RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000038295

Ensembl transcript IDs: ENST00000061240.7, ENST00000504560.5, ENST00000507499.5, ENST00000509505.5, ENST00000513213.5

Found 534 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAAATACAGATTGACTCTGACCTCCCCTCATGAGAAGTCCAGGTaGTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCC +
Preference number: 1 (lower is better)
Translates to: PKYRLTLTSPHEKSR*FFLNFKGSGSPGIA
Trigger: GGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCACCTGGACTTCTCATGAGGGGAGGTCAGAGTCAATCTGTATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
3UTR TCA 90 bp AGCTTTCTTGCCTGTGCGATATCTCCTTTGCTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATGCCATTATCATCACGGGAGGGGAGA +
Preference number: 1 (lower is better)
Translates to: SFLACAISPLLRRVR*PIAGRMPLSSREGR
Trigger: TCTCCCCTCCCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCACAGGCAAGAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR GCA 90 bp TATCTCCTTTGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATaGCATTATCATCACGGGAGGGGAGAATGGTATCCAGAAACATCC +
Preference number: 1 (lower is better)
Translates to: YLLCLDGFADQLQDV*HYHHGRGEWYPETS
Trigger: GGATGTTTCTGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR TCA 90 bp TCTTCTTATCCTGTCTATAAGTTGGTAGAGGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAGTCCACCTGTGGTATGTCCAAGGTT +
Preference number: 1 (lower is better)
Translates to: SSYPVYKLVEGPSLL*HSMVSKSTCGMSKV
Trigger: AACCTTGGACATACCACAGGTGGACTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCCCTCTACCAACTTATAGACAGGATAAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
3UTR CCA 90 bp TCACAGAAACTCTCCAGATGCAGTGTGTGTAAGAAGGGTAGCCATTaGGAAATCCTGGAGAGGAAAGGTTGCCATTGGATTCTTGTAGAG +
Preference number: 1 (lower is better)
Translates to: SQKLSRCSVCKKGSH*EILERKGCHWILVE
Trigger: CTCTACAAGAATCCAATGGCAACCTTTCCTCTCCAGGATTTCCCAATGGCTACCCTTCTTACACACACTGCATCTGGAGAGTTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CCA 90 bp TTTTCCACACACATTCTTTCATCGGGCGATAGTCATCAGGATAATTaGGAGACTGAATCTGTCCTTCATTTTTACGTATCTCACCTCCAC +
Preference number: 1 (lower is better)
Translates to: FSTHILSSGDSHQDN*ETESVLHFYVSHLH
Trigger: GTGGAGGTGAGATACGTAAAAATGAAGGACAGATTCAGTCTCCCAATTATCCTGATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CCA 90 bp TACACTAAAGTGGTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTaGCCTGCAAGTGGAAATAATGAAGCTGAAATATCCCAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: YTKVVSRSFVFQRLS*PASGNNEAEISQFP
Trigger: TGGAAACTGGGATATTTCAGCTTCATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGACCACTTTAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR TCA 90 bp GGCATTATAAGTAGTTGTTCCACAGGACAAGTGCTGCCCTTGCAATaGTATACTCTTGATATATTTGACAAGTCTTTAGTCTTCAAATGC +
Preference number: 1 (lower is better)
Translates to: GIISSCSTGQVLPLQ*YTLDIFDKSLVFKC
Trigger: GCATTTGAAGACTAAAGACTTGTCAAATATATCAAGAGTATATCATTGCAAGGGCAGCACTTGTCCTGTGGAACAACTACTTATAATGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR CCA 90 bp GTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATaGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTAT +
Preference number: 1 (lower is better)
Translates to: VQITLRRLPFHIHLI*IWFTLYPRYKVSNY
Trigger: ATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CAA 90 bp GGTGCAACCACTTGCCACACACAGTTCTTATTAGGAGGGTACTCCTaGGGCCAGCCAGGGGTGGTTATGGTGCCGTTAAGTTTGGTAAGA +
Preference number: 2 (lower is better)
Translates to: GATTCHTQFLLGGYS*GQPGVVMVPLSLVR
Trigger: TCTTACCAAACTTAACGGCACCATAACCACCCCTGGCTGGCCCAAGGAGTACCCTCCTAATAAGAACTGTGTGTGGCAAGTGGTTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp GCTACCAGCCATAGGGAGACATTCGTAGTCTACGGGTGGGTTGGCTCAAAGGTCGCAGCAGCAGTAACTTaGGTAATGAACCATCCAGAC +
Preference number: 2 (lower is better)
Translates to: ATSHRETFVVYGWVGSKVAAAVT*VMNHPD
Trigger: GTCTGGATGGTTCATTACTCAAGTTACTGCTGCTGC...GACCTTTGAGCCAACCCACCCGTAGACTACGAATGTCTCCCTATGGCTGGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR TCA 90 bp TGGTCTCCAAGTCCACCTGTGGTATGTCCAAGGTTTCCAAAGGGGTTCTGCGTATCTGACCTCCCCTCATaGGAAGTCCAGGTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: WSPSPPVVCPRFPKGFCVSDLPS*EVQVLL
Trigger: AAGAAGCACCTGGACTTCTCATGAGGGGAGGTCAGA...TACGCAGAACCCCTTTGGAAACCTTGGACATACCACAGGTGGACTTGGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
3UTR-3UTR CCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCAACAATCTTCTCCCCTaGGGTCACAGAAACTCTCCA +
Preference number: 2 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFNNLLP*GHRNSP
Trigger: TGGAGAGTTTCTGTGACCCCAGGGGAGAAGATTGTT...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CAA 90 bp TTGCCTGTGCGATATCTCCTTTGCTTAGACGGGTTCGCTGACCAATaGCAGGACGTATGCCATTATCATCACGGGAGGGGAGAATGGTAT +
Preference number: 2 (lower is better)
Translates to: LPVRYLLCLDGFADQ*QDVCHYHHGRGEWY
Trigger: ATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCACAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CAA 90 bp ATTTCCCAAGTGCATTCTTTCCTGCTTGGGTACTTGTCTGGCCAGTaGGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCA +
Preference number: 2 (lower is better)
Translates to: ISQVHSFLLGYLSGQ*GLVMRPLGLWIFCS
Trigger: TGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCCAACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGCACTTGGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp GCTACCAGCCATAGGGAGACATTCGTAGTCTACGGGTGGGTTGGCTCAAAGGTCTTCTTGGATTTGGTGTaGAAAGGCAGCACTTCCAAA +
Preference number: 2 (lower is better)
Translates to: ATSHRETFVVYGWVGSKVFLDLV*KGSTSK
Trigger: TTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGAA...GACCTTTGAGCCAACCCACCCGTAGACTACGAATGTCTCCCTATGGCTGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR CAA 90 bp TTGAACTGGGATGTGATCACTTCAGGCACTTCAGCGCCACAGAATTaGCCATGCAGTTTAGACTCAGAGGAAAGACCACTCCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: LNWDVITSGTSAPQN*PCSLDSEERPLQIS
Trigger: GGAGATCTGGAGTGGTCTTTCCTCTGAGTCTAAACTGCATGGCAAATTCTGTGGCGCTGAAGTGCCTGAAGTGATCACATCCCAGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCTTCTTGGATTTGGTGTaGAAAGGCAGCACTTCCAAA +
Preference number: 2 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFFLDLV*KGSTSK
Trigger: TTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGAA...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATCCGATAGAGATTGCCTaGGGTCCATTTCCTCGCCGA +
Preference number: 2 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHPIEIA*GPFPRR
Trigger: TCGGCGAGGAAATGGACCTCAGGCAATCTCTATCGG...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp TCCAAGTCCACCTGTGGTATGTCCAAGGTTTCCAAAGGGGTTCTGCGTAAGGTCCATGAGAAGTCCAGGTaGTTCTTCTTGAACTTCAAG +
Preference number: 2 (lower is better)
Translates to: SKSTCGMSKVSKGVLRKVHEKSR*FFLNFK
Trigger: CTTGAAGTTCAAGAAGAAGCACCTGGACTTCTCATG...GACCTTACGCAGAACCCCTTTGGAAACCTTGGACATACCACAGGTGGACTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
3UTR-3UTR GCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATCAGTGCCTCATGGCCTaGTTGAACATGGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHQCLMA*LNMALW
Trigger: CCAGAGAGCCATGTTCAAGCAGGCCATGAGGCACTG...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCAGTTTCTCCACATGCTaGACATCTATACAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFSFSTC*TSIQLS
Trigger: AGAAAGCTGTATAGATGTCCAGCATGTGGAGAAACT...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp GGACGTATGCCATTATCATCACGGGAGGGGAGAATGGTATCCAGAAACATCCCCGTCTTCTCTCCATTATaGACATTCCTTTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: GRMPLSSREGRMVSRNIPVFSPL*TFLCVL
Trigger: CAGAACACAAAGGAATGTGCATAATGGAGAGAAGAC...GGGGATGTTTCTGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGGTTCGCTGACCAATTaGAGGACGTATGCCATTATC +
Preference number: 2 (lower is better)
Translates to: NSLKANLIRWPGVALISQGSLTN*RTYAII
Trigger: GATAATGGCATACGTCCTGCAATTGGTCAGCGAACC...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAACGCTTCATAGACAGCTaGAAAGCCTTTTCCTACCCA +
Preference number: 2 (lower is better)
Translates to: NSLKANLIRWPGVALISQRFIDS*KAFSYP
Trigger: TGGGTAGGAAAAGGCTTTGCAGCTGTCTATGAAGCG...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp AGACATCGCTGCTCACAGCCTCCACGGTCAGGTTTGGCACACTCATCTTCCTCTCACATTCACCTTATATaGATCTGGTTTACACTGTAT +
Preference number: 2 (lower is better)
Translates to: RHRCSQPPRSGLAHSSSSHIHLI*IWFTLY
Trigger: ATACAGTGTAAACCAGATCCATATAAGGTGAATGTG...AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGGCTGTGAGCAGCGATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTACACGGGAGGGGAGAATaGTATCCAGAAACATCCCCC +
Preference number: 2 (lower is better)
Translates to: HTVVQESVTFLFLHQILLHGRGE*YPETSP
Trigger: GGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTG...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAACAGAAACTCTCCAGATaGAGTGTGTGTAAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: NSLKANLIRWPGVALISQQKLSR*SVCKKG
Trigger: ACCCTTCTTACACACACTGCATCTGGAGAGTTTCTG...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCACAGGGTCACAGTTCCTaGATTAAACTGTCTGAATTG +
Preference number: 2 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPQGHSS*IKLSEL
Trigger: CAATTCAGACAGTTTAATTCAGGAACTGTGACCCTG...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATG +
Preference number: 2 (lower is better)
Translates to: EVYDALSPALLIPSSMEFLRRVR*PIAGRM
Trigger: CATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTACTTGCCGATAGAGATTaGCTGAGGTCCATTTCCTCG +
Preference number: 2 (lower is better)
Translates to: HTVVQESVTFLFLHQILLLADRD*LRSISS
Trigger: CGAGGAAATGGACCTCAGGCAATCTCTATCGGCAAG...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGATTGAACATGGCTCTCTaGCTGCCAGTGAAGTTTCCT +
Preference number: 2 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGLNMAL*LPVKFP
Trigger: AGGAAACTTCACTGGCAGCCAGAGAGCCATGTTCAA...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp CTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGTGCATATTGTACTCTTGACCTaGCTGGATGTTTTCTCTTAT +
Preference number: 2 (lower is better)
Translates to: LKANLIRWPGVALISQVHIVLLT*LDVFSY
Trigger: ATAAGAGAAAACATCCAGCCAGGTCAAGAGTACAAT...ATGCACTTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATCATTCAGAAGAATCCTaGTCACACCTCTTCGGAGTT +
Preference number: 2 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHHSEES*SHLFGV
Trigger: AACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATG...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CAA 90 bp CCCTTCTTGGATACAGTATTGTCAGATTTGAATTCAATTCTCATATaGTTGAACTGGGATGTGATCACTTCAGGCACTTCAGCGCCACAG +
Preference number: 2 (lower is better)
Translates to: PFLDTVLSDLNSILI*LNWDVITSGTSAPQ
Trigger: CTGTGGCGCTGAAGTGCCTGAAGTGATCACATCCCAGTTCAACAATATGAGAATTGAATTCAAATCTGACAATACTGTATCCAAGAAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGGTCTTCTCTCCATTATaGACATTCCTTTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWVFSPL*TFLCVL
Trigger: CAGAACACAAAGGAATGTGCATAATGGAGAGAAGAC...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGTTCCAGTTTACGACCTaGAAGATCATTTTATGTCCC +
Preference number: 2 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWFQFTT*KIILCP
Trigger: GGGACATAAAATGATCTTGCAGGTCGTAAACTGGAA...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR CCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGTTTCAGAGGTTAAGCTaGCCTGCAAGTGGAAATAAT +
Preference number: 2 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWFQRLS*PASGNN
Trigger: ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAA...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCCAGGGTCACAGTTCCTaGATTAAACTGTCTGAATTG +
Preference number: 2 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFQGHSS*IKLSEL
Trigger: CAATTCAGACAGTTTAATTCAGGAACTGTGACCCTG...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTTGTCAAAAAGAACACTaGAGGGTCACAGTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVCQKEH*RVTVPE
Trigger: TTCAGGAACTGTGACCCTGCAGTGTTCTTTTTGACA...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATTTCCAGTTTACGACCTaGAAGATCATTTTATGTCCC +
Preference number: 2 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHFQFTT*KIILCP
Trigger: GGGACATAAAATGATCTTGCAGGTCGTAAACTGGAA...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTACCACAGAATTTGCCATaGAGTTTAGACTCAGAGGAA +
Preference number: 2 (lower is better)
Translates to: HTVVQESVTFLFLHQILLPQNLP*SLDSEE
Trigger: TTCCTCTGAGTCTAAACTGCATGGCAAATTCTGTGG...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAATCTCTTTCCCATTTCTaGCATATTTTGGCTAACGGG +
Preference number: 2 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSESLSHF*HILANG
Trigger: CCCGTTAGCCAAAATATGCCAGAAATGGGAAAGAGA...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR TCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCAAACTGTCTGAATTGTaGGGCATCTATTTCAAGCTG +
Preference number: 2 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSKLSEL*GIYFKL
Trigger: CAGCTTGAAATAGATGCCTCACAATTCAGACAGTTT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCAAACTGTCTGAATTGTaGGGCATCTATTTCAAGCTG +
Preference number: 2 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFKLSEL*GIYFKL
Trigger: CAGCTTGAAATAGATGCCTCACAATTCAGACAGTTT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCAGGGTCACAGTTCCTaGATTAAACTGTCTGAATTG +
Preference number: 2 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSQGHSS*IKLSEL
Trigger: CAATTCAGACAGTTTAATTCAGGAACTGTGACCCTG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCTTCTTGGATTTGGTGTaGAAAGGCAGCACTTCCAAA +
Preference number: 2 (lower is better)
Translates to: EVYDALSPALLIPSSMEFFLDLV*KGSTSK
Trigger: TTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGAA...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTTATTCTTTCCGTTCTTaGTGTAGCGGCTCTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPYSFRS*CSGSGN
Trigger: GTTCCCAGAGCCGCTACATCAAGAACGGAAAGAATA...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTGTCAAAAAGAACACTaGAGGGTCACAGTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYCQKEH*RVTVPE
Trigger: TTCAGGAACTGTGACCCTGCAGTGTTCTTTTTGACA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp ACAAAACGAGAACATGATGACAGTCCTCAAAGTGTAGCATGGAATTTAAAAAGACCACAGGACAAGTGCTaGCCTTGCAATGATATACTC +
Preference number: 2 (lower is better)
Translates to: TKREHDDSPQSVAWNLKRPQDKC*PCNDIL
Trigger: GAGTATATCATTGCAAGGGCAGCACTTGTCCTGTGG...TCTTTTTAAATTCCATGCTACACTTTGAGGACTGTCATCATGTTCTCGTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR CCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGCACATTCACCTTATATaGATCTGGTTTACACTGTAT +
Preference number: 2 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWHIHLI*IWFTLY
Trigger: ATACAGTGTAAACCAGATCCATATAAGGTGAATGTG...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR CCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATACACATTCACCTTATATaGATCTGGTTTACACTGTAT +
Preference number: 2 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIHIHLI*IWFTLY
Trigger: ATACAGTGTAAACCAGATCCATATAAGGTGAATGTG...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR CCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGTAAGTACACTAAAGTaGTCTCAAGATCATTTGTGT +
Preference number: 2 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIVSTLK*SQDHLC
Trigger: ACACAAATGATCTTGAGACCACTTTAGTGTACTTAC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CAA 90 bp TTCTTGGATACAGTATTGTCAGATTTGAATTCAATTCTCATATTGTaGAACTGGGATGTGATCACTTCAGGCACTTCAGCGCCACAGAAT +
Preference number: 2 (lower is better)
Translates to: FLDTVLSDLNSILIL*NWDVITSGTSAPQN
Trigger: ATTCTGTGGCGCTGAAGTGCCTGAAGTGATCACATCCCAGTTCAACAATATGAGAATTGAATTCAAATCTGACAATACTGTATCCAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCATCTATTTCAAGCTGTaGACAAAAGCTTGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSIYFKL*TKACRV
Trigger: GACTCTACAAGCTTTTGTTCACAGCTTGAAATAGAT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR TCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATAAACTGTCTGAATTGTaGGGCATCTATTTCAAGCTG +
Preference number: 2 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYKLSEL*GIYFKL
Trigger: CAGCTTGAAATAGATGCCTCACAATTCAGACAGTTT...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCGTCTTCTCTCCATTATaGACATTCCTTTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: VFLEVYDALSPALLIPSSVFSPL*TFLCVL
Trigger: CAGAACACAAAGGAATGTGCATAATGGAGAGAAGAC...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCTTCCAGTTTACGACCTaGAAGATCATTTTATGTCCC +
Preference number: 2 (lower is better)
