RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000095587

Ensembl transcript IDs: ENST00000357947.4, ENST00000469598.1, ENST00000506028.2

Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACGCTGGGCAGGGTCTGCCATATGCACAATATGAGCGTGTAGGCTaGGCCTCAGTCCAGGGCCGAGAAAGGCCAAAACAGAGCTTGGTG +
Preference number: 1 (lower is better)
Translates to: HAGQGLPYAQYERVG*ASVQGRERPKQSLV
Trigger: CACCAAGCTCTGTTTTGGCCTTTCTCGGCCCTGGACTGAGGCTCAGCCTACACGCTCATATTGTGCATATGGCAGACCCTGCCCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 90 bp CCGAGAAAGGCCAAAACAGAGCTTGGTGAAAGGAGAGGCAGGAAATaGAGAGCCAGTCCTGCAGGGCCCACAGTAAAGCGAGGACCAGGG +
Preference number: 1 (lower is better)
Translates to: PRKAKTELGERRGRK*RASPAGPTVKRGPG
Trigger: CCCTGGTCCTCGCTTTACTGTGGGCCCTGCAGGACTGGCTCTCCATTTCCTGCCTCTCCTTTCACCAAGCTCTGTTTTGGCCTTTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 90 bp CTGTATCAAAGCGCACGCTGGGCAGGGTCTGCCATATGCACAATATaGGCGTGTAGGCTGAGCCTCAGTCCAGGGCCGAGAAAGGCCAAA +
Preference number: 1 (lower is better)
Translates to: LYQSARWAGSAICTI*ACRLSLSPGPRKAK
Trigger: TTTGGCCTTTCTCGGCCCTGGACTGAGGCTCAGCCTACACGCTCATATTGTGCATATGGCAGACCCTGCCCAGCGTGCGCTTTGATACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 90 bp GAATCTACCCTAACAGGCAGGTGGGATTGGAGCCATGAGGTCAGCTaGTCCATTTGCTGTATCAAAGCGCACGCTGGGCAGGGTCTGCCA +
Preference number: 1 (lower is better)
Translates to: ESTLTGRWDWSHEVS*SICCIKAHAGQGLP
Trigger: TGGCAGACCCTGCCCAGCGTGCGCTTTGATACAGCAAATGGAGCAGCTGACCTCATGGCTCCAATCCCACCTGCCTGTTAGGGTAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 90 bp CTAACAGGCAGGTGGGATTGGAGCCATGAGGTCAGCTGCTCCATTTaGTGTATCAAAGCGCACGCTGGGCAGGGTCTGCCATATGCACAA +
Preference number: 1 (lower is better)
Translates to: LTGRWDWSHEVSCSI*CIKAHAGQGLPYAQ
Trigger: TTGTGCATATGGCAGACCCTGCCCAGCGTGCGCTTTGATACAGCAAATGGAGCAGCTGACCTCATGGCTCCAATCCCACCTGCCTGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 90 bp AGTTTCTTTGCAAGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTaGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAG +
Preference number: 1 (lower is better)
Translates to: SFFARTCVMPKSPQV*ASRGAAQLAPAESE
Trigger: CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCTTGCAAAGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 90 bp GGCCAAGTTTTCATCCCTTATGCCCAACATGGACAGAAGACAGCCTaGCACCTTTGCAAGCAAGTCCAGATTAGAGGAACGGCCAACCCC +
Preference number: 1 (lower is better)
Translates to: GQVFIPYAQHGQKTA*HLCKQVQIRGTANP
Trigger: GGGGTTGGCCGTTCCTCTAATCTGGACTTGCTTGCAAAGGTGCCAGGCTGTCTTCTGTCCATGTTGGGCATAAGGGATGAAAACTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 90 bp CAGATAAATGGAATCTACCCTAACAGGCAGGTGGGATTGGAGCCATaGGGTCAGCTGCTCCATTTGCTGTATCAAAGCGCACGCTGGGCA +
Preference number: 1 (lower is better)
Translates to: QINGIYPNRQVGLEP*GQLLHLLYQSARWA
Trigger: TGCCCAGCGTGCGCTTTGATACAGCAAATGGAGCAGCTGACCTCATGGCTCCAATCCCACCTGCCTGTTAGGGTAGATTCCATTTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 90 bp AGCAAGTCCAGATTAGAGGAACGGCCAACCCCAAGGCTGACCTTTTaGCACATAGGAGCAAGGGACAAGGAGAATGGTATGAAGAAGCAT +
Preference number: 1 (lower is better)
Translates to: SKSRLEERPTPRLTF*HIGARDKENGMKKH
Trigger: ATGCTTCTTCATACCATTCTCCTTGTCCCTTGCTCCTATGTGGCAAAAGGTCAGCCTTGGGGTTGGCCGTTCCTCTAATCTGGACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 90 bp TCCCTCATAAGAGGTCTTTGCACATTTTGCAAATGCAGTTTGAATTaGATGTCAAGGAGTCCAGGTGTGCCACGGCAAGTGCCTCCAAAG +
Preference number: 1 (lower is better)
Translates to: SLIRGLCTFCKCSLN*MSRSPGVPRQVPPK
Trigger: CTTTGGAGGCACTTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 90 bp TGTGCCACGGCAAGTGCCTCCAAAGCTAAAAGAAGAAATGTTCTTTaGAGCCCATGGAATTCCAAGCACAGGTGGAGTCTTCTCAAAGTC +
Preference number: 1 (lower is better)
Translates to: CATASASKAKRRNVL*SPWNSKHRWSLLKV
Trigger: GACTTTGAGAAGACTCCACCTGTGCTTGGAATTCCATGGGCTTCAAAGAACATTTCTTCTTTTAGCTTTGGAGGCACTTGCCGTGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 90 bp GACCTGAATTGGTCCCTCATAAGAGGTCTTTGCACATTTTGCAAATaGAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAA +
Preference number: 1 (lower is better)
Translates to: DLNWSLIRGLCTFCK*SLNWMSRSPGVPRQ
Trigger: TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGACCAATTCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 90 bp ACCCAATTAAAGCACAAAGCAGGCTGCAGTGATATCTTCTACCTCTaGTGTTTGCTTCTGGGGATGCTTGCAGGCAGGTCACTGATAATT +
Preference number: 1 (lower is better)
Translates to: TQLKHKAGCSDIFYL*CLLLGMLAGRSLII
Trigger: AATTATCAGTGACCTGCCTGCAAGCATCCCCAGAAGCAAACAGCAGAGGTAGAAGATATCACTGCAGCCTGCTTTGTGCTTTAATTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 90 bp ATGGGAGCTATCTTGGCTCTAACCAAAAACACTCATGTGCCGCCCTaGGTCCAACAACAACCAAACAGGACTTACAGTTATGTAAACATT +
Preference number: 1 (lower is better)
Translates to: MGAILALTKNTHVPP*VQQQPNRTYSYVNI
Trigger: AATGTTTACATAACTGTAAGTCCTGTTTGGTTGTTGTTGGACGCAGGGCGGCACATGAGTGTTTTTGGTTAGAGCCAAGATAGCTCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 90 bp CATACTAAAGAGATAAAAAGAAGTATCATTGTTTCACCGTCCTGCTaGGCAGCACCAACTCTGTTTCTGACTCCCTCCCACTTTTCTATG +
Preference number: 1 (lower is better)
Translates to: HTKEIKRSIIVSPSC*AAPTLFLTPSHFSM
Trigger: CATAGAAAAGTGGGAGGGAGTCAGAAACAGAGTTGGTGCTGCTCAGCAGGACGGTGAAACAATGATACTTCTTTTTATCTCTTTAGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 90 bp ACTTTAAAAACATCTGCTAAAGCCAAGGGAACATTTGTTCACAAATaGAACGCTAACAATACCAATCTGAAAGCTATCAAAGGGACCCAA +
Preference number: 1 (lower is better)
Translates to: TLKTSAKAKGTFVHK*NANNTNLKAIKGTQ
Trigger: TTGGGTCCCTTTGATAGCTTTCAGATTGGTATTGTTAGCGTTCCATTTGTGAACAAATGTTCCCTTGGCTTTAGCAGATGTTTTTAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 90 bp AGAACAAGTGCCAAGTGTTATGAATTCTGTTTGCAAGTTGGTGATTaGATACTAGTTAATCAGAGCAAAGTTACCAACGCACTCTTTAAC +
Preference number: 1 (lower is better)
Translates to: RTSAKCYEFCLQVGD*ILVNQSKVTNALFN
Trigger: GTTAAAGAGTGCGTTGGTAACTTTGCTCTGATTAACTAGTATTCAATCACCAACTTGCAAACAGAATTCATAACACTTGGCACTTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGGTGGGATTGGAGCCATaGGGTCAGCTGCTCCATTTG +
Preference number: 2 (lower is better)
Translates to: PQVWASRGAAQLAPAESEVGLEP*GQLLHL
Trigger: CAAATGGAGCAGCTGACCTCATGGCTCCAATCCCAC...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGTATCAAAGCGCACGCTaGGCAGGGTCTGCCATATGC +
Preference number: 2 (lower is better)
Translates to: PQVWASRGAAQLAPAESEYQSAR*AGSAIC
Trigger: GCATATGGCAGACCCTGCCCAGCGTGCGCTTTGATA...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTATGAGCGTGTAGGCTaGGCCTCAGTCCAGGGCCGA +
Preference number: 2 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAYERVG*ASVQGR
Trigger: TCGGCCCTGGACTGAGGCTCAGCCTACACGCTCATA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAAGTCCCCACAAGTGTaGGCTTCCAGAGGAGCGGCC +
Preference number: 2 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLKSPQV*ASRGAA
Trigger: GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCAGGAAGCTAGTCACTaGTTGACTTGTTCCACAAGG +
Preference number: 2 (lower is better)
Translates to: PQVWASRGAAQLAPAESEQEASH*LTCSTR
Trigger: CCTTGTGGAACAAGTCAATCAGTGACTAGCTTCCTG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCCCAAAAACACTCATGTaGCGCCCTGCGTCCAACAAC +
Preference number: 2 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAPKTLM*RPASNN
Trigger: GTTGTTGGACGCAGGGCGGCACATGAGTGTTTTTGG...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGACTCATGTGCCGCCCTaGGTCCAACAACAACCAAAC +
Preference number: 2 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLTHVPP*VQQQPN
Trigger: GTTTGGTTGTTGTTGGACGCAGGGCGGCACATGAGT...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGCGAGGACCAGGGGTTaGCATTTTCCACACTGCATT +
Preference number: 2 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAARTRG*HFPHCI
Trigger: AATGCAGTGTGGAAAATGCCAACCCCTGGTCCTCGC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTTCAGGTTTCTTGGTTaGCATGTCCCTGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAFRFLG*HVPGRE
Trigger: CTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCGTCAGCTGCTCCATTTaGTGTATCAAAGCGCACGCT +
Preference number: 2 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLVSCSI*CIKAHA
Trigger: AGCGTGCGCTTTGATACAGCAAATGGAGCAGCTGAC...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCACCAACTCTGTTTCTaGCTCCCTCCCACTTTTCTA +
Preference number: 2 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLHQLCF*LPPTFL
Trigger: TAGAAAAGTGGGAGGGAGTCAGAAACAGAGTTGGTG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCGACACAGTCCTCTGGTaGCACATTCTGATCTGTAAA +
Preference number: 2 (lower is better)
Translates to: RTCVMPKSPQVWASRGAADTVLW*HILICK
Trigger: TTTACAGATCAGAATGTGGCACCAGAGGACTGTGTC...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 90 bp AAGCAAGTCCAGATTAGAGGAACGGCCAACCCCAAGGCTGACCTTTaGCCACATAGGAGCAAGGGACAAGGAGAATGGTATGAAGAAGCA +
Preference number: 2 (lower is better)
Translates to: KQVQIRGTANPKADL*PHRSKGQGEWYEEA
Trigger: TGCTTCTTCATACCATTCTCCTTGTCCCTTGCTCCTATGTGGCAAAAGGTCAGCCTTGGGGTTGGCCGTTCCTCTAATCTGGACTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAAGTGCCAAGTGTTATaGATTCTGTTTGCAAGTTGG +
Preference number: 2 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLKCQVL*ILFASW
Trigger: CCAACTTGCAAACAGAATTCATAACACTTGGCACTT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGAAATTGGCCATATGGTaGCAATTGTTGAAGCTGTGT +
Preference number: 2 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLKLAIW*QLLKLC
Trigger: ACACAGCTTCAACAATTGTCACCATATGGCCAATTT...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCCAAGGCTGACCTTTTaGCACATAGGAGCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: GLSLVKPASSFFARTCVMPRLTF*HIGARD
Trigger: GTCCCTTGCTCCTATGTGGCAAAAGGTCAGCCTTGG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGACGCTGGGCAGGGTCTaGCATATGCACAATATGAGC +
Preference number: 2 (lower is better)
Translates to: GLSLVKPASSFFARTCVMTLGRV*HMHNMS
Trigger: GCTCATATTGTGCATATGGCAGACCCTGCCCAGCGT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCAATGACTCTGAGAAATaGCTTTGTGGTCTCCTAACT +
Preference number: 2 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEANDSEK*LCGLLT
Trigger: AGTTAGGAGACCACAAAGCCATTTCTCAGAGTCATT...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAATTCCAAGCACAGGTaGAGTCTTCTCAAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLNSKHR*SLLKVN
Trigger: ATTGACTTTGAGAAGACTCCACCTGTGCTTGGAATT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAGGACAGAAGACAGCCTaGCACCTTTGCAAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQGQKTA*HLCKQV
Trigger: GACTTGCTTGCAAAGGTGCCAGGCTGTCTTCTGTCC...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 90 bp GTCCCTCATAAGAGGTCTTTGCACATTTTGCAAATGCAGTTTGAATaGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAGTGCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: VPHKRSLHILQMQFE*DVKESRCATASASK
Trigger: TTTGGAGGCACTTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAGTTTCACCGTCCTGCTaGGCAGCACCAACTCTGTTT +
Preference number: 2 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKVSPSC*AAPTLF
Trigger: AAACAGAGTTGGTGCTGCTCAGCAGGACGGTGAAAC...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 90 bp AATTGGTCCCTCATAAGAGGTCTTTGCACATTTTGCAAATGCAGTTaGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: NWSLIRGLCTFCKCS*NWMSRSPGVPRQVP
Trigger: AGGCACTTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGACCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAACCCTTATGCCCAACATaGACAGAAGACAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKPLCPT*TEDSLA
Trigger: TGCCAGGCTGTCTTCTGTCCATGTTGGGCATAAGGG...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 90 bp CATAAGGGACCTGAATTGGTCCCTCATAAGAGGTCTTTGCACATTTaGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: HKGPELVPHKRSLHI*QMQFELDVKESRCA
