTGCAGTTGCCTGGTATCAGCCTAAGGTGGAGGGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467297.1
CDS GCA 72 bp GCCATCTTGGCATCCTGCAGTTCATTCTTAAGCGTCTaGACCGTATTCAGAGCTGAATCGATTTCCATCGGA +
Preference number: 6 (lower is better)
Translates to: AILASCSSFLSV*TVFRAESISIG
Trigger: TCCGATGGAAATCGATTCAGCTCTGAATACGGTGCAGACGCTTAAGAATGAACTGCAGGATGCCAAGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp TCCAGGGCAGCCAAGTCAAATTCGATTAAAGAGAGCTaGATCGGGTGTCTGTGGTACACACTGAAAGTGCTT +
Preference number: 6 (lower is better)
Translates to: SRAAKSNSIKES*IGCLWYTLKVL
Trigger: AAGCACTTTCAGTGTGTACCACAGACACCCGATCCAGCTCTCTTTAATCGAATTTGACTTGGCTGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472902.1
CDS CCA 72 bp AACCACAGTCGTCTGATAGTCGACAAATGTTCCCTTTaGTTCTGGAGGAGTGCCTTCATCCAGCTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: NHSRLIVDKCSL*FWRSAFIQLAH
Trigger: ATGAGCAAGCTGGATGAAGGCACTCCTCCAGAACCAAAGGGAACATTTGTCGACTATCAGACGACTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000472902.1
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp CTTGGAGAATTAATCACACCTTCCTTTGCACATCCCTaGCACTGTCATCGTGCCCTGGTCATTGCATTTTCC +
Preference number: 6 (lower is better)
Translates to: LGELITPSFAHP*HCHRALVIAFS
Trigger: GGAAAATGCAATGACCAGGGCACGATGACAGTGCCAGGGATGTGCAAAGGAAGGTGTGATTAATTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp TTCCATTTCAAGTGCTTAACAGCCACATGTAGCCAGTaGCCACCATACTGTAGAGCCCAGATCCAGATGACA +
Preference number: 6 (lower is better)
Translates to: FHFKCLTATCSQ*PPYCRAQIQMT
Trigger: TGTCATCTGGATCTGGGCTCTACAGTATGGTGGCCACTGGCTACATGTGGCTGTTAAGCACTTGAAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp AACTTGGTTTTCACTACAACATCGTCGTCATCAGCTTaGCCAAAAGCTGCCTTCTGGGCTGCACGGACAAGA +
Preference number: 6 (lower is better)
Translates to: NLVFTTTSSSSA*PKAAFWAARTR
Trigger: TCTTGTCCGTGCAGCCCAGAAGGCAGCTTTTGGCAAAGCTGATGACGACGATGTTGTAGTGAAAACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000559174.1
ENST00000561311.5
ENST00000636159.1
CDS CAA 72 bp GGATGCCATCGAGATATTCTTGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGTCTGAGCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: GCHRDILEVPYH*DLVFFCLSLAS
Trigger: GCTGGCCAAGCTCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp CAGCTTGCTGGATGCCATCGAGATATTCTTGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGTCTGAGCTTGGCCAGCCATCTCAAT +
Preference number: 6 (lower is better)
Translates to: QLAGCHRDILEVPYH*DLVFFCLSLASHLN
Trigger: ATTGAGATGGCTGGCCAAGCTCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS TCA 72 bp GAATGGATTTCGTGTTTGGATTCGTCGACTTTGTTCTaGACCCATACCCTAGATGCCATATCCTGGCCGAGA +
Preference number: 6 (lower is better)
Translates to: EWISCLDSSTLF*THTLDAISWPR
Trigger: TCTCGGCCAGGATATGGCATCTAGGGTATGGGTTCAGAACAAAGTCGACGAATCCAAACACGAAATCCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CCA 72 bp TCCTTCCTTGCAGTACACACTGTTTTAATAAGTGACTaGGACCCCGTGCCACTCAGGTATGAGAGGTGTTAT +
Preference number: 6 (lower is better)
Translates to: SFLAVHTVLISD*DPVPLRYERCY
Trigger: ATAACACCTCTCATACCTGAGTGGCACGGGGTCCCAGTCACTTATTAAAACAGTGTGTACTGCAAGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CCA 72 bp ATTACCCTGTTCTGTAGGACAGTGTCTTCGGCCACTTaGGCAACATTCTTTGCCTTTAGTACCAACATGGCA +
Preference number: 6 (lower is better)
Translates to: ITLFCRTVSSAT*ATFFAFSTNMA
Trigger: TGCCATGTTGGTACTAAAGGCAAAGAATGTTGCCCAAGTGGCCGAAGACACTGTCCTACAGAACAGGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 72 bp AGTCAGCTAAGAGTTTTGCTGCTGCCAGGAGCTTCTTaGAATTCTCCATGTCGATTTCGGCTTCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: SQLRVLLLPGAS*NSPCRFRLLHL
Trigger: CAGATGCAGAAGCCGAAATCGACATGGAGAATTCAAAGAAGCTCCTGGCAGCAGCAAAACTCTTAGCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 72 bp CTAACAGCAGCTTGCTGGATGCCATCGAGATATTCTTaGGGTTCCCTATCACTTGGATCTGGTCTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: LTAACWMPSRYS*GSLSLGSGLLL
Trigger: CAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CCA 72 bp ATCGAGATATTCTTGAGGTTCCCTATCACTTGGATCTaGTCTTCTTTTGTCTGGAAGGTCAAAAGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: IEIFLRFPITWI*SSFVWKVKRSR