Translates to: EVYDALSPALLIPSSMEFFQFTT*KIILCP
Trigger: GGGACATAAAATGATCTTGCAGGTCGTAAACTGGAA...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR GCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCCGATTTTTCTCATTTTaGCCTGAGAATTGTAGAGGT +
Preference number: 2 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFRFFSF*PENCRG
Trigger: ACCTCTACAATTCTCAGGGCAAAATGAGAAAAATCG...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATAGTCATCAGGATAATTaGGAGACTGAATCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYSHQDN*ETESVL
Trigger: AAGGACAGATTCAGTCTCCCAATTATCCTGATGACT...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CCA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCAACATCACAGGCTTCTTaGATTTGGTGTGAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSTSQAS*IWCEKA
Trigger: TGCCTTTTCACACCAAATCCAAGAAGCCTGTGATGT...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR TCA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCATTAGGAGGATCTGTTTaGTCATGTGCAGGAATTCTA +
Preference number: 2 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSLGGSV*SCAGIL
Trigger: TAGAATTCCTGCACATGATCAAACAGATCCTCCTAA...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATCCACATAATCATATTTaGAAACTTCATTGCCTTCCA +
Preference number: 2 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYPHNHI*KLHCLP
Trigger: TGGAAGGCAATGAAGTTTGCAAATATGATTATGTGG...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR TCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTATCTATTTCAAGCTGTaGACAAAAGCTTGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPIYFKL*TKACRV
Trigger: GACTCTACAAGCTTTTGTTCACAGCTTGAAATAGAT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR CAA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCAAATTCTGTACTGGGTaGGTGCAACCACTTGCCACA +
Preference number: 3 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFKFCTG*VQPLAT
Trigger: TGTGGCAAGTGGTTGCACCAACCCAGTACAGAATTT...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR TCA 72 bp CCTGTCTATAAGTTGGTAGAGGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAGTCCACCTGTGGTATG +
Preference number: 3 (lower is better)
Translates to: PVYKLVEGPSLL*HSMVSKSTCGM
Trigger: CATACCACAGGTGGACTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCCCTCTACCAACTTATAGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
3UTR TCA 72 bp GCCTGTGCGATATCTCCTTTGCTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATGCCATTATCATCACGG +
Preference number: 3 (lower is better)
Translates to: ACAISPLLRRVR*PIAGRMPLSSR
Trigger: CCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR GCA 72 bp TGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATaGCATTATCATCACGGGAGGGGAGAATGGTATCCA +
Preference number: 3 (lower is better)
Translates to: CLDGFADQLQDV*HYHHGRGEWYP
Trigger: TGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CCA 72 bp CAGGACGTATGCCATTATCATCACGGGAGGGGAGAATaGTATCCAGAAACATCCCCCTTGAGAAGGTGTTCC +
Preference number: 3 (lower is better)
Translates to: QDVCHYHHGRGE*YPETSPLRRCS
Trigger: GGAACACCTTCTCAAGGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR TCA 72 bp CCCGGATCCACAGAATCGACCAAGCCCCACAGCTGTTaGATCAAGACCATCAAAGAGCTCCACATAGTCATA +
Preference number: 3 (lower is better)
Translates to: PGSTESTKPHSC*IKTIKELHIVI
Trigger: TATGACTATGTGGAGCTCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTTGGTCGATTCTGTGGATCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp AGACATCGCTGCTCACAGCCTCCACGGTCAGGTTTGGCACACTCATCTTCCTCTTTCATCCACAAAGTATaGGAGGTAGATCTTATGTCT +
Preference number: 3 (lower is better)
Translates to: RHRCSQPPRSGLAHSSSSFIHKV*EVDLMS
Trigger: AGACATAAGATCTACCTCCAATACTTTGTGGATGAA...AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGGCTGTGAGCAGCGATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCTTAGGAGGGTACTCCTaGGGCCAGCCAGGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: EVYDALSPALLIPSSMEFLGGYS*GQPGVV
Trigger: AACCACCCCTGGCTGGCCCAAGGAGTACCCTCCTAA...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GGAAGGATAATTCAAGTCGAGAGCCCCGTTCTGATACTAATAGCCATTCACAGTAGGGGATCTGGTATCTaGTTGCCACACAGTCGTCCA +
Preference number: 3 (lower is better)
Translates to: GRIIQVESPVLILIAIHSRGSGI*LPHSRP
Trigger: TGGACGACTGTGTGGCAACAAGATACCAGATCCCCT...ACTGTGAATGGCTATTAGTATCAGAACGGGGCTCTCGACTTGAATTATCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGACCAGAAACATCCCCCTaGAGAAGGTGTTCCTGGCAT +
Preference number: 3 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGPETSP*RRCSWH
Trigger: ATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTGG...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCGGGTTCGCTGACCAATaGCAGGACGTATGCCATTAT +
Preference number: 3 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVIGFADQ*QDVCHY
Trigger: ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCC...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR GCA 72 bp ATCTATACAGCTTTCTTGCCTGTGCGATATCTCCTTTaGTTAGACGGGTTCGCTGACCAATTGCAGGACGTA +
Preference number: 3 (lower is better)
Translates to: IYTAFLPVRYLL*LDGFADQLQDV
Trigger: TACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCACAGGCAAGAAAGCTGTATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp CTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGTGCATTTTCCCTTAACTGTGTaGTTTTGCTCCAAGCATCAA +
Preference number: 3 (lower is better)
Translates to: LKANLIRWPGVALISQVHFPLTV*FCSKHQ
Trigger: TTGATGCTTGGAGCAAAACAACACAGTTAAGGGAAA...ATGCACTTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GGAAGGATAATTCAAGTCGAGAGCCCCGTTCTGATACTAATAGCCATTCACAGTTCAGCGCCACAGAATTaGCCATGCAGTTTAGACTCA +
Preference number: 3 (lower is better)
Translates to: GRIIQVESPVLILIAIHSSAPQN*PCSLDS
Trigger: TGAGTCTAAACTGCATGGCAAATTCTGTGGCGCTGA...ACTGTGAATGGCTATTAGTATCAGAACGGGGCTCTCGACTTGAATTATCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GGAAGGATAATTCAAGTCGAGAGCCCCGTTCTGATACTAATAGCCATTCACAGTTCACTAAAGGCTAATTaGATTCGGTGGCCAGGAGTG +
Preference number: 3 (lower is better)
Translates to: GRIIQVESPVLILIAIHSSLKAN*IRWPGV
Trigger: CACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGA...ACTGTGAATGGCTATTAGTATCAGAACGGGGCTCTCGACTTGAATTATCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAATCTATACAGCTTTCTaGCCTGTGCGATATCTCCTT +
Preference number: 3 (lower is better)
Translates to: NSLKANLIRWPGVALISQIYTAF*PVRYLL
Trigger: AAGGAGATATCGCACAGGCAAGAAAGCTGTATAGAT...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GGAAGGATAATTCAAGTCGAGAGCCCCGTTCTGATACTAATAGCCATTCACAGTATGGTGCCGTTAAGTTaGGTAAGAAGTCCACCACAA +
Preference number: 3 (lower is better)
Translates to: GRIIQVESPVLILIAIHSMVPLS*VRSPPQ
Trigger: TTGTGGTGGACTTCTTACCAAACTTAACGGCACCAT...ACTGTGAATGGCTATTAGTATCAGAACGGGGCTCTCGACTTGAATTATCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CCA 72 bp TCAATCTCAAATTCACTAAAGGCTAATTTGATTCGGTaGCCAGGAGTGGCGCTGATTTCCCAAGTGCATTCT +
Preference number: 3 (lower is better)
Translates to: SISNSLKANLIR*PGVALISQVHS
Trigger: AGAATGCACTTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATTTGAGATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CCA 72 bp AACAAACATTTTATTTCCAGTAGCCACAAGGGGATCTaGTATCTTGTTGCCACACAGTCGTCCAAGAATCGG +
Preference number: 3 (lower is better)
Translates to: NKHFISSSHKGI*YLVATQSSKNR
Trigger: CCGATTCTTGGACGACTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCTACTGGAAATAAAATGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATACAGAAAATTGTACTCTaGACCTGGCTGGATGTTTTC +
Preference number: 3 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIQKIVL*TWLDVF
Trigger: GAAAACATCCAGCCAGGTCAAGAGTACAATTTTCTG...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGCAGCAAACCCTGCTTaGTTCACAGTTCCGTCAGAA +
Preference number: 3 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYAANPA*FTVPSE
Trigger: TTCTGACGGAACTGTGAACAAAGCAGGGTTTGCTGC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCCTTGTAGAGTCTTCCTaGAAGTATATGATGCCCTTT +
Preference number: 3 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVILVESS*KYMMPF
Trigger: AAAGGGCATCATATACTTCAAGGAAGACTCTACAAG...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTAAGCAGCAGCAGTAACTaGAGTAATGAACCATCCAGA +
Preference number: 3 (lower is better)
Translates to: HTVVQESVTFLFLHQILLSSSSN*SNEPSR
Trigger: TCTGGATGGTTCATTACTCAAGTTACTGCTGCTGCT...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCGGTTGGTGCAACCACTaGCCACACACAGTTCTTATT +
Preference number: 3 (lower is better)
Translates to: EVYDALSPALLIPSSMEFGWCNH*PHTVLI
Trigger: AATAAGAACTGTGTGTGGCAAGTGGTTGCACCAACC...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR TCA 72 bp GACCTACATAGGAGCAGCATCCACAAGGCCTATAGGTaGATACAATGTAACTCTCTTCATCACTTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: DLHRSSIHKAYR*IQCNSLHHFFL
Trigger: TAGAAAGAAGTGATGAAGAGAGTTACATTGTATTCACCTATAGGCCTTGTGGATGCTGCTCCTATGTAGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCTTGTAGAGTCTTCCTaGAAGTATATGATGCCCTTT +
Preference number: 3 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSLVESS*KYMMPF
Trigger: AAAGGGCATCATATACTTCAAGGAAGACTCTACAAG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR CAA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCATTTCTGGCATATTTaGGCTAACGGGAGATTAGTG +
Preference number: 3 (lower is better)
Translates to: EVYDALSPALLIPSSMEFHFWHI*ANGRLV
Trigger: CACTAATCTCCCGTTAGCCAAAATATGCCAGAAATG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR CCA 72 bp ACCCTCAGAAGACTCCCATTTCACATTCACCTTATATaGATCTGGTTTACACTGTATCCAAGATACAAAGTC +
Preference number: 3 (lower is better)
Translates to: TLRRLPFHIHLI*IWFTLYPRYKV
Trigger: GACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CCA 72 bp CACATTCTTTCATCGGGCGATAGTCATCAGGATAATTaGGAGACTGAATCTGTCCTTCATTTTTACGTATCT +
Preference number: 3 (lower is better)
Translates to: HILSSGDSHQDN*ETESVLHFYVS
Trigger: AGATACGTAAAAATGAAGGACAGATTCAGTCTCCCAATTATCCTGATGACTATCGCCCGATGAAAGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTTTAGGAGGATCTGTTaGATCATGTGCAGGAATTCT +
Preference number: 3 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYFRRIC*IMCRNS
Trigger: AGAATTCCTGCACATGATCAAACAGATCCTCCTAAA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR CAA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCAGCACAAACTACTCTaGTATAGATCCATCGTTGTA +
Preference number: 3 (lower is better)
Translates to: EVYDALSPALLIPSSMEFQHKLL*YRSIVV
Trigger: TACAACGATGGATCTATACAAGAGTAGTTTGTGCTG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR TCA 72 bp AGTAGTTGTTCCACAGGACAAGTGCTGCCCTTGCAATaGTATACTCTTGATATATTTGACAAGTCTTTAGTC +
Preference number: 3 (lower is better)
Translates to: SSCSTGQVLPLQ*YTLDIFDKSLV
Trigger: GACTAAAGACTTGTCAAATATATCAAGAGTATATCATTGCAAGGGCAGCACTTGTCCTGTGGAACAACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR CAA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTATTATGCACATTCCTTaGTGTTCTGACAGAGGTTTT +
Preference number: 3 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSIMHIP*CSDRGF
Trigger: AAAACCTCTGTCAGAACACAAAGGAATGTGCATAAT...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATATTATGCACATTCCTTaGTGTTCTGACAGAGGTTTT +
Preference number: 3 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYIMHIP*CSDRGF
Trigger: AAAACCTCTGTCAGAACACAAAGGAATGTGCATAAT...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CCA 72 bp AGAATACACCCAATTGTATTCAATGTTGTATGCTCATaGACAGGTAACAGACACAAAGCTACTTCATACAGT +
Preference number: 3 (lower is better)
Translates to: RIHPIVFNVVCS*TGNRHKATSYS
Trigger: ACTGTATGAAGTAGCTTTGTGTCTGTTACCTGTCCATGAGCATACAACATTGAATACAATTGGGTGTATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR-3UTR CAA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTATTATGCACATTCCTTaGTGTTCTGACAGAGGTTTT +
Preference number: 3 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPIMHIP*CSDRGF
Trigger: AAAACCTCTGTCAGAACACAAAGGAATGTGCATAAT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CCA 72 bp GGAAGGTGCTATTTCAAATGGAATTCTAGTAGAACTTaGCACATACATTTTAACTTTTCAACCACCCATTAT +
Preference number: 3 (lower is better)
Translates to: GRCYFKWNSSRT*HIHFNFSTTHY
Trigger: ATAATGGGTGGTTGAAAAGTTAAAATGTATGTGCCAAGTTCTACTAGAATTCCATTTGAAATAGCACCTTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp TGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTGCGGTCCGCGCTGATGTaGGGGGCTAGGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: CFFLNFKGSGSPGIAPTLRSALM*GARGTG
Trigger: ACCGGTGCCCCTAGCCCCGCACATCAGCGCGGACCG...CAGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR TCA 90 bp TGGTCTCCAAGTCCACCTGTGGTATGTCCAAGGTTTCCAAAGGGGTTCTGCGTAAGCCGCGGTCCGCGCTaGTGTGCGGGGCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: WSPSPPVVCPRFPKGFCVSRGPR*CAGLGA
Trigger: TGCCCCTAGCCCCGCACATCAGCGCGGACCGCGGCT...TACGCAGAACCCCTTTGGAAACCTTGGACATACCACAGGTGGACTTGGAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp GTGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTTCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACAT +
Preference number: 4 (lower is better)
Translates to: VLLLELQGLGQPRHCPNTSAGPG*SGVRKH
Trigger: ATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGA...AGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp GCTACCAGCCATAGGGAGACATTCGTAGTCTACGGGTGGGTTGGCTCAAAGGTCGCAGGTAAGGAACTCTaGACTCGGAGGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ATSHRETFVVYGWVGSKVAGKEL*TRRRGG
Trigger: CCCTCCCCGCCTCCGAGTGCAGAGTTCCTTACCTGC...GACCTTTGAGCCAACCCACCCGTAGACTACGAATGTCTCCCTATGGCTGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp AACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTGCTTAGAGCAGTGCACTGCTTAGAGCAGTaGTCAGTCGGCTTTACACGG +
Preference number: 4 (lower is better)
Translates to: NFKGSGSPGIAPTLLRAVHCLEQ*SVGFTR
Trigger: CCGTGTAAAGCCGACTGACCACTGCTCTAAGCAGTG...CACTGCTCTAAGCAGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGCGGTCCGCGCTGATGTaGGGGGCTAGGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWRSALM*GARGTG
Trigger: ACCGGTGCCCCTAGCCCCGCACATCAGCGCGGACCG...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATAGCCGCGGTCCGCGCTaGTGTGCGGGGCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNSRGPR*CAGLGA
Trigger: TGCCCCTAGCCCCGCACATCAGCGCGGACCGCGGCT...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACGGTCCGCGCTGATGTaGGGGGCTAGGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTRSALM*GARGTG
Trigger: ACCGGTGCCCCTAGCCCCGCACATCAGCGCGGACCG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TCCCCTCATGAGAAGTCCAGGTGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCGCATTGCCCCAACACTaGTTAGAGCAGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SPHEKSRCFFLNFKGSGSALPQH*LEQWSV
Trigger: GACTGACCACTGCTCTAAGCAGTGTTGGGGCAATGC...GCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCACCTGGACTTCTCATGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAGGTCGTCCTTCTGGCTaGCGAACTTCCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGGRPSG*RTSRGR
Trigger: GCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACC...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCCTGGCGCTCGCAGCCTaGCAGGTCGTCCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVILALAA*QVVLLA
Trigger: AGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAG...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGGCCAGGTCGTCCTTCTaGCTGCCGAACTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWARSSF*LPNFPR
Trigger: CCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGC...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp TGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTGCTCCAAGTCCACCTGTaGTATGTCCAAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: CFFLNFKGSGSPGIAPTLLQVHL*YVQGFQ
Trigger: TTGGAAACCTTGGACATACCACAGGTGGACTTGGAG...CAGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
3UTR CAA 72 bp ACTTGCCACACACAGTTCTTATTAGGAGGGTACTCCTaGGGCCAGCCAGGGGTGGTTATGGTGCCGTTAAGT +
Preference number: 4 (lower is better)
Translates to: TCHTQFLLGGYS*GQPGVVMVPLS
Trigger: ACTTAACGGCACCATAACCACCCCTGGCTGGCCCAAGGAGTACCCTCCTAATAAGAACTGTGTGTGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp CCACCTGTGGTATGTCCAAGGTTTCCAAAGGGGTTCTGCGTAAGGTCAATTGTCGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PPVVCPRFPKGFCVRSIVGPSLL*HSMVSK
Trigger: CTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCC...GACAATTGACCTTACGCAGAACCCCTTTGGAAACCTTGGACATACCACAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCCCCGCGGGCTCAGCTaGCACCAGAGCTCGGACTCC +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFPRGLS*HQSSDS