Trigger: GGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGACCAATTCAGGTCCCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAACAAGGAGAATGGTATaGAGAAGCATAGCCGGAATG +
Preference number: 2 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQTRRMV*RSIAGM
Trigger: CATTCCGGCTATGCTTCTTCATACCATTCTCCTTGT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTTATTTTCAGGTTTCTTaGTTGACATGTCCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCYFQVS*LTCPWQ
Trigger: CTGCCAGGGACATGTCAACCAAGAAACCTGAAAATA...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 90 bp TGTTCACCCCATAAGGGACCTGAATTGGTCCCTCATAAGAGGTCTTaGCACATTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: CSPHKGPELVPHKRS*HILQMQFELDVKES
Trigger: GGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGACCAATTCAGGTCCCTTATGGGGTGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAAAGCACAAAGCAGGCTaGAGTGATATCTTCTACCTC +
Preference number: 2 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKKHKAG*SDIFYL
Trigger: GAGGTAGAAGATATCACTGCAGCCTGCTTTGTGCTT...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTTTCTCTCCACCTTGTTaGCCAAACTTACAAGACTTT +
Preference number: 2 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCFSPPC*PNLQDF
Trigger: AAAGTCTTGTAAGTTTGGCCAACAAGGTGGAGAGAA...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGTTGCAAGTTGGTGATTaGATACTAGTTAATCAGAGC +
Preference number: 2 (lower is better)
Translates to: GLSLVKPASSFFARTCVMLQVGD*ILVNQS
Trigger: GCTCTGATTAACTAGTATTCAATCACCAACTTGCAA...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGAGTTTTCATCCCTTATaGCCAACATGGACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKSFHPL*PTWTED
Trigger: GTCTTCTGTCCATGTTGGGCATAAGGGATGAAAACT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR GCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGTGTATTCATAATGGATaGCTTAGCCCCCACTGCAAT +
Preference number: 2 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKCIHNG*LSPHCN
Trigger: ATTGCAGTGGGGGCTAAGGCATCCATTATGAATACA...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR TCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGAGAAGAAATGTTCTTTaGAGCCCATGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKRRNVL*SPWNSK
Trigger: CTTGGAATTCCATGGGCTTCAAAGAACATTTCTTCT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 72 bp AGCGCACGCTGGGCAGGGTCTGCCATATGCACAATATaGGCGTGTAGGCTGAGCCTCAGTCCAGGGCCGAGA +
Preference number: 3 (lower is better)
Translates to: SARWAGSAICTI*ACRLSLSPGPR
Trigger: TCTCGGCCCTGGACTGAGGCTCAGCCTACACGCTCATATTGTGCATATGGCAGACCCTGCCCAGCGTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 72 bp GCAAGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTaGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCT +
Preference number: 3 (lower is better)
Translates to: ARTCVMPKSPQV*ASRGAAQLAPA
Trigger: AGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGGGACGAGCCACAATATaGTCTTCTCAGCAGACAGGA +
Preference number: 3 (lower is better)
Translates to: PQVWASRGAAQLAPAESEGRATI*SSQQTG
Trigger: TCCTGTCTGCTGAGAAGACAATATTGTGGCTCGTCC...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCCCAAGGCTGACCTTTaGCCACATAGGAGCAAGGGA +
Preference number: 3 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAPKADL*PHRSKG
Trigger: TCCCTTGCTCCTATGTGGCAAAAGGTCAGCCTTGGG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 72 bp CAGGGTCTGCCATATGCACAATATGAGCGTGTAGGCTaGGCCTCAGTCCAGGGCCGAGAAAGGCCAAAACAG +
Preference number: 3 (lower is better)
Translates to: QGLPYAQYERVG*ASVQGRERPKQ
Trigger: CTGTTTTGGCCTTTCTCGGCCCTGGACTGAGGCTCAGCCTACACGCTCATATTGTGCATATGGCAGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 72 bp GCCAAAACAGAGCTTGGTGAAAGGAGAGGCAGGAAATaGAGAGCCAGTCCTGCAGGGCCCACAGTAAAGCGA +
Preference number: 3 (lower is better)
Translates to: AKTELGERRGRK*RASPAGPTVKR
Trigger: TCGCTTTACTGTGGGCCCTGCAGGACTGGCTCTCCATTTCCTGCCTCTCCTTTCACCAAGCTCTGTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 72 bp GGAATCTACCCTAACAGGCAGGTGGGATTGGAGCCATaGGGTCAGCTGCTCCATTTGCTGTATCAAAGCGCA +
Preference number: 3 (lower is better)
Translates to: GIYPNRQVGLEP*GQLLHLLYQSA
Trigger: TGCGCTTTGATACAGCAAATGGAGCAGCTGACCTCATGGCTCCAATCCCACCTGCCTGTTAGGGTAGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 72 bp AGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATaGCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: SQPLVSLQEPVS*LSPHKCGLPEE
Trigger: CTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 72 bp AAGCACAAAGCAGGCTGCAGTGATATCTTCTACCTCTaGTGTTTGCTTCTGGGGATGCTTGCAGGCAGGTCA +
Preference number: 3 (lower is better)
Translates to: KHKAGCSDIFYL*CLLLGMLAGRS
Trigger: TGACCTGCCTGCAAGCATCCCCAGAAGCAAACAGCAGAGGTAGAAGATATCACTGCAGCCTGCTTTGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 72 bp TTCATCCCTTATGCCCAACATGGACAGAAGACAGCCTaGCACCTTTGCAAGCAAGTCCAGATTAGAGGAACG +
Preference number: 3 (lower is better)
Translates to: FIPYAQHGQKTA*HLCKQVQIRGT
Trigger: CGTTCCTCTAATCTGGACTTGCTTGCAAAGGTGCCAGGCTGTCTTCTGTCCATGTTGGGCATAAGGGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CCA 72 bp ACTTTACAGCAGGGGTGTCCCATCTTTTGGCTTCCCTaGGCCACATTGGAAGAAGAATTATCTTGGGCCACA +
Preference number: 3 (lower is better)
Translates to: TLQQGCPIFWLP*ATLEEELSWAT
Trigger: TGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATGGGACACCCCTGCTGTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGTTTTGCAAATGCAGTTaGAATTGGATGTCAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLFCKCS*NWMSRS
Trigger: ACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR TCA 72 bp GAGATAAAAAGAAGTATCATTGTTTCACCGTCCTGCTaGGCAGCACCAACTCTGTTTCTGACTCCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: EIKRSIIVSPSC*AAPTLFLTPSH
Trigger: GTGGGAGGGAGTCAGAAACAGAGTTGGTGCTGCTCAGCAGGACGGTGAAACAATGATACTTCTTTTTATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGATATTTTCAGGTTTCTaGGTTGACATGTCCCTGGCA +
Preference number: 3 (lower is better)
Translates to: GLSLVKPASSFFARTCVMIFSGF*VDMSLA
Trigger: TGCCAGGGACATGTCAACCAAGAAACCTGAAAATAT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 72 bp ATCTTGGCTCTAACCAAAAACACTCATGTGCCGCCCTaGGTCCAACAACAACCAAACAGGACTTACAGTTAT +
Preference number: 3 (lower is better)
Translates to: ILALTKNTHVPP*VQQQPNRTYSY
Trigger: ATAACTGTAAGTCCTGTTTGGTTGTTGTTGGACGCAGGGCGGCACATGAGTGTTTTTGGTTAGAGCCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 72 bp TGGTCCCTCATAAGAGGTCTTTGCACATTTTGCAAATaGAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: WSLIRGLCTFCK*SLNWMSRSPGV
Trigger: CACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAATTTCTCTCCACCTTGTaGGCCAAACTTACAAGACTT +
Preference number: 3 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKFLSTL*AKLTRL
Trigger: AAGTCTTGTAAGTTTGGCCAACAAGGTGGAGAGAAA...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAATTTTTCTCTCCACCTaGTTGGCCAAACTTACAAGA +
Preference number: 3 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRIFLST*LAKLTR
Trigger: TCTTGTAAGTTTGGCCAACAAGGTGGAGAGAAAAAT...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCATAAGGGACCTGAATaGGTCCCTCATAAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKHKGPE*VPHKRS
Trigger: AGACCTCTTATGAGGGACCAATTCAGGTCCCTTATG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR-3UTR CAA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCAAATGCAGTTTGAATaGGATGTCAAGGAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKQMQFE*DVKESR
Trigger: CCTGGACTCCTTGACATCCAATTCAAACTGCATTTG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR GCA 72 bp AACATACCACAGCTTTTAGCTCATAATGCCCATAGATaGCTTAATGAAATGCCATTCAAAACTACCTCACTG +
Preference number: 3 (lower is better)
Translates to: NIPQLLAHNAHR*LNEMPFKTTSL
Trigger: CAGTGAGGTAGTTTTGAATGGCATTTCATTAAGGCATCTATGGGCATTATGAGCTAAAAGCTGTGGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCCAGCTGCTGCTCCGTaGCCTCCTCGCCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEPAAAP*PPRRPA
Trigger: AGCTGGACGGCGAGGAGGGCACGGAGCAGCAGCTGG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCCGCAGAACCTGCCGTaGAGCTTGGCGTCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEPQNLP*SLASGD
Trigger: GTCCCCCGACGCCAAGCTGCACGGCAGGTTCTGCGG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCTGAGTAGTCTGCGGTaGCGTCCGGGCGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEALSSLR*RPGAPR
Trigger: TCGGGGAGCGCCCGGACGCCACCGCAGACTACTCAG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGTGGGCTGCTCTCAGATaGCTGCTCTTCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEWAALR*LLFKPT
Trigger: GGTGGGCTTGAAGAGCAGGCATCTGAGAGCAGCCCA...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCCGGGGGACAGGCCGCTaGGCACCTCTACAAAGTCGT +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAARGTGR*APLQSR
Trigger: ACGACTTTGTAGAGGTGCGCAGCGGCCTGTCCCCCG...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCTGAGCCGCACGCGCTaGCCAATGGTTGGCCTGACG +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEALSRTR*PMVGLT
Trigger: CGTCAGGCCAACCATTGGCCAGCGCGTGCGGCTCAG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAGAAACGGCCCAGAATaGGGGCCAGGCTGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLRNGPE*GPGCPA
Trigger: GGCCGGACAGCCTGGCCCCCATTCTGGGCCGTTTCT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAGAAGAAGTGGGCCCTaGAGCCGCGCTTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLRRSGP*SRAWRR
Trigger: CCGTCTCCAAGCGCGGCTTCAGGGCCCACTTCTTCT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCTCTGTGCTGTGCACTaGCTGGAAGCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESELCAVH*LEAFPL
Trigger: CAGAGGAAAGGCTTCCAGGCAGTGCACAGCACAGAG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCCCCCACTGTCTGCTTaGTCCAGTCTCTGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEPPLSA*SSLWLC
Trigger: ACAAAGCCAGAGACTGGACCAAGCAGACAGTGGGGG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGTATCCTCTCTGTCCTTaGGGTTGTGGCTCTTCGGAC +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEYPLCP*GCGSSD
Trigger: GTCCGAAGAGCCACAACCTCAAGGACAGAGAGGATA...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGCAGAGGGAGTTGCGTaGACGAAAGCTCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAAEGVA*TKAQLG
Trigger: GCCGAGCTGAGCTTTCGTGCACGCAACTCCCTCTGC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCGTTGCCCCCACTGTCTaGTTGGTCCAGTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAVAPTV*LVQSLA
Trigger: AGCCAGAGACTGGACCAAGCAGACAGTGGGGGCAAC...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCTTCAGCCTTCAGCCTaGCCCCGCACTCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLLQPSA*PRTLCC
Trigger: ACAGCACAGAGTGCGGGGGCAGGCTGAAGGCTGAAG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGGCCGTAGCCGTCCTCTaGCACGATCACCCAGTCACA +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLAVAVL*HDHPVT
Trigger: TGTGACTGGGTGATCGTGGCAGAGGACGGCTACGGC...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAAGGAGTCCAGGTGTaGCACGGCAAGTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAQGVQV*HGKCLQ
Trigger: TTGGAGGCACTTGCCGTGGCACACCTGGACTCCTTG...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCAGCCACCGTGGGGTCTaGTTTCTTGCTGCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAASHRGV*FLAAAE
Trigger: TTCTGCGGCAGCAAGAAACCAGACCCCACGGTGGCT...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCCCTTATGCCCAACATaGACAGAAGACAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEPLCPT*TEDSLA
Trigger: TGCCAGGCTGTCTTCTGTCCATGTTGGGCATAAGGG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTTGACGCACTCATGCTaGCACCCGCCGTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEALTHSC*HPPLSL
Trigger: CAAGGACAACGGCGGGTGTCAGCATGAGTGCGTCAA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGTCCCCTCCACACTGCTaGTCTTGTGTGCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLSPPHC*SCVHSQ
