RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000065717

Ensembl transcript IDs: ENST00000262953.11, ENST00000426948.6, ENST00000443826.7, ENST00000455444.6, ENST00000586422.5, ENST00000586492.1, ENST00000587137.5, ENST00000587217.5, ENST00000587672.5, ENST00000587770.5, ENST00000587893.1, ENST00000589205.5, ENST00000589291.1, ENST00000589364.5, ENST00000590101.5, ENST00000590183.5, ENST00000590536.5, ENST00000591529.5, ENST00000591720.1, ENST00000592305.5, ENST00000592584.1

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGG +
Preference number: 1 (lower is better)
Translates to: RFLGRAGRRLLGCLS*LLIPLGVWTSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR CCA 90 bp CCGTTGGCCAGAGAGCAGATGGGATGTACGGTTCCTAGGCAGGGCTaGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCT +
Preference number: 1 (lower is better)
Translates to: PLAREQMGCTVPRQG*EAAARMSVLAADSP
Trigger: AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCTGCTCTCTGGCCAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR TCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGTCTGTCCTGGCTGCTaGTTCCCCTGGGAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWVCPGC*FPWESG
Trigger: TCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGAC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR TCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGTCTGTCCTGGCTGCTaGTTCCCCTGGGAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: AAARMSVLAADSPGSLDFVCPGC*FPWESG
Trigger: TCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGAC...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 2 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR CCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 2 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 2 (lower is better)
Translates to: VPRQGWEAAARMSVLAADIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: AAARMSVLAADSPGSLDFLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR CCA 72 bp GGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGT +
Preference number: 3 (lower is better)
Translates to: GRAGRRLLGCLS*LLIPLGVWTSG
Trigger: ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
3UTR CCA 72 bp AGAGAGCAGATGGGATGTACGGTTCCTAGGCAGGGCTaGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: REQMGCTVPRQG*EAAARMSVLAA
Trigger: AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCTGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCACAGCCGCCGCCAGCTaGGCCTGGGCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVTAAAS*AWAARA
Trigger: AGCCCTGGCTGCCCAGGCTCAGCTGGCGGCGGCTGT...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGGGCGTGCCGCGGGATaGCCGCGCCTACCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLGRAAG*PRLPVH
Trigger: ATGCACTGGTAGGCGCGGGCATCCCGCGGCACGCCC...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWASVCS*RACRGM
Trigger: CATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCCATGGGCCAGCGTGTaGAGCTGCCGGGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWPWASV*SCRACR
Trigger: GCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGG...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTCCATGGGCCAGCGTGTaGAGCTGCCGGGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPPWASV*SCRACR
Trigger: GCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGG...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGGTGACTGGCCGAGCTaGGCCCGGGGGTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLGDWPS*ARGWKR
Trigger: ACGCTTCCACCCCCGGGCCCAGCTCGGCCAGTCACC...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGCTGGCAGAGGTGACTaGCCGAGCTGGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLAGRGD*PSWARG
Trigger: CCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGGGCCACGGGCGTCTTaGCCCCAGGCTGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLGPRAS*PQAGPR
Trigger: ACGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTCCGCACGGTCCTCCTTaGCAGCCGCCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAPHGPP*QPPPAE
Trigger: CTCAGCTGGCGGCGGCTGTCAAGGAGGACCGTGCGG...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGCAAGCTGGCAGAGGTaGCTGGCCGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVASWQR*LAELGP
Trigger: CGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGCAAGCTGGCAGAGGTaGCTGGCCGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWASWQR*LAELGP
Trigger: CGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGGCGTGCCGCGGGATaGCCGCGCCTACCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAGRAAG*PRLPVH
Trigger: ATGCACTGGTAGGCGCGGGCATCCCGCGGCACGCCC...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATCCATGGGCCAGCGTGTaGAGCTGCCGGGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADPWASV*SCRACR
Trigger: GCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGG...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGACAGGGGGTGCGTGGTaGGACAGCGGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLTGGAW*DSGWSC
Trigger: GCAGCTCCAGCCGCTGTCCCACCACGCACCCCCTGT...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGGGGTGGAAGCGTCCTaGGGCGGGGAGGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLGVEAS*GGEESQ
Trigger: CTGTGACTCCTCCCCGCCCCAGGACGCTTCCACCCC...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGTGACTGGCCGAGCTaGGCCCGGGGGTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWGDWPS*ARGWKR
Trigger: ACGCTTCCACCCCCGGGCCCAGCTCGGCCAGTCACC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGGCTGGCAGAGGTGACTaGCCGAGCTGGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWAGRGD*PSWARG
Trigger: CCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGC...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGCCACGGGCGTCTTaGCCCCAGGCTGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLGPRAS*PQAGPR
Trigger: ACGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGACAGCCGCCGCCAGCTaGGCCTGGGCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGTAAAS*AWAARA
Trigger: AGCCCTGGCTGCCCAGGCTCAGCTGGCGGCGGCTGT...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGGCAAGCTGGCAGAGGTaGCTGGCCGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWASWQR*LAELGP
Trigger: CGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGC...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCAAGCTGGCAGAGGTaGCTGGCCGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLASWQR*LAELGP
Trigger: CGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGCCCGCGCCTACCAGTaGATCCGAGGGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLARAYQ*IRGEGN
Trigger: GTTCCCTTCCCCTCGGATGCACTGGTAGGCGCGGGC...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGGGCGTGCCGCGGGATaGCCGCGCCTACCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDGRAAG*PRLPVH
Trigger: ATGCACTGGTAGGCGCGGGCATCCCGCGGCACGCCC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGGGCGTGCCGCGGGATaGCCGCGCCTACCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADGRAAG*PRLPVH
Trigger: ATGCACTGGTAGGCGCGGGCATCCCGCGGCACGCCC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIASVCS*RACRGM
Trigger: CATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGC...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGCCATGGGCCAGCGTGTaGAGCTGCCGGGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGPWASV*SCRACR
Trigger: GCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGG...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGTCCACCGAGGTCCCCTaGCCATCGGCCCCCACATGC +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLSTEVP*PSAPTC
Trigger: GCATGTGGGGGCCGATGGGCAGGGGACCTCGGTGGA...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTCCACCGAGGTCCCCTaGCCATCGGCCCCCACATGC +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVSTEVP*PSAPTC
Trigger: GCATGTGGGGGCCGATGGGCAGGGGACCTCGGTGGA...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCAAGGGCTGGCCGGACTaGAGCGGGGTCGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVKGWPD*SGVGCL
Trigger: AAGGCACCCGACCCCGCTCCAGTCCGGCCAGCCCTT...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR CCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGGGGTGGAAGCGTCCTaGGGCGGGGAGGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVGVEAS*GGEESQ
Trigger: CTGTGACTCCTCCCCGCCCCAGGACGCTTCCACCCC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGGTGACTGGCCGAGCTaGGCCCGGGGGTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDGDWPS*ARGWKR
Trigger: ACGCTTCCACCCCCGGGCCCAGCTCGGCCAGTCACC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGCTGGCAGAGGTGACTaGCCGAGCTGGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSAGRGD*PSWARG
Trigger: CCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGGCTGGCAGAGGTGACTaGCCGAGCTGGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLAGRGD*PSWARG
Trigger: CCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGC...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGGGGCCACGGGCGTCTTaGCCCCAGGCTGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLGPRAS*PQAGPR
Trigger: ACGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCC...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGGGCCACGGGCGTCTTaGCCCCAGGCTGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVGPRAS*PQAGPR
Trigger: ACGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTCCGCACGGTCCTCCTTaGCAGCCGCCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTPHGPP*QPPPAE
Trigger: CTCAGCTGGCGGCGGCTGTCAAGGAGGACCGTGCGG...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCCGCACGGTCCTCCTTaGCAGCCGCCGCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVPHGPP*QPPPAE
Trigger: CTCAGCTGGCGGCGGCTGTCAAGGAGGACCGTGCGG...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGCAAGCTGGCAGAGGTaGCTGGCCGAGCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFASWQR*LAELGP
Trigger: CGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGC...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGCAGCAGGGGAAGGTGTaGAGCCGTTGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLQQGKV*SRWPES
Trigger: GCTCTCTGGCCAACGGCTTCACACCTTCCCCTGCTG...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGCTGCTGCTGCCCGATaGGGCTGTTCAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPAAAAR*GCSAPP
Trigger: TGGGGGAGCTGAACAGCCTCATCGGGCAGCAGCAGC...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWSPTVT*LARSTA
Trigger: GGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGA...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGAGGGGCACAGGGGGTaGGTGGTGGGACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSEGHRG*VVGQRL
Trigger: CAGCCGCTGTCCCACCACGCACCCCCTGTGCCCCTC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGGAACCGGCTGCATCTaGCCGTCCGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLGTGCI*PSADTW
Trigger: CCACGTGTCTGCGGACGGGCAGATGCAGCCGGTTCC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGCCCGCGCCTACCAGTaGATCCGAGGGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWARAYQ*IRGEGN
Trigger: GTTCCCTTCCCCTCGGATGCACTGGTAGGCGCGGGC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGASVCS*RACRGM
Trigger: CATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGASVCS*RACRGM