Trigger: GGAGTCCGAGCTCTGGTGGCAGCTGAGCCCGCGGGG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCGGTCGTCCTTCTGGCTaGCGAACTTCCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSGRPSG*RTSRGR
Trigger: GCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACC...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCGGTCCGCGCTGATGTaGGGGGCTAGGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFRSALM*GARGTG
Trigger: ACCGGTGCCCCTAGCCCCGCACATCAGCGCGGACCG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACGGTCCGCGCTGATGTaGGGGGCTAGGGGCACCGGT +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLRSALM*GARGTG
Trigger: ACCGGTGCCCCTAGCCCCGCACATCAGCGCGGACCG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCTCTGTACTGGGTTGGTaGAACCACTTGCCACACACA +
Preference number: 4 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFSVLGW*NHLPHT
Trigger: TGTGTGTGGCAAGTGGTTGCACCAACCCAGTACAGA...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACAGCCAGGTCGTCCTTCTaGCTGCCGAACTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTARSSF*LPNFPR
Trigger: CCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGC...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTTTCTTTGACATAGCATaGTCTCCAAGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: VLLLELQGLGQPRHCPNTFFDIA*SPSPPV
Trigger: CACAGGTGGACTTGGAGACCATGCTATGTCAAAGAA...AGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR CCA 90 bp AGACATCGCTGCTCACAGCCTCCACGGTCAGGTTTGGCACACTCATCTTCCTCTGCATTCTTTCCTGCTTaGGTACTTGTCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RHRCSQPPRSGLAHSSSSAFFPA*VLVWPV
Trigger: AACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGC...AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGGCTGTGAGCAGCGATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp TGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTGTTTCCAAAGGGGTTCTaGGTAAGGTCAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: CFFLNFKGSGSPGIAPTLFPKGF*VRSIVL
Trigger: TAGGACAATTGACCTTACGCAGAACCCCTTTGGAAA...CAGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR CCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCCTCCAAGTCCACCTGTaGTATGTCCAAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFLQVHL*YVQGFQ
Trigger: TTGGAAACCTTGGACATACCACAGGTGGACTTGGAG...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CAA 72 bp CGATATCTCCTTTGCTTAGACGGGTTCGCTGACCAATaGCAGGACGTATGCCATTATCATCACGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RYLLCLDGFADQ*QDVCHYHHGRG
Trigger: TCCCCTCCCGTGATGATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
3UTR CAA 72 bp GCCCGGATCCACAGAATCGACCAAGCCCCACAGCTGTaGAATCAAGACCATCAAAGAGCTCCACATAGTCAT +
Preference number: 4 (lower is better)
Translates to: ARIHRIDQAPQL*NQDHQRAPHSH
Trigger: ATGACTATGTGGAGCTCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTTGGTCGATTCTGTGGATCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp TATCTCCTTTGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATGCCATTATGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: YLLCLDGFADQLQDVCHYGPSLL*HSMVSK
Trigger: CTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCC...ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp GGACGTATGCCATTATCATCACGGGAGGGGAGAATGGTATCCAGAAACATCCCCTATTCTTTCCGTTCTTaGTGTAGCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GRMPLSSREGRMVSRNIPYSFRS*CSGSGN
Trigger: GTTCCCAGAGCCGCTACATCAAGAACGGAAAGAATA...GGGGATGTTTCTGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGGCCAGGAGTGGCGCTaGTTTCCCAAGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: NSLKANLIRWPGVALISQGQEWR*FPKCIL
Trigger: AAGAATGCACTTGGGAAATCAGCGCCACTCCTGGCC...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp AGACATCGCTGCTCACAGCCTCCACGGTCAGGTTTGGCACACTCATCTTCCTCTTTCTTGGATTTGGTGTaGAAAGGCAGCACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RHRCSQPPRSGLAHSSSSFLDLV*KGSTSK
Trigger: TTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGAA...AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGGCTGTGAGCAGCGATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCTGGCGCTCGCAGCCTaGCAGGTCGTCCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSLALAA*QVVLLA
Trigger: AGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTGCAGGTAAGGAACTCTaGACTCGGAGGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVAGKEL*TRRRGG
Trigger: CCCTCCCCGCCTCCGAGTGCAGAGTTCCTTACCTGC...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCTCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACAT +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSSAGPG*SGVRKH
Trigger: ATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGA...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCCAGAAACTCTCCAGATaGAGTGTGTGTAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFQKLSR*SVCKKG
Trigger: ACCCTTCTTACACACACTGCATCTGGAGAGTTTCTG...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAAGACCGAGGAAGGGGGTaGGGGCCAGGCATTTCTACG +
Preference number: 4 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSEDRGRG*GPGIST
Trigger: CGTAGAAATGCCTGGCCCCCACCCCCTTCCTCGGTC...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGCCAGGTCGTCCTTCTaGCTGCCGAACTTCCCGCGG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSARSSF*LPNFPR
Trigger: CCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGC...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCGTCGCAGGGAGAAGTTaGCTAGGGGCCCACGGGTGG +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSVAGRS*LGAHGW
Trigger: CCACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGAC...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGTCGCAGGGAGAAGTTaGCTAGGGGCCCACGGGTGG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSVAGRS*LGAHGW
Trigger: CCACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGAC...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCGTCGCAGGGAGAAGTTaGCTAGGGGCCCACGGGTGG +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPVAGRS*LGAHGW
Trigger: CCACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGAC...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTCCGATAGAGATTGCCTaGGGTCCATTTCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASPIEIA*GPFPRR
Trigger: TCGGCGAGGAAATGGACCTCAGGCAATCTCTATCGG...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCCTGCTCAAAGGACTaGAAGGTCAGCCCGACGTGG +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTSCSKD*KVSPTW
Trigger: CCACGTCGGGCTGACCTTTCAGTCCTTTGAGCAGGA...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507499.5
CDS-3UTR GCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTGGTCGTCCTTCTGGCTaGCGAACTTCCCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPGRPSG*RTSRGR
Trigger: GCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACC...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAACTGGCGCTCGCAGCCTaGCAGGTCGTCCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VYDALSPALLIPSSMEFKLALAA*QVVLLA
Trigger: AGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAG...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGCAGGTAAGGAACTCTaGACTCGGAGGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSAGKEL*TRRRGG
Trigger: CCCTCCCCGCCTCCGAGTGCAGAGTTCCTTACCTGC...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATGTCCAAGGTTTCCAAAGGGGTTCTGCGTAAGGTCAATTGTCCTATCTATTTGCCGGAAACATGTGGATaGCGCCGGGACAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: MSKVSKGVLRKVNCPIYLPETCG*RRDSRE
Trigger: CTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGG...CAAATAGATAGGACAATTGACCTTACGCAGAACCCCTTTGGAAACCTTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACAT +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPSAGPG*SGVRKH
Trigger: ATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGA...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATACAGTGCCTCATGGCCTaGTTGAACATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIQCLMA*LNMALW
Trigger: CCAGAGAGCCATGTTCAAGCAGGCCATGAGGCACTG...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTGTGTTCAGACATCGCTaGTCACAGCCTCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASVFRHR*SQPPRS
Trigger: TGACCGTGGAGGCTGTGAGCAGCGATGTCTGAACAC...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGTGTTCAGACATCGCTaGTCACAGCCTCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIVFRHR*SQPPRS
Trigger: TGACCGTGGAGGCTGTGAGCAGCGATGTCTGAACAC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTAGGCAAACTCGGCTCTaGCGGCGCTGGCGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPRQTRL*RRWRSQ
Trigger: CTGCGAGCGCCAGCGCCGCCAGAGCCGAGTTTGCCT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGACCGATAGAGATTGCCTaGGGTCCATTTCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGPIEIA*GPFPRR
Trigger: TCGGCGAGGAAATGGACCTCAGGCAATCTCTATCGG...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGCTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATG +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWLRRVR*PIAGRM
Trigger: CATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAG...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ATGTCCAAGGTTTCCAAAGGGGTTCTGCGTAAGGTCAATTGTCCTATCTATTTGCCAGGTGCTTCTTCTTaGACTTCAAGGGCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: MSKVSKGVLRKVNCPIYLPGASS*TSRARA
Trigger: TGCCCGAGCCCTTGAAGTTCAAGAAGAAGCACCTGG...CAAATAGATAGGACAATTGACCTTACGCAGAACCCCTTTGGAAACCTTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR GCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTCCGGAAACATGTGGATaGCGCCGGGACAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVPETCG*RRDSRE
Trigger: CTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGG...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATCCGGAAACATGTGGATaGCGCCGGGACAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNPETCG*RRDSRE
Trigger: CTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGG...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAATCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACAT +
Preference number: 4 (lower is better)
Translates to: VYDALSPALLIPSSMEFKSAGPG*SGVRKH
Trigger: ATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGA...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGACAGTGCCTCATGGCCTaGTTGAACATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGQCLMA*LNMALW
Trigger: CCAGAGAGCCATGTTCAAGCAGGCCATGAGGCACTG...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TATCTCCTTTGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATGCCATTATCTTGCCGATAGAGATTaGCTGAGGTCCATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: YLLCLDGFADQLQDVCHYLADRD*LRSISS
Trigger: CGAGGAAATGGACCTCAGGCAATCTCTATCGGCAAG...ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGTGCGATATCTCCTTTaGTTAGACGGGTTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: NSLKANLIRWPGVALISQVRYLL*LDGFAD
Trigger: GTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCAC...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACACGGGAGGGGAGAATaGTATCCAGAAACATCCCCC +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTHGRGE*YPETSP
Trigger: GGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCAGGAAAGGTTGCCATTaGATTCTTGTAGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFRKGCH*ILVEFL
Trigger: GAGAAACTCTACAAGAATCCAATGGCAACCTTTCCT...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAGGTGATGAGGCCACTTaGACTGTGGATCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPGDEAT*TVDLLF
Trigger: GAACAGAAGATCCACAGTCCAAGTGGCCTCATCACC...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGGTGATGAGGCCACTTaGACTGTGGATCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: NSLKANLIRWPGVALISQGDEAT*TVDLLF
Trigger: GAACAGAAGATCCACAGTCCAAGTGGCCTCATCACC...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTGCTTGGGTACTTGTCTaGCCAGTTGGGACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASAWVLV*PVGTGD
Trigger: ATCACCAGTCCCAACTGGCCAGACAAGTACCCAAGC...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAGCTAATTTGATTCGGTaGCCAGGAGTGGCGCTGATT +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPANLIR*PGVALI
Trigger: AATCAGCGCCACTCCTGGCCACCGAATCAAATTAGC...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GCTACCAGCCATAGGGAGACATTCGTAGTCTACGGGTGGGTTGGCTCAAAGGTCAATGTTGTATGCTCATaGACAGGTAACAGACACAAA +
Preference number: 4 (lower is better)
Translates to: ATSHRETFVVYGWVGSKVNVVCS*TGNRHK
Trigger: TTTGTGTCTGTTACCTGTCCATGAGCATACAACATT...GACCTTTGAGCCAACCCACCCGTAGACTACGAATGTCTCCCTATGGCTGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATGCAGCTCCGAGAAGATaGATCCGGTCTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNAAPRR*IRSAHQ
Trigger: CTGATGTGCAGACCGGATTCATCTTCTCGGAGCTGC...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNGPSLL*HSMVSK
Trigger: CTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCC...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGATCAATCTCAAAGGACTaGAAGGTCAGCCCGACGTGG +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGSISKD*KVSPTW
Trigger: CCACGTCGGGCTGACCTTTCAGTCCTTTGAGATTGA...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000509505.5
CDS-3UTR TCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAAAGCCCCACAGCTGTTaGATCAAGACCATCAAAGAG +
Preference number: 4 (lower is better)
Translates to: NSLKANLIRWPGVALISQKPHSC*IKTIKE
Trigger: CTCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTT...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCCGGAAACATGTGGATaGCGCCGGGACAGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPPETCG*RRDSRE
Trigger: CTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACAT +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLSAGPG*SGVRKH
Trigger: ATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGTGCGATATCTCCTTTaGTTAGACGGGTTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIVRYLL*LDGFAD
Trigger: GTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCAC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCACGCTTCATAGACAGCTaGAAAGCCTTTTCCTACCCA +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPRFIDS*KAFSYP
Trigger: TGGGTAGGAAAAGGCTTTGCAGCTGTCTATGAAGCG...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TATCTCCTTTGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATGCCATTATGTTAGCAGCAAACCCTaGTTTGTTCACAGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: YLLCLDGFADQLQDVCHYVSSKP*FVHSSV
Trigger: GACGGAACTGTGAACAAAGCAGGGTTTGCTGCTAAC...ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCACGGGAGGGGAGAATaGTATCCAGAAACATCCCCC +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSHGRGE*YPETSP
Trigger: GGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAAACAATCTTCTCCCCTaGGGTCACAGAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPNNLLP*GHRNSP
Trigger: TGGAGAGTTTCTGTGACCCCAGGGGAGAAGATTGTT...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGCTAATTTGATTCGGTaGCCAGGAGTGGCGCTGATT +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIANLIR*PGVALI
Trigger: AATCAGCGCCACTCCTGGCCACCGAATCAAATTAGC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAATCCCTGGATTCTCCTaGTGCTCCTGCTCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGIPGFS*CSCSKD
Trigger: GTCCTTTGAGCAGGAGCACCAGGAGAATCCAGGGAT...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507499.5
CDS-3UTR TCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSGPSLL*HSMVSK
Trigger: CTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCC...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTAGGCCCCTCGCTTCTTTaGCATAGCATGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLGPSLL*HSMVSK
Trigger: CTTGGAGACCATGCTATGTCAAAGAAGCGAGGGGCC...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCGGCCAGGAGTGGCGCTaGTTTCCCAAGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFGQEWR*FPKCIL
Trigger: AAGAATGCACTTGGGAAATCAGCGCCACTCCTGGCC...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCGGCCAGGAGTGGCGCTaGTTTCCCAAGTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSGQEWR*FPKCIL
Trigger: AAGAATGCACTTGGGAAATCAGCGCCACTCCTGGCC...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATCGTCCAAGAATCGGTaGCTTTTCTGTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPSSKNR*LFCFSI
Trigger: GATGGAGAAACAGAAAAGTCACCGATTCTTGGACGA...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGCAGCAGCAGTAACTTaGGTAATGAACCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIAAAVT*VMNHPD