Trigger: CTGGCTGTGCACACAAGATCAGCAGTGTGGAGGGGA...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGACCGCTCGGAGCTACTTaGCCGGCGGCCGAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRPLGAT*PAAEAA
Trigger: CGCAGCCTCGGCCGCCGGGCAAGTAGCTCCGAGCGG...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCTTCCAGCTTCCTTGGTaGCAGTGTCCATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAFQLPW*QCPWLW
Trigger: CCACAGCCATGGACACTGGCACCAAGGAAGCTGGAA...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCCCAAGATGTTGCTaGTGCTGCGGAACTCCACCC +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEACPRCC*CCGTPP
Trigger: GGGTGGAGTTCCGCAGCAGCAGCAACATCTTGGGCA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGTGGGGTCTGGTTTCTTaGTGCCGCAGAAACGGCCCA +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLWGLVS*CRRNGP
Trigger: TGGGCCGTTTCTGCGGCAGCAAGAAACCAGACCCCA...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGATGGCGCGGGGCCGGCTaGGGCAGAGGGAGTTGCGTG +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRWRGAG*GRGSCV
Trigger: CACGCAACTCCCTCTGCCCCAGCCGGCCCCGCGCCA...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCGGCCAATGGTTGGCCTaGCGCCATTGTCATCTTGAC +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLGQWLA*RHCHLD
Trigger: GTCAAGATGACAATGGCGTCAGGCCAACCATTGGCC...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGGAAAGCCTTTCTTGTTaGTGGTGTCATCTGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEESLSC*WCHLCG
Trigger: TCCGCACAGATGACACCATCAACAAGAAAGGCTTTC...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGGTGGGATTGGAGCCATaGGGTCAGCTGCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLVGLEP*GQLLHL
Trigger: CAAATGGAGCAGCTGACCTCATGGCTCCAATCCCAC...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCCTGTGGTGTCTGGGCTaGTCTCAGATGCCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLLWCLG*SQMPAL
Trigger: AAGAGCAGGCATCTGAGAGCAGCCCAGACACCACAG...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCCAAGATGTTGCTGCTaGTGCGGAACTCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAPRCCC*CGTPPR
Trigger: TCTGGGTGGAGTTCCGCAGCAGCAGCAACATCTTGG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCCCTTGCCCAAGATGTTaGTGCTGCTGCGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLPCPRC*CCCGTP
Trigger: TGGAGTTCCGCAGCAGCAGCAACATCTTGGGCAAGG...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGGCGGGGGCCACCACCTaGCAGACACAGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLAGATT*QTQFLF
Trigger: AAACAAAAACTGTGTCTGGCAGGTGGTGGCCCCCGC...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCACTCATGTGCCGCCCTaGGTCCAACAACAACCAAAC +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAATHVPP*VQQQPN
Trigger: GTTTGGTTGTTGTTGGACGCAGGGCGGCACATGAGT...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTCCGGCCGGGACTCGGTaGTTACACAGGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCPAGTR*LHRAAG
Trigger: CCCAGCAGCCCTGTGTAACCACCGAGTCCCGGCCGG...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTAAAGACGGCGCACACTaGGTCGGTCGGCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCKDGAH*VGRLRP
Trigger: CGGCCGGAGCCGACCGACCCAGTGTGCGCCGTCTTT...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAACCTGCCGTGCAGCTTaGCGTCGGGGGACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQTCRAA*RRGTGR
Trigger: GCGGCCTGTCCCCCGACGCCAAGCTGCACGGCAGGT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCTATCAAAGCGCACGCTaGGCAGGGTCTGCCATATGC +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLYQSAR*AGSAIC
Trigger: GCATATGGCAGACCCTGCCCAGCGTGCGCTTTGATA...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCACCCTAACAGGCAGGTaGGATTGGAGCCATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEATLTGR*DWSHEV
Trigger: GACCTCATGGCTCCAATCCCACCTGCCTGTTAGGGT...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTCTCGCCGTCCAGCTCTaGGTAGTCTGCGGTGGCGTC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCLAVQL*VVCGGV
Trigger: GACGCCACCGCAGACTACTCAGAGCTGGACGGCGAG...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCACGTGAAACCCCTCTaGAACCGTAATCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLHVKPL*NRNPPD
Trigger: GTCTGGAGGATTACGGTTTCAGAGGGGTTTCACGTG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGACTCATCCACCTCCTTaGAAAAATTGGCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESETHPPP*KNWLQS
Trigger: GCTTTGCAGCCAATTTTTTCAAGGAGGTGGATGAGT...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGACAAGGAGAATGGTATaGAGAAGCATAGCCGGAATG +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESETRRMV*RSIAGM
Trigger: CATTCCGGCTATGCTTCTTCATACCATTCTCCTTGT...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCGTTTCACCGTCCTGCTaGGCAGCACCAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLVSPSC*AAPTLF
Trigger: AAACAGAGTTGGTGCTGCTCAGCAGGACGGTGAAAC...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTCAGAGCCGCAGAACCTaGCGTGCAGCTTGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCQSRRT*RAAWRR
Trigger: CCGACGCCAAGCTGCACGGCAGGTTCTGCGGCTCTG...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGAAGCACAAAGCAGGCTaGAGTGATATCTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEKHKAG*SDIFYL
Trigger: GAGGTAGAAGATATCACTGCAGCCTGCTTTGTGCTT...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCACAGTTCTTCCCAATaGATATGGCCTGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLHSSSQ*IWPVGL
Trigger: GAGGCCCACAGGCCATATCCATTGGGAAGAACTGTG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCGCAGTGGGAGTAAGATaGGTACCCATTTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAAVGVR*VPIWET
Trigger: GGTTTCCCAAATGGGTACCCATCTTACTCCCACTGC...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAAGAGCCGGCTGTCCGTaGAGACGAGGGGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRRAGCP*RRGAPG
Trigger: TCCCGGAGCCCCTCGTCTCCACGGACAGCCGGCTCT...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCCTGGAACTTGGTGCTaGTGTATCGGGCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAPGTWC*CIGHES
Trigger: GCTTTCATGCCCGATACACCAGCACCAAGTTCCAGG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGGGACAGAAGACAGCCTaGCACCTTTGCAAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLGQKTA*HLCKQV
Trigger: GACTTGCTTGCAAAGGTGCCAGGCTGTCTTCTGTCC...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTGTGGTTACACAGGGCTaGTGGGCATGGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCVVTQG*WAWLRR
Trigger: GCGCCTGAGCCATGCCCAGCAGCCCTGTGTAACCAC...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCAGTGTCTCATGGCCTaGTTAAAAATGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAQCLMA*LKMALW
Trigger: CCAGAGGGCCATTTTTAAGCAGGCCATGAGACACTG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGCTTCTGGGGATGCTTaGAGGCAGGTCACTGATAAT +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAASGDA*RQVTDN
Trigger: ATTATCAGTGACCTGCCTGCAAGCATCCCCAGAAGC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTCTACCTCTGCTGTTTaGTTCTGGGGATGCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEASTSAV*FWGCLQ
Trigger: CTGCAAGCATCCCCAGAAGCAAACAGCAGAGGTAGA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAACTATGTCTCCCTGACTaGGCCGCACGCGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQLCLPD*AARAGQ
Trigger: TTGGCCAGCGCGTGCGGCTCAGTCAGGGAGACATAG...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCCATCCGAATAAAACCTaGGAAACATACTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLHPNKT*ETYCCR
Trigger: CCGGCAGCAGTATGTTTCTCAGGTTTTATTCGGATG...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGAAGTGCCAAGTGTTATaGATTCTGTTTGCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESEKCQVL*ILFASW
Trigger: CCAACTTGCAAACAGAATTCATAACACTTGGCACTT...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCGGAATAGTGGATCAATaGACAGCCTCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAGIVDQ*TASLSL
Trigger: CAGAGAAAGAGAGGCTGTTCATTGATCCACTATTCC...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGTTCCAGGTAGTCATATaGACAGCTGTCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLFQVVI*TAVVPF
Trigger: GAAAGGCACGACAGCTGTGCATATGACTACCTGGAA...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCTTTCACTCTGTGGCCTaGAGTCGAAGAGATGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLFHSVA*SRRDVP
Trigger: TGGAACATCTCTTCGACTGCAGGCCACAGAGTGAAA...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAGTTACACAGGGCTGCTaGGCATGGCTCAGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQVTQGC*AWLRRG
Trigger: TCCGCGCCTGAGCCATGCCCAGCAGCCCTGTGTAAC...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCTTGACGGGGAAGGATaGTGTCTAAGAAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLLDGEG*CLRKLL
Trigger: GAGGAGTTTTCTTAGACACCATCCTTCCCCGTCAAG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTCCAGACACATTCCTTaGAAGGTCTGTAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEASRHIP*KVCSHP
Trigger: CGGATGACTACAGACCTTCCAAGGAATGTGTCTGGA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCACAGTTTTTGTTTGTaGGATACTCCTTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLHSFCL*DTPSAT
Trigger: GGTGGCCGAAGGAGTATCCCACAAACAAAAACTGTG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGTGCCGGAAGCCACCGTaGGGTCTGGTTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMCRKPP*GLVSCC
Trigger: GCAGCAAGAAACCAGACCCCACGGTGGCTTCCGGCA...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGCCACCCAGGGCTGGTaGTGGTTCCATTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRATQGW*WFHSAW
Trigger: CCAAGCTGAATGGAACCATCACCAGCCCTGGGTGGC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAAGCTAGTCACTGATTaGCTTGTTCCACAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLKLVTD*LVPQGD
Trigger: ATCGCCTTGTGGAACAAGTCAATCAGTGACTAGCTT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAGTCTTGGCTGCGGCATaGAAGGTCCCAGGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKVLAAA*KVPGLC
Trigger: GCACAGCCCTGGGACCTTGCATGCCGCAGCCAAGAC...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGTTTCCCGTTGTGTCCTaGAGGGTCTCCCCACACGCT +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMFPVVS*RVSPHA
Trigger: AGCGTGTGGGGAGACCCTGCAGGACACAACGGGAAA...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGGCCAGTAGCCGTTTCTaGACCTGCACAGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMASSRF*TCTGSS
Trigger: GGAGCTACCTGTGCAGGTGCAGAAACGGCTACTGGC...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCGCACATTCCTGGTGCTaGTCGATCTCAAACTCATTA +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLAHSWC*SISNSL
Trigger: TAATGAGTTTGAGATCGAGCAGCACCAGGAATGTGC...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTCCGCACTCTGTGCTGTaGACTGCCTGGAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCPHSVL*TAWKPF
Trigger: GAAAGGCTTCCAGGCAGTGCACAGCACAGAGTGCGG...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAATGCCCCCGCACTCTGTaGTGTGCACTGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKCPRTL*CALPGS
Trigger: GCTTCCAGGCAGTGCACAGCACAGAGTGCGGGGGCA...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCTCATAAGAGGTCTTTaGACATTTTGCAAATGCAGT +
Preference number: 4 (lower is better)
Translates to: PQVWASRGAAQLAPAESELIRGL*TFCKCS
Trigger: ACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTGCGCTGGCCAATGGTTaGCCTGACGCCATTGTCATC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCALANG*PDAIVI
Trigger: GATGACAATGGCGTCAGGCCAACCATTGGCCAGCGC...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGTCATCCACAGTCTGTTaGAGCTCGATTTCACATCCT +
Preference number: 4 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLSSTVC*SSISHP
Trigger: AGGATGTGAAATCGAGCTCCAACAGACTGTGGATGA...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAATTTGTCAGGCCAGTTaGGGCTCGCCAGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQICQAS*GSPGSP
Trigger: AGGGGACCCTGGCGAGCCCCAACTGGCCTGACAAAT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCTATTTTCAGGTTTCTTaGTTGACATGTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAAYFQVS*LTCPWQ