Trigger: CATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGC...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGTCCACCGAGGTCCCCTaGCCATCGGCCCCCACATGC +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLSTEVP*PSAPTC
Trigger: GCATGTGGGGGCCGATGGGCAGGGGACCTCGGTGGA...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGACAGCGGCTGGAGCTaGTGCTGCCCGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAADSGWS*CCPMRL
Trigger: CAGCCTCATCGGGCAGCAGCAGCTCCAGCCGCTGTC...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTGGGACAGCGGCTaGAGCTGCTGCCCGATGAGG +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVWWDSG*SCCPMR
Trigger: CCTCATCGGGCAGCAGCTCCAGCCGCTGTCCCACCA...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR CCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGACAGGGGGTGCGTGGTaGGACAGCGGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLTGGAW*DSGWSC
Trigger: GCAGCTCCAGCCGCTGTCCCACCACGCACCCCCTGT...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGCTCTCTCCACTCTaGACCCCTCGGCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLGLSPL*TPRPPR
Trigger: GCGTGGAGGCCGAGGGGTCCAGAGTGGAGAGAGCCC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGGGGTGGAAGCGTCCTaGGGCGGGGAGGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADGVEAS*GGEESQ
Trigger: CTGTGACTCCTCCCCGCCCCAGGACGCTTCCACCCC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGGTGACTGGCCGAGCTaGGCCCGGGGGTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGGDWPS*ARGWKR
Trigger: ACGCTTCCACCCCCGGGCCCAGCTCGGCCAGTCACC...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGTGACTGGCCGAGCTaGGCCCGGGGGTGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFGDWPS*ARGWKR
Trigger: ACGCTTCCACCCCCGGGCCCAGCTCGGCCAGTCACC...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGGGCGACGCTGTCCGTaGAAGGTGCTGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLGRRCP*KVLAWQ
Trigger: CTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGGCGACGCTGTCCGTaGAAGGTGCTGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWGRRCP*KVLAWQ
Trigger: CTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTTTCAGGCAGTCGAGCTaGGCCACGGGCGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAFRQSS*ATGVLA
Trigger: GGCCAAGACGCCCGTGGCCCAGCTCGACTGCCTGAA...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTTTCAGGCAGTCGAGCTaGGCCACGGGCGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPFRQSS*ATGVLA
Trigger: GGCCAAGACGCCCGTGGCCCAGCTCGACTGCCTGAA...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGACCGCCAGCCAGTCCTaGTTAGGGCAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLTASQS*LGQWPR
Trigger: CCTGGGCCACTGCCCTAACCAGGACTGGCTGGCGGT...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGAAGGGCTGGCCGGACTaGAGCGGGGTCGTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGKGWPD*SGVVGA
Trigger: CGCTCCCACGACCCCGCTCCAGTCCGGCCAGCCCTT...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443826.7
CDS-3UTR TCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAACAGCCGCCGCCAGCTaGGCCTGGGCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTTAAAS*AWAARA
Trigger: AGCCCTGGCTGCCCAGGCTCAGCTGGCGGCGGCTGT...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGGCTCTAGGCAGCGGTaGGCCAAGGCTAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVGSRQR*AKARGQ
Trigger: TTGGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCCGGAGAGGTCTCCGTTaGGAGTGCTGTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVRRGLR*ECCGSP
Trigger: TGGGCTCCCACAGCACTCTCAACGGAGACCTCTCCG...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGTAGCAGGCTGGGGCTaGGGAAGTCAGCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPVAGWG*GSQLGL
Trigger: AAGGCCGAGCTGACTTCCTCAGCCCCAGCCTGCTAC...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGTAGCAGGCTGGGGCTaGGGAAGTCAGCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVVAGWG*GSQLGL
Trigger: AAGGCCGAGCTGACTTCCTCAGCCCCAGCCTGCTAC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCAGCAGGGGAAGGTGTaGAGCCGTTGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLQQGKV*SRWPES
Trigger: GCTCTCTGGCCAACGGCTTCACACCTTCCCCTGCTG...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTCAGCAGGGGAAGGTGTaGAGCCGTTGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPQQGKV*SRWPES
Trigger: GCTCTCTGGCCAACGGCTTCACACCTTCCCCTGCTG...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGCTGCTGCTGCCCGATaGGGCTGTTCAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADAAAAR*GCSAPP
Trigger: TGGGGGAGCTGAACAGCCTCATCGGGCAGCAGCAGC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDSPTVT*LARSTA
Trigger: GGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGA...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGAGCGGCTGGAGCTGCTaGCCGATGAGGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWSGWSC*PMRLFS
Trigger: GCTGAACAGCCTCATCGGGCAGCAGCTCCAGCCGCT...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR GCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAGAGGGGCACAGGGGGTaGGTGGTGGGACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGEGHRG*VVGQRL
Trigger: CAGCCGCTGTCCCACCACGCACCCCCTGTGCCCCTC...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGGAGGGGCACAGGGGGTaGGTGGTGGGACAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYREGHRG*VVGQRL
Trigger: CAGCCGCTGTCCCACCACGCACCCCCTGTGCCCCTC...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGGAACCGGCTGCATCTaGCCGTCCGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDGTGCI*PSADTW
Trigger: CCACGTGTCTGCGGACGGGCAGATGCAGCCGGTTCC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGGGAAGGGAACCGGCTaGATCTGCCCGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLGKGTG*ICPSAD
Trigger: GTCTGCGGACGGGCAGATGCAGCCGGTTCCCTTCCC...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGCCCGCGCCTACCAGTaGATCCGAGGGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADARAYQ*IRGEGN
Trigger: GTTCCCTTCCCCTCGGATGCACTGGTAGGCGCGGGC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCCCGCGCCTACCAGTaGATCCGAGGGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLARAYQ*IRGEGN
Trigger: GTTCCCTTCCCCTCGGATGCACTGGTAGGCGCGGGC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGGGCGTGCCGCGGGATaGCCGCGCCTACCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGGRAAG*PRLPVH
Trigger: ATGCACTGGTAGGCGCGGGCATCCCGCGGCACGCCC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATG +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKASVCS*RACRGM
Trigger: CATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGC...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGCCATGGGCCAGCGTGTaGAGCTGCCGGGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKPWASV*SCRACR
Trigger: GCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGG...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGTCCACCGAGGTCCCCTaGCCATCGGCCCCCACATGC +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSSTEVP*PSAPTC
Trigger: GCATGTGGGGGCCGATGGGCAGGGGACCTCGGTGGA...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGCTGGAGCTGCTGCTaGCCGATGAGGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAGWSCC*PMRLFS
Trigger: GCTGAACAGCCTCATCGGGCAGCAGCAGCTCCAGCC...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGGGCTCTCTCCACTCTaGACCCCTCGGCCTCCACGC +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVGLSPL*TPRPPR
Trigger: GCGTGGAGGCCGAGGGGTCCAGAGTGGAGAGAGCCC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGGGGTGGAAGCGTCCTaGGGCGGGGAGGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVGVEAS*GGEESQ
Trigger: CTGTGACTCCTCCCCGCCCCAGGACGCTTCCACCCC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGGGGTGGAAGCGTCCTaGGGCGGGGAGGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGGVEAS*GGEESQ
Trigger: CTGTGACTCCTCCCCGCCCCAGGACGCTTCCACCCC...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGCTGGCAGAGGTGACTaGCCGAGCTGGGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTAGRGD*PSWARG
Trigger: CCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGTCCGTGGAAGGTGCTaGCTTGGCAGCAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLVRGRC*LGSKLA
Trigger: TGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGAC...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGCGACGCTGTCCGTaGAAGGTGCTGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLGRRCP*KVLAWQ
Trigger: CTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWTELLT*GDRWRL
Trigger: CAGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGGCCACGGGCGTCTTaGCCCCAGGCTGGCCCACGT +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTGPRAS*PQAGPR
Trigger: ACGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGTTCAGGCAGTCGAGCTaGGCCACGGGCGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLFRQSS*ATGVLA
Trigger: GGCCAAGACGCCCGTGGCCCAGCTCGACTGCCTGAA...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGTTCCTAGGCAGGGCTaGGAGGCGGCTGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLVPRQG*EAAARM
Trigger: CATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGTTCCTAGGCAGGGCTaGGAGGCGGCTGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPVPRQG*EAAARM
Trigger: CATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGAGCACCTGCTGCTaGTGCTCCTGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVWSTCC*CSWVRK
Trigger: CTTCCTGACCCAGGAGCATCAGCAGCAGGTGCTCCA...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTTGGAGCACCTGCTGCTaGTGCTCCTGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAWSTCC*CSWVRK
Trigger: CTTCCTGACCCAGGAGCATCAGCAGCAGGTGCTCCA...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGAGCTGCTGCCCGATaGGGCTGTTCAGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFGAAAR*GCSAPP
Trigger: TGGGGGAGCTGAACAGCCTCATCGGGCAGCAGCTCC...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR TCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCGGAGAGGTCTCCGTTaGGAGTGCTGTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLRRGLR*ECCGSP
Trigger: TGGGCTCCCACAGCACTCTCAACGGAGACCTCTCCG...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGTAGCAGGCTGGGGCTaGGGAAGTCAGCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADVAGWG*GSQLGL
Trigger: AAGGCCGAGCTGACTTCCTCAGCCCCAGCCTGCTAC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGTCTGTCCTGGCTGCTaGTTCCCCTGGGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVVCPGC*FPWESG
Trigger: TCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGAC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCAGCAGGGGAAGGTGTaGAGCCGTTGGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWQQGKV*SRWPES
Trigger: GCTCTCTGGCCAACGGCTTCACACCTTCCCCTGCTG...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGGAGCGGGGTCGGGTaGCTTCCCTGGGGGTACATC +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGWSGVG*LPWGYI
Trigger: GATGTACCCCCAGGGAAGGCACCCGACCCCGCTCCA...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR GCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGSPTVT*LARSTA
Trigger: GGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGA...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTCCCGACGGGCAGGAATaGAGATGGGTACCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAPDGQE*RWVPFR