Trigger: GTCTGGATGGTTCATTACTCAAGTTACTGCTGCTGC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGAGACCTTAAAAGCCTaGAGAAGCCAGCAAAGCAAC +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIETLKA*RSQQSN
Trigger: GTTGCTTTGCTGGCTTCTGCAGGCTTTTAAGGTCTC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCAGTGCCTCATGGCCTaGTTGAACATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSQCLMA*LNMALW
Trigger: CCAGAGAGCCATGTTCAAGCAGGCCATGAGGCACTG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGACTTGCCGATAGAGATTaGCTGAGGTCCATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGLADRD*LRSISS
Trigger: CGAGGAAATGGACCTCAGGCAATCTCTATCGGCAAG...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATACAATTGCAGGACGTATaGCATTATCATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIQLQDV*HYHHGR
Trigger: CCTCCCGTGATGATAATGGCATACGTCCTGCAATTG...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGTGCATTCTATACAGCTTTCTTaGCTGTGCGATATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKANLIRWPGVALISQVHSIQLS*LCDISF
Trigger: AAAGGAGATATCGCACAGGCAAGAAAGCTGTATAGA...ATGCACTTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCCGCTTCATAGACAGCTaGAAAGCCTTTTCCTACCCA +
Preference number: 4 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVIRFIDS*KAFSYP
Trigger: TGGGTAGGAAAAGGCTTTGCAGCTGTCTATGAAGCG...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGTGTTCAGACATCGCTaGTCACAGCCTCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYVFRHR*SQPPRS
Trigger: TGACCGTGGAGGCTGTGAGCAGCGATGTCTGAACAC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AATTCACTAAAGGCTAATTTGATTCGGTGGCCAGGAGTGGCGCTGATTTCCCAAGTCATAGCCACAGTCTaGTTCTTCCTCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: NSLKANLIRWPGVALISQVIATV*FFLHFK
Trigger: TTTGAAGTGGAGGAAGAAGCAGACTGTGGCTATGAC...TTGGGAAATCAGCGCCACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTTGAACATGGCTCTCTaGCTGCCAGTGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASLNMAL*LPVKFP
Trigger: AGGAAACTTCACTGGCAGCCAGAGAGCCATGTTCAA...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCTTGAACATGGCTCTCTaGCTGCCAGTGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVILNMAL*LPVKFP
Trigger: AGGAAACTTCACTGGCAGCCAGAGAGCCATGTTCAA...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCACGGGAGGGGAGAATaGTATCCAGAAACATCCCCC +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPHGRGE*YPETSP
Trigger: GGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCAACAATCTTCTCCCCTaGGGTCACAGAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVINNLLP*GHRNSP
Trigger: TGGAGAGTTTCTGTGACCCCAGGGGAGAAGATTGTT...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACTCCACGGTCAGGTTTaGCACACTCATCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTLHGQV*HTHLPL
Trigger: AAGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATCTCCACGGTCAGGTTTaGCACACTCATCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHLHGQV*HTHLPL
Trigger: AAGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAG...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCGCTTGGGTACTTGTCTaGCCAGTTGGGACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSAWVLV*PVGTGD
Trigger: ATCACCAGTCCCAACTGGCCAGACAAGTACCCAAGC...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCGCTTGGGTACTTGTCTaGCCAGTTGGGACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFAWVLV*PVGTGD
Trigger: ATCACCAGTCCCAACTGGCCAGACAAGTACCCAAGC...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAAGTCTACGGGTGGGTTaGCTCAAAGGTCAAAAACTT +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPSLRVG*LKGQKL
Trigger: AAGTTTTTGACCTTTGAGCCAACCCACCCGTAGACT...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR CAA 72 bp TTATTTCCAGTAGCCACAAGGGGATCTGGTATCTTGTaGCCACACAGTCGTCCAAGAATCGGTGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: LFPVATRGSGIL*PHSRPRIGDFS
Trigger: AGAAAAGTCACCGATTCTTGGACGACTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCTACTGGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATATTCTTTCCGTTCTTaGTGTAGCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTYSFRS*CSGSGN
Trigger: GTTCCCAGAGCCGCTACATCAAGAACGGAAAGAATA...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATCAGAAACATCCCCCTTaGGAAGGTGTTCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNQKHPP*EGVPGI
Trigger: TATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTG...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATG +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSLRRVR*PIAGRM
Trigger: CATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCTCTACCAAGGAGAGGTaGTTTTCTCCAGTACCCGTC +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSSTKER*FSPVPV
Trigger: GACGGGTACTGGAGAAAATCACCTCTCCTTGGTAGA...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTTCTACCAAGGAGAGGTaGTTTTCTCCAGTACCCGTC +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVSTKER*FSPVPV
Trigger: GACGGGTACTGGAGAAAATCACCTCTCCTTGGTAGA...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTCAATCTCAAAGGACTaGAAGGTCAGCCCGACGTGG +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPSISKD*KVSPTW
Trigger: CCACGTCGGGCTGACCTTTCAGTCCTTTGAGATTGA...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000509505.5
CDS-3UTR TCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTCGTCCAAGAATCGGTaGCTTTTCTGTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASSSKNR*LFCFSI
Trigger: GATGGAGAAACAGAAAAGTCACCGATTCTTGGACGA...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCACAGATCTCTTGGTTTTaGTTCTGCTTTCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPQISWF*FCFQSS
Trigger: GGACGATTGAAAGCAGAATCAAAACCAAGAGATCTG...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTCTTGGATTTGGTGTaGAAAGGCAGCACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPFLDLV*KGSTSK
Trigger: TTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGAA...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACAGGTTCGCTGACCAATTaGAGGACGTATGCCATTATC +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTGSLTN*RTYAII
Trigger: GATAATGGCATACGTCCTGCAATTGGTCAGCGAACC...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATGGTTCGCTGACCAATTaGAGGACGTATGCCATTATC +
Preference number: 4 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHGSLTN*RTYAII
Trigger: GATAATGGCATACGTCCTGCAATTGGTCAGCGAACC...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTCAGAAACTCTCCAGATaGAGTGTGTGTAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASQKLSR*SVCKKG
Trigger: ACCCTTCTTACACACACTGCATCTGGAGAGTTTCTG...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCACTACCCAATTACTGCTaGTACGAAACTCAATCCACA +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPLPNYC*YETQST
Trigger: TGTGGATTGAGTTTCGTAGCAGCAGTAATTGGGTAG...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACGCTTCATAGACAGCTaGAAAGCCTTTTCCTACCCA +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTRFIDS*KAFSYP
Trigger: TGGGTAGGAAAAGGCTTTGCAGCTGTCTATGAAGCG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAGTTAGCAGCAAACCCTaGTTTGTTCACAGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGVSSKP*FVHSSV
Trigger: GACGGAACTGTGAACAAAGCAGGGTTTGCTGCTAAC...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTAGGCACACTGGTAACTaGCCAGAGTGTTCAGACATC +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVRHTGN*PECSDI
Trigger: GATGTCTGAACACTCTGGGCAGTTACCAGTGTGCCT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCAGGCACACTGGTAACTaGCCAGAGTGTTCAGACATC +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSRHTGN*PECSDI
Trigger: GATGTCTGAACACTCTGGGCAGTTACCAGTGTGCCT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCACCACAGAATTTGCCATaGAGTTTAGACTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPPQNLP*SLDSEE
Trigger: TTCCTCTGAGTCTAAACTGCATGGCAAATTCTGTGG...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAAAGTGCATTCTTTCCTaGTTGGGTACTTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGKCILS*LGTCLA
Trigger: GGCCAGACAAGTACCCAAGCAGGAAAGAATGCACTT...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGGATCTGGTATCTTGTTaGCACACAGTCGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWDLVSC*HTVVQE
Trigger: TTCTTGGACGACTGTGTGGCAACAAGATACCAGATC...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTGTCATAGCCACAGTCTaGTTCTTCCTCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASVIATV*FFLHFK
Trigger: TTTGAAGTGGAGGAAGAAGCAGACTGTGGCTATGAC...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCCCGACGTGGTAGCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGTCTTCTCTCCATTATaGACATTCCTTTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARRGSSQTLLFSTHILSSVFSPL*TFLCVL
Trigger: CAGAACACAAAGGAATGTGCATAATGGAGAGAAGAC...CGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGCTACCACGTCGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTGTTCCACAGGACAAGTaGTGCCCTTGCAATGATATA +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASVPQDK*CPCNDI
Trigger: TATATCATTGCAAGGGCAGCACTTGTCCTGTGGAAC...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACTCCAAGTCCACCTGTaGTATGTCCAAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTLQVHL*YVQGFQ
Trigger: TTGGAAACCTTGGACATACCACAGGTGGACTTGGAG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTTCTTTGACATAGCATaGTCTCCAAGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASFFDIA*SPSPPV
Trigger: CACAGGTGGACTTGGAGACCATGCTATGTCAAAGAA...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAGCCATTGGGAAATCCTaGAGAGGAAAGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGAIGKS*RGKVAI
Trigger: AATGGCAACCTTTCCTCTCCAGGATTTCCCAATGGC...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGACAGAAATTCTGTACTaGGTTGGTGCAACCACTTGC +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWTEILY*VGATTC
Trigger: GCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGT...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCACTCATATTGTTGAACTaGGATGTGATCACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPLILLN*DVITSG
Trigger: GCCTGAAGTGATCACATCCCAGTTCAACAATATGAG...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAAGGCCACTTGGACTGTaGATCTTCTGTTCACACTCA +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGRPLGL*IFCSHS
Trigger: TGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCT...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAAAACTCAAACTTCACAGAAATTCTGTACTGGGTTGGTGCAACCACTTGCCACAGGCCACTTGGACTGTaGATCTTCTGTTCACACTCA +
Preference number: 4 (lower is better)
Translates to: KNSNFTEILYWVGATTCHRPLGL*IFCSHS
Trigger: TGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCT...GTGGCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGTGAAGTTTGAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATGGTGATGAGGCCACTTaGACTGTGGATCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNGDEAT*TVDLLF
Trigger: GAACAGAAGATCCACAGTCCAAGTGGCCTCATCACC...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACAGCATTCTTTCCTGCTTaGGTACTTGTCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTAFFPA*VLVWPV
Trigger: AACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGC...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCGCTAATTTGATTCGGTaGCCAGGAGTGGCGCTGATT +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFANLIR*PGVALI
Trigger: AATCAGCGCCACTCCTGGCCACCGAATCAAATTAGC...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCAGCCACAAGGGGATCTaGTATCTTGTTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSSHKGI*YLVATQ
Trigger: CTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CAA 72 bp ATTTTATTTCCAGTAGCCACAAGGGGATCTGGTATCTaGTTGCCACACAGTCGTCCAAGAATCGGTGACTTT +
Preference number: 4 (lower is better)
Translates to: ILFPVATRGSGI*LPHSRPRIGDF
Trigger: AAAGTCACCGATTCTTGGACGACTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCTACTGGAAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTGCAGCTCCGAGAAGATaGATCCGGTCTGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPAAPRR*IRSAHQ
Trigger: CTGATGTGCAGACCGGATTCATCTTCTCGGAGCTGC...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACCGATAGAGATTGCCTaGGGTCCATTTCCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLPIEIA*GPFPRR
Trigger: TCGGCGAGGAAATGGACCTCAGGCAATCTCTATCGG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCAGAAACATCCCCCTTaGGAAGGTGTTCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSQKHPP*EGVPGI
Trigger: TATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCTCTACCAAGGAGAGGTaGTTTTCTCCAGTACCCGTC +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSSTKER*FSPVPV
Trigger: GACGGGTACTGGAGAAAATCACCTCTCCTTGGTAGA...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGTTGACACATTCGTGCTaGCATCCACCATTATCCTTA +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWLTHSC*HPPLSL
Trigger: TAAGGATAATGGTGGATGTCAGCACGAATGTGTCAA...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTTGACACATTCGTGCTaGCATCCACCATTATCCTTA +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASLTHSC*HPPLSL
Trigger: TAAGGATAATGGTGGATGTCAGCACGAATGTGTCAA...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCAAGCCCCACAGCTGTTaGATCAAGACCATCAAAGAG +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFKPHSC*IKTIKE
Trigger: CTCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGAAATCCCTTCTTGTTaGTTGTGTCATCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIEIPSC*LCHQCG
Trigger: TCCACACTGATGACACAATCAACAAGAAGGGATTTC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGCAGGGTCACAGTTCCTaGATTAAACTGTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWQGHSS*IKLSEL
Trigger: CAATTCAGACAGTTTAATTCAGGAACTGTGACCCTG...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTAAGATGAATCCGGTCTaGACATCAGCACATCTGAAT +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASKMNPV*TSAHLN
Trigger: ATTCAGATGTGCTGATGTGCAGACCGGATTCATCTT...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GGAAGGATAATTCAAGTCGAGAGCCCCGTTCTGATACTAATAGCCATTCACAGTAAGATGAATCCGGTCTaGACATCAGCACATCTGAAT +
Preference number: 4 (lower is better)
Translates to: GRIIQVESPVLILIAIHSKMNPV*TSAHLN
Trigger: ATTCAGATGTGCTGATGTGCAGACCGGATTCATCTT...ACTGTGAATGGCTATTAGTATCAGAACGGGGCTCTCGACTTGAATTATCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACAGTGCCTCATGGCCTaGTTGAACATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLQCLMA*LNMALW
Trigger: CCAGAGAGCCATGTTCAAGCAGGCCATGAGGCACTG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCTTGCCGATAGAGATTaGCTGAGGTCCATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSLADRD*LRSISS
Trigger: CGAGGAAATGGACCTCAGGCAATCTCTATCGGCAAG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACTTGCCGATAGAGATTaGCTGAGGTCCATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLLADRD*LRSISS
Trigger: CGAGGAAATGGACCTCAGGCAATCTCTATCGGCAAG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCAATTGCAGGACGTATaGCATTATCATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSQLQDV*HYHHGR
Trigger: CCTCCCGTGATGATAATGGCATACGTCCTGCAATTG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAAGGTTCGCTGACCAATTaGAGGACGTATGCCATTATC +
Preference number: 4 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSEGSLTN*RTYAII
Trigger: GATAATGGCATACGTCCTGCAATTGGTCAGCGAACC...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGTGCGATATCTCCTTTaGTTAGACGGGTTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYVRYLL*LDGFAD
Trigger: GTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCAC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTCTACCCAATTACTGCTaGTACGAAACTCAATCCACA +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASLPNYC*YETQST
Trigger: TGTGGATTGAGTTTCGTAGCAGCAGTAATTGGGTAG...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCTTCCTACCCAATTACTaGTGCTACGAAACTCAATCC +
Preference number: 4 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVIFLPNY*CYETQS
Trigger: GGATTGAGTTTCGTAGCAGCAGTAATTGGGTAGGAA...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATCTGTACTGGGTTGGTaGAACCACTTGCCACACACA +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLISVLGW*NHLPHT
Trigger: TGTGTGTGGCAAGTGGTTGCACCAACCCAGTACAGA...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTCTGTACTGGGTTGGTaGAACCACTTGCCACACACA +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYSVLGW*NHLPHT
Trigger: TGTGTGTGGCAAGTGGTTGCACCAACCCAGTACAGA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTAAAGTGCATTCTTTCCTaGTTGGGTACTTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HTVVQESVTFLFLHQILLKCILS*LGTCLA
Trigger: GGCCAGACAAGTACCCAAGCAGGAAAGAATGCACTT...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR GCA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATATGTCAAAAAGAACACTaGAGGGTCACAGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SRQSFRRILLTPLRSFLICQKEH*RVTVPE