Trigger: CTGCCAGGGACATGTCAACCAAGAAACCTGAAAATA...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTAGGAGAGGCAGGAAATaGAGAGCCAGTCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCRRGRK*RASPAG
Trigger: CCCTGCAGGACTGGCTCTCCATTTCCTGCCTCTCCT...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAAGCTCCCGAAGGTGTTaGCGCACTCATGCTGACACC +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQSSRRC*RTHADT
Trigger: GGTGTCAGCATGAGTGCGTCAACACCTTCGGGAGCT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCAGAAGAAATGTTCTTTaGAGCCCATGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAARRNVL*SPWNSK
Trigger: CTTGGAATTCCATGGGCTTCAAAGAACATTTCTTCT...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAATATGAGCGTGTAGGCTaGGCCTCAGTCCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKYERVG*ASVQGR
Trigger: TCGGCCCTGGACTGAGGCTCAGCCTACACGCTCATA...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTTGTGCTGTGTCCTGTTaGCCCCACTGTCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCCAVSC*PHCLLG
Trigger: ACCAAGCAGACAGTGGGGGCAACAGGACACAGCACA...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGAGGCACACTTGTAGCTaGCCAGCGTGTTCACACAGC +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMRHTCS*PACSHS
Trigger: GCTGTGTGAACACGCTGGGCAGCTACAAGTGTGCCT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTGGTCTGGTTTCTTGCTaGCGCAGAAACGGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCGLVSC*RRNGPE
Trigger: TTCTGGGCCGTTTCTGCGGCAGCAAGAAACCAGACC...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCAGTTTTCATCCCTTATaGCCAACATGGACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEASFHPL*PTWTED
Trigger: GTCTTCTGTCCATGTTGGGCATAAGGGATGAAAACT...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCCTTTCCAGCTTCCTTaGTGCCAGTGTCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMPFQLP*CQCPWL
Trigger: CAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGGCTGTGCAGGAGTGTaGTATTCTCCCGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRGCAGV*YSPGHP
Trigger: AGGATGGCCGGGAGAATACCACACTCCTGCACAGCC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTTCTTCCCAATGGATATaGCCTGTGGGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCSSQWI*PVGLLL
Trigger: GAGGAGGAGGCCCACAGGCCATATCCATTGGGAAGA...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAGGGCACTCTCTTCCGTaGGGCCATCCCGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKGHSLP*GHPGLP
Trigger: TGGAAGTCCGGGATGGCCCCACGGAAGAGAGTGCCC...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGTCATCCCCAAAGCTTaGTACCCAATTAAAGCACAA +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAVIPKA*YPIKAQ
Trigger: TTGTGCTTTAATTGGGTACCAAGCTTTGGGGATGAC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGGGGTGTCCCATCTTTTaGCTTCCCTGGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMGCPIF*LPWATL
Trigger: CAATGTGGCCCAGGGAAGCCAAAAGATGGGACACCC...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 72 bp TTCATCCCAAAGGAATTCCGGTGCATGGGAGCTATCTaGGCTCTAACCAAAAACACTCATGTGCCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: FIPKEFRCMGAI*ALTKNTHVPPC
Trigger: GCAGGGCGGCACATGAGTGTTTTTGGTTAGAGCCAAGATAGCTCCCATGCACCGGAATTCCTTTGGGATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTGCCATATGCACAATATaGGCGTGTAGGCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCAICTI*ACRLSL
Trigger: GAGGCTCAGCCTACACGCTCATATTGTGCATATGGC...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCAAATTGGCCATATGGTaGCAATTGTTGAAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLKLAIW*QLLKLC
Trigger: ACACAGCTTCAACAATTGTCACCATATGGCCAATTT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAAAGGTCCCAGGGCTGTaGAGGAGTGTGGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRKVPGL*RSVVFS
Trigger: GGAGAATACCACACTCCTGCACAGCCCTGGGACCTT...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAAGAGAAGGTCTTGGCTaGGGCATGCAAGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKREGLG*GMQGPR
Trigger: CCTGGGACCTTGCATGCCGCAGCCAAGACCTTCTCT...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGGGTAGCTTCGTACGCTaGAAAGAAGCCCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMGSFVR*KEALAQ
Trigger: TTGGGCAAGGGCTTCTTTGCAGCGTACGAAGCTACC...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCACTTACAGACGTCATTaGCTTCCAGTTCAAACACTT +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEATYRRH*LPVQTL
Trigger: AAGTGTTTGAACTGGAAGGCAATGACGTCTGTAAGT...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGCCTCTTTGCAGTCATaGCCATTCTCGTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRASLQS*PFSWSQ
Trigger: CTGGCTCCACGAGAATGGGCATGACTGCAAAGAGGC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCACAGCCAGCCTCTTTaGAGTCATGCCCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMHSQPL*SHAHSR
Trigger: ACGAGAATGGGCATGACTGCAAAGAGGCTGGCTGTG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCGATGCCTTAATGAAATaGCATTCAAAACTACCTCAC +
Preference number: 4 (lower is better)
Translates to: RTCVMPKSPQVWASRGAADALMK*HSKLPH
Trigger: GTGAGGTAGTTTTGAATGGCATTTCATTAAGGCATC...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCCAAAAACACTCATGTaGCGCCCTGCGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMPKTLM*RPASNN
Trigger: GTTGTTGGACGCAGGGCGGCACATGAGTGTTTTTGG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAACAGTGTCCATGGCTGTaGTGTCTGGGCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKQCPWL*CLGCSQ
Trigger: CTGAGAGCAGCCCAGACACCACAGCCATGGACACTG...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAGGGGAGAGAAGGTCTTaGCTGCGGCATGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKGERRS*LRHARS
Trigger: GGACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCC...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGATGTTGGTCTCTGTCTaGCCGGGTGTGTTCATGCCA +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMMLVSV*PGVFMP
Trigger: TGGCATGAACACACCCGGCCAGACAGAGACCAACAT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGATGATGGTGACATGTTaGTCTCTGTCTGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMMMVTC*SLSGRV
Trigger: CACCCGGCCAGACAGAGACCAACATGTCACCATCAT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAAAGTCCCCACAAGTGTaGGCTTCCAGAGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKKSPQV*ASRGAA
Trigger: GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTT...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGACCAAGGCAGAGGCCTaGGACTTTCTGCTGAATGGA +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMTKAEA*DFLLNG
Trigger: TCCATTCAGCAGAAAGTCCCAGGCCTCTGCCTTGGT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAATCCGGGCGTAGTGCATaGTGCTGTCAAAGTCGTATG +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQSGRSA*CCQSRM
Trigger: CATACGACTTTGACAGCATCATGCACTACGCCCGGA...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAACGCCATTGTCATCTTaGCGGGGAAGGATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRTPLSS*RGRMVS
Trigger: AGACACCATCCTTCCCCGTCAAGATGACAATGGCGT...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTACACTCGTCCTTATCTaGGAAGAAGTGGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCTLVLI*EEVGPE
Trigger: TTCAGGGCCCACTTCTTCTCAGATAAGGACGAGTGT...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAACTTCAAGCCCACCTGTaGTGTGTCCTGTTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKLQAHL*CVLLPP
Trigger: TGGGGGCAACAGGACACAGCACAGGTGGGCTTGAAG...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAAGCCGTTTCTGCACCTaGACAGGTAGCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKSRFCT*TGSSRR
Trigger: CCTTCGGGAGCTACCTGTGCAGGTGCAGAAACGGCT...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCCATAATGCCCATAGATaGCTTAATGAAATGCCATTC +
Preference number: 4 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAHNAHR*LNEMPF
Trigger: GAATGGCATTTCATTAAGGCATCTATGGGCATTATG...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGGTCAGCTGCTCCATTTaGTGTATCAAAGCGCACGCT +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMVSCSI*CIKAHA
Trigger: AGCGTGCGCTTTGATACAGCAAATGGAGCAGCTGAC...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTCAGGTCACTGATAATTaGAAGCACCAAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCQVTDN*KHQGRG
Trigger: GCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTG...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGTGCTCGCACCCGCCGTaGTCTGGCCAGGAACACTCA +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKCSHPP*SGQEHS
Trigger: TGAGTGTTCCTGGCCAGATCACGGCGGGTGCGAGCA...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCTGGTGTATCGGGCATaGAAGCCTTTCTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMLVYRA*KPFLLM
Trigger: CATCAACAAGAAAGGCTTTCATGCCCGATACACCAG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAACTGCAAAGAAGCCCTTaGCCAAGATGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKLQRSP*PRCCCC
Trigger: GCAGCAGCAACATCTTGGGCAAGGGCTTCTTTGCAG...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAATCGAAACTCCCTCTGTaGTCACTGCTCACTGTGATG +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQSKLPL*SLLTVM
Trigger: CATCACAGTGAGCAGTGAGCACAGAGGGAGTTTCGA...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGTTAAAAATGGCCCTCTaGCTCCCAGTGAAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMLKMAL*LPVKFP
Trigger: AGGGAACTTCACTGGGAGCCAGAGGGCCATTTTTAA...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGAATGGATATGGCCTGTaGGCCTCCTCCTCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKNGYGL*ASSSAP
Trigger: GGGCGCCGAGGAGGAGGCCCACAGGCCATATCCATT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGTGAGTTTCACTCTGTaGCCTGCAGTCGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRVSFTL*PAVEEM
Trigger: CATCTCTTCGACTGCAGGCCACAGAGTGAAACTCAC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGGGGAATAGAGCTCTTTaGTCTGCACTTCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMGNRAL*SALQPS
Trigger: TGAAGGCTGAAGTGCAGACCAAAGAGCTCTATTCCC...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAGCCTTTCCTCTGCACTaGGGCATCCGAATAAAACCT +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKAFPLH*GIRIKP
Trigger: AGGTTTTATTCGGATGCCTCAGTGCAGAGGAAAGGC...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAACAAGAACCTGTGTCATaGCTAAGTCCCCACAAGTGT +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQQEPVS*LSPHKC
Trigger: ACACTTGTGGGGACTTAGGCATGACACAGGTTCTTG...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGGATATCTTCTACCTCTaGTGTTTGCTTCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMDIFYL*CLLLGM
Trigger: CATCCCCAGAAGCAAACAGCAGAGGTAGAAGATATC...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTGCTTGGTCCAGTCTCTaGCTTTGTCAATGTGAAACA +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCAWSSL*LCQCET
Trigger: TGTTTCACATTGACAAAGCCAGAGACTGGACCAAGC...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCTGTCCTTGAGGTTGTaGCTCTTCGGACCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKLSLRL*LFGPGE
Trigger: CTCCCCGGGTCCGAAGAGCCACAACCTCAAGGACAG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAAGTCATCCGGATAGTTaGGAGATTGAATCTGACCGG +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQSHPDS*EIESDR
Trigger: CCGGTCAGATTCAATCTCCCAACTATCCGGATGACT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGGCACCCGCCGTGATCTaGCCAGGAACACTCATCCAC +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKAPAVI*PGTLIH
Trigger: GTGGATGAGTGTTCCTGGCCAGATCACGGCGGGTGC...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 72 bp TGTCGGGCCATATTCAAAGCCGTCCTGGGCCAAGGGTaGGACAAGCTTGCTTTAGAGAGAAATTGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: CRAIFKAVLGQG*DKLALERNCKV
Trigger: TACTTTACAATTTCTCTCTAAAGCAAGCTTGTCCAACCCTTGGCCCAGGACGGCTTTGAATATGGCCCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCTGGCTTTGTCAATGTaGAACAGCTTCAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMLALSM*NSFKSS