Trigger: GCGGAAAGGTACCCATCTGCATTCCTGCCCGTCGGG...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGGAACCGGCTGCATCTaGCCGTCCGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVGTGCI*PSADTW
Trigger: CCACGTGTCTGCGGACGGGCAGATGCAGCCGGTTCC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGAAGGGAACCGGCTaGATCTGCCCGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSGKGTG*ICPSAD
Trigger: GTCTGCGGACGGGCAGATGCAGCCGGTTCCCTTCCC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGGGAAGGGAACCGGCTaGATCTGCCCGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVGKGTG*ICPSAD
Trigger: GTCTGCGGACGGGCAGATGCAGCCGGTTCCCTTCCC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGCCCGCGCCTACCAGTaGATCCGAGGGGAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVARAYQ*IRGEGN
Trigger: GTTCCCTTCCCCTCGGATGCACTGGTAGGCGCGGGC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGTTGTCCTTCCCGGTaGTCACAAACCACCGTCCGC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWGCPSR*SQTTVR
Trigger: GCGGACGGTGGTTTGTGAGCACCGGGAAGGACAACC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCCATCGGCCCCCACATaGAGCAGGGGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWPSAPT*SRGRCE
Trigger: TTCACACCTTCCCCTGCTGCATGTGGGGGCCGATGG...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTCCATCGGCCCCCACATaGAGCAGGGGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPPSAPT*SRGRCE
Trigger: TTCACACCTTCCCCTGCTGCATGTGGGGGCCGATGG...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGAGAACTTGAAGGGCTaGCCGGACTGGAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDENLKG*PDWSGV
Trigger: GACCCCGCTCCAGTCCGGCCAGCCCTTCAAGTTCTC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAACAGGGGGTGCGTGGTaGGACAGCGGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGTGGAW*DSGWSC
Trigger: GCAGCTCCAGCCGCTGTCCCACCACGCACCCCCTGT...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGGCAGGAATGCAGATaGGTACCTTTCCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAGQECR*VPFRRG
Trigger: CCCCCTGCGGAAAGGTACCCATCTGCATTCCTGCCC...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGGGCAGGAATGCAGATaGGTACCTTTCCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLGQECR*VPFRRG
Trigger: CCCCCTGCGGAAAGGTACCCATCTGCATTCCTGCCC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATAGAGGCCAAGGAGGCTaGACTGTCCACCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADRGQGG*TVHQVP
Trigger: CGGGACCTGGTGGACAGTCCAGCCTCCTTGGCCTCT...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGAGAGGCCAAGGAGGCTaGACTGTCCACCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLRGQGG*TVHQVP
Trigger: CGGGACCTGGTGGACAGTCCAGCCTCCTTGGCCTCT...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGGTCCGTGGAAGGTGCTaGCTTGGCAGCAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLVRGRC*LGSKLA
Trigger: TGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGAC...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGTCCGTGGAAGGTGCTaGCTTGGCAGCAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPVRGRC*LGSKLA
Trigger: TGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGAC...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCTTCAGGCAGTCGAGCTaGGCCACGGGCGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVFRQSS*ATGVLA
Trigger: GGCCAAGACGCCCGTGGCCCAGCTCGACTGCCTGAA...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCTTCAGGCAGTCGAGCTaGGCCACGGGCGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFFRQSS*ATGVLA
Trigger: GGCCAAGACGCCCGTGGCCCAGCTCGACTGCCTGAA...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCCGTCCGTGTGGCCCTaGAACTGCCTGACCATAGTC +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLPSVWP*NCLTIV
Trigger: GACTATGGTCAGGCAGTTCCAGGGCCACACGGACGG...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGACCGCCAGCCAGTCCTaGTTAGGGCAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLTASQS*LGQWPR
Trigger: CCTGGGCCACTGCCCTAACCAGGACTGGCTGGCGGT...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCACCGCCAGCCAGTCCTaGTTAGGGCAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVTASQS*LGQWPR
Trigger: CCTGGGCCACTGCCCTAACCAGGACTGGCTGGCGGT...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTTCCTAGGCAGGGCTaGGAGGCGGCTGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLVPRQG*EAAARM
Trigger: CATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGAAGGGCTGGCCGGACTaGAGCGGGGTCTGTAATCCT +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLKGWPD*SGVCNP
Trigger: AGGATTACAGACCCCGCTCCAGTCCGGCCAGCCCTT...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCTGGTGGGACAGCGGCTaGAGCTGCTGCTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVWWDSG*SCCCPM
Trigger: CATCGGGCAGCAGCAGCTCCAGCCGCTGTCCCACCA...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGTGGTGGGACAGCGGCTaGAGCTGCTGCTGCCCGATG +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSWWDSG*SCCCPM
Trigger: CATCGGGCAGCAGCAGCTCCAGCCGCTGTCCCACCA...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTCCAAGATCGAGAACTTaGAGGGCTGGCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPPRSRT*RAGRTG
Trigger: TCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGG...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCCCAAGATCGAGAACTTaGAGGGCTGGCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVPRSRT*RAGRTG
Trigger: TCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGG...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGTGGAGCACCTGCTGCTaGTGCTCCTGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLWSTCC*CSWVRK
Trigger: CTTCCTGACCCAGGAGCATCAGCAGCAGGTGCTCCA...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGTGGAGCACCTGCTGCTaGTGCTCCTGGGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLWSTCC*CSWVRK
Trigger: CTTCCTGACCCAGGAGCATCAGCAGCAGGTGCTCCA...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGGCTCTAGGCAGCGGTaGGCCAAGGCTAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGGSRQR*AKARGQ
Trigger: TTGGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCC...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGGGCTCTAGGCAGCGGTaGGCCAAGGCTAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLGSRQR*AKARGQ
Trigger: TTGGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCC...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGGCTCTAGGCAGCGGTaGGCCAAGGCTAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIGSRQR*AKARGQ
Trigger: TTGGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCC...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGCGGAGAGGTCTCCGTTaGGAGTGCTGTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSRRGLR*ECCGSP
Trigger: TGGGCTCCCACAGCACTCTCAACGGAGACCTCTCCG...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGCCTCGGAGATGGGGATaGGACTCAAATGCCATCACG +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLPRRWG*DSNAIT
Trigger: CGTGATGGCATTTGAGTCTCATCCCCATCTCCGAGG...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGGGAGGAAGAGACGGATaGCCCTCGGAGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWGGRDG*PSEMGM
Trigger: CATCCCCATCTCCGAGGGTCATCCGTCTCTTCCTCC...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGTAGCAGGCTGGGGCTaGGGAAGTCAGCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSVAGWG*GSQLGL
Trigger: AAGGCCGAGCTGACTTCCTCAGCCCCAGCCTGCTAC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGATCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGSPTVT*LARSTA
Trigger: GGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGA...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCC +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRSPTVT*LARSTA
Trigger: GGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGA...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGAGGGAGATGCACTCCTaGTCGGGGCTCTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLREMHS*SGLSPL
Trigger: GAGTGGAGAGAGCCCCGAGCAGGAGTGCATCTCCCT...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGTGGCTCCTTCTCATCTaGTCTCTGCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLWLLLI*SLLPAT
Trigger: GGTGGCGGGAAGCAGAGAGCAGATGAGAAGGAGCCA...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGCTGTCCGTGGAAGGTaGTGGCTTGGCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDAVRGR*WLGSKL
Trigger: CAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGGGATGAGACTCAAATaGCATCACGGGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVGMRLK*HHGGAS
Trigger: GGACGCTCCCCCGTGATGGCATTTGAGTCTCATCCC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAGGAACCGGCTGCATCTaGCCGTCCGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGGTGCI*PSADTW
Trigger: CCACGTGTCTGCGGACGGGCAGATGCAGCCGGTTCC...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGGGGAAGGGAACCGGCTaGATCTGCCCGTCCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRGKGTG*ICPSAD
Trigger: GTCTGCGGACGGGCAGATGCAGCCGGTTCCCTTCCC...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGTCCGGCTTGCGGACGTaGAGGATCTCCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLSGLRT*RISTLL
Trigger: TAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGA...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTCCGGCTTGCGGACGTaGAGGATCTCCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVSGLRT*RISTLL
Trigger: TAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGA...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGGGTATTTCTCCGGCTTaGGGACGTGCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLGISPA*GRAGSP
Trigger: TGGAGATCCTGCACGTCCGCAAGCCGGAGAAATACC...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGGGGCAGGAATGCAGATaGGTACCTTTCCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWGQECR*VPFRRG
Trigger: CCCCCTGCGGAAAGGTACCCATCTGCATTCCTGCCC...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGAGAGGCCAAGGAGGCTaGACTGTCCACCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLRGQGG*TVHQVP
Trigger: CGGGACCTGGTGGACAGTCCAGCCTCCTTGGCCTCT...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCAGAGGCCAAGGAGGCTaGACTGTCCACCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFRGQGG*TVHQVP
Trigger: CGGGACCTGGTGGACAGTCCAGCCTCCTTGGCCTCT...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGTCCGTGGAAGGTGCTaGCTTGGCAGCAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDVRGRC*LGSKLA
Trigger: TGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGAC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAGGGCGACGCTGTCCGTaGAAGGTGCTGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGGRRCP*KVLAWQ
Trigger: CTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCC...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTTELLT*GDRWRL
Trigger: CAGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLITELLT*GDRWRL
Trigger: CAGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATCCGTCCGTGTGGCCCTaGAACTGCCTGACCATAGTC +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADPSVWP*NCLTIV
Trigger: GACTATGGTCAGGCAGTTCCAGGGCCACACGGACGG...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCCGTCCGTGTGGCCCTaGAACTGCCTGACCATAGTC +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLPSVWP*NCLTIV
Trigger: GACTATGGTCAGGCAGTTCCAGGGCCACACGGACGG...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACCGCCAGCCAGTCCTaGTTAGGGCAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGTASQS*LGQWPR