Trigger: TTCAGGAACTGTGACCCTGCAGTGTTCTTTTTGACA...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCCCACAGGACAAGTGCTaGCCTTGCAATGATATACTC +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFPQDKC*PCNDIL
Trigger: GAGTATATCATTGCAAGGGCAGCACTTGTCCTGTGG...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCCTCCAAGTCCACCTGTaGTATGTCCAAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFLQVHL*YVQGFQ
Trigger: TTGGAAACCTTGGACATACCACAGGTGGACTTGGAG...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACACGGGAGGGGAGAATaGTATCCAGAAACATCCCCC +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLHGRGE*YPETSP
Trigger: GGGGGATGTTTCTGGATACCATTCTCCCCTCCCGTG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTGCCATTGGGAAATCCTaGAGAGGAAAGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVAIGKS*RGKVAI
Trigger: AATGGCAACCTTTCCTCTCCAGGATTTCCCAATGGC...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCAATTCTGTACTGGGTTaGTGCAACCACTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFNSVLG*CNHLPH
Trigger: GTGTGGCAAGTGGTTGCACCAACCCAGTACAGAATT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCAGGCCACTTGGACTGTaGATCTTCTGTTCACACTCA +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFRPLGL*IFCSHS
Trigger: TGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATAGCCACAAGGGGATCTaGTATCTTGTTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYSHKGI*YLVATQ
Trigger: CTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCT...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTAGCCACAAGGGGATCTaGTATCTTGTTGCCACACAG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSSHKGI*YLVATQ
Trigger: CTGTGTGGCAACAAGATACCAGATCCCCTTGTGGCT...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACAGGCTTCTTGGATTTaGTGTGAAAAGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTQASWI*CEKAAL
Trigger: AAGTGCTGCCTTTTCACACCAAATCCAAGAAGCCTG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCAAGAGAGCAAAAGTGTaGGGATTTGGGGATGCACTG +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPKRAKV*GFGDAL
Trigger: CAGTGCATCCCCAAATCCTCACACTTTTGCTCTCTT...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTATTCTTTCCGTTCTTaGTGTAGCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPYSFRS*CSGSGN
Trigger: GTTCCCAGAGCCGCTACATCAAGAACGGAAAGAATA...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTATATTCTTTCCGTTCTTaGTGTAGCGGCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLYSFRS*CSGSGN
Trigger: GTTCCCAGAGCCGCTACATCAAGAACGGAAAGAATA...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTCTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATG +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPLRRVR*PIAGRM
Trigger: CATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAG...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACTTAGACGGGTTCGCTaGCCAATTGCAGGACGTATG +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLLRRVR*PIAGRM
Trigger: CATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATAAAGCCCCACAGCTGTTaGATCAAGACCATCAAAGAG +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLIKPHSC*IKTIKE
Trigger: CTCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTT...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATGAAATCCCTTCTTGTTaGTTGTGTCATCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHEIPSC*LCHQCG
Trigger: TCCACACTGATGACACAATCAACAAGAAGGGATTTC...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCAAACTGTCTGAATTGTaGGGCATCTATTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVIKLSEL*GIYFKL
Trigger: CAGCTTGAAATAGATGCCTCACAATTCAGACAGTTT...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGATTCTTGGATTTGGTGTaGAAAGGCAGCACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGFLDLV*KGSTSK
Trigger: TTTGGAAGTGCTGCCTTTTCACACCAAATCCAAGAA...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTAGCAGCAGCAGTAACTTaGGTAATGAACCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALAAAVT*VMNHPD
Trigger: GTCTGGATGGTTCATTACTCAAGTTACTGCTGCTGC...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGCAGCAGCAGTAACTTaGGTAATGAACCATCCAGAC +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSAAAVT*VMNHPD
Trigger: GTCTGGATGGTTCATTACTCAAGTTACTGCTGCTGC...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACAATTGCAGGACGTATaGCATTATCATCACGGGAGG +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLQLQDV*HYHHGR
Trigger: CCTCCCGTGATGATAATGGCATACGTCCTGCAATTG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTAGGTTCGCTGACCAATTaGAGGACGTATGCCATTATC +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLGSLTN*RTYAII
Trigger: GATAATGGCATACGTCCTGCAATTGGTCAGCGAACC...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATTCCTACCCAATTACTaGTGCTACGAAACTCAATCC +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTFLPNY*CYETQS
Trigger: GGATTGAGTTTCGTAGCAGCAGTAATTGGGTAGGAA...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTGTCTTCTCTCCATTATaGACATTCCTTTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASVFSPL*TFLCVL
Trigger: CAGAACACAAAGGAATGTGCATAATGGAGAGAAGAC...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCATTCAGAAGAATCCTaGTCACACCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSHSEES*SHLFGV
Trigger: AACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACTCCAAGTCCACCTGTaGTATGTCCAAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLLQVHL*YVQGFQ
Trigger: TTGGAAACCTTGGACATACCACAGGTGGACTTGGAG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTTGAACATGGCTCTCTaGCTGCCAGTGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYLNMAL*LPVKFP
Trigger: AGGAAACTTCACTGGCAGCCAGAGAGCCATGTTCAA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTATTGAACATGGCTCTCTaGCTGCCAGTGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLLNMAL*LPVKFP
Trigger: AGGAAACTTCACTGGCAGCCAGAGAGCCATGTTCAA...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTAGCCATTGGGAAATCCTaGAGAGGAAAGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALAIGKS*RGKVAI
Trigger: AATGGCAACCTTTCCTCTCCAGGATTTCCCAATGGC...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTAGCCATTGGGAAATCCTaGAGAGGAAAGGTTGCCATT +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLAIGKS*RGKVAI
Trigger: AATGGCAACCTTTCCTCTCCAGGATTTCCCAATGGC...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATAAACAATCTTCTCCCCTaGGGTCACAGAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLINNLLP*GHRNSP
Trigger: TGGAGAGTTTCTGTGACCCCAGGGGAGAAGATTGTT...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCAATTCTGTACTGGGTTaGTGCAACCACTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPNSVLG*CNHLPH
Trigger: GTGTGGCAAGTGGTTGCACCAACCCAGTACAGAATT...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCACAGAAATTCTGTACTaGGTTGGTGCAACCACTTGC +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSTEILY*VGATTC
Trigger: GCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGCATTCTTTCCTGCTTaGGTACTTGTCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYAFFPA*VLVWPV
Trigger: AACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAAAACTCAAACTTCACAGAAATTCTGTACTGGGTTGGTGCAACCACTTGCCACACATCACAGGCTTCTTaGATTTGGTGTGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KNSNFTEILYWVGATTCHTSQAS*IWCEKA
Trigger: TGCCTTTTCACACCAAATCCAAGAAGCCTGTGATGT...GTGGCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGTGAAGTTTGAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTTTCGTAGTCTACGGGTaGGTTGGCTCAAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSFVVYG*VGSKVK
Trigger: TTTGACCTTTGAGCCAACCCACCCGTAGACTACGAA...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
3UTR CAA 72 bp TTTCAATCGTCCGCCACACTCTGTAGAATGTGTAGCTaGAAAGCCTTTTCTTTGAACAGATGCATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: FQSSATLCRMCS*KAFSLNRCIRN
Trigger: GTTTCTGATGCATCTGTTCAAAGAAAAGGCTTTCAAGCTACACATTCTACAGAGTGTGGCGGACGATTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR TCA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCACAGAAACATCCCCCTTaGGAAGGTGTTCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSQKHPP*EGVPGI
Trigger: TATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTG...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACAGAAACATCCCCCTTaGGAAGGTGTTCCTGGCATA +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLQKHPP*EGVPGI
Trigger: TATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTCGTCCAAGAATCGGTaGCTTTTCTGTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYSSKNR*LFCFSI
Trigger: GATGGAGAAACAGAAAAGTCACCGATTCTTGGACGA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCCAGATCTCTTGGTTTTaGTTCTGCTTTCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFQISWF*FCFQSS
Trigger: GGACGATTGAAAGCAGAATCAAAACCAAGAGATCTG...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCAAACTGAGCATGTaGGTACAGATCTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFTKLSM*VQISWF
Trigger: AAACCAAGAGATCTGTACTCACATGCTCAGTTTGGT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTATCTATTTCAAGCTGTaGACAAAAGCTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASIYFKL*TKACRV
Trigger: GACTCTACAAGCTTTTGTTCACAGCTTGAAATAGAT...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCTCCTCCTCCCATGCCTaGTTTAACAAGTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFSSSHA*FNKWYQ
Trigger: TTGATACCACTTGTTAAATCAGGCATGGGAGGAGGA...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCAAGATGAATCCGGTCTaGACATCAGCACATCTGAAT +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSKMNPV*TSAHLN
Trigger: ATTCAGATGTGCTGATGTGCAGACCGGATTCATCTT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCTTTCCAAAGGGGTTCTaGGTAAGGTCAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFFPKGF*VRSIVL
Trigger: TAGGACAATTGACCTTACGCAGAACCCCTTTGGAAA...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTAGTGCGATATCTCCTTTaGTTAGACGGGTTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLVRYLL*LDGFAD
Trigger: GTCAGCGAACCCGTCTAAGCAAAGGAGATATCGCAC...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTACTGGAGAGGAAAGGTTaGCATTGGATTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALLERKG*HWILVE
Trigger: CTCTACAAGAATCCAATGGCAACCTTTCCTCTCCAG...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCTGGAGAGGAAAGGTTaGCATTGGATTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSLERKG*HWILVE
Trigger: CTCTACAAGAATCCAATGGCAACCTTTCCTCTCCAG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCTGGAGAGGAAAGGTTaGCATTGGATTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFLERKG*HWILVE
Trigger: CTCTACAAGAATCCAATGGCAACCTTTCCTCTCCAG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTACAGAAACTCTCCAGATaGAGTGTGTGTAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALQKLSR*SVCKKG
Trigger: ACCCTTCTTACACACACTGCATCTGGAGAGTTTCTG...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTTTCCTACCCAATTACTaGTGCTACGAAACTCAATCC +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVFLPNY*CYETQS
Trigger: GGATTGAGTTTCGTAGCAGCAGTAATTGGGTAGGAA...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTAGGCACACTGGTAACTaGCCAGAGTGTTCAGACATC +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPRHTGN*PECSDI
Trigger: GATGTCTGAACACTCTGGGCAGTTACCAGTGTGCCT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATAGATCTGGTATCTTGTTaGCACACAGTCGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLIDLVSC*HTVVQE
Trigger: TTCTTGGACGACTGTGTGGCAACAAGATACCAGATC...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCGTCATAGCCACAGTCTaGTTCTTCCTCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPVIATV*FFLHFK
Trigger: TTTGAAGTGGAGGAAGAAGCAGACTGTGGCTATGAC...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCATTCAGAAGAATCCTaGTCACACCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSHSEES*SHLFGV
Trigger: AACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCATTCAGAAGAATCCTaGTCACACCTCTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPHSEES*SHLFGV
Trigger: AACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTCTTTGACATAGCATaGTCTCCAAGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPFFDIA*SPSPPV
Trigger: CACAGGTGGACTTGGAGACCATGCTATGTCAAAGAA...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTTTCTTTGACATAGCATaGTCTCCAAGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSFFDIA*SPSPPV
Trigger: CACAGGTGGACTTGGAGACCATGCTATGTCAAAGAA...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGATTGTACTCTTGACCTaGCTGGATGTTTTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWIVLLT*LDVFSY
Trigger: ATAAGAGAAAACATCCAGCCAGGTCAAGAGTACAAT...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCCTCATATTGTTGAACTaGGATGTGATCACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFLILLN*DVITSG
Trigger: GCCTGAAGTGATCACATCCCAGTTCAACAATATGAG...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATACAGTCAACCTGTCCTaGGTAGTTGTTATCACCAAA +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNTVNLS*VVVITK
Trigger: TTTGGTGATAACAACTACCCAGGACAGGTTGACTGT...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCACAGTCAACCTGTCCTaGGTAGTTGTTATCACCAAA +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSTVNLS*VVVITK
Trigger: TTTGGTGATAACAACTACCCAGGACAGGTTGACTGT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTTTGTCATAACCACAGAAACGCCCTATCAAAGGGCTATTTTCACTGGTTCCATTTTCAGAGGTTAAGCTaGCCTGCAAGTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: VCHNHRNALSKGYFHWFHFQRLS*PASGNN
Trigger: ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAA...ATGGAACCAGTGAAAATAGCCCTTTGATAGGGCGTTTCTGTGGTTATGACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCAGGCTTCTTGGATTTaGTGTGAAAAGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSQASWI*CEKAAL
Trigger: AAGTGCTGCCTTTTCACACCAAATCCAAGAAGCCTG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCAGGCTTCTTGGATTTaGTGTGAAAAGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSQASWI*CEKAAL
Trigger: AAGTGCTGCCTTTTCACACCAAATCCAAGAAGCCTG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTATTCTCTGGCTTTACTaGCAATCCCTGGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSILWLY*QSLDSP
Trigger: AGGAGAATCCAGGGATTGCCAGTAAAGCCAGAGAAT...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507499.5
CDS-3UTR CCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATACAACCTTCTCCCCTaGGGTCACAGAAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLYNLLP*GHRNSP
Trigger: TGGAGAGTTTCTGTGACCCCAGGGGAGAAGGTTGTA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCTTGACACATTCGTGCTaGCATCCACCATTATCCTTA +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSLTHSC*HPPLSL
Trigger: TAAGGATAATGGTGGATGTCAGCACGAATGTGTCAA...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCAGATCTCTTGGTTTTaGTTCTGCTTTCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSQISWF*FCFQSS
Trigger: GGACGATTGAAAGCAGAATCAAAACCAAGAGATCTG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTTTGTTATCACCAAACTaGGCATGTGAGTACAGATCT +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVLLSPN*ACEYRS
Trigger: AGATCTGTACTCACATGCTCAGTTTGGTGATAACAA...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTAAACTGTCTGAATTGTaGGGCATCTATTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVKLSEL*GIYFKL
Trigger: CAGCTTGAAATAGATGCCTCACAATTCAGACAGTTT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCAGGGTCACAGTTCCTaGATTAAACTGTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFQGHSS*IKLSEL
Trigger: CAATTCAGACAGTTTAATTCAGGAACTGTGACCCTG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCAGGGTCACAGTTCCTaGATTAAACTGTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSQGHSS*IKLSEL
Trigger: CAATTCAGACAGTTTAATTCAGGAACTGTGACCCTG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACAGTGCTGCCCTTGCAATaGTATACTCTTGATATATTT +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTVLPLQ*YTLDIF
Trigger: AAATATATCAAGAGTATATCATTGCAAGGGCAGCAC...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTCCCATTATTTGTCCATaGAACCTAAGGAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSPIICP*NLRKVL
Trigger: TAGCACCTTCCTTAGGTTTCATGGACAAATAATGGG...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTAACACAATCAACAGAGTaGAAATACAACCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLTQSTE*KYNLLP
Trigger: GGGGAGAAGGTTGTATTTTCACTCTGTTGATTGTGT...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR TCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACATTACATATGGCCATaGTTTCTTGGCTATGACACC +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLHYIWP*FLGYDT