Trigger: AGATGACTTGAAGCTGTTTCACATTGACAAAGCCAG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTAAGAAATTATACTCCTaGCCTGGCTGGATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCKKLYS*PGWMFS
Trigger: GGAAAACATCCAGCCAGGTCAGGAGTATAATTTCTT...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAAAGGTAAGTCCCACGTaGAACCCCTCTGAAACCGTA +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKKVSPT*NPSETV
Trigger: TACGGTTTCAGAGGGGTTTCACGTGGGACTTACCTT...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAACATCCTGGAACTTGGTaGTGGTGTATCGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKHPGTW*WCIGHE
Trigger: TTCATGCCCGATACACCAGCACCAAGTTCCAGGATG...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGACACAGTCCTCTGGTaGCACATTCTGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRDTVLW*HILICK
Trigger: TTTACAGATCAGAATGTGGCACCAGAGGACTGTGTC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGGGTCTCCCCACACGCTaGGCATTTGTACAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKGLPTR*AFVQLP
Trigger: CGGAAGCTGTACAAATGCCCAGCGTGTGGGGAGACC...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAAGCTTCTCTTTTCTGTaGATACGTCACACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQSFSFL*IRHTEG
Trigger: GCCTTCTGTGTGACGTATCCACAGAAAAGAGAAGCT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 72 bp CTCATAAGAGGTCTTTGCACATTTTGCAAATGCAGTTaGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGG +
Preference number: 4 (lower is better)
Translates to: LIRGLCTFCKCS*NWMSRSPGVPR
Trigger: CCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAATGTGCAAAGACCTCTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAACACCAACTCTGTTTCTaGCTCCCTCCCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKHQLCF*LPPTFL
Trigger: TAGAAAAGTGGGAGGGAGTCAGAAACAGAGTTGGTG...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAACTAACAATACCAATCTaGAAGCTATCAAAGGGACCC +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQLTIPI*KLSKGP
Trigger: GGGTCCCTTTGATAGCTTTCAGATTGGTATTGTTAG...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGGGCCGGGTGTGTTCATaGCAAAACCCAACCACATGG +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKGRVCS*QNPTTW
Trigger: CCATGTGGTTGGGTTTTGGCATGAACACACCCGGCC...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAACACTATTTCTTCATGTaGAGGGCATCCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKHYFFM*RASWNL
Trigger: CAAGTTCCAGGATGCCCTGCACATGAAGAAATAGTG...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAATGTATTCATAATGGATaGCTTAGCCCCCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQCIHNG*LSPHCN
Trigger: ATTGCAGTGGGGGCTAAGGCATCCATTATGAATACA...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAATTATACTCCTGACCTaGCTGGATGTTTTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRIILLT*LDVFPD
Trigger: ATCAGGGAAAACATCCAGCCAGGTCAGGAGTATAAT...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGTTCTCTCCACCTTGTTaGCCAAACTTACAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GLSLVKPASSFFARTCVMFSPPC*PNLQDF
Trigger: AAAGTCTTGTAAGTTTGGCCAACAAGGTGGAGAGAA...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAAGCCATGAGGTCAGCTaGTCCATTTGCTGTATCAAA +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKSHEVS*SICCIK
Trigger: TTTGATACAGCAAATGGAGCAGCTGACCTCATGGCT...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGTACGATCTTTTCCCCTaGGGTGACCGAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKYDLFP*GDRDPP
Trigger: TGGAGGATCTCGGTCACCCCAGGGGAAAAGATCGTA...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAATTCCCTGGGCCACATTaGAAGAAGAATTATCTTGGG +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKFPGPH*KKNYLG
Trigger: CCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAA...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCATCCGTCCTTTCTATaGAGGTCACACAGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKHPSFL*RSHRCA
Trigger: AGCACACCTGTGTGACCTTCATAGAAAGGACGGATG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAATATGCACAGCTGTCGTaGCTTTCAATCTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKYAQLS*LSISKA
Trigger: AGCTTTTGAGATTGAAAGGCACGACAGCTGTGCATA...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGACTGCTGATCTTGTGTaGACAGCCAGCCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKTADLV*TASLFA
Trigger: TGCAAAGAGGCTGGCTGTGCACACAAGATCAGCAGT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCCAAAGGAATTCCGGTaGATGGGAGCTATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKPKEFR*MGAILA
Trigger: AGCCAAGATAGCTCCCATGCACCGGAATTCCTTTGG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAACCCATTGTTGCAAATTaGCCATATGGTGACAATTGT +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKPIVAN*PYGDNC
Trigger: ACAATTGTCACCATATGGCCAATTTGCAACAATGGG...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTGAAGAAGAATTATCTTaGGCCACACATAAAATACAC +
Preference number: 4 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCEEELS*ATHKIH
Trigger: GTGTATTTTATGTGTGGCCCAAGATAATTCTTCTTC...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
3UTR CAA 72 bp GTTGTCCTAAGACAATTCTCTGAACTAAAACTATTCTaGCAACTCACTGTCATCCCCAAAGCTTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: VVLRQFSELKLF*QLTVIPKAWYP
Trigger: TGGGTACCAAGCTTTGGGGATGACAGTGAGTTGCAAGAATAGTTTTAGTTCAGAGAATTGTCTTAGGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR TCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAATTGCAAGTTGGTGATTaGATACTAGTTAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKLQVGD*ILVNQS
Trigger: GCTCTGATTAACTAGTATTCAATCACCAACTTGCAA...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAAAAATGCAGTTTGAATTaGATGTCAAGGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKKCSLN*MSRSPG
Trigger: ACCTGGACTCCTTGACATCCAATTCAAACTGCATTT...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGGGACTTTCTGCTGAATaGACTCTCTCTAGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKGLSAE*TLSSEA
Trigger: GGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCC...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR GCA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAATGCACATTTTGCAAATaGAGTTTGAATTGGATGTCA +
Preference number: 4 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKCTFCK*SLNWMS
Trigger: TGACATCCAATTCAAACTGCATTTGCAAAATGTGCA...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGAGATGGGTACCCATTTaGGAAACCAGGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKRWVPI*ETRCRK
Trigger: TTTTCTGCACCTGGTTTCCCAAATGGGTACCCATCT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CCA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGAATGACTCTGAGAAATaGCTTTGTGGTCTCCTAACT +
Preference number: 4 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKNDSEK*LCGLLT
Trigger: AGTTAGGAGACCACAAAGCCATTTCTCAGAGTCATT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp GCTGCTCCGTGCCCTCCTCGCCGTCCAGCTCTGAGTAGTCTGCGGTaGCGTCCGGGCGCTCCCCGAGTCCCCCGGCGCCGCGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: AAPCPPRRPALSSLR*RPGAPRVPRRREAA
Trigger: CGCTGCCTCGCGGCGCCGGGGGACTCGGGGAGCGCCCGGACGCCACCGCAGACTACTCAGAGCTGGACGGCGAGGAGGGCACGGAGCAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 90 bp ACTGGGTCGGTCGGCTCCGGCCGGGACTCGGTGGTTACACAGGGCTaGTGGGCATGGCTCAGGCGCGGAGCAAGCGGAGCGCGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: TGSVGSGRDSVVTQG*WAWLRRGASGARRP
Trigger: GGGGCGCCGCGCTCCGCTTGCTCCGCGCCTGAGCCATGCCCAGCAGCCCTGTGTAACCACCGAGTCCCGGCCGGAGCCGACCGACCCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 90 bp GAAAGACGGCGCACACTGGGTCGGTCGGCTCCGGCCGGGACTCGGTaGTTACACAGGGCTGCTGGGCATGGCTCAGGCGCGGAGCAAGCG +
Preference number: 5 (lower is better)
Translates to: ERRRTLGRSAPAGTR*LHRAAGHGSGAEQA
Trigger: CGCTTGCTCCGCGCCTGAGCCATGCCCAGCAGCCCTGTGTAACCACCGAGTCCCGGCCGGAGCCGACCGACCCAGTGTGCGCCGTCTTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 90 bp AGTTGCGTGCACGAAAGCTCAGCTCGGCCGAAAGACGGCGCACACTaGGTCGGTCGGCTCCGGCCGGGACTCGGTGGTTACACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SCVHESSARPKDGAH*VGRLRPGLGGYTGL
Trigger: CAGCCCTGTGTAACCACCGAGTCCCGGCCGGAGCCGACCGACCCAGTGTGCGCCGTCTTTCGGCCGAGCTGAGCTTTCGTGCACGCAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 90 bp CAGCGGCTTTGCAAGGGTCGTGGTAATGCTCCAGCTGCTGCTCCGTaGCCTCCTCGCCGTCCAGCTCTGAGTAGTCTGCGGTGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: QRLCKGRGNAPAAAP*PPRRPALSSLRWRP
Trigger: CGGACGCCACCGCAGACTACTCAGAGCTGGACGGCGAGGAGGGCACGGAGCAGCAGCTGGAGCATTACCACGACCCTTGCAAAGCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 90 bp GAAACATACTGCTGCCGGAAGCCACCGTGGGGTCTGGTTTCTTGCTaGCGCAGAAACGGCCCAGAATGGGGGCCAGGCTGTCCGGCCCGT +
Preference number: 5 (lower is better)
Translates to: ETYCCRKPPWGLVSC*RRNGPEWGPGCPAR
Trigger: ACGGGCCGGACAGCCTGGCCCCCATTCTGGGCCGTTTCTGCGGCAGCAAGAAACCAGACCCCACGGTGGCTTCCGGCAGCAGTATGTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS GCA 90 bp GTTGTGGCTCTTCGGACCCGGGGAGAGAAGGTCTTGGCTGCGGCATaGAAGGTCCCAGGGCTGTGCAGGAGTGTGGTATTCTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: VVALRTRGEKVLAAA*KVPGLCRSVVFSRP
Trigger: TGGCCGGGAGAATACCACACTCCTGCACAGCCCTGGGACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCCGGGTCCGAAGAGCCACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp CCCGGCCATCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATGGCTGTaGTGTCTGGGCTGCTCTCAGATGCCTGCTCTTCAAGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: PGHPFQLPWCQCPWL*CLGCSQMPALQAHL
Trigger: CAGGTGGGCTTGAAGAGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGATGGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp CTGTCCTTGAGGTTGTGGCTCTTCGGACCCGGGGAGAGAAGGTCTTaGCTGCGGCATGCAAGGTCCCAGGGCTGTGCAGGAGTGTGGTAT +
Preference number: 5 (lower is better)
Translates to: LSLRLWLFGPGERRS*LRHARSQGCAGVWY
Trigger: ATACCACACTCCTGCACAGCCCTGGGACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCCGGGTCCGAAGAGCCACAACCTCAAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp AGAACCTGTGTCATGCCTAAGTCCCCACAAGTGTGGGCTTCCAGAGGAGCGGCCCTGGGGCAGAGGGAGTaGCGTGCACGAAAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RTCVMPKSPQVWASRGAALGQRE*RARKLS
Trigger: GCTGAGCTTTCGTGCACGCAACTCCCTCTGCCCCAG...GGCCGCTCCTCTGGAAGCCCACACTTGTGGGGACTTAGGCATGACACAGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGCCCTGAAGCCGCGCTaGGAGACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAALKPR*ETVLSD
Trigger: GTCCGACAACACCGTCTCCAAGCGCGGCTTCAGGGC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS GCA 90 bp CAAGTGCTCATCAGGTGGAAGCCAGTGTCCCACCCCAGGTACCTGTaGTGTGCACTGCCTGGAAGCCTTTCCTCTGCACTGAGGCATCCG +
Preference number: 5 (lower is better)
Translates to: QVLIRWKPVSHPRYL*CALPGSLSSALRHP
Trigger: CGGATGCCTCAGTGCAGAGGAAAGGCTTCCAGGCAGTGCACAGCACAGGTACCTGGGGTGGGACACTGGCTTCCACCTGATGAGCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CCA 90 bp CCCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATGGCTGTGGTGTCTaGGCTGCTCTCAGATGCCTGCTCTTCAAGCCCACCTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PLSSFLGASVHGCGV*AALRCLLFKPTCAV
Trigger: CACAGCACAGGTGGGCTTGAAGAGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS CCA 90 bp TCTGGCTCCCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATGGCTGTaGTGTCTGGGCTGCTCTCAGATGCCTGCTCTTCAAGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: SGSPFQLPWCQCPWL*CLGCSQMPALQAHL
Trigger: CAGGTGGGCTTGAAGAGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGGGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS-3UTR CAA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAGCCGCTCGGAGCTACTaGCCCGGCGGCCGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQAARSY*PGGRGC
Trigger: GCAGCCTCGGCCGCCGGGCAAGTAGCTCCGAGCGGC...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCTCTCTGTCCTTGAGGTaGTGGCTCTTCGGACCCGGG +