Trigger: CCTGGGCCACTGCCCTAACCAGGACTGGCTGGCGGT...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGGACTGGAAAATGCTaGCCCCGTACGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADWTGKC*PRTASS
Trigger: GGAGGACGCCGTACGGGGCCAGCATTTTCCAGTCCA...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR TCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCCAAGATCGAGAACTTaGAGGGCTGGCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLPRSRT*RAGRTG
Trigger: TCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGG...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGCGGAGAGGTCTCCGTTaGGAGTGCTGTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRRRGLR*ECCGSP
Trigger: TGGGCTCCCACAGCACTCTCAACGGAGACCTCTCCG...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTCGGAGAGGTCTCCGTTaGGAGTGCTGTGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGRRGLR*ECCGSP
Trigger: TGGGCTCCCACAGCACTCTCAACGGAGACCTCTCCG...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTCCTCGGAGATGGGGATaGGACTCAAATGCCATCACG +
Preference number: 4 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAPRRWG*DSNAIT
Trigger: CGTGATGGCATTTGAGTCTCATCCCCATCTCCGAGG...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGGAGGAAGAGACGGATaGCCCTCGGAGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIGGRDG*PSEMGM
Trigger: CATCCCCATCTCCGAGGGTCATCCGTCTCTTCCTCC...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGGAGGAAGAGACGGATaGCCCTCGGAGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGGGRDG*PSEMGM
Trigger: CATCCCCATCTCCGAGGGTCATCCGTCTCTTCCTCC...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGAGGAAGAGACGGATaGCCCTCGGAGATGGGGATG +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSGGRDG*PSEMGM
Trigger: CATCCCCATCTCCGAGGGTCATCCGTCTCTTCCTCC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGTAGCAGGCTGGGGCTaGGGAAGTCAGCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGVAGWG*GSQLGL
Trigger: AAGGCCGAGCTGACTTCCTCAGCCCCAGCCTGCTAC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTGTCTGTCCTGGCTGCTaGTTCCCCTGGGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTVCPGC*FPWESG
Trigger: TCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGAC...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGGTCTGTCCTGGCTGCTaGTTCCCCTGGGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLVCPGC*FPWESG
Trigger: TCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGAC...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGAGGGAGATGCACTCCTaGTCGGGGCTCTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLREMHS*SGLSPL
Trigger: GAGTGGAGAGAGCCCCGAGCAGGAGTGCATCTCCCT...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTCCCGACGGGCAGGAATaGAGATGGGTACCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTPDGQE*RWVPFR
Trigger: GCGGAAAGGTACCCATCTGCATTCCTGCCCGTCGGG...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGCCCGACGGGCAGGAATaGAGATGGGTACCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLPDGQE*RWVPFR
Trigger: GCGGAAAGGTACCCATCTGCATTCCTGCCCGTCGGG...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTTGGAGGCAGGAGTaGTGGCGGGAAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: RFLGRAGRRLLGCLSWLLIWRQE*WREGHS
Trigger: TGAATGACCTTCCCGCCAGCACTCCTGCCTCCAAAT...CAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAACCGGCTGCATCTaGCCGTCCGCAGACACGTGG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTGTGCI*PSADTW
Trigger: CCACGTGTCTGCGGACGGGCAGATGCAGCCGGTTCC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCGCAGGATCTCCACGTTaGTACTCTCCATTCCGACCG +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVAGSPR*YSPFRP
Trigger: CGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGC...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGCAGGATCTCCACGTTaGTACTCTCCATTCCGACCG +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPAGSPR*YSPFRP
Trigger: CGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGC...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGGTATTTCTCCGGCTTaGGGACGTGCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWGISPA*GRAGSP
Trigger: TGGAGATCCTGCACGTCCGCAAGCCGGAGAAATACC...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGGGTTGTCCTTCCCGGTaGTCACAAACCACCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLGCPSR*SQTTVR
Trigger: GCGGACGGTGGTTTGTGAGCACCGGGAAGGACAACC...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTTGTCCTTCCCGGTaGTCACAAACCACCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSGCPSR*SQTTVR
Trigger: GCGGACGGTGGTTTGTGAGCACCGGGAAGGACAACC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGCCTTGGACTGGAAAATaGTGGCCCCGTACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLPWTGK*WPRTAS
Trigger: GGACGCCGTACGGGGCCAGCATTTTCCAGTCCAAGG...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGCCATCGGCCCCCACATaGAGCAGGGGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSPSAPT*SRGRCE
Trigger: TTCACACCTTCCCCTGCTGCATGTGGGGGCCGATGG...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTCCATCGGCCCCCACATaGAGCAGGGGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTPSAPT*SRGRCE
Trigger: TTCACACCTTCCCCTGCTGCATGTGGGGGCCGATGG...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGGCTGGAGCTGCTGCTaGCCGATGAGGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGGWSCC*PMRLFS
Trigger: GCTGAACAGCCTCATCGGGCAGCAGCAGCTCCAGCC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGACAGCGGCTGGAGCTaGTGCTGCCCGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTDSGWS*CCPMRL
Trigger: CAGCCTCATCGGGCAGCAGCAGCTCCAGCCGCTGTC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGGTCGGGTGCCTTCCCTaGGGGTACATCCTGCCGATC +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRVGCLP*GYILPI
Trigger: GATCGGCAGGATGTACCCCCAGGGAAGGCACCCGAC...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR CCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGAGAACTTGAAGGGCTaGCCGGACTGGAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGENLKG*PDWSGV
Trigger: GACCCCGCTCCAGTCCGGCCAGCCCTTCAAGTTCTC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGGGCAGGAATGCAGATaGGTACCTTTCCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGGQECR*VPFRRG
Trigger: CCCCCTGCGGAAAGGTACCCATCTGCATTCCTGCCC...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGGAAGGTGCTGGCTTaGCAGCAAGCTGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADWKVLA*QQAGRG
Trigger: ACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCA...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGTGGAAGGTGCTGGCTTaGCAGCAAGCTGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLWKVLA*QQAGRG
Trigger: ACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCA...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGGTCCGTGGAAGGTGCTaGCTTGGCAGCAAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLVRGRC*LGSKLA
Trigger: TGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGAC...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGGGGCGACGCTGTCCGTaGAAGGTGCTGGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKGRRCP*KVLAWQ
Trigger: CTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCC...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRTELLT*GDRWRL
Trigger: CAGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGAAATGGACAAGGTGCTaGCCTCACCGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLKWTRC*PHRPRS
Trigger: TGATCGTGGGCGGTGAGGCCAGCACCTTGTCCATTT...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCCCGTCCGTGTGGCCCTaGAACTGCCTGACCATAGTC +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFPSVWP*NCLTIV
Trigger: GACTATGGTCAGGCAGTTCCAGGGCCACACGGACGG...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGAAATATCAATGCAGCTaGCGCCGTCCGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLKYQCS*RRPCGP
Trigger: AGGGCCACACGGACGGCGCCAGCTGCATTGATATTT...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCAAATATCAATGCAGCTaGCGCCGTCCGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVKYQCS*RRPCGP
Trigger: AGGGCCACACGGACGGCGCCAGCTGCATTGATATTT...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTCCTGGTTAGGGCAGTaGCCCAGGGAGAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWSWLGQ*PREKIW
Trigger: CCAGATTTTCTCCCTGGGCCACTGCCCTAACCAGGA...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAACCGCCAGCCAGTCCTaGTTAGGGCAGTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTTASQS*LGQWPR
Trigger: CCTGGGCCACTGCCCTAACCAGGACTGGCTGGCGGT...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTTGGACTGGAAAATGCTaGCCCCGTACGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIWTGKC*PRTASS
Trigger: GGAGGACGCCGTACGGGGCCAGCATTTTCCAGTCCA...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCTGAGGACGACTCCTTaGACTGGAAAATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWLRTTP*TGKCWP
Trigger: GGGCCAGCATTTTCCAGTCCAAGGAGTCGTCCTCAG...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTGGCCAGAGAGCAGATaGGATGTACGGTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWWPESR*DVRFLG
Trigger: GCCTAGGAACCGTACATCCCATCTGCTCTCTGGCCA...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTAAGGGCTGGCCGGACTaGAGCGGGGTCTGTAATCCT +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTKGWPD*SGVCNP
Trigger: AGGATTACAGACCCCGCTCCAGTCCGGCCAGCCCTT...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGCCAAGATCGAGAACTTaGAGGGCTGGCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGPRSRT*RAGRTG
Trigger: TCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGG...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPRKGII*AQIPLR
Trigger: TCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCT...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGCTCTAGGCAGCGGTaGGCCAAGGCTAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTGSRQR*AKARGQ
Trigger: TTGGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTCACAACTCAGGACTaGGGACGACTCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLVTTQD*GRLLGL
Trigger: CAGTCCAAGGAGTCGTCCTCAGTCCTGAGTTGTGAC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR TCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGTCACAACTCAGGACTaGGGACGACTCCTTGGACGC +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGVTTQD*GRLLGR
Trigger: GCGTCCAAGGAGTCGTCCTCAGTCCTGAGTTGTGAC...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCTGGCTCCTTCTCATCTaGTCTCTGCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFWLLLI*SLLPAT
Trigger: GGTGGCGGGAAGCAGAGAGCAGATGAGAAGGAGCCA...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGATTTGGAGGCAGGAGTaGTGGCGGGAAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWIWRQE*WREGHS
Trigger: TGAATGACCTTCCCGCCAGCACTCCTGCCTCCAAAT...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGATTTGGAGGCAGGAGTaGTGGCGGGAAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLIWRQE*WREGHS
Trigger: TGAATGACCTTCCCGCCAGCACTCCTGCCTCCAAAT...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGGCTGTCCGTGGAAGGTaGTGGCTTGGCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRAVRGR*WLGSKL
Trigger: CAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGC...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGCTGTCCGTGGAAGGTaGTGGCTTGGCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGAVRGR*WLGSKL