Trigger: GGTGTCATAGCCAAGAAATCATGGCCATATGTAATG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTTCCAAAGGGGTTCTaGGTAAGGTCAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLIFPKGF*VRSIVL
Trigger: TAGGACAATTGACCTTACGCAGAACCCCTTTGGAAA...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTTTCCAAAGGGGTTCTaGGTAAGGTCAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYFPKGF*VRSIVL
Trigger: TAGGACAATTGACCTTACGCAGAACCCCTTTGGAAA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGACGATTTTTCTCATTTTaGCCTGAGAATTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGRFFSF*PENCRG
Trigger: ACCTCTACAATTCTCAGGGCAAAATGAGAAAAATCG...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTACTACCCAATTACTGCTaGTACGAAACTCAATCCACA +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALLPNYC*YETQST
Trigger: TGTGGATTGAGTTTCGTAGCAGCAGTAATTGGGTAG...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTGTTAGCAGCAAACCCTaGTTTGTTCACAGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPVSSKP*FVHSSV
Trigger: GACGGAACTGTGAACAAAGCAGGGTTTGCTGCTAAC...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCCACAGAATTTGCCATaGAGTTTAGACTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPPQNLP*SLDSEE
Trigger: TTCCTCTGAGTCTAAACTGCATGGCAAATTCTGTGG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCCACAGAATTTGCCATaGAGTTTAGACTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFPQNLP*SLDSEE
Trigger: TTCCTCTGAGTCTAAACTGCATGGCAAATTCTGTGG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTAAGTGCATTCTTTCCTaGTTGGGTACTTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPKCILS*LGTCLA
Trigger: GGCCAGACAAGTACCCAAGCAGGAAAGAATGCACTT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGTCAAAAAGAACACTaGAGGGTCACAGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLICQKEH*RVTVPE
Trigger: TTCAGGAACTGTGACCCTGCAGTGTTCTTTTTGACA...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATTTCCAGTTTACGACCTaGAAGATCATTTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNFQFTT*KIILCP
Trigger: GGGACATAAAATGATCTTGCAGGTCGTAAACTGGAA...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAAAACTCAAACTTCACAGAAATTCTGTACTGGGTTGGTGCAACCACTTGCCACTTAACTGTGTTGTTTTaGTCCAAGCATCAAGTCAAG +
Preference number: 4 (lower is better)
Translates to: KNSNFTEILYWVGATTCHLTVLF*SKHQVK
Trigger: CTTGACTTGATGCTTGGAGCAAAACAACACAGTTAA...GTGGCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGTGAAGTTTGAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTAGGAAAGGTTGCCATTaGATTCTTGTAGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVRKGCH*ILVEFL
Trigger: GAGAAACTCTACAAGAATCCAATGGCAACCTTTCCT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTAGTCATCAGGATAATTaGGAGACTGAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVSHQDN*ETESVL
Trigger: AAGGACAGATTCAGTCTCCCAATTATCCTGATGACT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCAGTCATCAGGATAATTaGGAGACTGAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFSHQDN*ETESVL
Trigger: AAGGACAGATTCAGTCTCCCAATTATCCTGATGACT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATAGTCATCAGGATAATTaGGAGACTGAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNSHQDN*ETESVL
Trigger: AAGGACAGATTCAGTCTCCCAATTATCCTGATGACT...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTAATTCTGTACTGGGTTaGTGCAACCACTTGCCACAC +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPNSVLG*CNHLPH
Trigger: GTGTGGCAAGTGGTTGCACCAACCCAGTACAGAATT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCCTCATATTGTTGAACTaGGATGTGATCACTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFLILLN*DVITSG
Trigger: GCCTGAAGTGATCACATCCCAGTTCAACAATATGAG...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTAACAGTCAACCTGTCCTaGGTAGTTGTTATCACCAAA +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALTVNLS*VVVITK
Trigger: TTTGGTGATAACAACTACCCAGGACAGGTTGACTGT...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAATTTCAGAGGTTAAGCTaGCCTGCAAGTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSEFQRLS*PASGNN
Trigger: ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAA...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCACATCACAGGCTTCTTaGATTTGGTGTGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPTSQAS*IWCEKA
Trigger: TGCCTTTTCACACCAAATCCAAGAAGCCTGTGATGT...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATCTCTTTCCCATTTCTaGCATATTTTGGCTAACGGG +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALSLSHF*HILANG
Trigger: CCCGTTAGCCAAAATATGCCAGAAATGGGAAAGAGA...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCGAGCATAGCTCACTATaGCCTAATAAGATGTCAATC +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSEHSSL*PNKMSI
Trigger: GATTGACATCTTATTAGGCCATAGTGAGCTATGCTC...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAAACCAAACTGAGCATGTaGGTACAGATCTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VYDALSPALLIPSSMEFKTKLSM*VQISWF
Trigger: AAACCAAGAGATCTGTACTCACATGCTCAGTTTGGT...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTGTTATCACCAAACTaGGCATGTGAGTACAGATCT +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPLLSPN*ACEYRS
Trigger: AGATCTGTACTCACATGCTCAGTTTGGTGATAACAA...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTATCTATTTCAAGCTGTaGACAAAAGCTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVIYFKL*TKACRV
Trigger: GACTCTACAAGCTTTTGTTCACAGCTTGAAATAGAT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTAAAACTGTCTGAATTGTaGGGCATCTATTTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALKLSEL*GIYFKL
Trigger: CAGCTTGAAATAGATGCCTCACAATTCAGACAGTTT...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATTTAACTGTGTTGTTTTaGTCCAAGCCAAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNLTVLF*SKPKPI
Trigger: AATTGGCTTTGGCTTGGAGCAAAACAACACAGTTAA...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000507499.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTCTATACAGCTTTCTTaGCTGTGCGATATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPSIQLS*LCDISF
Trigger: AAAGGAGATATCGCACAGGCAAGAAAGCTGTATAGA...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATCTATACAGCTTTCTTaGCTGTGCGATATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALSIQLS*LCDISF
Trigger: AAAGGAGATATCGCACAGGCAAGAAAGCTGTATAGA...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACTGGAGAGGAAAGGTTaGCATTGGATTCTTGTAGAG +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLLERKG*HWILVE
Trigger: CTCTACAAGAATCCAATGGCAACCTTTCCTCTCCAG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACAGAAACTCTCCAGATaGAGTGTGTGTAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLQKLSR*SVCKKG
Trigger: ACCCTTCTTACACACACTGCATCTGGAGAGTTTCTG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACCACATAATCATATTTaGAAACTTCATTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTPHNHI*KLHCLP
Trigger: TGGAAGGCAATGAAGTTTGCAAATATGATTATGTGG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTGATCTGGTATCTTGTTaGCACACAGTCGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPDLVSC*HTVVQE
Trigger: TTCTTGGACGACTGTGTGGCAACAAGATACCAGATC...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCGTCTTCTCTCCATTATaGACATTCCTTTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPVFSPL*TFLCVL
Trigger: CAGAACACAAAGGAATGTGCATAATGGAGAGAAGAC...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTCCAGTTTACGACCTaGAAGATCATTTTATGTCCC +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLIFQFTT*KIILCP
Trigger: GGGACATAAAATGATCTTGCAGGTCGTAAACTGGAA...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGACAAGTGCTGCCCTTaGAATGATATACTCTTGATA +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYDKCCP*NDILLI
Trigger: TATCAAGAGTATATCATTGCAAGGGCAGCACTTGTC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATTCTTTGACATAGCATaGTCTCCAAGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLFFDIA*SPSPPV
Trigger: CACAGGTGGACTTGGAGACCATGCTATGTCAAAGAA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAGTTTCTCCACATGCTaGACATCTATACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EVYDALSPALLIPSSMEFSFSTC*TSIQLS
Trigger: AGAAAGCTGTATAGATGTCCAGCATGTGGAGAAACT...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCAGTTTCTCCACATGCTaGACATCTATACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSSFSTC*TSIQLS
Trigger: AGAAAGCTGTATAGATGTCCAGCATGTGGAGAAACT...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCAGTTTCTCCACATGCTaGACATCTATACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPSFSTC*TSIQLS
Trigger: AGAAAGCTGTATAGATGTCCAGCATGTGGAGAAACT...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATAAGGAAAGGTTGCCATTaGATTCTTGTAGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TWKVQITLRRLPFHIHLIRKGCH*ILVEFL
Trigger: GAGAAACTCTACAAGAATCCAATGGCAACCTTTCCT...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCTCCACTTCAAATGTCTaGAAGGATAATTCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSSTSNV*KDNSSR
Trigger: TCGACTTGAATTATCCTTCCAGACATTTGAAGTGGA...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAAAACTCAAACTTCACAGAAATTCTGTACTGGGTTGGTGCAACCACTTGCCACCACATTCACCTTATATaGATCTGGTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: KNSNFTEILYWVGATTCHHIHLI*IWFTLY
Trigger: ATACAGTGTAAACCAGATCCATATAAGGTGAATGTG...GTGGCAAGTGGTTGCACCAACCCAGTACAGAATTTCTGTGAAGTTTGAGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTTCAGAGGTTAAGCTaGCCTGCAAGTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALFQRLS*PASGNN
Trigger: ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAA...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAAACATCACAGGCTTCTTaGATTTGGTGTGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VYDALSPALLIPSSMEFKTSQAS*IWCEKA
Trigger: TGCCTTTTCACACCAAATCCAAGAAGCCTGTGATGT...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
3UTR CAA 72 bp GGTAGCAAAAATCCAGCCAGTATAGGAATGGGATATTaGAGGGTTTTGGAAACACAATTACTTCTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GSKNPASIGMGY*RVLETQLLLIH
Trigger: ATGGATGAGAAGTAATTGTGTTTCCAAAACCCTCAAATATCCCATTCCTATACTGGCTGGATTTTTGCTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTACCAAACTGAGCATGTaGGTACAGATCTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPTKLSM*VQISWF
Trigger: AAACCAAGAGATCTGTACTCACATGCTCAGTTTGGT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCAGAAATCCCTTCTTGTTaGTTGTGTCATCAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSEIPSC*LCHQCG
Trigger: TCCACACTGATGACACAATCAACAAGAAGGGATTTC...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATCTATTTCAAGCTGTaGACAAAAGCTTGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSIYFKL*TKACRV
Trigger: GACTCTACAAGCTTTTGTTCACAGCTTGAAATAGAT...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATTTCCAAAGGGGTTCTaGGTAAGGTCAATTGTCCTA +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLFPKGF*VRSIVL
Trigger: TAGGACAATTGACCTTACGCAGAACCCCTTTGGAAA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCTTAACTGTGTTGTTTTaGTCCAAGCCAAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: VFLEVYDALSPALLIPSSLTVLF*SKPKPI
Trigger: AATTGGCTTTGGCTTGGAGCAAAACAACACAGTTAA...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000507499.5
CDS-3UTR GCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACGATTTTTCTCATTTTaGCCTGAGAATTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLRFFSF*PENCRG
Trigger: ACCTCTACAATTCTCAGGGCAAAATGAGAAAAATCG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCCACATAATCATATTTaGAAACTTCATTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSPHNHI*KLHCLP
Trigger: TGGAAGGCAATGAAGTTTGCAAATATGATTATGTGG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTATTGTACTCTTGACCTaGCTGGATGTTTTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSIVLLT*LDVFSY
Trigger: ATAAGAGAAAACATCCAGCCAGGTCAAGAGTACAAT...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTAATTGTACTCTTGACCTaGCTGGATGTTTTCTCTTAT +
Preference number: 4 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLIVLLT*LDVFSY
Trigger: ATAAGAGAAAACATCCAGCCAGGTCAAGAGTACAAT...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATCCACTTCAAATGTCTaGAAGGATAATTCAAGTCGA +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALSTSNV*KDNSSR
Trigger: TCGACTTGAATTATCCTTCCAGACATTTGAAGTGGA...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCACATTCACCTTATATaGATCTGGTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSHIHLI*IWFTLY
Trigger: ATACAGTGTAAACCAGATCCATATAAGGTGAATGTG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTGTAAGTACACTAAAGTaGTCTCAAGATCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVVSTLK*SQDHLC
Trigger: ACACAAATGATCTTGAGACCACTTTAGTGTACTTAC...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAAAGGTGCTATTTCAAATaGAATTCTAGTAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSERCYFK*NSSRTW
Trigger: CCAAGTTCTACTAGAATTCCATTTGAAATAGCACCT...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTTTGTTATCACCAAACTaGGCATGTGAGTACAGATCT +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPLLSPN*ACEYRS
Trigger: AGATCTGTACTCACATGCTCAGTTTGGTGATAACAA...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR TCA 90 bp ACAAAACGAGAACATGATGACAGTCCTCAAAGTGTAGCATGGAATTTAAAAAGATTGAGCCTCACTTTCTaGACTACAAAACGAGAACAT +
Preference number: 4 (lower is better)
Translates to: TKREHDDSPQSVAWNLKRLSLTF*TTKREH
Trigger: ATGTTCTCGTTTTGTAGTTCAGAAAGTGAGGCTCAA...TCTTTTTAAATTCCATGCTACACTTTGAGGACTGTCATCATGTTCTCGTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATCTATACAGCTTTCTTaGCTGTGCGATATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLSIQLS*LCDISF
Trigger: AAAGGAGATATCGCACAGGCAAGAAAGCTGTATAGA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCCACATAATCATATTTaGAAACTTCATTGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPPHNHI*KLHCLP
Trigger: TGGAAGGCAATGAAGTTTGCAAATATGATTATGTGG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTAAGTTTCTCCACATGCTaGACATCTATACAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLSFSTC*TSIQLS
Trigger: AGAAAGCTGTATAGATGTCCAGCATGTGGAGAAACT...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTAAGGAAAGGTTGCCATTaGATTCTTGTAGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLRKGCH*ILVEFL
Trigger: GAGAAACTCTACAAGAATCCAATGGCAACCTTTCCT...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CCA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCACATTCACCTTATATaGATCTGGTTTACACTGTAT +
Preference number: 4 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPHIHLI*IWFTLY
Trigger: ATACAGTGTAAACCAGATCCATATAAGGTGAATGTG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTAGTAAGTACACTAAAGTaGTCTCAAGATCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: TKACRVFLEVYDALSPALVSTLK*SQDHLC
Trigger: ACACAAATGATCTTGAGACCACTTTAGTGTACTTAC...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATCCTCAAAGTGTAGCATaGAATTTAAAAAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYPQSVA*NLKRAS
Trigger: ACTAGCTCTTTTTAAATTCCATGCTACACTTTGAGG...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR TCA 90 bp ACAAAACGAGAACATGATGACAGTCCTCAAAGTGTAGCATGGAATTTAAAAAGAGCACAACCAATATACTaGTGTAGGGTGGAAAATAAT +
Preference number: 4 (lower is better)
Translates to: TKREHDDSPQSVAWNLKRAQPIY*CRVENN
Trigger: ATTATTTTCCACCCTACATCAGTATATTGGTTGTGC...TCTTTTTAAATTCCATGCTACACTTTGAGGACTGTCATCATGTTCTCGTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATTAACTGTGTTGTTTTaGTCCAAGCCAAAGCCAATT +
Preference number: 4 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLLTVLF*SKPKPI
Trigger: AATTGGCTTTGGCTTGGAGCAAAACAACACAGTTAA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR GCA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCACGATTTTTCTCATTTTaGCCTGAGAATTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSRFFSF*PENCRG
Trigger: ACCTCTACAATTCTCAGGGCAAAATGAGAAAAATCG...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR GCA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTCGATTTTTCTCATTTTaGCCTGAGAATTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPRFFSF*PENCRG
Trigger: ACCTCTACAATTCTCAGGGCAAAATGAGAAAAATCG...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CCA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCAGTAAGTACACTAAAGTaGTCTCAAGATCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSVSTLK*SQDHLC
Trigger: ACACAAATGATCTTGAGACCACTTTAGTGTACTTAC...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS GCA 90 bp GGCTCAGCTGCCACCAGAGCTCGGACTCCCGCGCCGCGTCCCCGCTaGTGCCAGGACTCCGCGGCCGAGCGCGAGCCGCCGCCGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GSAATRARTPAPRPR*CQDSAAEREPPPPE