Preference number: 5 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLSLSLR*WLFGPG
Trigger: CCCGGGTCCGAAGAGCCACAACCTCAAGGACAGAGA...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp ATCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATGGCTGTGGTGTCTaGGCTGCTCTCAGATGCCTGCTCTTCAAGCCCACCTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: ILSSFLGASVHGCGV*AALRCLLFKPTCAV
Trigger: CACAGCACAGGTGGGCTTGAAGAGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp TATTCTCCCGGCCATCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATaGCTGTGGTGTCTGGGCTGCTCTCAGATGCCTGCTCTTCAAGCC +
Preference number: 5 (lower is better)
Translates to: YSPGHPFQLPWCQCP*LWCLGCSQMPALQA
Trigger: GGCTTGAAGAGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGATGGCCGGGAGAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGCACAGCCAGCCTCTTaGCAGTCATGCCCATTCTCG +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAAQPAS*QSCPFS
Trigger: CGAGAATGGGCATGACTGCAAAGAGGCTGGCTGTGC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGGGGGTGTCCCATCTTTaGGCTTCCCTGGGCCACATT +
Preference number: 5 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLGVSHL*ASLGHI
Trigger: AATGTGGCCCAGGGAAGCCAAAAGATGGGACACCCC...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGATGATGGTGACATGTaGGTCTCTGTCTGGCCGGGT +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEADDGDM*VSVWPG
Trigger: ACCCGGCCAGACAGAGACCAACATGTCACCATCATC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCGCTGCAAAGAAGCCCTaGCCCAAGATGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAAAKKP*PKMLLL
Trigger: CAGCAGCAACATCTTGGGCAAGGGCTTCTTTGCAGC...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGAGACACAGTTTTTGTTaGTGGGATACTCCTTCGGCC +
Preference number: 5 (lower is better)
Translates to: PQVWASRGAAQLAPAESERHSFC*WDTPSA
Trigger: GGCCGAAGGAGTATCCCACAAACAAAAACTGTGTCT...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAAACCTGCCGTGCAGCTaGGCGTCGGGGGACAGGCCG +
Preference number: 5 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQNLPCS*ASGDRP
Trigger: CGGCCTGTCCCCCGACGCCAAGCTGCACGGCAGGTT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCACAAGTGTGGGCTTCCAGAGGAGCGGCCCAGCTAGCCCCAGCTGAATCAGAGCATAAGGGACCTGAATaGGTCCCTCATAAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PQVWASRGAAQLAPAESEHKGPE*VPHKRS
Trigger: AGACCTCTTATGAGGGACCAATTCAGGTCCCTTATG...CTCTGATTCAGCTGGGGCTAGCTGGGCCGCTCCTCTGGAAGCCCACACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 90 bp AGCCGCACGCGCTGGCCAATGGTTGGCCTGACGCCATTGTCATCTTaGCGGGGAAGGATGGTGTCTAAGAAAACTCCTCTTGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SRTRWPMVGLTPLSS*RGRMVSKKTPLEKV
Trigger: CACCTTCTCAAGAGGAGTTTTCTTAGACACCATCCTTCCCCGTCAAGATGACAATGGCGTCAGGCCAACCATTGGCCAGCGCGTGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS TCA 90 bp CCCGCACTCTGTGCTGTGCACTGCCTGGAAGCCTTTCCTCTGCACTaGGGCATCCGAATAAAACCTGAGAAACATACTGCTGCCGGAAGC +
Preference number: 5 (lower is better)
Translates to: PALCAVHCLEAFPLH*GIRIKPEKHTAAGS
Trigger: GCTTCCGGCAGCAGTATGTTTCTCAGGTTTTATTCGGATGCCTCAGTGCAGAGGAAAGGCTTCCAGGCAGTGCACAGCACAGAGTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS GCA 90 bp GCCATGATCTGGTGCTCTGGCATCAGAGACCCTGCTGTTGACCTGTaGACTCTGCTGCACGACCCTTTAGTACAAATGACGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: AMIWCSGIRDPAVDL*TLLHDPLVQMTLVR
Trigger: CCTCACCAGCGTCATTTGTACTAAAGGGTCGTGCAGCAGAGTGCACAGGTCAACAGCAGGGTCTCTGATGCCAGAGCACCAGATCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS TCA 90 bp CTGCCTGGAAGCCTTTCCTCTGCACTGAGGCATCCGAATAAAACCTaGGAAACATACTGCTGCCGGAAGCCACCGTGGGGTCTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LPGSLSSALRHPNKT*ETYCCRKPPWGLVS
Trigger: AGAAACCAGACCCCACGGTGGCTTCCGGCAGCAGTATGTTTCTCAGGTTTTATTCGGATGCCTCAGTGCAGAGGAAAGGCTTCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS TCA 90 bp GAGTTGGGCCATGATCTGGTGCTCTGGCATCAGAGACCCTGCTGTTaGCCTGTGCACTCTGCTGCACGACCCTTTAGTACAAATGACGCT +
Preference number: 5 (lower is better)
Translates to: ELGHDLVLWHQRPCC*PVHSAARPFSTNDA
Trigger: AGCGTCATTTGTACTAAAGGGTCGTGCAGCAGAGTGCACAGGTCAACAGCAGGGTCTCTGATGCCAGAGCACCAGATCATGGCCCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS TCA 90 bp CCAGGTACCTGTGCTGTGCACTGCCTGGAAGCCTTTCCTCTGCACTaGGGCATCCGAATAAAACCTGAGAAACATACTGCTGCCGGAAGC +
Preference number: 5 (lower is better)
Translates to: PGTCAVHCLEAFPLH*GIRIKPEKHTAAGS
Trigger: GCTTCCGGCAGCAGTATGTTTCTCAGGTTTTATTCGGATGCCTCAGTGCAGAGGAAAGGCTTCCAGGCAGTGCACAGCACAGGTACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS GCA 90 bp ATGACTTGCCCAAGGTCACATACTGAGAGTTGGGCCATGATCTGGTaGTCTGGCATCAGAGACCCTGCTGTTGACCTGTGCACTCTGCTG +
Preference number: 5 (lower is better)
Translates to: MTCPRSHTESWAMIW*SGIRDPAVDLCTLL
Trigger: CAGCAGAGTGCACAGGTCAACAGCAGGGTCTCTGATGCCAGAGCACCAGATCATGGCCCAACTCTCAGTATGTGACCTTGGGCAAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CCA 90 bp CAGATGACTTGCCCAAGGTCACATACTGAGAGTTGGGCCATGATCTaGTGCTCTGGCATCAGAGACCCTGCTGTTGACCTGTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: QMTCPRSHTESWAMI*CSGIRDPAVDLCTL
Trigger: CAGAGTGCACAGGTCAACAGCAGGGTCTCTGATGCCAGAGCACCAGATCATGGCCCAACTCTCAGTATGTGACCTTGGGCAAGTCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCATATCCTCTCTGTCCTaGAGGTTGTGGCTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLISSLS*RLWLFG
Trigger: TCCGAAGAGCCACAACCTCAAGGACAGAGAGGATAT...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGCTAAGAAAACTCCTCTaGAGAAGGTGTTCCGGGCGT +
Preference number: 5 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLLRKLL*RRCSGR
Trigger: ACGCCCGGAACACCTTCTCAAGAGGAGTTTTCTTAG...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGGCAAAGCCCGCTTTATaGATAGAGCCATCGGACACA +
Preference number: 5 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLAKPAL*IEPSDT
Trigger: TGTGTCCGATGGCTCTATCAATAAAGCGGGCTTTGC...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCGGACGAGCCACAATATaGTCTTCTCAGCAGACAGGA +
Preference number: 5 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLGRATI*SSQQTG
Trigger: TCCTGTCTGCTGAGAAGACAATATTGTGGCTCGTCC...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCTGTGCTGTGTCCTGTaGCCCCCACTGTCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GLSLVKPASSFFARTCVMLCCVL*PPLSAW
Trigger: CCAAGCAGACAGTGGGGGCAACAGGACACAGCACAG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTTCATCCACAGTCTGTaGGAGCTCGATTTCACATCC +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAFIHSL*ELDFTS
Trigger: GGATGTGAAATCGAGCTCCAACAGACTGTGGATGAA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCATGGTTCCATTCAGCTaGGTAATGAAACCGCCACAG +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAMVPFS*VMKPPQ
Trigger: CTGTGGCGGTTTCATTACCAAGCTGAATGGAACCAT...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGTTTCAGGTTTCTTGGTaGACATGTCCCTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLFQVSW*TCPWQR
Trigger: TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAA...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp CTTCAAGCCCACCTGTGCTGTGTCCTGTTGCCCCCACTGTCTGCTTaGTCCAGTCTCTGGCTTTGTCAATGTGAAACAGCTTCAAGTCAT +
Preference number: 5 (lower is better)
Translates to: LQAHLCCVLLPPLSA*SSLWLCQCETASSH
Trigger: ATGACTTGAAGCTGTTTCACATTGACAAAGCCAGAGACTGGACCAAGCAGACAGTGGGGGCAACAGGACACAGCACAGGTGGGCTTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCCAAATGCAGTTTGAATaGGATGTCAAGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLQMQFE*DVKESR
Trigger: CCTGGACTCCTTGACATCCAATTCAAACTGCATTTG...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 90 bp CCGCCTTGCTTTTGGTCCAGCAAGTGGCCCTATGAAGTAGTTACATaGGCTATTGCTACAATGACCACACTGCAGATGAGAGAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PPCFWSSKWPYEVVT*AIATMTTLQMREQG
Trigger: CCCCTGCTCTCTCATCTGCAGTGTGGTCATTGTAGCAATAGCTCATGTAACTACTTCATAGGGCCACTTGCTGGACCAAAAGCAAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS GCA 90 bp CGCTTTACAGGTGAGGAAAATGAGGCTCATCGCTGTCAGATGACTTaGCCAAGGTCACATACTGAGAGTTGGGCCATGATCTGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: RFTGEENEAHRCQMT*PRSHTESWAMIWCS
Trigger: AGAGCACCAGATCATGGCCCAACTCTCAGTATGTGACCTTGGGCAAGTCATCTGACAGCGATGAGCCTCATTTTCCTCACCTGTAAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CCA 90 bp TCCTCCAGACACATTCCTTGGAAGGTCTGTAGTCATCCGGATAGTTaGGAGATTGAATCTGACCGGCATCTTTGTTCATGTCTCCCCCGC +
Preference number: 5 (lower is better)
Translates to: SSRHIPWKVCSHPDS*EIESDRHLCSCLPR
Trigger: GCGGGGGAGACATGAACAAAGATGCCGGTCAGATTCAATCTCCCAACTATCCGGATGACTACAGACCTTCCAAGGAATGTGTCTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS-3UTR CAA 90 bp CTGGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTACTTACAGACGTCATaGCCTTCCAGTTCAAACACT +
Preference number: 5 (lower is better)
Translates to: LGMLAGRSLIIGSTKAEAYLQTS*PSSSNT
Trigger: AGTGTTTGAACTGGAAGGCAATGACGTCTGTAAGTA...GGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCTTTCTCTCCACCTTGTaGGCCAAACTTACAAGACTT +
Preference number: 5 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLFLSTL*AKLTRL
Trigger: AAGTCTTGTAAGTTTGGCCAACAAGGTGGAGAGAAA...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp CTGTGCTGTGTCCTGTTGCCCCCACTGTCTGCTTGGTCCAGTCTCTaGCTTTGTCAATGTGAAACAGCTTCAAGTCATCTTCATCTAAGG +
Preference number: 5 (lower is better)
Translates to: LCCVLLPPLSAWSSL*LCQCETASSHLHLR
Trigger: CCTTAGATGAAGATGACTTGAAGCTGTTTCACATTGACAAAGCCAGAGACTGGACCAAGCAGACAGTGGGGGCAACAGGACACAGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS-3UTR CAA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGACAGAAAAGTTTCCCGTaGTGTCCTGCAGGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRQKSFP*CPAGSP
Trigger: GGGAGACCCTGCAGGACACAACGGGAAACTTTTCTG...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAACCCAAGGCTGACCTTTaGCCACATAGGAGCAAGGGA +
Preference number: 5 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQPKADL*PHRSKG
Trigger: TCCCTTGCTCCTATGTGGCAAAAGGTCAGCCTTGGG...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGGTCAGCTGCTCCATTaGCTGTATCAAAGCGCACGC +
Preference number: 5 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRGQLLH*LYQSAR
Trigger: GCGTGCGCTTTGATACAGCAAATGGAGCAGCTGACC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 90 bp ATCACACAGCTTCTCTCTCACTTAGGGCTAAGAGCCAGCAAGGGCTaGGTGCCCACTCTGTCGGCAGCTGTTTTAAATGCTTTACAAGTA +
Preference number: 5 (lower is better)
Translates to: ITQLLSHLGLRASKG*VPTLSAAVLNALQV
Trigger: TACTTGTAAAGCATTTAAAACAGCTGCCGACAGAGTGGGCACTCAGCCCTTGCTGGCTCTTAGCCCTAAGTGAGAGAGAAGCTGTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS TCA 90 bp AGGGTCTCAACCTCCGCCTTGCTTTTGGTCCAGCAAGTGGCCCTATaGAGTAGTTACATGAGCTATTGCTACAATGACCACACTGCAGAT +
Preference number: 5 (lower is better)
Translates to: RVSTSALLLVQQVAL*SSYMSYCYNDHTAD
Trigger: ATCTGCAGTGTGGTCATTGTAGCAATAGCTCATGTAACTACTTCATAGGGCCACTTGCTGGACCAAAAGCAAGGCGGAGGTTGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS GCA 90 bp GGCAGCACCCTCATGGTGGCTGACTCTCGCCGAGTGTTTATTCCATaGCAAGCATTTATGCGCATTTTCTCTCTTACTTCTGGTGATGAT +
Preference number: 5 (lower is better)
Translates to: GSTLMVADSRRVFIP*QAFMRIFSLTSGDD
Trigger: ATCATCACCAGAAGTAAGAGAGAAAATGCGCATAAATGCTTGGCATGGAATAAACACTCGGCGAGAGTCAGCCACCATGAGGGTGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS-3UTR CAA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAGACGCCATTGTCATCTaGACGGGGAAGGATGGTGTC +
Preference number: 5 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKDAIVI*TGKDGV
Trigger: GACACCATCCTTCCCCGTCAAGATGACAATGGCGTC...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAGTACAGCTTCCGGGCTaGAGCTATGTCTCCCTGACT +
Preference number: 5 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKVQLPG*SYVSLT