Trigger: CAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGGATGAGACTCAAATaGCATCACGGGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSGMRLK*HHGGAS
Trigger: GGACGCTCCCCCGTGATGGCATTTGAGTCTCATCCC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGGGATGAGACTCAAATaGCATCACGGGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIGMRLK*HHGGAS
Trigger: GGACGCTCCCCCGTGATGGCATTTGAGTCTCATCCC...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTGGGATGAGACTCAAATaGCATCACGGGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTGMRLK*HHGGAS
Trigger: GGACGCTCCCCCGTGATGGCATTTGAGTCTCATCCC...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGCAGGATCTCCACGTTaGTACTCTCCATTCCGACCG +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADAGSPR*YSPFRP
Trigger: CGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCAGGATCTCCACGTTaGTACTCTCCATTCCGACCG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLAGSPR*YSPFRP
Trigger: CGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCAGGATCTCCACGTTaGTACTCTCCATTCCGACCG +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLAGSPR*YSPFRP
Trigger: CGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGC...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTCCGGCTTGCGGACGTaGAGGATCTCCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGSGLRT*RISTLL
Trigger: TAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGA...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCGGCTTGCGGACGTaGAGGATCTCCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLSGLRT*RISTLL
Trigger: TAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGA...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGACCTTGGACTGGAAAATaGTGGCCCCGTACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGPWTGK*WPRTAS
Trigger: GGACGCCGTACGGGGCCAGCATTTTCCAGTCCAAGG...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGGGGCAGGAATGCAGATaGGTACCTTTCCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRGQECR*VPFRRG
Trigger: CCCCCTGCGGAAAGGTACCCATCTGCATTCCTGCCC...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCTGGAAGGTGCTGGCTTaGCAGCAAGCTGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFWKVLA*QQAGRG
Trigger: ACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCA...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGACAGAGCTGCTGACCTaGGGGGACAGGTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKTELLT*GDRWRL
Trigger: CAGCCTCCACCTGTCCCCCCAGGTCAGCAGCTCTGT...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATAAATGGACAAGGTGCTaGCCTCACCGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADKWTRC*PHRPRS
Trigger: TGATCGTGGGCGGTGAGGCCAGCACCTTGTCCATTT...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACAAATGGACAAGGTGCTaGCCTCACCGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDKWTRC*PHRPRS
Trigger: TGATCGTGGGCGGTGAGGCCAGCACCTTGTCCATTT...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGACCGTCCGTGTGGCCCTaGAACTGCCTGACCATAGTC +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGPSVWP*NCLTIV
Trigger: GACTATGGTCAGGCAGTTCCAGGGCCACACGGACGG...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGAAATATCAATGCAGCTaGCGCCGTCCGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLKYQCS*RRPCGP
Trigger: AGGGCCACACGGACGGCGCCAGCTGCATTGATATTT...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTCCCAGGGAGAAAATCTaGGAGCTGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPPREKI*ELKSCC
Trigger: GCAGCATGACTTCAGCTCCCAGATTTTCTCCCTGGG...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGTCCTGGTTAGGGCAGTaGCCCAGGGAGAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWSWLGQ*PREKIW
Trigger: CCAGATTTTCTCCCTGGGCCACTGCCCTAACCAGGA...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATGACGACTCCTTGGACTaGAAAATGCTGGCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADDDSLD*KMLAPY
Trigger: GTACGGGGCCAGCATTTTCCAGTCCAAGGAGTCGTC...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGACGACTCCTTGGACTaGAAAATGCTGGCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDDDSLD*KMLAPY
Trigger: GTACGGGGCCAGCATTTTCCAGTCCAAGGAGTCGTC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCTGAGGACGACTCCTTaGACTGGAAAATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLLRTTP*TGKCWP
Trigger: GGGCCAGCATTTTCCAGTCCAAGGAGTCGTCCTCAG...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGTTCCTAGGCAGGGCTaGGAGGCGGCTGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTVPRQG*EAAARM
Trigger: CATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTGGCCAGAGAGCAGATaGGATGTACGGTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADWPESR*DVRFLG
Trigger: GCCTAGGAACCGTACATCCCATCTGCTCTCTGGCCA...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGAAGCAGGAGAATCTTaGGAGGCGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLEAGES*EAEVAV
Trigger: CACTGCAACCTCCGCCTCCCAAGATTCTCCTGCTTC...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGACCAAGATCGAGAACTTaGAGGGCTGGCCGGACTGGA +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGPRSRT*RAGRTG
Trigger: TCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGG...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLRKGII*AQIPLR
Trigger: TCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCT...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGCTTTCATAAGGTCCTaGTGGCTCCTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: RQGWEAAARMSVLAADSPAFIRS*WLLLIC
Trigger: GCAGATGAGAAGGAGCCATCAGGACCTTATGAAAGC...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCCCTCGGAGATGGGGATaGGACTCAAATGCCATCACG +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFPRRWG*DSNAIT
Trigger: CGTGATGGCATTTGAGTCTCATCCCCATCTCCGAGG...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCCTCGGAGATGGGGATaGGACTCAAATGCCATCACG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVPRRWG*DSNAIT
Trigger: CGTGATGGCATTTGAGTCTCATCCCCATCTCCGAGG...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTGTCACAACTCAGGACTaGGGACGACTCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTVTTQD*GRLLGL
Trigger: CAGTCCAAGGAGTCGTCCTCAGTCCTGAGTTGTGAC...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR TCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCGTCACAACTCAGGACTaGGGACGACTCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVVTTQD*GRLLGL
Trigger: CAGTCCAAGGAGTCGTCCTCAGTCCTGAGTTGTGAC...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR TCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGTCTGTCCTGGCTGCTaGTTCCCCTGGGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTVCPGC*FPWESG
Trigger: TCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGAC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGTCACAACTCAGGACTaGGGACGACTCCTTGGACGC +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGVTTQD*GRLLGR
Trigger: GCGTCCAAGGAGTCGTCCTCAGTCCTGAGTTGTGAC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTTGGCTCCTTCTCATCTaGTCTCTGCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGWLLLI*SLLPAT
Trigger: GGTGGCGGGAAGCAGAGAGCAGATGAGAAGGAGCCA...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGTGGCTCCTTCTCATCTaGTCTCTGCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRWLLLI*SLLPAT
Trigger: GGTGGCGGGAAGCAGAGAGCAGATGAGAAGGAGCCA...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGCCCGACGGGCAGGAATaGAGATGGGTACCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKPDGQE*RWVPFR
Trigger: GCGGAAAGGTACCCATCTGCATTCCTGCCCGTCGGG...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGCTGTCCGTGGAAGGTaGTGGCTTGGCAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTAVRGR*WLGSKL
Trigger: CAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGC...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGGGATGAGACTCAAATaGCATCACGGGGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGGMRLK*HHGGAS
Trigger: GGACGCTCCCCCGTGATGGCATTTGAGTCTCATCCC...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGTATTTCTCCGGCTTaGGGACGTGCAGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFGISPA*GRAGSP
Trigger: TGGAGATCCTGCACGTCCGCAAGCCGGAGAAATACC...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGCCTTGGACTGGAAAATaGTGGCCCCGTACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKPWTGK*WPRTAS
Trigger: GGACGCCGTACGGGGCCAGCATTTTCCAGTCCAAGG...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR GCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGCCATCGGCCCCCACATaGAGCAGGGGAAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKPSAPT*SRGRCE
Trigger: TTCACACCTTCCCCTGCTGCATGTGGGGGCCGATGG...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGTGGAAGGTGCTGGCTTaGCAGCAAGCTGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRWKVLA*QQAGRG
Trigger: ACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCA...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGATGGAAGGTGCTGGCTTaGCAGCAAGCTGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGWKVLA*QQAGRG
Trigger: ACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCA...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCAAATGGACAAGGTGCTaGCCTCACCGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVKWTRC*PHRPRS
Trigger: TGATCGTGGGCGGTGAGGCCAGCACCTTGTCCATTT...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTAAATATCAATGCAGCTaGCGCCGTCCGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIKYQCS*RRPCGP
Trigger: AGGGCCACACGGACGGCGCCAGCTGCATTGATATTT...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGTTAGGGCAGTaGCCCAGGGAGAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLSWLGQ*PREKIW
Trigger: CCAGATTTTCTCCCTGGGCCACTGCCCTAACCAGGA...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCTCCTGGTTAGGGCAGTaGCCCAGGGAGAAAATCTGG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVSWLGQ*PREKIW
Trigger: CCAGATTTTCTCCCTGGGCCACTGCCCTAACCAGGA...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACATGGACTGGAAAATGCTaGCCCCGTACGGCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTWTGKC*PRTASS
Trigger: GGAGGACGCCGTACGGGGCCAGCATTTTCCAGTCCA...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGACGACTCCTTGGACTaGAAAATGCTGGCCCCGTAC +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSDDSLD*KMLAPY
Trigger: GTACGGGGCCAGCATTTTCCAGTCCAAGGAGTCGTC...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGAGGACGACTCCTTaGACTGGAAAATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVLRTTP*TGKCWP
Trigger: GGGCCAGCATTTTCCAGTCCAAGGAGTCGTCCTCAG...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGCTAGGATGTCTGTCCTaGCTGCTGATTCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSLGCLS*LLIPLG
Trigger: TCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCTGGCCAGAGAGCAGATaGGATGTACGGTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFWPESR*DVRFLG
Trigger: GCCTAGGAACCGTACATCCCATCTGCTCTCTGGCCA...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCTGGCCAGAGAGCAGATaGGATGTACGGTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVWPESR*DVRFLG
Trigger: GCCTAGGAACCGTACATCCCATCTGCTCTCTGGCCA...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTGAAGCAGGAGAATCTTaGGAGGCGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTEAGES*EAEVAV