Trigger: CTCAGGCGGCGGCGGCTCGCGCTCGGCCGCGGAGTCCTGGCAGCAGCGGGGACGCGGCGCGGGAGTCCGAGCTCTGGTGGCAGCTGAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS GCA 90 bp TCTGGCGGCGCTGGCGCTCGCAGCCTGCCAGGTCGTCCTTCTGGCTaGCGAACTTCCCGCGGCCGCGGCTCGGCGAGCGGCGCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: SGGAGARSLPGRPSG*RTSRGRGSASGAPR
Trigger: CCGCGGGGCGCCGCTCGCCGAGCCGCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCGCCAGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS CCA 90 bp CGGCTCTGGCGGCGCTGGCGCTCGCAGCCTGCCAGGTCGTCCTTCTaGCTGCCGAACTTCCCGCGGCCGCGGCTCGGCGAGCGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: RLWRRWRSQPARSSF*LPNFPRPRLGERRP
Trigger: GGGGCGCCGCTCGCCGAGCCGCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCGCCAGAGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS CCA 90 bp ACTCGGAGGCGGGGAGGGCGCAGGCAAACTCGGCTCTGGCGGCGCTaGCGCTCGCAGCCTGCCAGGTCGTCCTTCTGGCTGCCGAACTTC +
Preference number: 5 (lower is better)
Translates to: TRRRGGRRQTRLWRR*RSQPARSSFWLPNF
Trigger: GAAGTTCGGCAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCGCCAGAGCCGAGTTTGCCTGCGCCCTCCCCGCCTCCGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS CCA 90 bp GAACTCTGCACTCGGAGGCGGGGAGGGCGCAGGCAAACTCGGCTCTaGCGGCGCTGGCGCTCGCAGCCTGCCAGGTCGTCCTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ELCTRRRGGRRQTRL*RRWRSQPARSSFWL
Trigger: CAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCGCCAGAGCCGAGTTTGCCTGCGCCCTCCCCGCCTCCGAGTGCAGAGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS GCA 90 bp CCGGTGCTCTTCTCCCCACCCGGAGGCTCCTCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACATGTGGATGCCGCCGGGACAGTAGAG +
Preference number: 5 (lower is better)
Translates to: PVLFSPPGGSSAGPG*SGVRKHVDAAGTVE
Trigger: CTCTACTGTCCCGGCGGCATCCACATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGAGGAGCCTCCGGGTGGGGAGAAGAGCACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000061240.7
ENST00000504560.5
ENST00000507499.5
ENST00000509505.5
CDS GCA 90 bp CTCCTCGGCGGGACCGGGGTGCTCAGGTGTCCGGAAACATGTGGATaGCGCCGGGACAGTAGAGAGGGCAAGCACTGCCTGTTACCCCCA +
Preference number: 5 (lower is better)
Translates to: LLGGTGVLRCPETCG*RRDSREGKHCLLPP
Trigger: TGGGGGTAACAGGCAGTGCTTGCCCTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000061240.7
ENST00000504560.5
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTACCAGCCATAGGGAGACATTCGTAGTCTACGGGTGGGTTGGCTCAAAGGTCAGTCGCAGGGAGAAGTaGGCTAGGGGCCCACGGGTG +
Preference number: 5 (lower is better)
Translates to: ATSHRETFVVYGWVGSKVSRREK*ARGPRV
Trigger: CACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGACT...GACCTTTGAGCCAACCCACCCGTAGACTACGAATGTCTCCCTATGGCTGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCAGTCGCAGGGAGAAGTaGGCTAGGGGCCCACGGGTG +
Preference number: 5 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFSRREK*ARGPRV
Trigger: CACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGACT...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp CTGACCTCCCCTCATGAGAAGTCCAGGTGCTTCTTCTTGAACTTCAAGGGCTCGCGGGCAGCCCAGGCATaGCCCCAACACTGCTTAGAG +
Preference number: 5 (lower is better)
Translates to: LTSPHEKSRCFFLNFKGSRAAQA*PQHCLE
Trigger: CTCTAAGCAGTGTTGGGGCAATGCCTGGGCTGCCCG...CGAGCCCTTGAAGTTCAAGAAGAAGCACCTGGACTTCTCATGAGGGGAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS-3UTR CAA 90 bp GTGCTTCTTCTTGAACTTCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTTATCCTGTCTATAAGTaGGTAGAGGGCCCCTCGCTT +
Preference number: 5 (lower is better)
Translates to: VLLLELQGLGQPRHCPNTYPVYK*VEGPSL
Trigger: AAGCGAGGGGCCCTCTACCAACTTATAGACAGGATA...AGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGAAGTTCAAGAAGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS CCA 90 bp CTTCCAGATGAGGATGAGAGATTCTCTGGCTTTACTGGCAATCCCTaGATTCTCCTGGTGCTCCTGCTCAAAGGACTGAAAGGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: LPDEDERFSGFTGNP*ILLVLLLKGLKGQP
Trigger: GGGCTGACCTTTCAGTCCTTTGAGCAGGAGCACCAGGAGAATCCAGGGATTGCCAGTAAAGCCAGAGAATCTCTCATCCTCATCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507499.5
CDS-3UTR CAA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTAGGAGGGTACTCCTaGGGCCAGCCAGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPLGGYS*GQPGVV
Trigger: AACCACCCCTGGCTGGCCCAAGGAGTACCCTCCTAA...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATAGTCGCAGGGAGAAGTaGGCTAGGGGCCCACGGGTG +
Preference number: 5 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNSRREK*ARGPRV
Trigger: CACCCGTGGGCCCCTAGCCAACTTCTCCCTGCGACT...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATATTAGGAGGGTACTCCTaGGGCCAGCCAGGGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SRQSFRRILLTPLRSFLILGGYS*GQPGVV
Trigger: AACCACCCCTGGCTGGCCCAAGGAGTACCCTCCTAA...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GGACGTATGCCATTATCATCACGGGAGGGGAGAATGGTATCCAGAAACATCCCCTCACTAAAGGCTAATTaGATTCGGTGGCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GRMPLSSREGRMVSRNIPSLKAN*IRWPGV
Trigger: CACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGA...GGGGATGTTTCTGGATACCATTCTCCCCTCCCGTGATGATAATGGCATACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp GGGACTGGTGATGAGGCCACTTGGACTGTGGATCTTCTGTTCACACTCAGCTTCAGCAGCAGCAGTAACTaGAGTAATGAACCATCCAGA +
Preference number: 5 (lower is better)
Translates to: GTGDEATWTVDLLFTLSFSSSSN*SNEPSR
Trigger: TCTGGATGGTTCATTACTCAAGTTACTGCTGCTGCT...GAAGCTGAGTGTGAACAGAAGATCCACAGTCCAAGTGGCCTCATCACCAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTCCTCCACGGTCAGGTTaGGCACACTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASPPRSG*AHSSSS
Trigger: AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGG...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp AGACATCGCTGCTCACAGCCTCCACGGTCAGGTTTGGCACACTCATCTTCCTCTCTTAACTGTGTTGTTTaGCTCCAAGCATCAAGTCAA +
Preference number: 5 (lower is better)
Translates to: RHRCSQPPRSGLAHSSSSLNCVV*LQASSQ
Trigger: TTGACTTGATGCTTGGAGCAAAACAACACAGTTAAG...AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGGCTGTGAGCAGCGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCCTCCACGGTCAGGTTaGGCACACTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSPPRSG*AHSSSS
Trigger: AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTTACTTGTCTGGCCAGTaGGGACTGGTGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVYLSGQ*GLVMRP
Trigger: TGGCCTCATCACCAGTCCCAACTGGCCAGACAAGTA...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TATCTCCTTTGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATGCCATTATCAAGCCCCACAGCTGTaGAATCAAGACCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: YLLCLDGFADQLQDVCHYQAPQL*NQDHQR
Trigger: TCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTTG...ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACAGGGTTCGCTGACCAATaGCAGGACGTATGCCATTAT +
Preference number: 5 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTGFADQ*QDVCHY
Trigger: ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCC...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCCTCCACGGTCAGGTTaGGCACACTCATCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSPPRSG*AHSSSS
Trigger: AGAGGAAGATGAGTGTGCCAAACCTGACCGTGGAGG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAAAATCCATTACGGCATaGACACATGTAGCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPKSITA*THVAPH
Trigger: ATGGGGAGCTACATGTGTCAATGCCGTAATGGATTT...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTACTTGTCTGGCCAGTaGGGACTGGTGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYYLSGQ*GLVMRP
Trigger: TGGCCTCATCACCAGTCCCAACTGGCCAGACAAGTA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCAGGGGATCTGGTATCTaGTTGCCACACAGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFRGSGI*LPHSRP
Trigger: TGGACGACTGTGTGGCAACAAGATACCAGATCCCCT...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCCAGAAACATCCCCCTaGAGAAGGTGTTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPPETSP*RRCSWH
Trigger: ATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTGG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTACCAGAAACATCCCCCTaGAGAAGGTGTTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TKACRVFLEVYDALSPALPETSP*RRCSWH
Trigger: ATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTGG...TAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTACCAGAAACATCCCCCTaGAGAAGGTGTTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLPETSP*RRCSWH
Trigger: ATGCCAGGAACACCTTCTCAAGGGGGATGTTTCTGG...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAAGGGTTCGCTGACCAATaGCAGGACGTATGCCATTAT +
Preference number: 5 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSEGFADQ*QDVCHY
Trigger: ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCC...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAATCTATACAGCTTTCTaGCCTGTGCGATATCTCCTT +
Preference number: 5 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPIYTAF*PVRYLL
Trigger: AAGGAGATATCGCACAGGCAAGAAAGCTGTATAGAT...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTGCAGCAAACCCTGCTTaGTTCACAGTTCCGTCAGAA +
Preference number: 5 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVAANPA*FTVPSE
Trigger: TTCTGACGGAACTGTGAACAAAGCAGGGTTTGCTGC...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCGCAGCAAACCCTGCTTaGTTCACAGTTCCGTCAGAA +
Preference number: 5 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFAANPA*FTVPSE
Trigger: TTCTGACGGAACTGTGAACAAAGCAGGGTTTGCTGC...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTCTCAGACACTGTTATTTTCCACACACATTCTTTCATCGGGCGATAGTCATCATGGTGCCGTTAAGTTaGGTAAGAAGTCCACCACAA +
Preference number: 5 (lower is better)
Translates to: ALRHCYFPHTFFHRAIVIMVPLS*VRSPPQ
Trigger: TTGTGGTGGACTTCTTACCAAACTTAACGGCACCAT...GATGACTATCGCCCGATGAAAGAATGTGTGTGGAAAATAACAGTGTCTGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAAAATTCTGTACTGGGTaGGTGCAACCACTTGCCACA +
Preference number: 5 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGKFCTG*VQPLAT
Trigger: TGTGGCAAGTGGTTGCACCAACCCAGTACAGAATTT...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCAGCGCCACAGAATTaGCCATGCAGTTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTSAPQN*PCSLDS
Trigger: TGAGTCTAAACTGCATGGCAAATTCTGTGGCGCTGA...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAATACTTGTCTGGCCAGTaGGGACTGGTGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: VYDALSPALLIPSSMEFKYLSGQ*GLVMRP
Trigger: TGGCCTCATCACCAGTCCCAACTGGCCAGACAAGTA...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCGGATCTGGTATCTTGTaGCCACACAGTCGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSGSGIL*PHSRPR
Trigger: TCTTGGACGACTGTGTGGCAACAAGATACCAGATCC...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCAGGGGATCTGGTATCTaGTTGCCACACAGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSRGSGI*LPHSRP
Trigger: TGGACGACTGTGTGGCAACAAGATACCAGATCCCCT...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACACAAGCCCCACAGCTGTaGAATCAAGACCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTQAPQL*NQDHQR
Trigger: TCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTTG...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCGGGTTCGCTGACCAATaGCAGGACGTATGCCATTAT +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSGFADQ*QDVCHY
Trigger: ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCC...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAGAGGAAAGGTTGCCATaGGATTCTTGTAGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIEERLP*DSCRVS
Trigger: AGAAACTCTACAAGAATCCAATGGCAACCTTTCCTC...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTAGGTTGGTGCAACCACTaGCCACACACAGTTCTTATT +
Preference number: 5 (lower is better)
Translates to: HTVVQESVTFLFLHQILLGWCNH*PHTVLI
Trigger: AATAAGAACTGTGTGTGGCAAGTGGTTGCACCAACC...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATAAATTCTGTACTGGGTaGGTGCAACCACTTGCCACA +
Preference number: 5 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNKFCTG*VQPLAT
Trigger: TGTGGCAAGTGGTTGCACCAACCCAGTACAGAATTT...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTATCAGCGCCACAGAATTaGCCATGCAGTTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: HTVVQESVTFLFLHQILLSAPQN*PCSLDS
Trigger: TGAGTCTAAACTGCATGGCAAATTCTGTGGCGCTGA...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp CACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGGCTTTGAAGCCCTTCTaGGATACAGTATTGTCAGAT +
Preference number: 5 (lower is better)
Translates to: HTSSEFSHKVHKTSQASWALKPF*DTVLSD
Trigger: ATCTGACAATACTGTATCCAAGAAGGGCTTCAAAGC...CCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACAAAATCCATTACGGCATaGACACATGTAGCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTKSITA*THVAPH
Trigger: ATGGGGAGCTACATGTGTCAATGCCGTAATGGATTT...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATCACACTCAGCTTCCTaGCAATCATGTTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPSHSAS*QSCLLS
Trigger: TGACAATAAACATGATTGCAAGGAAGCTGAGTGTGA...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCTGCATTCTTTCCTGCTaGGGTACTTGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSCILSC*GTCLAS
Trigger: ACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGCA...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCTGCATTCTTTCCTGCTaGGGTACTTGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: EVYDALSPALLIPSSMEFCILSC*GTCLAS
Trigger: ACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGCA...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTATCTTGTaGCCACACAGTCGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYGSGIL*PHSRPR
Trigger: TCTTGGACGACTGTGTGGCAACAAGATACCAGATCC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCAACAGATCTCTTGGTTTaGATTCTGCTTTCAATCGTC +
Preference number: 5 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPTDLLV*ILLSIV
Trigger: GACGATTGAAAGCAGAATCAAAACCAAGAGATCTGT...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TATCTCCTTTGCTTAGACGGGTTCGCTGACCAATTGCAGGACGTATGCCATTATCTTGTAGAGTCTTCCTaGAAGTATATGATGCCCTTT +
Preference number: 5 (lower is better)
Translates to: YLLCLDGFADQLQDVCHYLVESS*KYMMPF
Trigger: AAAGGGCATCATATACTTCAAGGAAGACTCTACAAG...ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCCGTCTAAGCAAAGGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATACATTTCTGGCATATTTaGGCTAACGGGAGATTAGTG +
Preference number: 5 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIHFWHI*ANGRLV
Trigger: CACTAATCTCCCGTTAGCCAAAATATGCCAGAAATG...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp CACCAGACACACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTCATCCACAAAGTATaGGAGGTAGATCTTATGTCT +
Preference number: 5 (lower is better)
Translates to: HQTHTYTWKVQITLRRLPFIHKV*EVDLMS
Trigger: AGACATAAGATCTACCTCCAATACTTTGTGGATGAA...TGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGTGTGTCTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAAGCAGCAAACCCTGCTTaGTTCACAGTTCCGTCAGAA +
Preference number: 5 (lower is better)
Translates to: VYDALSPALLIPSSMEFKAANPA*FTVPSE
Trigger: TTCTGACGGAACTGTGAACAAAGCAGGGTTTGCTGC...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCGGTTGGTGCAACCACTaGCCACACACAGTTCTTATT +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSGWCNH*PHTVLI
Trigger: AATAAGAACTGTGTGTGGCAAGTGGTTGCACCAACC...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCGGTTGGTGCAACCACTaGCCACACACAGTTCTTATT +
Preference number: 5 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPGWCNH*PHTVLI
Trigger: AATAAGAACTGTGTGTGGCAAGTGGTTGCACCAACC...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCAAATTCTGTACTGGGTaGGTGCAACCACTTGCCACA +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSKFCTG*VQPLAT
Trigger: TGTGGCAAGTGGTTGCACCAACCCAGTACAGAATTT...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTCAGCGCCACAGAATTaGCCATGCAGTTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYSAPQN*PCSLDS
Trigger: TGAGTCTAAACTGCATGGCAAATTCTGTGGCGCTGA...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCAAATCCATTACGGCATaGACACATGTAGCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSKSITA*THVAPH
Trigger: ATGGGGAGCTACATGTGTCAATGCCGTAATGGATTT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATATCACACTCAGCTTCCTaGCAATCATGTTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: SRQSFRRILLTPLRSFLISHSAS*QSCLLS
Trigger: TGACAATAAACATGATTGCAAGGAAGCTGAGTGTGA...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATCACTAAAGGCTAATTaGATTCGGTGGCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: TWKVQITLRRLPFHIHLISLKAN*IRWPGV