Trigger: AGTCAGGGAGACATAGCTCAAGCCCGGAAGCTGTAC...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGCAGAGGCCTGGGACTTTCTGCTGAATGGACTCTCTCTAGTGAAGCCAGCCTCTTTTGCAAATGCAGTTaGAATTGGATGTCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: GRGLGLSAEWTLSSEASLFCKCS*NWMSRS
Trigger: ACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA...GAGGCTGGCTTCACTAGAGAGAGTCCATTCAGCAGAAAGTCCCAGGCCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGGGATGCTTGCAGGCAGGTCACTGATAATTGGAAGCACCAAGGCAGAGGCCTGAGGTCTTTGCACATTTaGCAAATGCAGTTTGAATTG +
Preference number: 5 (lower is better)
Translates to: GDACRQVTDNWKHQGRGLRSLHI*QMQFEL
Trigger: CAATTCAAACTGCATTTGCAAAATGTGCAAAGACCT...CAGGCCTCTGCCTTGGTGCTTCCAATTATCAGTGACCTGCCTGCAAGCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 90 bp CTGTCGTGCCTTTCAATCTCAAAAGCTTGGAAGGTAAGTCCCACGTaGAACCCCTCTGAAACCGTAATCCTCCAGACACATTCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LSCLSISKAWKVSPT*NPSETVILQTHSLE
Trigger: TTCCAAGGAATGTGTCTGGAGGATTACGGTTTCAGAGGGGTTTCACGTGGGACTTACCTTCCAAGCTTTTGAGATTGAAAGGCACGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS-3UTR CAA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCGGGGAGAGAAGGTCTaGGCTGCGGCATGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKRGEKV*AAACKV
Trigger: GACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCCG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGCGGATAGTTGGGAGATaGAATCTGACCGGCATCTTT +
Preference number: 5 (lower is better)
Translates to: GLSLVKPASSFFARTCVMRIVGR*NLTGIF
Trigger: AAAGATGCCGGTCAGATTCAATCTCCCAACTATCCG...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTCAGCCTCTAGTTTCTTaGCAAGAACCTGTGTCATGC +
Preference number: 5 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCQPLVS*QEPVSC
Trigger: GCATGACACAGGTTCTTGCAAAGAAACTAGAGGCTG...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 90 bp TTCAATCTCAAAAGCTTGGAAGGTAAGTCCCACGTGAAACCCCTCTaGAACCGTAATCCTCCAGACACATTCCTTGGAAGGTCTGTAGTC +
Preference number: 5 (lower is better)
Translates to: FNLKSLEGKSHVKPL*NRNPPDTFLGRSVV
Trigger: GACTACAGACCTTCCAAGGAATGTGTCTGGAGGATTACGGTTTCAGAGGGGTTTCACGTGGGACTTACCTTCCAAGCTTTTGAGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS-3UTR CAA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTTGCCAGACACAGTTTTaGTTTGTGGGATACTCCTTC +
Preference number: 5 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCCQTQF*FVGYSF
Trigger: GAAGGAGTATCCCACAAACAAAAACTGTGTCTGGCA...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGTGCATGGGAGCTATCTaGGCTCTAACCAAAAACACT +
Preference number: 5 (lower is better)
Translates to: GLSLVKPASSFFARTCVMCMGAI*ALTKNT
Trigger: AGTGTTTTTGGTTAGAGCCAAGATAGCTCCCATGCA...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 90 bp TCGGAACAGGTTGGTGAGAAGTGTAGCAAGCAGATTGATGTTTTCTaGCTAACAAAAGCACAAGTAGGACCTGGGCATTTGTACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SEQVGEKCSKQIDVF*LTKAQVGPGHLYSF
Trigger: GAAGCTGTACAAATGCCCAGGTCCTACTTGTGCTTTTGTTAGCCAGAAAACATCAATCTGCTTGCTACACTTCTCACCAACCTGTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS-3UTR CAA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGATTCAATCTCAAAAGCTaGGAAGGTAAGTCCCACGTG +
Preference number: 5 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRFNLKS*EGKSHV
Trigger: CACGTGGGACTTACCTTCCAAGCTTTTGAGATTGAA...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCACAATATTGTCTTCTCAGCAGACAGGACTCTCGCCAGCAAATGTTCTGCTGTATAAGAGTCCCATTGTaGCAAATTGGCCATATGGTG +
Preference number: 5 (lower is better)
Translates to: PQYCLLSRQDSRQQMFCCIRVPL*QIGHMV
Trigger: CACCATATGGCCAATTTGCAACAATGGGACTCTTAT...ACAGCAGAACATTTGCTGGCGAGAGTCCTGTCTGCTGAGAAGACAATATTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAAAGAAATTCTACCTCTGCTGTTaGCTTCTGGGGATGCTTGCA +
Preference number: 5 (lower is better)
Translates to: PSIFSGFLVDMSLAERKKFYLCC*LLGMLA
Trigger: TGCAAGCATCCCCAGAAGCAAACAGCAGAGGTAGAA...TTTCTTTCTCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAAATATTTTCAGGTTTCTaGGTTGACATGTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQIFSGF*VDMSLA
Trigger: TGCCAGGGACATGTCAACCAAGAAACCTGAAAATAT...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTTGCAAATGCAGTTTGAATTGGATGTCAAGGAGTCCAGGTGTGCCACGGCAACCTCATAAGAGGTCTTaGCACATTTTGCAAATGCAG +
Preference number: 5 (lower is better)
Translates to: FCKCSLNWMSRSPGVPRQPHKRS*HILQMQ
Trigger: CTGCATTTGCAAAATGTGCAAAGACCTCTTATGAGG...TTGCCGTGGCACACCTGGACTCCTTGACATCCAATTCAAACTGCATTTGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GGACTCTCTCTAGTGAAGCCAGCCTCTAGTTTCTTTGCAAGAACCTGTGTCATGATTTTCCACACTGCATaGATTAAGGCTTTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GLSLVKPASSFFARTCVMIFHTA*IKALTA
Trigger: AGCTGTCAAAGCCTTAATCAATGCAGTGTGGAAAAT...CATGACACAGGTTCTTGCAAAGAAACTAGAGGCTGGCTTCACTAGAGAGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp CCTGACATCCATCCATATTTTCAGGTTTCTTGGTTGACATGTCCCTGGCAGAGAGAACTAAAACTATTCTaGCAACTCACTGTCATCCCC +
Preference number: 5 (lower is better)
Translates to: PDIHPYFQVSWLTCPWQRELKLF*QLTVIP
Trigger: GGGGATGACAGTGAGTTGCAAGAATAGTTTTAGTTC...TCTCTGCCAGGGACATGTCAACCAAGAAACCTGAAAATATGGATGGATGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAAATTTTTCTCTCCACCTaGTTGGCCAAACTTACAAGA +
Preference number: 5 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKIFLST*LAKLTR
Trigger: TCTTGTAAGTTTGGCCAACAAGGTGGAGAGAAAAAT...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp TTTGGCTTCCCTGGGCCACATTGGAAGAAGAATTATCTTGGGCCACACATAAAATTCATAAGAGTCCCATaGTTGCAAATTGGCCATATG +
Preference number: 5 (lower is better)
Translates to: FGFPGPHWKKNYLGPHIKFIRVP*LQIGHM
Trigger: CATATGGCCAATTTGCAACAATGGGACTCTTATGAA...TTTTATGTGTGGCCCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGAAGATGGGTACCCATTaGGGAAACCAGGTGCAGAAA +
Preference number: 5 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKKMGTH*GNQVQK
Trigger: TTTCTGCACCTGGTTTCCCAAATGGGTACCCATCTT...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS-3UTR CAA 90 bp GTGCTAAAATTATGTAAACATCATCCTCTACACTTCTCTAGAACAAGTGCCAAGCTTCCCTGGGCCACATaGGAAGAAGAATTATCTTGG +
Preference number: 5 (lower is better)
Translates to: VLKLCKHHPLHFSRTSAKLPWAT*EEELSW
Trigger: CCAAGATAATTCTTCTTCCAATGTGGCCCAGGGAAG...CTTGGCACTTGTTCTAGAGAAGTGTAGAGGATGATGTTTACATAATTTTAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp TGCCCTCCTCGCCGTCCAGCTCTGAGTAGTCTGCGGTaGCGTCCGGGCGCTCCCCGAGTCCCCCGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: CPPRRPALSSLR*RPGAPRVPRRR
Trigger: GCGGCGCCGGGGGACTCGGGGAGCGCCCGGACGCCACCGCAGACTACTCAGAGCTGGACGGCGAGGAGGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS TCA 72 bp CCCGGCGCCGCGAGGCAGCGGCAGCAGCAGCAGCAGTaGCACCAGGGCCCCAAGTGCAGTCGCCCGGGGCAT +
Preference number: 6 (lower is better)
Translates to: PGAARQRQQQQQ*HQGPKCSRPGH
Trigger: ATGCCCCGGGCGACTGCACTTGGGGCCCTGGTGTCACTGCTGCTGCTGCTGCCGCTGCCTCGCGGCGCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 72 bp GGCTCCGGCCGGGACTCGGTGGTTACACAGGGCTGCTaGGCATGGCTCAGGCGCGGAGCAAGCGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: GSGRDSVVTQGC*AWLRRGASGAR
Trigger: CCGCGCTCCGCTTGCTCCGCGCCTGAGCCATGCCCAGCAGCCCTGTGTAACCACCGAGTCCCGGCCGGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CAA 72 bp CGTCGAGGCAACCGGGAAGCAGCCGCTCGGAGCTACTaGCCCGGCGGCCGAGGCTGCGGCGGCTGCGAGTGT +
Preference number: 6 (lower is better)
Translates to: RRGNREAAARSY*PGGRGCGGCEC
Trigger: ACACTCGCAGCCGCCGCAGCCTCGGCCGCCGGGCAAGTAGCTCCGAGCGGCTGCTTCCCGGTTGCCTCGACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS GCA 72 bp GTCGGCTCCGGCCGGGACTCGGTGGTTACACAGGGCTaGTGGGCATGGCTCAGGCGCGGAGCAAGCGGAGCG +
Preference number: 6 (lower is better)
Translates to: VGSGRDSVVTQG*WAWLRRGASGA
Trigger: CGCTCCGCTTGCTCCGCGCCTGAGCCATGCCCAGCAGCCCTGTGTAACCACCGAGTCCCGGCCGGAGCCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 72 bp GGTGGCGCGGGGCCGGCTGGGGCAGAGGGAGTTGCGTaGACGAAAGCTCAGCTCGGCCGAAAGACGGCGCAC +
Preference number: 6 (lower is better)
Translates to: GGAGPAGAEGVA*TKAQLGRKTAH
Trigger: GTGCGCCGTCTTTCGGCCGAGCTGAGCTTTCGTGCACGCAACTCCCTCTGCCCCAGCCGGCCCCGCGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 72 bp CGCACACTGGGTCGGTCGGCTCCGGCCGGGACTCGGTaGTTACACAGGGCTGCTGGGCATGGCTCAGGCGCG +
Preference number: 6 (lower is better)
Translates to: RTLGRSAPAGTR*LHRAAGHGSGA
Trigger: CGCGCCTGAGCCATGCCCAGCAGCCCTGTGTAACCACCGAGTCCCGGCCGGAGCCGACCGACCCAGTGTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 72 bp GCATGGTGGCGCGGGGCCGGCTGGGGCAGAGGGAGTTaGGTGCACGAAAGCTCAGCTCGGCCGAAAGACGGC +
Preference number: 6 (lower is better)
Translates to: AWWRGAGWGRGS*VHESSARPKDG
Trigger: GCCGTCTTTCGGCCGAGCTGAGCTTTCGTGCACGCAACTCCCTCTGCCCCAGCCGGCCCCGCGCCACCATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 72 bp ATGACCTCCGGCGTCTCAGAGCCGCAGAACCTGCCGTaGAGCTTGGCGTCGGGGGACAGGCCGCTGCGCACC +
Preference number: 6 (lower is better)
Translates to: MTSGVSEPQNLP*SLASGDRPLRT
Trigger: GGTGCGCAGCGGCCTGTCCCCCGACGCCAAGCTGCACGGCAGGTTCTGCGGCTCTGAGACGCCGGAGGTCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp CACGAAAGCTCAGCTCGGCCGAAAGACGGCGCACACTaGGTCGGTCGGCTCCGGCCGGGACTCGGTGGTTAC +
Preference number: 6 (lower is better)
Translates to: HESSARPKDGAH*VGRLRPGLGGY
Trigger: GTAACCACCGAGTCCCGGCCGGAGCCGACCGACCCAGTGTGCGCCGTCTTTCGGCCGAGCTGAGCTTTCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 72 bp TGCTGCCGGAAGCCACCGTGGGGTCTGGTTTCTTGCTaGCGCAGAAACGGCCCAGAATGGGGGCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: CCRKPPWGLVSC*RRNGPEWGPGC
Trigger: ACAGCCTGGCCCCCATTCTGGGCCGTTTCTGCGGCAGCAAGAAACCAGACCCCACGGTGGCTTCCGGCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS GCA 72 bp TACTGCTGCCGGAAGCCACCGTGGGGTCTGGTTTCTTaGTGCCGCAGAAACGGCCCAGAATGGGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: YCCRKPPWGLVS*CRRNGPEWGPG
Trigger: GCCTGGCCCCCATTCTGGGCCGTTTCTGCGGCAGCAAGAAACCAGACCCCACGGTGGCTTCCGGCAGCAGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS GCA 72 bp TGCAAGGGTCGTGGTAATGCTCCAGCTGCTGCTCCGTaGCCTCCTCGCCGTCCAGCTCTGAGTAGTCTGCGG +
Preference number: 6 (lower is better)
Translates to: CKGRGNAPAAAP*PPRRPALSSLR
Trigger: CCGCAGACTACTCAGAGCTGGACGGCGAGGAGGGCACGGAGCAGCAGCTGGAGCATTACCACGACCCTTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 72 bp TGTGGCTCTTCGGACCCGGGGAGAGAAGGTCTTGGCTaGGGCATGCAAGGTCCCAGGGCTGTGCAGGAGTGT +
Preference number: 6 (lower is better)
Translates to: CGSSDPGREGLG*GMQGPRAVQEC
Trigger: ACACTCCTGCACAGCCCTGGGACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCCGGGTCCGAAGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp AGGTTGTGGCTCTTCGGACCCGGGGAGAGAAGGTCTTaGCTGCGGCATGCAAGGTCCCAGGGCTGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: RLWLFGPGERRS*LRHARSQGCAG
Trigger: TCCTGCACAGCCCTGGGACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCCGGGTCCGAAGAGCCACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CAA 90 bp CTGAGAAACATACTGCTGCCGGAAGCCACCGTGGGGTCTGGTTTCTaGCTGCCGCAGAAACGGCCCAGAATGGGGGCCAGGCTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: LRNILLPEATVGSGF*LPQKRPRMGARLSG
Trigger: GCCGGACAGCCTGGCCCCCATTCTGGGCCGTTTCTGCGGCAGCAAGAAACCAGACCCCACGGTGGCTTCCGGCAGCAGTATGTTTCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS CAA 90 bp CTGCAGGGTCTCCCCACACGCTGGGCATTTGTACAGCTTCCGGGCTaGAGCTATGTCTCCCTGACTGAGCCGCACGCGCTGGCCAATGGT +
Preference number: 6 (lower is better)
Translates to: LQGLPTRWAFVQLPG*SYVSLTEPHALANG
Trigger: ACCATTGGCCAGCGCGTGCGGCTCAGTCAGGGAGACATAGCTCAAGCCCGGAAGCTGTACAAATGCCCAGCGTGTGGGGAGACCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp CAGAAAGTAAGGCAAGGGCCTGGCGTTCAGCTGGGGTaGGGGCCTCCTTTCCAGTTCTGGGACAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: QKVRQGPGVQLG*GPPFQFWDRKG
Trigger: CCCCTTCCTGTCCCAGAACTGGAAAGGAGGCCCCCACCCCAGCTGAACGCCAGGCCCTTGCCTTACTTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CAA 72 bp CTCCCCACACGCTGGGCATTTGTACAGCTTCCGGGCTaGAGCTATGTCTCCCTGACTGAGCCGCACGCGCTG +