Trigger: CCGGCTCCTTTTGACCTTCCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp GCTAACAGCAGCTTGCTGGATGCCATCGAGATATTCTaGAGGTTCCCTATCACTTGGATCTGGTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: ANSSLLDAIEIF*RFPITWIWSSF
Trigger: AAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCCAGCAAGCTGCTGTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000489129.5
ENST00000494733.5
ENST00000561311.5
ENST00000636159.1
CDS CAA 90 bp TTCTTTGCCTTTAGTACCAACATGGCAGCTGCATTGGCAACAGCTTaGGCCAAACTCATTAAAACATCCTGGAATCGCTCATCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: FFAFSTNMAAALATA*AKLIKTSWNRSSVS
Trigger: TGAGACTGATGAGCGATTCCAGGATGTTTTAATGAGTTTGGCCAAAGCTGTTGCCAATGCAGCTGCCATGTTGGTACTAAAGGCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS TCA 72 bp GCAGCAACGTTTCGTTTTCATCTACTCCTTGTTCTCTaGATGTTCGGCTGTGATCCAGCCAATTTAGGTCAT +
Preference number: 6 (lower is better)
Translates to: AATFRFHLLLVL*MFGCDPANLGH
Trigger: ATGACCTAAATTGGCTGGATCACAGCCGAACATTCAGAGAACAAGGAGTAGATGAAAACGAAACGTTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474847.2
ENST00000561311.5
CDS TCA 72 bp CTCAGTGCAGATGCTTTGTATCAGTTGCGTTTTTGTTaGATTCTCACACAGGGGGCTGATTCAAAGTACCAC +
Preference number: 6 (lower is better)
Translates to: LSADALYQLRFC*ILTQGADSKYH
Trigger: GTGGTACTTTGAATCAGCCCCCTGTGTGAGAATTCAACAAAAACGCAACTGATACAAAGCATCTGCACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561197.5
CDS CCA 72 bp GATGCCATCGAGATATTCTTGAGGTTCCCTATCACTTaGATCTGGTCTTCTTTTGTCTGGAAGGTCAAAAGG +
Preference number: 6 (lower is better)
Translates to: DAIEIFLRFPIT*IWSSFVWKVKR
Trigger: CCTTTTGACCTTCCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp GGATGCCATCGAGATATTCTTGAGGTTCCCTATCACTaGGATCTGGTCTTCTTTTGTCTGGAAGGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: GCHRDILEVPYH*DLVFFCLEGQK
Trigger: CTTTTGACCTTCCAGACAAAAGAAGACCAGATCCAAGTGATAGGGAACCTCAAGAATATCTCGATGGCATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp CTCCTTGTCAATCTCACTGTGATTACTTCACTCCTTTaGCCTTCTGGCACCCCATTTCAAGGCACTTACAAA +
Preference number: 6 (lower is better)
Translates to: LLVNLTVITSLL*PSGTPFQGTYK
Trigger: TTTGTAAGTGCCTTGAAATGGGGTGCCAGAAGGCAAAAGGAGTGAAGTAATCACAGTGAGATTGACAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp TTTAGTACCAACATGGCAGCTGCATTGGCAACAGCTTaGGCCAAACTCATTAAAACATCCTGGAATCGCTCA +
Preference number: 6 (lower is better)
Translates to: FSTNMAAALATA*AKLIKTSWNRS
Trigger: TGAGCGATTCCAGGATGTTTTAATGAGTTTGGCCAAAGCTGTTGCCAATGCAGCTGCCATGTTGGTACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS CAA 72 bp ACATTCTTTGCCTTTAGTACCAACATGGCAGCTGCATaGGCAACAGCTTTGGCCAAACTCATTAAAACATCC +
Preference number: 6 (lower is better)
Translates to: TFFAFSTNMAAA*ATALAKLIKTS
Trigger: GGATGTTTTAATGAGTTTGGCCAAAGCTGTTGCCAATGCAGCTGCCATGTTGGTACTAAAGGCAAAGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561311.5
CDS GCA 72 bp TGCAATATTTGCTCCCACCTGAGTCATTATCTACAATaGTGGCATTTAGCTACCTTTGCAAGCTCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: CNICSHLSHYLQ*WHLATFASSER
Trigger: TCTTTCAGAGCTTGCAAAGGTAGCTAAATGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 90 bp GCACCCCATTTCAAGGCACTTACAAATTTCCAGATTCATCATATTTaGCAATATTTGCTCCCACCTGAGTCATTATCTACAATGCTGGCA +
Preference number: 6 (lower is better)
Translates to: APHFKALTNFQIHHI*QYLLPPESLSTMLA
Trigger: TGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCAAAATATGATGAATCTGGAAATTTGTAAGTGCCTTGAAATGGGGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 90 bp TTCAAGGCACTTACAAATTTCCAGATTCATCATATTTTGCAATATTaGCTCCCACCTGAGTCATTATCTACAATGCTGGCATTTAGCTAC +
Preference number: 6 (lower is better)
Translates to: FKALTNFQIHHILQY*LPPESLSTMLAFSY
Trigger: GTAGCTAAATGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCAAAATATGATGAATCTGGAAATTTGTAAGTGCCTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5
CDS CAA 72 bp CTTACAAATTTCCAGATTCATCATATTTTGCAATATTaGCTCCCACCTGAGTCATTATCTACAATGCTGGCA +
Preference number: 6 (lower is better)
Translates to: LTNFQIHHILQY*LPPESLSTMLA
Trigger: TGCCAGCATTGTAGATAATGACTCAGGTGGGAGCAAATATTGCAAAATATGATGAATCTGGAAATTTGTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489129.5