Trigger: CACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGA...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCTCACTAAAGGCTAATTaGATTCGGTGGCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSSLKAN*IRWPGV
Trigger: CACTCCTGGCCACCGAATCAAATTAGCCTTTAGTGA...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTCTTGTAGAGTCTTCCTaGAAGTATATGATGCCCTTT +
Preference number: 5 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASLVESS*KYMMPF
Trigger: AAAGGGCATCATATACTTCAAGGAAGACTCTACAAG...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTTTCCCTTAACTGTGTaGTTTTGCTCCAAGCATCAA +
Preference number: 5 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASFPLTV*FCSKHQ
Trigger: TTGATGCTTGGAGCAAAACAACACAGTTAAGGGAAA...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp ACAAAACGAGAACATGATGACAGTCCTCAAAGTGTAGCATGGAATTTAAAAAGATATCCTGTCTATAAGTaGGTAGAGGGCCCCTCGCTT +
Preference number: 5 (lower is better)
Translates to: TKREHDDSPQSVAWNLKRYPVYK*VEGPSL
Trigger: AAGCGAGGGGCCCTCTACCAACTTATAGACAGGATA...TCTTTTTAAATTCCATGCTACACTTTGAGGACTGTCATCATGTTCTCGTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCTTAACTGTGTTGTTTaGCTCCAAGCCAAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSLNCVV*LQAKAN
Trigger: ATTGGCTTTGGCTTGGAGCAAAACAACACAGTTAAG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000507499.5
CDS-3UTR CAA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATTTTCCCTTAACTGTGTaGTTTTGCTCCAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNFPLTV*FCSKPK
Trigger: CTTTGGCTTGGAGCAAAACAACACAGTTAAGGGAAA...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000507499.5
CDS-3UTR CAA 90 bp CACACAGTCGTCCAAGAATCGGTGACTTTTCTGTTTCTCCATCAAATACTTCTACAGAAAATTGTACTCTaGACCTGGCTGGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: HTVVQESVTFLFLHQILLQKIVL*TWLDVF
Trigger: GAAAACATCCAGCCAGGTCAAGAGTACAATTTTCTG...TAGAAGTATTTGATGGAGAAACAGAAAAGTCACCGATTCTTGGACGACTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509505.5
CDS-3UTR CAA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTAGGGTTCGCTGACCAATaGCAGGACGTATGCCATTAT +
Preference number: 5 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLGFADQ*QDVCHY
Trigger: ATAATGGCATACGTCCTGCAATTGGTCAGCGAACCC...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCATCTATACAGCTTTCTaGCCTGTGCGATATCTCCTT +
Preference number: 5 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSIYTAF*PVRYLL
Trigger: AAGGAGATATCGCACAGGCAAGAAAGCTGTATAGAT...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TCCAGACAGTCATTCAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATATTCATCCACAAAGTATaGGAGGTAGATCTTATGTCT +
Preference number: 5 (lower is better)
Translates to: SRQSFRRILLTPLRSFLIFIHKV*EVDLMS
Trigger: AGACATAAGATCTACCTCCAATACTTTGTGGATGAA...TATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTGAATGACTGTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCATGGTGCCGTTAAGTTaGGTAAGAAGTCCACCACAA +
Preference number: 5 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPMVPLS*VRSPPQ
Trigger: TTGTGGTGGACTTCTTACCAAACTTAACGGCACCAT...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCATGGTGCCGTTAAGTTaGGTAAGAAGTCCACCACAA +
Preference number: 5 (lower is better)
Translates to: EVYDALSPALLIPSSMEFMVPLS*VRSPPQ
Trigger: TTGTGGTGGACTTCTTACCAAACTTAACGGCACCAT...GAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TTCTCAGTTGTGCAGAGCATAGCTCACTATGGCCTAATAAGATGTCAATCAGAAGCTTTGAAGCCCTTCTaGGATACAGTATTGTCAGAT +
Preference number: 5 (lower is better)
Translates to: FSVVQSIAHYGLIRCQSEALKPF*DTVLSD
Trigger: ATCTGACAATACTGTATCCAAGAAGGGCTTCAAAGC...TTCTGATTGACATCTTATTAGGCCATAGTGAGCTATGCTCTGCACAACTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTGCTTTGAAGCCCTTCTaGGATACAGTATTGTCAGAT +
Preference number: 5 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVALKPF*DTVLSD
Trigger: ATCTGACAATACTGTATCCAAGAAGGGCTTCAAAGC...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CAGAAGAATCCTGCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACACTCAGCTTCCTaGCAATCATGTTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: QKNPAHTSSEFSHKVHKTSHSAS*QSCLLS
Trigger: TGACAATAAACATGATTGCAAGGAAGCTGAGTGTGA...TGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGCAGGATTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTTGCATTCTTTCCTGCTaGGGTACTTGTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPCILSC*GTCLAS
Trigger: ACTGGCCAGACAAGTACCCAAGCAGGAAAGAATGCA...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTGGATCTGGTATCTTGTaGCCACACAGTCGTCCAAGA +
Preference number: 5 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPGSGIL*PHSRPR
Trigger: TCTTGGACGACTGTGTGGCAACAAGATACCAGATCC...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTTGAAAGCCTTTTCTTaGAACAGATGCATCAGAAAC +
Preference number: 5 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASLKAFS*NRCIRN
Trigger: GTTTCTGATGCATCTGTTCAAAGAAAAGGCTTTCAA...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp AAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTAGCAGCAGCAGTAACTaGAGTAATGAACCATCCAGA +
Preference number: 5 (lower is better)
Translates to: KYKSPSEDSHFTFTLYGSSSSSN*SNEPSR
Trigger: TCTGGATGGTTCATTACTCAAGTTACTGCTGCTGCT...AGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GCTCACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTAAAGGCTCATCTACATaGCAGGCAATAGTTATACAT +
Preference number: 5 (lower is better)
Translates to: AHTSSEFSHKVHKTSQASKGSST*QAIVIH
Trigger: ATGTATAACTATTGCCTGCAATGTAGATGAGCCTTT...AGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp GTCTTCCTTGAAGTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCCTTAACTGTGTTGTTTaGCTCCAAGCCAAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: VFLEVYDALSPALLIPSSLNCVV*LQAKAN
Trigger: ATTGGCTTTGGCTTGGAGCAAAACAACACAGTTAAG...GCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATACTTCAAGGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000061240.7
ENST00000507499.5
CDS-3UTR CAA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCCAGAAAATTGTACTCTaGACCTGGCTGGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPQKIVL*TWLDVF
Trigger: GAAAACATCCAGCCAGGTCAAGAGTACAATTTTCTG...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATTTCAAGCTGTGAACAAAAGCTTGTAGAGTCTTCCTTGAAGTATATGATGCCCATCTATACAGCTTTCTaGCCTGTGCGATATCTCCTT +
Preference number: 5 (lower is better)
Translates to: ISSCEQKLVESSLKYMMPIYTAF*PVRYLL
Trigger: AAGGAGATATCGCACAGGCAAGAAAGCTGTATAGAT...GGGCATCATATACTTCAAGGAAGACTCTACAAGCTTTTGTTCACAGCTTGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGAGGAAAGGTTGCCATaGGATTCTTGTAGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: HGKYKSPSEDSHFTFTLYEERLP*DSCRVS
Trigger: AGAAACTCTACAAGAATCCAATGGCAACCTTTCCTC...ATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTAGAGGAAAGGTTGCCATaGGATTCTTGTAGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLEERLP*DSCRVS
Trigger: AGAAACTCTACAAGAATCCAATGGCAACCTTTCCTC...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTCAGCACAAACTACTCTaGTATAGATCCATCGTTGTA +
Preference number: 5 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVQHKLL*YRSIVV
Trigger: TACAACGATGGATCTATACAAGAGTAGTTTGTGCTG...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ATGTCCCTAAATCTTGACAAATTGTCAAAAAGAACACTGCAGGGTCACAGTTCCCAGCACAAACTACTCTaGTATAGATCCATCGTTGTA +
Preference number: 5 (lower is better)
Translates to: MSLNLDKLSKRTLQGHSSQHKLL*YRSIVV
Trigger: TACAACGATGGATCTATACAAGAGTAGTTTGTGCTG...GGAACTGTGACCCTGCAGTGTTCTTTTTGACAATTTGTCAAGATTTAGGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTCAAGCCCCACAGCTGTaGAATCAAGACCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPQAPQL*NQDHQR
Trigger: TCTTTGATGGTCTTGATTCAACAGCTGTGGGGCTTG...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACACCTCTTCGGAGTTTTCTCATAAGGTTCATAAGACATCACAGGCTTCTTGGAATTATGCACATTCCTTaGTGTTCTGACAGAGGTTTT +
Preference number: 5 (lower is better)
Translates to: TPLRSFLIRFIRHHRLLGIMHIP*CSDRGF
Trigger: AAAACCTCTGTCAGAACACAAAGGAATGTGCATAAT...TCCAAGAAGCCTGTGATGTCTTATGAACCTTATGAGAAAACTCCGAAGAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAAAGCAGCAGCAGTAACTaGAGTAATGAACCATCCAGA +
Preference number: 5 (lower is better)
Translates to: VYDALSPALLIPSSMEFKSSSSN*SNEPSR
Trigger: TCTGGATGGTTCATTACTCAAGTTACTGCTGCTGCT...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp GTCTCAAGATCATTTGTGTTTCAGAGGTTAAGCTGGCCTGCAAGTGGAAATAATCAAGCAGAGGCTCATTaGTATAAGATAAACTGGGTT +
Preference number: 5 (lower is better)
Translates to: VSRSFVFQRLSWPASGNNQAEAH*YKINWV
Trigger: AACCCAGTTTATCTTATACAAATGAGCCTCTGCTTG...ATTATTTCCACTTGCAGGCCAGCTTAACCTCTGAAACACAAATGATCTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp ACATATGGCCATGATTTCTTGGCTATGACACCAAAAGCACAGGCAATAAAACTATATGGCCATGATTTCTaGGCTATGACACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TYGHDFLAMTPKAQAIKLYGHDF*AMTPKA
Trigger: TGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATA...TAGTTTTATTGCCTGTGCTTTTGGTGTCATAGCCAAGAAATCATGGCCATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS TCA 90 bp TCAAACTTTATAATTTGTGTTCATCAGAAGACACAATCAACAGAGTaGAAATACAACCTTCTCCCCTGGGGTCACAGAAACTCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: SNFIICVHQKTQSTE*KYNLLPWGHRNSPD
Trigger: ATCTGGAGAGTTTCTGTGACCCCAGGGGAGAAGGTTGTATTTTCACTCTGTTGATTGTGTCTTCTGATGAACACAAATTATAAAGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp GTATATGATGCCCTTTCACCAGCTTTATTAATACCATCAAGCATGGAGTTCAAAGAGGAAAGGTTGCCATaGGATTCTTGTAGAGTTTCT +
Preference number: 5 (lower is better)
Translates to: VYDALSPALLIPSSMEFKEERLP*DSCRVS
Trigger: AGAAACTCTACAAGAATCCAATGGCAACCTTTCCTC...TTTGAACTCCATGCTTGATGGTATTAATAAAGCTGGTGAAAGGGCATCATATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACACATACACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCTTCATCCACAAAGTATaGGAGGTAGATCTTATGTCT +
Preference number: 5 (lower is better)
Translates to: THTHGKYKSPSEDSHFTFFIHKV*EVDLMS
Trigger: AGACATAAGATCTACCTCCAATACTTTGTGGATGAA...GAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGTGTATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTATTATGCACATTCCTTaGTGTTCTGACAGAGGTTTT +
Preference number: 5 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVIMHIP*CSDRGF
Trigger: AAAACCTCTGTCAGAACACAAAGGAATGTGCATAAT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATGGATCTGGTTATAGGAATGGGATATTaGAGGGTTTTGGAAACACAA +
Preference number: 5 (lower is better)
Translates to: TNHPQKTPISHSPYMDLVIGMGY*RVLETQ
Trigger: TTGTGTTTCCAAAACCCTCAAATATCCCATTCCTAT...AACCAGATCCATATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACTTAACTGTGTTGTTTaGCTCCAAGCCAAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLLNCVV*LQAKAN
Trigger: ATTGGCTTTGGCTTGGAGCAAAACAACACAGTTAAG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTATTTCCCTTAACTGTGTaGTTTTGCTCCAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLFPLTV*FCSKPK
Trigger: CTTTGGCTTGGAGCAAAACAACACAGTTAAGGGAAA...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTACAGAAAATTGTACTCTaGACCTGGCTGGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLQKIVL*TWLDVF
Trigger: GAAAACATCCAGCCAGGTCAAGAGTACAATTTTCTG...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp AAAACACAGGGTAAAAACTTCATGTCATTACATATGGCCATGATTTCTTGGCTAATCTATACAGCTTTCTaGCCTGTGCGATATCTCCTT +
Preference number: 5 (lower is better)
Translates to: KTQGKNFMSLHMAMISWLIYTAF*PVRYLL
Trigger: AAGGAGATATCGCACAGGCAAGAAAGCTGTATAGAT...TAGCCAAGAAATCATGGCCATATGTAATGACATGAAGTTTTTACCCTGTGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513213.5
CDS-3UTR CAA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATATTGAAAGCCTTTTCTTaGAACAGATGCATCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TWKVQITLRRLPFHIHLILKAFS*NRCIRN
Trigger: GTTTCTGATGCATCTGTTCAAAGAAAAGGCTTTCAA...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp ACATGGAAAGTACAAATCACCCTCAGAAGACTCCCATTTCACATTCACCTTATAAGAAGTTCCCATTATTaGTCCATGAAACCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: TWKVQITLRRLPFHIHLIRSSHY*SMKPKE
Trigger: TTCCTTAGGTTTCATGGACAAATAATGGGAACTTCT...TATAAGGTGAATGTGAAATGGGAGTCTTCTGAGGGTGATTTGTACTTTCCATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS-3UTR CAA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTACAGATCTCTTGGTTTaGATTCTGCTTTCAATCGTC +
Preference number: 5 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPTDLLV*ILLSIV
Trigger: GACGATTGAAAGCAGAATCAAAACCAAGAGATCTGT...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp CTTATATGGATCTGGTTTACACTGTATCCAAGATACAAAGTCAGCAATTATCCTCTTGTAGAGTCTTCCTaGAAGTATATGATGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LIWIWFTLYPRYKVSNYPLVESS*KYMMPF
Trigger: AAAGGGCATCATATACTTCAAGGAAGACTCTACAAG...AGGATAATTGCTGACTTTGTATCTTGGATACAGTGTAAACCAGATCCATATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS-3UTR CAA 90 bp TTGGCTAACGGGAGATTAGTGAGAAAATATGGAAGAAGTTACTGGAATAAATCATTTAGGAGGATCTGTTaGATCATGTGCAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: LANGRLVRKYGRSYWNKSFRRIC*IMCRNS
Trigger: AGAATTCCTGCACATGATCAAACAGATCCTCCTAAA...TGATTTATTCCAGTAACTTCTTCCATATTTTCTCACTAATCTCCCGTTAGCCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000061240.7
CDS TCA 72 bp CCAGGACTCCGCGGCCGAGCGCGAGCCGCCGCCGCCTaGGCCCAAAGCCGCCGCCGCAGCTCCGAGAAGATG +
Preference number: 6 (lower is better)
Translates to: PGLRGRARAAAA*AQSRRRSSEKM
Trigger: CATCTTCTCGGAGCTGCGGCGGCGGCTTTGGGCTCAGGCGGCGGCGGCTCGCGCTCGGCCGCGGAGTCCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS GCA 72 bp GCTGGCGCTCGCAGCCTGCCAGGTCGTCCTTCTGGCTaGCGAACTTCCCGCGGCCGCGGCTCGGCGAGCGGC +
Preference number: 6 (lower is better)
Translates to: AGARSLPGRPSG*RTSRGRGSASG
Trigger: GCCGCTCGCCGAGCCGCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS CCA 72 bp CGGCGCTGGCGCTCGCAGCCTGCCAGGTCGTCCTTCTaGCTGCCGAACTTCCCGCGGCCGCGGCTCGGCGAG +
Preference number: 6 (lower is better)
Translates to: RRWRSQPARSSF*LPNFPRPRLGE
Trigger: CTCGCCGAGCCGCGGCCGCGGGAAGTTCGGCAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS CCA 72 bp CGGGGAGGGCGCAGGCAAACTCGGCTCTGGCGGCGCTaGCGCTCGCAGCCTGCCAGGTCGTCCTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RGGRRQTRLWRR*RSQPARSSFWL
Trigger: CAGCCAGAAGGACGACCTGGCAGGCTGCGAGCGCCAGCGCCGCCAGAGCCGAGTTTGCCTGCGCCCTCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000061240.7
ENST00000507499.5
ENST00000509505.5
CDS TCA 72 bp GACGGGACCCAGAGGTTAGGCAGCCGCGGTCCGCGCTaGTGTGCGGGGCTAGGGGCACCGGTGCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: DGTQRLGSRGPR*CAGLGAPVLFS
Trigger: GGAGAAGAGCACCGGTGCCCCTAGCCCCGCACATCAGCGCGGACCGCGGCTGCCTAACCTCTGGGTCCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000061240.7
ENST00000504560.5
ENST00000507499.5
ENST00000509505.5
ENST00000513213.5
CDS GCA 72 bp TTCTCCCCACCCGGAGGCTCCTCGGCGGGACCGGGGTaGTCAGGTGTCCGGAAACATGTGGATGCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: FSPPGGSSAGPG*SGVRKHVDAAG
Trigger: CCCGGCGGCATCCACATGTTTCCGGACACCTGAGCACCCCGGTCCCGCCGAGGAGCCTCCGGGTGGGGAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000061240.7
ENST00000504560.5
ENST00000507499.5
ENST00000509505.5
ENST00000513213.5
CDS GCA 72 bp GGGACCGGGGTGCTCAGGTGTCCGGAAACATGTGGATaGCGCCGGGACAGTAGAGAGGGCAAGCACTGCCTG +
Preference number: 6 (lower is better)
Translates to: GTGVLRCPETCG*RRDSREGKHCL
Trigger: CAGGCAGTGCTTGCCCTCTCTACTGTCCCGGCGGCATCCACATGTTTCCGGACACCTGAGCACCCCGGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000061240.7
ENST00000504560.5
ENST00000507499.5
ENST00000509505.5
CDS GCA 72 bp TCAAGGGCTCGGGCAGCCCAGGCATTGCCCCAACACTaGTTAGAGCAGTGGTCAGTCGGCTTTACACGGGTC +
Preference number: 6 (lower is better)
Translates to: SRARAAQALPQH*LEQWSVGFTRV
Trigger: GACCCGTGTAAAGCCGACTGACCACTGCTCTAAGCAGTGTTGGGGCAATGCCTGGGCTGCCCGAGCCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504560.5
CDS CCA 72 bp GAGGATGAGAGATTCTCTGGCTTTACTGGCAATCCCTaGATTCTCCTGGTGCTCCTGCTCAAAGGACTGAAA +
Preference number: 6 (lower is better)
Translates to: EDERFSGFTGNP*ILLVLLLKGLK
Trigger: TTTCAGTCCTTTGAGCAGGAGCACCAGGAGAATCCAGGGATTGCCAGTAAAGCCAGAGAATCTCTCATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507499.5
CDS TCA 72 bp ATAATTTGTGTTCATCAGAAGACACAATCAACAGAGTaGAAATACAACCTTCTCCCCTGGGGTCACAGAAAC +
Preference number: 6 (lower is better)
Translates to: IICVHQKTQSTE*KYNLLPWGHRN
Trigger: GTTTCTGTGACCCCAGGGGAGAAGGTTGTATTTTCACTCTGTTGATTGTGTCTTCTGATGAACACAAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513213.5