Trigger: CACTGCAACCTCCGCCTCCCAAGATTCTCCTGCTTC...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTGGAATTCTTCTTTaGTGCGGTCGCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWTGILL*CGRRSP
Trigger: TGGAGATCTGCGACCGCATCAAAGAAGAATTCCAGT...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVRKGII*AQIPLR
Trigger: TCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCT...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLRKGII*AQIPLR
Trigger: TCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCT...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACGCTTTCATAAGGTCCTaGTGGCTCCTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDAFIRS*WLLLIC
Trigger: GCAGATGAGAAGGAGCCATCAGGACCTTATGAAAGC...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTCCTCGGAGATGGGGATaGGACTCAAATGCCATCACG +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGPRRWG*DSNAIT
Trigger: CGTGATGGCATTTGAGTCTCATCCCCATCTCCGAGG...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGATCTCCGCCTGCTTATaGATTTCAATGTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWISACL*ISMLSP
Trigger: CGGGCTCAACATTGAAATGCATAAGCAGGCGGAGAT...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGATCTCCGCCTGCTTATaGATTTCAATGTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLISACL*ISMLSP
Trigger: CGGGCTCAACATTGAAATGCATAAGCAGGCGGAGAT...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACATGGCTCCTTCTCATCTaGTCTCTGCTTCCCGCCACC +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTWLLLI*SLLPAT
Trigger: GGTGGCGGGAAGCAGAGAGCAGATGAGAAGGAGCCA...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGATTTGGAGGCAGGAGTaGTGGCGGGAAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLIWRQE*WREGHS
Trigger: TGAATGACCTTCCCGCCAGCACTCCTGCCTCCAAAT...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGATTTGGAGGCAGGAGTaGTGGCGGGAAGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGIWRQE*WREGHS
Trigger: TGAATGACCTTCCCGCCAGCACTCCTGCCTCCAAAT...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGAATCGGAAATATCAATaGAGCTGGCGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLNRKYQ*SWRRPC
Trigger: ACACGGACGGCGCCAGCTGCATTGATATTTCCGATT...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGTCCGGCTTGCGGACGTaGAGGATCTCCACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKSGLRT*RISTLL
Trigger: TAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGA...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTCAGAGCTTGATGATATaGAGGCGGCAAGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGQSLMI*RRQEWG
Trigger: CCCCCACTCTTGCCGCCTCCATATCATCAAGCTCTG...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR CCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTAAATATCAATGCAGCTaGCGCCGTCCGTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGKYQCS*RRPCGP
Trigger: AGGGCCACACGGACGGCGCCAGCTGCATTGATATTT...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGCCCAGGGAGAAAATCTaGGAGCTGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGPREKI*ELKSCC
Trigger: GCAGCATGACTTCAGCTCCCAGATTTTCTCCCTGGG...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGCCCAGGGAGAAAATCTaGGAGCTGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLPREKI*ELKSCC
Trigger: GCAGCATGACTTCAGCTCCCAGATTTTCTCCCTGGG...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGACTGGAATTCTTCTTTaGTGCGGTCGCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWTGILL*CGRRSP
Trigger: TGGAGATCTGCGACCGCATCAAAGAAGAATTCCAGT...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRRKGII*AQIPLR
Trigger: TCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCT...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGCTTTCATAAGGTCCTaGTGGCTCCTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: AAARMSVLAADSPGSLDFAFIRS*WLLLIC
Trigger: GCAGATGAGAAGGAGCCATCAGGACCTTATGAAAGC...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGAATCGGAAATATCAATaGAGCTGGCGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RWDVRFLGRAGRRLLGCLNRKYQ*SWRRPC
Trigger: ACACGGACGGCGCCAGCTGCATTGATATTTCCGATT...CAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTAATCGGAAATATCAATaGAGCTGGCGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTNRKYQ*SWRRPC
Trigger: ACACGGACGGCGCCAGCTGCATTGATATTTCCGATT...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCTGTCCAGAGCCGAGTaGCGTAATCGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: WEAAARMSVLAADSPGSLLSRAE*RNRKYQ
Trigger: TTGATATTTCCGATTACGGCACTCGGCTCTGGACAG...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGCTGTCCAGAGCCGAGTaGCGTAATCGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLLSRAE*RNRKYQ
Trigger: TTGATATTTCCGATTACGGCACTCGGCTCTGGACAG...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGAAATGGACAAGGTGCTaGCCTCACCGCCCACGATCA +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKKWTRC*PHRPRS
Trigger: TGATCGTGGGCGGTGAGGCCAGCACCTTGTCCATTT...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTCCCAGGGAGAAAATCTaGGAGCTGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGPREKI*ELKSCC
Trigger: GCAGCATGACTTCAGCTCCCAGATTTTCTCCCTGGG...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGCCCAGGGAGAAAATCTaGGAGCTGAAGTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRPREKI*ELKSCC
Trigger: GCAGCATGACTTCAGCTCCCAGATTTTCTCCCTGGG...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAATTCCCCTGGGAGTCTaGACTTCGGGTACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTIPLGV*TSGTGR
Trigger: CCTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAAT...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGTGGCCAGAGAGCAGATaGGATGTACGGTTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKWPESR*DVRFLG
Trigger: GCCTAGGAACCGTACATCCCATCTGCTCTCTGGCCA...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTACTGGAATTCTTCTTTaGTGCGGTCGCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTTGILL*CGRRSP
Trigger: TGGAGATCTGCGACCGCATCAAAGAAGAATTCCAGT...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGACTGGAATTCTTCTTTaGTGCGGTCGCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSTGILL*CGRRSP
Trigger: TGGAGATCTGCGACCGCATCAAAGAAGAATTCCAGT...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCACTGGAATTCTTCTTTaGTGCGGTCGCAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVTGILL*CGRRSP
Trigger: TGGAGATCTGCGACCGCATCAAAGAAGAATTCCAGT...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGATCTCCGCCTGCTTATaGATTTCAATGTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSISACL*ISMLSP
Trigger: CGGGCTCAACATTGAAATGCATAAGCAGGCGGAGAT...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAATCGGAAATATCAATaGAGCTGGCGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRNRKYQ*SWRRPC
Trigger: ACACGGACGGCGCCAGCTGCATTGATATTTCCGATT...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGCTGTCCAGAGCCGAGTaGCGTAATCGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSLSRAE*RNRKYQ
Trigger: TTGATATTTCCGATTACGGCACTCGGCTCTGGACAG...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTCTGTCCAGAGCCGAGTaGCGTAATCGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTLSRAE*RNRKYQ
Trigger: TTGATATTTCCGATTACGGCACTCGGCTCTGGACAG...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGTCCAGAGCCGAGTaGCGTAATCGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVLSRAE*RNRKYQ
Trigger: TTGATATTTCCGATTACGGCACTCGGCTCTGGACAG...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR TCA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGGCTTTCATAAGGTCCTaGTGGCTCCTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKAFIRS*WLLLIC
Trigger: GCAGATGAGAAGGAGCCATCAGGACCTTATGAAAGC...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGATCTCCGCCTGCTTATaGATTTCAATGTTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRISACL*ISMLSP
Trigger: CGGGCTCAACATTGAAATGCATAAGCAGGCGGAGAT...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp CTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAAATCGGAAATATCAATaGAGCTGGCGCCGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LGCLSWLLIPLGVWTSGTNRKYQ*SWRRPC
Trigger: ACACGGACGGCGCCAGCTGCATTGATATTTCCGATT...TGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTTCACAATCTCCGCCTaGTTATGCATTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: VPRQGWEAAARMSVLAADFTISA*LCISML
Trigger: CAACATTGAAATGCATAAGCAGGCGGAGATTGTGAA...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCACAATCTCCGCCTaGTTATGCATTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: EAAARMSVLAADSPGSLDFTISA*LCISML
Trigger: CAACATTGAAATGCATAAGCAGGCGGAGATTGTGAA...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCACACTCTTGAGCCCTTaGAGAAGTTCTAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVTLLSP*RSSNSQ
Trigger: CTGAGAATTAGAACTTCTGCAAGGGCTCAAGAGTGT...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591529.5
CDS-3UTR GCA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCTTCACAATCTCCGCCTaGTTATGCATTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVFTISA*LCISML
Trigger: CAACATTGAAATGCATAAGCAGGCGGAGATTGTGAA...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp AGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTTCACAATCTCCGCCTaGTTATGCATTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: RRLLGCLSWLLIPLGVWTFTISA*LCISML
Trigger: CAACATTGAAATGCATAAGCAGGCGGAGATTGTGAA...AGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR GCA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTTCACAATCTCCGCCTaGTTATGCATTTCAATGTTG +
Preference number: 4 (lower is better)
Translates to: AARMSVLAADSPGSLDFGFTISA*LCISML
Trigger: CAACATTGAAATGCATAAGCAGGCGGAGATTGTGAA...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS GCA 90 bp ATGGTGACCGCGCAGACCACCTCGCCATGGGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATGCCCGCGCCTACCAGTGCATCCGAG +
Preference number: 5 (lower is better)
Translates to: MVTAQTTSPWASVCS*RACRGMPAPTSASE
Trigger: CTCGGATGCACTGGTAGGCGCGGGCATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGGCGAGGTGGTCTGCGCGGTCACCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000586492.1
ENST00000589364.5
ENST00000590536.5
ENST00000591529.5
CDS CCA 90 bp TCAGGGGGCTCCTCAGGGCGACGCTGTCCGTGGAAGGTGCTGGCTTaGCAGCAAGCTGGCAGAGGTGACTGGCCGAGCTGGGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SGGSSGRRCPWKVLA*QQAGRGDWPSWARG
Trigger: CCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCCTGAGGAGCCCCCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000587672.5
ENST00000589205.5
ENST00000590536.5
ENST00000591529.5
CDS-3UTR CAA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGTGGGCCACGGGCGTCTaGGCCCCAGGCTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLWATGV*APGWPT
Trigger: CGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCCA...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGGCCACGGGCGTCTaGGCCCCAGGCTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVWATGV*APGWPT
Trigger: CGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCCA...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS CCA 90 bp CAGAGTCAGGGGGCTCCTCAGGGCGACGCTGTCCGTGGAAGGTGCTaGCTTGGCAGCAAGCTGGCAGAGGTGACTGGCCGAGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: QSQGAPQGDAVRGRC*LGSKLAEVTGRAGP
Trigger: GGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCCTGAGGAGCCCCCTGACTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000587672.5