Preference number: 6 (lower is better)
Translates to: LPTRWAFVQLPG*SYVSLTEPHAL
Trigger: CAGCGCGTGCGGCTCAGTCAGGGAGACATAGCTCAAGCCCGGAAGCTGTACAAATGCCCAGCGTGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CAA 90 bp TCTGTCCTTGAGGTTGTGGCTCTTCGGACCCGGGGAGAGAAGGTCTaGGCTGCGGCATGCAAGGTCCCAGGGCTGTGCAGGAGTGTGGTA +
Preference number: 6 (lower is better)
Translates to: SVLEVVALRTRGEKV*AAACKVPGLCRSVV
Trigger: TACCACACTCCTGCACAGCCCTGGGACCTTGCATGCCGCAGCCAAGACCTTCTCTCCCCGGGTCCGAAGAGCCACAACCTCAAGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 72 bp GCCAGTTGGGGCTCGCCAGGGTCCCCTCCACACTGCTaGTCTTGTGTGCACAGCCAGCCTCTTTGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: ASWGSPGSPPHC*SCVHSQPLCSH
Trigger: ATGACTGCAAAGAGGCTGGCTGTGCACACAAGATCAGCAGTGTGGAGGGGACCCTGGCGAGCCCCAACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp GTCTCCCTGACTGAGCCGCACGCGCTGGCCAATGGTTaGCCTGACGCCATTGTCATCTTGACGGGGAAGGAT +
Preference number: 6 (lower is better)
Translates to: VSLTEPHALANG*PDAIVILTGKD
Trigger: ATCCTTCCCCGTCAAGATGACAATGGCGTCAGGCCAACCATTGGCCAGCGCGTGCGGCTCAGTCAGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 72 bp GGCTCCCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATaGCTGTGGTGTCTGGGCTGCTCTCAGATGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GSPFQLPWCQCP*LWCLGCSQMPA
Trigger: AGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS TCA 72 bp CCCAGCGTGTTCACACAGCGATGCTCGCACCCGCCGTaGTCTGGCCAGGAACACTCATCCACCTCCTTGAAA +
Preference number: 6 (lower is better)
Translates to: PSVFTQRCSHPP*SGQEHSSTSLK
Trigger: TTTCAAGGAGGTGGATGAGTGTTCCTGGCCAGATCACGGCGGGTGCGAGCATCGCTGTGTGAACACGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp GGCCATCCTTTCCAGCTTCCTTGGTGCCAGTGTCCATaGCTGTGGTGTCTGGGCTGCTCTCAGATGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GHPFQLPWCQCP*LWCLGCSQMPA
Trigger: AGCAGGCATCTGAGAGCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp GTGTGGTATTCTCCCGGCCATCCTTTCCAGCTTCCTTaGTGCCAGTGTCCATGGCTGTGGTGTCTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: VWYSPGHPFQLP*CQCPWLWCLGC
Trigger: GCAGCCCAGACACCACAGCCATGGACACTGGCACCAAGGAAGCTGGAAAGGATGGCCGGGAGAATACCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CCA 72 bp GAGAAACATACTGCTGCCGGAAGCCACCGTGGGGTCTaGTTTCTTGCTGCCGCAGAAACGGCCCAGAATGGG +
Preference number: 6 (lower is better)
Translates to: EKHTAAGSHRGV*FLAAAETAQNG
Trigger: CCCATTCTGGGCCGTTTCTGCGGCAGCAAGAAACCAGACCCCACGGTGGCTTCCGGCAGCAGTATGTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS GCA 72 bp GGGAAACCAGGTGCAGAAAAGTTTCCCGTTGTGTCCTaGAGGGTCTCCCCACACGCCCTTTGCCAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: GKPGAEKFPVVS*RVSPHALCQPK
Trigger: CTTTGGCTGGCAAAGGGCGTGTGGGGAGACCCTGCAGGACACAACGGGAAACTTTTCTGCACCTGGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS CAA 72 bp ATGCCTGCTCTTCAAGCCCACCTGTGCTGTGTCCTGTaGCCCCCACTGTCTGCTTGGTCCAGTCTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: MPALQAHLCCVL*PPLSAWSSLWL
Trigger: AAGCCAGAGACTGGACCAAGCAGACAGTGGGGGCAACAGGACACAGCACAGGTGGGCTTGAAGAGCAGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CAA 72 bp ACAAGTAGGACCTGGGCATTTGTACAGCTTCCGGGCTaGAGCTATGTCTCCCTGACTGAGCCGCACGCGCTG +
Preference number: 6 (lower is better)
Translates to: TSRTWAFVQLPG*SYVSLTEPHAL
Trigger: CAGCGCGTGCGGCTCAGTCAGGGAGACATAGCTCAAGCCCGGAAGCTGTACAAATGCCCAGGTCCTACTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS CAA 90 bp TGCACTCTGCTGCACGACCCTTTAGTACAAATGACGCTGGTGAGGTaGTATGAGGTGCACGCTGCTCCAGGCAGCACCCTCATGGTGGCT +
Preference number: 6 (lower is better)
Translates to: CTLLHDPLVQMTLVR*YEVHAAPGSTLMVA
Trigger: AGCCACCATGAGGGTGCTGCCTGGAGCAGCGTGCACCTCATACAACCTCACCAGCGTCATTTGTACTAAAGGGTCGTGCAGCAGAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS GCA 72 bp GGGAAACCAGGTGCAGAAAAGTTTCCCGTTGTGTCCTaGAGGGTCTCCCCACACGCTGGGCATTTGTACAGC +
Preference number: 6 (lower is better)
Translates to: GKPGAEKFPVVS*RVSPHAGHLYS
Trigger: GCTGTACAAATGCCCAGCGTGTGGGGAGACCCTGCAGGACACAACGGGAAACTTTTCTGCACCTGGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CAA 72 bp CTGCACGACCCTTTAGTACAAATGACGCTGGTGAGGTaGTATGAGGTGCACGCTGCTCCAGGCAGCACCCTC +
Preference number: 6 (lower is better)
Translates to: LHDPLVQMTLVR*YEVHAAPGSTL
Trigger: GAGGGTGCTGCCTGGAGCAGCGTGCACCTCATACAACCTCACCAGCGTCATTTGTACTAAAGGGTCGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CAA 90 bp AACAAAAGCACAAGTAGGACCTGGGCATTTGTACAGCTTCCGGGCTaGAGCTATGTCTCCCTGACTGAGCCGCACGCGCTGGCCAATGGT +
Preference number: 6 (lower is better)
Translates to: NKSTSRTWAFVQLPG*SYVSLTEPHALANG
Trigger: ACCATTGGCCAGCGCGTGCGGCTCAGTCAGGGAGACATAGCTCAAGCCCGGAAGCTGTACAAATGCCCAGGTCCTACTTGTGCTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS CCA 72 bp TGCCCAAGGTCACATACTGAGAGTTGGGCCATGATCTaGTGCTCTGGCATCAGAGACCCTGCTGTTGACCTG +
Preference number: 6 (lower is better)
Translates to: CPRSHTESWAMI*CSGIRDPAVDL
Trigger: CAGGTCAACAGCAGGGTCTCTGATGCCAGAGCACCAGATCATGGCCCAACTCTCAGTATGTGACCTTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CAA 72 bp CCCTCGCCCTCCCCCAGTCAGAATAAAAGGCAGTCCTaGTCGTGCCTTCACCATTTCTCTGTCTCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: PSPSPSQNKRQS*SCLHHFSVSCP
Trigger: TGGACAGGAGACAGAGAAATGGTGAAGGCACGACAAGGACTGCCTTTTATTCTGACTGGGGGAGGGCGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS TCA 72 bp AGCCTTTCCTCTGCACTGAGGCATCCGAATAAAACCTaGGAAACATACTGCTGCCGGAAGCCACCGTGGGGT +
Preference number: 6 (lower is better)
Translates to: SLSSALRHPNKT*ETYCCRKPPWG
Trigger: ACCCCACGGTGGCTTCCGGCAGCAGTATGTTTCTCAGGTTTTATTCGGATGCCTCAGTGCAGAGGAAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000506028.2
CDS GCA 72 bp TGGTGCTCTGGCATCAGAGACCCTGCTGTTGACCTGTaGACTCTGCTGCACGACCCTTTAGTACAAATGACG +
Preference number: 6 (lower is better)
Translates to: WCSGIRDPAVDL*TLLHDPLVQMT
Trigger: CGTCATTTGTACTAAAGGGTCGTGCAGCAGAGTGCACAGGTCAACAGCAGGGTCTCTGATGCCAGAGCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS TCA 72 bp CGCTGGCCAATGGTTGGCCTGACGCCATTGTCATCTTaGCGGGGAAGGATGGTGTCTAAGAAAACTCCTCTT +
Preference number: 6 (lower is better)
Translates to: RWPMVGLTPLSS*RGRMVSKKTPL
Trigger: AAGAGGAGTTTTCTTAGACACCATCCTTCCCCGTCAAGATGACAATGGCGTCAGGCCAACCATTGGCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS TCA 72 bp CTTCTCTCTCACTTAGGGCTAAGAGCCAGCAAGGGCTaGGTGCCCACTCTGTCGGCAGCTGTTTTAAATGCT +
Preference number: 6 (lower is better)
Translates to: LLSHLGLRASKG*VPTLSAAVLNA
Trigger: AGCATTTAAAACAGCTGCCGACAGAGTGGGCACTCAGCCCTTGCTGGCTCTTAGCCCTAAGTGAGAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS GCA 72 bp GTGGGAGTAAGATGGGTACCCATTTGGGAAACCAGGTaGAGAAAAGTTTCCCGTTGTGTCCTGCAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: VGVRWVPIWETR*RKVSRCVLQGL
Trigger: GAGACCCTGCAGGACACAACGGGAAACTTTTCTGCACCTGGTTTCCCAAATGGGTACCCATCTTACTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 72 bp GGTGACCGAGATCCTCCAGACGCAGTGGGAGTAAGATaGGTACCCATTTGGGAAACCAGGTGCAGAAAAGTT +
Preference number: 6 (lower is better)
Translates to: GDRDPPDAVGVR*VPIWETRCRKV
Trigger: AACTTTTCTGCACCTGGTTTCCCAAATGGGTACCCATCTTACTCCCACTGCGTCTGGAGGATCTCGGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CAA 90 bp GACACATTCCTTGGAAGGTCTGTAGTCATCCGGATAGTTGGGAGATaGAATCTGACCGGCATCTTTGTTCATGTCTCCCCCGCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: DTFLGRSVVIRIVGR*NLTGIFVHVSPAGS
Trigger: GCTACCTGCGGGGGAGACATGAACAAAGATGCCGGTCAGATTCAATCTCCCAACTATCCGGATGACTACAGACCTTCCAAGGAATGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CAA 72 bp TCCTCCAGACGCAGTGGGAGTAAGATGGGTACCCATTaGGGAAACCAGGTGCAGAAAAGTTTCCCGTTGTGT +
Preference number: 6 (lower is better)
Translates to: SSRRSGSKMGTH*GNQVQKSFPLC
Trigger: ACACAACGGGAAACTTTTCTGCACCTGGTTTCCCAAATGGGTACCCATCTTACTCCCACTGCGTCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CAA 72 bp CACACGCCCTTTGCCAGCCAAAGCCCTCGGAACAGGTaGGTGAGAAGTGTAGCAAGCAGATTGATGTTTTCT +
Preference number: 6 (lower is better)
Translates to: HTPFASQSPRNR*VRSVASRLMFS
Trigger: AGAAAACATCAATCTGCTTGCTACACTTCTCACCAACCTGTTCCGAGGGCTTTGGCTGGCAAAGGGCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469598.1
CDS TCA 72 bp TTACAGGTGAGGAAAATGAGGCTCATCGCTGTCAGATaGCTTGCCCAAGGTCACATACTGAGAGTTGGGCCA +
Preference number: 6 (lower is better)
Translates to: LQVRKMRLIAVR*LAQGHILRVGP
Trigger: TGGCCCAACTCTCAGTATGTGACCTTGGGCAAGTCATCTGACAGCGATGAGCCTCATTTTCCTCACCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS GCA 72 bp CTCAAACTCATTAAAGGTGAGTTTCACTCTGTGGCCTaGAGTCGAAGAGATGTTCCAGGTACACTCCCTCCG +
Preference number: 6 (lower is better)
Translates to: LKLIKGEFHSVA*SRRDVPGTLPP
Trigger: CGGAGGGAGTGTACCTGGAACATCTCTTCGACTGCAGGCCACAGAGTGAAACTCACCTTTAATGAGTTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS CAA 72 bp CTTGGAAGGTCTGTAGTCATCCGGATAGTTGGGAGATaGAATCTGACCGGCATCTTTGTTCATGTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: LGRSVVIRIVGR*NLTGIFVHVSP
Trigger: GGGGGAGACATGAACAAAGATGCCGGTCAGATTCAATCTCCCAACTATCCGGATGACTACAGACCTTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS TCA 72 bp AAAAGCTTGGAAGGTAAGTCCCACGTGAAACCCCTCTaGAACCGTAATCCTCCAGACACATTCCTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: KSLEGKSHVKPL*NRNPPDTFLGR
Trigger: CCTTCCAAGGAATGTGTCTGGAGGATTACGGTTTCAGAGGGGTTTCACGTGGGACTTACCTTCCAAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS CCA 72 bp TCGATCTCAAACTCATTAAAGGTGAGTTTCACTCTGTaGCCTGCAGTCGAAGAGATGTTCCAGGTACACTCC +
Preference number: 6 (lower is better)
Translates to: SISNSLKVSFTL*PAVEEMFQVHS
Trigger: GGAGTGTACCTGGAACATCTCTTCGACTGCAGGCCACAGAGTGAAACTCACCTTTAATGAGTTTGAGATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357947.4
CDS TCA 72 bp CTTTCAATCTCAAAAGCTTGGAAGGTAAGTCCCACGTaGAACCCCTCTGAAACCGTAATCCTCCAGACACAT +
Preference number: 6 (lower is better)
Translates to: LSISKAWKVSPT*NPSETVILQTH
Trigger: ATGTGTCTGGAGGATTACGGTTTCAGAGGGGTTTCACGTGGGACTTACCTTCCAAGCTTTTGAGATTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS GCA 72 bp CTCATGGTGGCTGACTCTCGCCGAGTGTTTATTCCATaGCAAGCATTTATGCGCATTTTCTCTCTTACTTCT +
Preference number: 6 (lower is better)
Translates to: LMVADSRRVFIP*QAFMRIFSLTS
Trigger: AGAAGTAAGAGAGAAAATGCGCATAAATGCTTGGCATGGAATAAACACTCGGCGAGAGTCAGCCACCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CCA 72 bp CACATTCCTTGGAAGGTCTGTAGTCATCCGGATAGTTaGGAGATTGAATCTGACCGGCATCTTTGTTCATGT +
Preference number: 6 (lower is better)
Translates to: HIPWKVCSHPDS*EIESDRHLCSC
Trigger: ACATGAACAAAGATGCCGGTCAGATTCAATCTCCCAACTATCCGGATGACTACAGACCTTCCAAGGAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS TCA 72 bp ACTGTCTGCTTGGTCCAGTCTCTGGCTTTGTCAATGTaGAACAGCTTCAAGTCATCTTCATCTAAGGCAATG +
Preference number: 6 (lower is better)
Translates to: TVCLVQSLALSM*NSFKSSSSKAM
Trigger: CATTGCCTTAGATGAAGATGACTTGAAGCTGTTTCACATTGACAAAGCCAGAGACTGGACCAAGCAGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357947.4
ENST00000469598.1
CDS TCA 72 bp GAGAGCAGGGGTTCAGAGATTAAATGCTTGACATTTTaGCAGCTATTAAGCGACAGAGCCAGGCTTTACACA +
Preference number: 6 (lower is better)
Translates to: ESRGSEIKCLTF*QLLSDRARLYT
Trigger: TGTGTAAAGCCTGGCTCTGTCGCTTAATAGCTGTCAAAATGTCAAGCATTTAATCTCTGAACCCCTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS TCA 72 bp TTTTGGTCCAGCAAGTGGCCCTATGAAGTAGTTACATaGGCTATTGCTACAATGACCACACTGCAGATGAGA +
Preference number: 6 (lower is better)
Translates to: FWSSKWPYEVVT*AIATMTTLQMR
Trigger: TCTCATCTGCAGTGTGGTCATTGTAGCAATAGCTCATGTAACTACTTCATAGGGCCACTTGCTGGACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506028.2
CDS CCA 72 bp GTTGGTGAGAAGTGTAGCAAGCAGATTGATGTTTTCTaGCTAACAAAAGCACAAGTAGGACCTGGGCATTTG +
Preference number: 6 (lower is better)
Translates to: VGEKCSKQIDVF*LTKAQVGPGHL
Trigger: CAAATGCCCAGGTCCTACTTGTGCTTTTGTTAGCCAGAAAACATCAATCTGCTTGCTACACTTCTCACCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469598.1