ENST00000589205.5
ENST00000590536.5
ENST00000591529.5
CDS-3UTR CAA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCTGGGCCACGGGCGTCTaGGCCCCAGGCTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: AAARMSVLAADSPGSLDFWATGV*APGWPT
Trigger: CGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCCA...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGTGGGCCACGGGCGTCTaGGCCCCAGGCTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSWATGV*APGWPT
Trigger: CGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCCA...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp TTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTTGGGCCACGGGCGTCTaGGCCCCAGGCTGGCCCACG +
Preference number: 5 (lower is better)
Translates to: FLGRAGRRLLGCLSWLLIWATGV*APGWPT
Trigger: CGTGGGCCAGCCTGGGGCCAAGACGCCCGTGGCCCA...AATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS CCA 90 bp GGTGACGCCCGCAGGTGCACAGAGGGAACTCAGGCTAGCATGGCATaGGCCGAGGTGGGATTCAGAGCCCCACCAGGCTGCGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GDARRCTEGTQASMA*AEVGFRAPPGCVLS
Trigger: GCTGAGCACGCAGCCTGGTGGGGCTCTGAATCCCACCTCGGCCCATGCCATGCTAGCCTGAGTTCCCTCTGTGCACCTGCGGGCGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587893.1
CDS-3UTR CAA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCACGGAGAGGTCTCCGTaGAGAGTGCTGTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVTERSP*RVLWEP
Trigger: GGGCTCCCACAGCACTCTCAACGGAGACCTCTCCGT...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTTCCAAGATCGAGAACTaGAAGGGCTGGCCGGACTGG +
Preference number: 5 (lower is better)
Translates to: RQGWEAAARMSVLAADSPSKIEN*KGWPDW
Trigger: CCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGGA...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTTTCAGGATGAGCTCCTaGGCTCTAGGCAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAFRMSS*ALGSGE
Trigger: CTCACCGCTGCCTAGAGCCAAGGAGCTCATCCTGAA...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGTTCAGGATGAGCTCCTaGGCTCTAGGCAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLFRMSS*ALGSGE
Trigger: CTCACCGCTGCCTAGAGCCAAGGAGCTCATCCTGAA...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTTGGTATTTCTCCGGCTaGCGGACGTGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: RQGWEAAARMSVLAADSPWYFSG*RTCRIS
Trigger: GGAGATCCTGCACGTCCGCAAGCCGGAGAAATACCA...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATAGGCGCCACCAGAGCTaGATGATATGGAGGCGGCAA +
Preference number: 5 (lower is better)
Translates to: VPRQGWEAAARMSVLAADRRHQS*MIWRRQ
Trigger: TTGCCGCCTCCATATCATCAAGCTCTGGTGGCGCCT...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS-3UTR CAA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGTCCAAGATCGAGAACTaGAAGGGCTGGCCGGACTGG +
Preference number: 5 (lower is better)
Translates to: WEAAARMSVLAADSPGSLSKIEN*KGWPDW
Trigger: CCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGGA...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTCCAAGATCGAGAACTaGAAGGGCTGGCCGGACTGG +
Preference number: 5 (lower is better)
Translates to: EAAARMSVLAADSPGSLDSKIEN*KGWPDW
Trigger: CCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGGA...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCAAGATCGAGAACTaGAAGGGCTGGCCGGACTGG +
Preference number: 5 (lower is better)
Translates to: VPRQGWEAAARMSVLAADSKIEN*KGWPDW
Trigger: CCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGGA...ATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGACGGAGAGGTCTCCGTaGAGAGTGCTGTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRTERSP*RVLWEP
Trigger: GGGCTCCCACAGCACTCTCAACGGAGACCTCTCCGT...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAACGGAGAGGTCTCCGTaGAGAGTGCTGTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGTERSP*RVLWEP
Trigger: GGGCTCCCACAGCACTCTCAACGGAGACCTCTCCGT...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCAGGATCTCCACGTaGCTACTCTCCATTCCGACC +
Preference number: 5 (lower is better)
Translates to: AGRRLLGCLSWLLIPLGVCRIST*LLSIPT
Trigger: GGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCA...GACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGTGCAGGATCTCCACGTaGCTACTCTCCATTCCGACC +
Preference number: 5 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWCRIST*LLSIPT
Trigger: GGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCA...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGTGCAGGATCTCCACGTaGCTACTCTCCATTCCGACC +
Preference number: 5 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLCRIST*LLSIPT
Trigger: GGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCA...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGTGGTATTTCTCCGGCTaGCGGACGTGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLWYFSG*RTCRIS
Trigger: GGAGATCCTGCACGTCCGCAAGCCGGAGAAATACCA...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS CCA 90 bp CAGACGCTTCACAATCTCCGCTCAGACGCAGACACTCAGAGGTGCTaGGCTCAGCTGAAACAAAGGAAAGGGGCCTCCGCCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: QTLHNLRSDADTQRC*AQLKQRKGASAWSP
Trigger: GGGACTCCAGGCGGAGGCCCCTTTCCTTTGTTTCAGCTGAGCCCAGCACCTCTGAGTGTCTGCGTCTGAGCGGAGATTGTGAAGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587770.5
CDS-3UTR CAA 90 bp ATGGGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCTTCAGGATGAGCTCCTaGGCTCTAGGCAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: MGCTVPRQGWEAAARMSVFRMSS*ALGSGE
Trigger: CTCACCGCTGCCTAGAGCCAAGGAGCTCATCCTGAA...GACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp CGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGTTCAGGATGAGCTCCTaGGCTCTAGGCAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: RLLGCLSWLLIPLGVWTSFRMSS*ALGSGE
Trigger: CTCACCGCTGCCTAGAGCCAAGGAGCTCATCCTGAA...CGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp ATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGAAGACGGAGAGGTCTCCGTaGAGAGTGCTGTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: MSVLAADSPGSLDFGYRKTERSP*RVLWEP
Trigger: GGGCTCCCACAGCACTCTCAACGGAGACCTCTCCGT...CTTCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTGCAGGATCTCCACGTaGCTACTCTCCATTCCGACC +
Preference number: 5 (lower is better)
Translates to: EAAARMSVLAADSPGSLDCRIST*LLSIPT
Trigger: GGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCA...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGTGCAGGATCTCCACGTaGCTACTCTCCATTCCGACC +
Preference number: 5 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWCRIST*LLSIPT
Trigger: GGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCA...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTGGTATTTCTCCGGCTaGCGGACGTGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AARMSVLAADSPGSLDFGWYFSG*RTCRIS
Trigger: GGAGATCCTGCACGTCCGCAAGCCGGAGAAATACCA...CCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGACTGAGGACGACTCCTaGGACTGGAAAATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: WEAAARMSVLAADSPGSLTEDDS*DWKMLA
Trigger: GGCCAGCATTTTCCAGTCCAAGGAGTCGTCCTCAGT...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CAA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACACTGAGGACGACTCCTaGGACTGGAAAATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: EAAARMSVLAADSPGSLDTEDDS*DWKMLA
Trigger: GGCCAGCATTTTCCAGTCCAAGGAGTCGTCCTCAGT...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS TCA 90 bp GGGGGCGAGGGAGATGCACTCTCCTGGGTCAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGACGCTTCACAATCTCCGCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: GGEGDALSWVRKGII*AQIPLRRFTISACL
Trigger: TAAGCAGGCGGAGATTGTGAAGCGTCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCTGACCCAGGAGAGTGCATCTCCCTCGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587137.5
CDS GCA 90 bp GCTCAGACGCTTCACAATCTCCGCTCAGACGCAGACACTCAGAGGTaGTGGGCTCAGCTGAAACAAAGGAAAGGGGCCTCCGCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: AQTLHNLRSDADTQR*WAQLKQRKGASAWS
Trigger: ACTCCAGGCGGAGGCCCCTTTCCTTTGTTTCAGCTGAGCCCAGCACCTCTGAGTGTCTGCGTCTGAGCGGAGATTGTGAAGCGTCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587770.5
CDS CCA 90 bp CGGTCGCAGATCTCCAAGATCGAGAACTTGAAGGGCTGGCCGGACTaGAGCGGGGTCTGTAATCCTGAAGCAGGAGAATCTTGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: RSQISKIENLKGWPD*SGVCNPEAGESWEA
Trigger: CGCCTCCCAAGATTCTCCTGCTTCAGGATTACAGACCCCGCTCCAGTCCGGCCAGCCCTTCAAGTTCTCGATCTTGGAGATCTGCGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5
CDS-3UTR CAA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTTTCAGGATGAGCTCCTaGGCTCTAGGCAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGFRMSS*ALGSGE
Trigger: CTCACCGCTGCCTAGAGCCAAGGAGCTCATCCTGAA...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp AGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGTGGTATTTCTCCGGCTaGCGGACGTGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: RMSVLAADSPGSLDFGYRWYFSG*RTCRIS
Trigger: GGAGATCCTGCACGTCCGCAAGCCGGAGAAATACCA...CCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp CTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTTGGTATTTCTCCGGCTaGCGGACGTGCAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LLGCLSWLLIPLGVWTSGWYFSG*RTCRIS
Trigger: GGAGATCCTGCACGTCCGCAAGCCGGAGAAATACCA...ACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCACTGAGGACGACTCCTaGGACTGGAAAATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AAARMSVLAADSPGSLDFTEDDS*DWKMLA
Trigger: GGCCAGCATTTTCCAGTCCAAGGAGTCGTCCTCAGT...GAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262953.11
ENST00000443826.7
ENST00000455444.6
CDS-3UTR CAA 90 bp AGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTCTTGAGGCTGTGGTATaGAGCCTGAAGAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: RQGWEAAARMSVLAADSPLEAVV*SLKKLE
Trigger: TTCCAGTTTCTTCAGGCTCAATACCACAGCCTCAAG...AGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTTGAGGCTGTGGTATaGAGCCTGAAGAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: VRFLGRAGRRLLGCLSWLLEAVV*SLKKLE
Trigger: TTCCAGTTTCTTCAGGCTCAATACCACAGCCTCAAG...CAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GGATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGCTTGAGGCTGTGGTATaGAGCCTGAAGAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: GCTVPRQGWEAAARMSVLLEAVV*SLKKLE
Trigger: TTCCAGTTTCTTCAGGCTCAATACCACAGCCTCAAG...CAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp TGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGCTTGAGGCTGTGGTATaGAGCCTGAAGAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: WEAAARMSVLAADSPGSLLEAVV*SLKKLE
Trigger: TTCCAGTTTCTTCAGGCTCAATACCACAGCCTCAAG...CAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GATGTACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTTGAGGCTGTGGTATaGAGCCTGAAGAAACTGGAA +
Preference number: 5 (lower is better)
Translates to: DVRFLGRAGRRLLGCLSWLEAVV*SLKKLE
Trigger: TTCCAGTTTCTTCAGGCTCAATACCACAGCCTCAAG...CCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGCCTGTCACGATGTATTaGTTATTTCTGGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: GRRLLGCLSWLLIPLGVWPVTMY*LFLEMS
Trigger: TGACATCTCCAGAAATAACAAATACATCGTGACAGG...CCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp ACGGTTCCTAGGCAGGGCTGGGAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTCCTGTCACGATGTATTaGTTATTTCTGGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: TVPRQGWEAAARMSVLAAPVTMY*LFLEMS
Trigger: TGACATCTCCAGAAATAACAAATACATCGTGACAGG...AGCAGCCAGGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GAGGCGGCTGCTAGGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACCCTGTCACGATGTATTaGTTATTTCTGGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: EAAARMSVLAADSPGSLDPVTMY*LFLEMS
Trigger: TGACATCTCCAGAAATAACAAATACATCGTGACAGG...GTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCCTAGCAGCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS-3UTR CAA 90 bp GGATGTCTGTCCTGGCTGCTGATTCCCCTGGGAGTCTGGACTTCGGGTACAGGACCTGTCACGATGTATTaGTTATTTCTGGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: GCLSWLLIPLGVWTSGTGPVTMY*LFLEMS
Trigger: TGACATCTCCAGAAATAACAAATACATCGTGACAGG...TCCTGTACCCGAAGTCCAGACTCCCAGGGGAATCAGCAGCCAGGACAGACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000591529.5
CDS CCA 72 bp AGGGAGGAGGGAGAAGCGGCGCGGGGCAAGGGACCCTaGAGTCCCTGGCGCGCCCCCAAGCGCGCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: REEGEAARGKGP*SPWRAPKRARP
Trigger: CGGGCGCGCGCGCTTGGGGGCGCGCCAGGGACTCCAGGGTCCCTTGCCCCGCGCCGCTTCTCCCTCCTCCCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262953.11
CDS TCA 72 bp TGGACCCCTCGGCCTCCACGCCCGCACGGTCCTCCTTaGCAGCCGCCGCCAGCTGAGCCTGGGCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: WTPRPPRPHGPP*QPPPAEPGQPG
Trigger: CCCTGGCTGCCCAGGCTCAGCTGGCGGCGGCTGTCAAGGAGGACCGTGCGGGCGTGGAGGCCGAGGGGTCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000587217.5
ENST00000587672.5
ENST00000589205.5
ENST00000589291.1
ENST00000590101.5
ENST00000590183.5
ENST00000590536.5
ENST00000591529.5
CDS GCA 72 bp GCGCAGACCACCTCGCCATGGGCCAGCGTGTGCAGCTaGCGGGCGTGCCGCGGGATGCCCGCGCCTACCAGT +
Preference number: 6 (lower is better)
Translates to: AQTTSPWASVCS*RACRGMPAPTS
Trigger: ACTGGTAGGCGCGGGCATCCCGCGGCACGCCCGGCAGCTGCACACGCTGGCCCATGGCGAGGTGGTCTGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000586492.1
ENST00000589364.5
ENST00000590536.5
ENST00000591529.5
CDS CCA 72 bp AGGGAGATGCACTCCTGCTCGGGGCTCTCTCCACTCTaGACCCCTCGGCCTCCACGCCCGCACGGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: REMHSCSGLSPL*TPRPPRPHGPP
Trigger: AGGAGGACCGTGCGGGCGTGGAGGCCGAGGGGTCCAGAGTGGAGAGAGCCCCGAGCAGGAGTGCATCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000587217.5
ENST00000589291.1
ENST00000590101.5
ENST00000590183.5
ENST00000590536.5
ENST00000591529.5
CDS CCA 72 bp AAGGTGCTGGCTTGGCAGCAAGCTGGCAGAGGTGACTaGCCGAGCTGGGCCCGGGGGTGGAAGCGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: KVLAWQQAGRGD*PSWARGWKRPG
Trigger: CCCAGGACGCTTCCACCCCCGGGCCCAGCTCGGCCAGTCACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000587672.5
ENST00000589205.5
ENST00000590536.5
ENST00000591529.5
CDS GCA 72 bp CAGGGGGCTCCTCAGGGCGACGCTGTCCGTGGAAGGTaGTGGCTTGGCAGCAAGCTGGCAGAGGTGACTGGC +
Preference number: 6 (lower is better)
Translates to: QGAPQGDAVRGR*WLGSKLAEVTG
Trigger: GCCAGTCACCTCTGCCAGCTTGCTGCCAAGCCAGCACCTTCCACGGACAGCGTCGCCCTGAGGAGCCCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000587672.5
ENST00000589205.5
ENST00000590536.5
ENST00000591529.5
CDS CCA 72 bp GGCCTCCGCCTGGAGTCCCAGATTCCAGCCCCGGCTTaGCCCACGTCTGTCCCAGGCAAGGCCCCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: GLRLESQIPAPA*PTSVPGKAPFL
Trigger: CAAGAAAGGGGCCTTGCCTGGGACAGACGTGGGCCAAGCCGGGGCTGGAATCTGGGACTCCAGGCGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587770.5
CDS GCA 72 bp TGCCCGATGAGGCTGTTCAGCTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCCTGGAGCACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CPMRLFSSPTVT*LARSTAWSTCC
Trigger: GCAGCAGGTGCTCCAGGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGAGCTGAACAGCCTCATCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000586422.5
ENST00000587217.5
ENST00000589291.1
ENST00000590183.5
ENST00000590536.5
ENST00000591529.5
ENST00000592584.1
CDS GCA 72 bp CTCCTCCTCCACGAGACTCTCAGGGGGCGAGGGAGATaGACTCCTGCTCGGGGCTCTCTCCACTCTGGACCC +
Preference number: 6 (lower is better)
Translates to: LLLHETLRGRGR*TPARGSLHSGP
Trigger: GGGTCCAGAGTGGAGAGAGCCCCGAGCAGGAGTGCATCTCCCTCGCCCCCTGAGAGTCTCGTGGAGGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000587217.5
ENST00000589291.1
ENST00000590101.5
ENST00000590183.5
ENST00000590536.5
ENST00000591529.5
CDS GCA 72 bp CTCCCGATGAGGCTGTTCAGCTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCCTGGAGCACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: LPMRLFSSPTVT*LARSTAWSTCC
Trigger: GCAGCAGGTGCTCCAGGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGAGCTGAACAGCCTCATCGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443826.7
ENST00000455444.6
CDS GCA 72 bp ACCCCGATGAGGCTGTTCAGCTCCCCCACGGTGACCTaGTTGGCGCGTTCTACGGCCTGGAGCACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TPMRLFSSPTVT*LARSTAWSTCC
Trigger: GCAGCAGGTGCTCCAGGCCGTAGAACGCGCCAAGCAGGTCACCGTGGGGGAGCTGAACAGCCTCATCGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587770.5
ENST00000589364.5
ENST00000590101.5
ENST00000591720.1
ENST00000592305.5
CDS CCA 72 bp GGCCCACACACCACCCCAGCTTTAACACCTCCTGGGTaGGTGCCAGGGACCTGGGAGTGGGCGTCTCCCCAT +
Preference number: 6 (lower is better)
Translates to: GPHTTPALTPPG*VPGTWEWASPH
Trigger: ATGGGGAGACGCCCACTCCCAGGTCCCTGGCACCCACCCAGGAGGTGTTAAAGCTGGGGTGGTGTGTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587770.5
ENST00000590101.5
ENST00000591720.1
ENST00000592305.5
CDS CCA 72 bp TGGGCTCAGCTGAAACAAAGGAAAGGGGCCTCCGCCTaGAGTCCCAGATTCCAGCCCCGGCTTGGCCCACGT +
Preference number: 6 (lower is better)
Translates to: WAQLKQRKGASA*SPRFQPRLGPR
Trigger: ACGTGGGCCAAGCCGGGGCTGGAATCTGGGACTCCAGGCGGAGGCCCCTTTCCTTTGTTTCAGCTGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587770.5
CDS GCA 72 bp ACACGTGGAAGGAGTAGGCCGGCTTTCCCCCAGGGATaGTGGGTAGGGAGGAAGAGACGGATGACCCTCGGA +
Preference number: 6 (lower is better)
Translates to: TRGRSRPAFPQG*WVGRKRRMTLG
Trigger: TCCGAGGGTCATCCGTCTCTTCCTCCCTACCCAGCATCCCTGGGGGAAAGCCGGCCTACTCCTTCCACGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000589364.5
ENST00000590536.5
ENST00000591529.5
CDS CCA 72 bp CGTGGAAGGAGTAGGCCGGCTTTCCCCCAGGGATGCTaGGTAGGGAGGAAGAGACGGATGACCCTCGGAGAT +
Preference number: 6 (lower is better)
Translates to: RGRSRPAFPQGC*VGRKRRMTLGD
Trigger: ATCTCCGAGGGTCATCCGTCTCTTCCTCCCTACCCAGCATCCCTGGGGGAAAGCCGGCCTACTCCTTCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000589364.5
ENST00000590536.5
ENST00000591529.5
CDS CAA 72 bp GGAGTGCTGGCGGGAAGGTCATTCAGGATGAGCTCCTaGGCTCTAGGCAGCGGTGAGCCAAGGCTAGAGGCC +
Preference number: 6 (lower is better)
Translates to: GVLAGRSFRMSS*ALGSGEPRLEA
Trigger: GGCCTCTAGCCTTGGCTCACCGCTGCCTAGAGCCAAGGAGCTCATCCTGAATGACCTTCCCGCCAGCACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000587672.5
ENST00000589205.5
ENST00000590536.5
ENST00000591529.5
CDS TCA 72 bp AGGGAGGAAGAGACGGATGACCCTCGGAGATGGGGATaGGACTCAAATGCCATCACGGGGGAGCGTCCGTAC +
Preference number: 6 (lower is better)
Translates to: REEETDDPRRWG*DSNAITGERPY
Trigger: GTACGGACGCTCCCCCGTGATGGCATTTGAGTCTCATCCCCATCTCCGAGGGTCATCCGTCTCTTCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000589364.5
ENST00000590536.5
ENST00000591529.5
CDS GCA 72 bp ATTTCTCCGGCTTGCGGACGTGCAGGATCTCCACGTTaGTACTCTCCATTCCGACCGCCAGCCAGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: ISPACGRAGSPR*YSPFRPPASPG
Trigger: ACCAGGACTGGCTGGCGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGAGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000590536.5
ENST00000591529.5
CDS CCA 72 bp CACAATCTCCGCTCAGACGCAGACACTCAGAGGTGCTaGGCTCAGCTGAAACAAAGGAAAGGGGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: HNLRSDADTQRC*AQLKQRKGASA
Trigger: GGCGGAGGCCCCTTTCCTTTGTTTCAGCTGAGCCCAGCACCTCTGAGTGTCTGCGTCTGAGCGGAGATTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587770.5
CDS CAA 72 bp TATTTCTCCGGCTTGCGGACGTGCAGGATCTCCACGTaGCTACTCTCCATTCCGACCGCCAGCCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: YFSGLRTCRIST*LLSIPTASQSW
Trigger: CCAGGACTGGCTGGCGGTCGGAATGGAGAGTAGCAACGTGGAGATCCTGCACGTCCGCAAGCCGGAGAAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000590536.5
ENST00000591529.5
CDS CAA 90 bp GCCTGGCAGGAAGCAATGAGAGGAAGCTTGGAGCGGGGTAGAGATTaGCAACCCAGCTCTGGACTCCCAGGCGGACCAGGTGTTGGCAAA +
Preference number: 6 (lower is better)
Translates to: AWQEAMRGSLERGRD*QPSSGLPGGPGVGK
Trigger: TTTGCCAACACCTGGTCCGCCTGGGAGTCCAGAGCTGGGTTGCAAATCTCTACCCCGCTCCAAGCTTCCTCTCATTGCTTCCTGCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587893.1
CDS CAA 90 bp AGACGCTTCACAATCTCCGCCTGGCAGGAAGCAATGAGAGGAAGCTaGGAGCGGGGTAGAGATTTGCAACCCAGCTCTGGACTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRFTISAWQEAMRGS*ERGRDLQPSSGLPG
Trigger: GCCTGGGAGTCCAGAGCTGGGTTGCAAATCTCTACCCCGCTCCAAGCTTCCTCTCATTGCTTCCTGCCAGGCGGAGATTGTGAAGCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587893.1
CDS GCA 72 bp CGCCCACGATCAGACTCCGGCCATCCGGCAGCAACTTaGAGGAACGAATGTAGTTGTCTCGGTTCAGGCAGT +
Preference number: 6 (lower is better)
Translates to: RPRSDSGHPAAT*RNECSCLGSGS
Trigger: ACTGCCTGAACCGAGACAACTACATTCGTTCCTGCAAGTTGCTGCCGGATGGCCGGAGTCTGATCGTGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262953.11
ENST00000426948.6
ENST00000443826.7
ENST00000455444.6
ENST00000589364.5
ENST00000590536.5
ENST00000591529.5
CDS CAA 72 bp GAAGCAATGAGAGGAAGCTTGGAGCGGGGTAGAGATTaGCAACCCAGCTCTGGACTCCCAGGCGGACCAGGT +
Preference number: 6 (lower is better)
Translates to: EAMRGSLERGRD*QPSSGLPGGPG
Trigger: ACCTGGTCCGCCTGGGAGTCCAGAGCTGGGTTGCAAATCTCTACCCCGCTCCAAGCTTCCTCTCATTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587893.1
CDS GCA 72 bp CGCCCACGATCAGACTCCGGCCATCCGGCAGCAACTTaGAGGAACGAATGTAGTTGTCTCGGTTCTTCACAC +
Preference number: 6 (lower is better)
Translates to: RPRSDSGHPAAT*RNECSCLGSSH
Trigger: GTGTGAAGAACCGAGACAACTACATTCGTTCCTGCAAGTTGCTGCCGGATGGCCGGAGTCTGATCGTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586492.1
CDS GCA 72 bp CTTCACAATCTCCGCTCAGACGCAGACACTCAGAGGTaGTGGGCTCAGCTGAAACAAAGGAAAGGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LHNLRSDADTQR*WAQLKQRKGAS
Trigger: GGAGGCCCCTTTCCTTTGTTTCAGCTGAGCCCAGCACCTCTGAGTGTCTGCGTCTGAGCGGAGATTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587770.5
CDS TCA 72 bp GGAGATGCACTCTCCTGGGTCAGGAAGGGGATAATCTaGGCGCAGATACCGCTCAGACGCTTCACAATCTCC +
Preference number: 6 (lower is better)
Translates to: GDALSWVRKGII*AQIPLRRFTIS
Trigger: GGAGATTGTGAAGCGTCTGAGCGGTATCTGCGCTCAGATTATCCCCTTCCTGACCCAGGAGAGTGCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587137.5
CDS CAA 72 bp ACAATCTCCGCCTGGCAGGAAGCAATGAGAGGAAGCTaGGAGCGGGGTAGAGATTTGCAACCCAGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: TISAWQEAMRGS*ERGRDLQPSSG
Trigger: TCCAGAGCTGGGTTGCAAATCTCTACCCCGCTCCAAGCTTCCTCTCATTGCTTCCTGCCAGGCGGAGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587893.1
CDS TCA 72 bp GTATTTGTTATTTCTGGAGATGTCACAACTCAGGACTaGGGACGACTCCTTGGACGCAGGAGGCAAACTTCA +
Preference number: 6 (lower is better)
Translates to: VFVISGDVTTQD*GRLLGRRRQTS
Trigger: TGAAGTTTGCCTCCTGCGTCCAAGGAGTCGTCCTCAGTCCTGAGTTGTGACATCTCCAGAAATAACAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426948.6
ENST00000591529.5