RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TLCD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185561, ENSG00000275246

Ensembl transcript IDs: ENST00000330676.8, ENST00000611774.2

Found 422 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCTGCTGCGCCCAGCCAGAGGGCCAGCTATTCCTTTATCCTCCTaGAGCCTTCTCTCACACAGTCTACCTCTGCCCTTGTTCTTCCAT +
Preference number: 1 (lower is better)
Translates to: ELLRPARGPAIPLSS*SLLSHSLPLPLFFH
Trigger: ATGGAAGAACAAGGGCAGAGGTAGACTGTGTGAGAGAAGGCTGCAGGAGGATAAAGGAATAGCTGGCCCTCTGGCTGGGCGCAGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp CAATTCGTGTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTaGCCCACCTGGGAGCTGACCTCACTCTTCCTGTATGGGCTTGAC +
Preference number: 1 (lower is better)
Translates to: QFVCGPKFFQASTTS*PTWELTSLFLYGLD
Trigger: GTCAAGCCCATACAGGAAGAGTGAGGTCAGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACACACGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp ATGGAGTCCGTCTTGAGGACCATTTCCCTGGGCCACGGTAAAGTCTaGCGAAGCACCACTGTGCTAAGCAGACTCCTACCAAATGGAGCA +
Preference number: 1 (lower is better)
Translates to: MESVLRTISLGHGKV*RSTTVLSRLLPNGA
Trigger: TGCTCCATTTGGTAGGAGTCTGCTTAGCACAGTGGTGCTTCGCCAGACTTTACCGTGGCCCAGGGAAATGGTCCTCAAGACGGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR TCA 90 bp CTGCAGCCTTCTCTCACACAGTCTACCTCTGCCCTTGTTCTTCCATaGAAGCCTGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: LQPSLTQSTSALVLP*KPGPGKTLYWAPFL
Trigger: AAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCATGGAAGAACAAGGGCAGAGGTAGACTGTGTGAGAGAAGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR TCA 90 bp ACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTCTTCTaGTCTCTCTATCTGCCAGTATTTCCTCCATCACTCCTGAGCCTG +
Preference number: 1 (lower is better)
Translates to: TRPRSSLFPPLLLLF*SLYLPVFPPSLLSL
Trigger: CAGGCTCAGGAGTGATGGAGGAAATACTGGCAGATAGAGAGATCAGAAGAGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp TACCAGTCTCTGCCGACCGGTTACTGTCAGCCTGTCTTTAGGGTTTaGGCTGCAGCTGTTTGTCCTTTGTCTTTCTGCCTGCCTCCAAGT +
Preference number: 1 (lower is better)
Translates to: YQSLPTGYCQPVFRV*AAAVCPLSFCLPPS
Trigger: ACTTGGAGGCAGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGGCTGACAGTAACCGGTCGGCAGAGACTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp GCCTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTaGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTG +
Preference number: 1 (lower is better)
Translates to: AFLKFHWLTMVAIRV*SQILPSVHYILPHL
Trigger: CAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp GTTGCCTCTCTCAGTCCATTGTTTAGTGGAACAGCAGACTTAATCTaGTGGGCACTTCCCGTCACCTCGATGTTCTGGGAAGGAAGGGGT +
Preference number: 1 (lower is better)
Translates to: VASLSPLFSGTADLI*WALPVTSMFWEGRG
Trigger: ACCCCTTCCTTCCCAGAACATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAATGGACTGAGAGAGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp CCTGTCTTTAGGGTTTGCGCTGCAGCTGTTTGTCCTTTGTCTTTCTaGCTGCCTCCAAGTCCCCATATCTCCTGGTCTCTTCTGTCAGTG +
Preference number: 1 (lower is better)
Translates to: PVFRVCAAAVCPLSF*LPPSPHISWSLLSV
Trigger: CACTGACAGAAGAGACCAGGAGATATGGGGACTTGGAGGCAGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp TTGACACCCCTGATTCTGACTTGTCCTTATCTTCCTACCAGTCTCTaGCGACCGGTTACTGTCAGCCTGTCTTTAGGGTTTGCGCTGCAG +
Preference number: 1 (lower is better)
Translates to: LTPLILTCPYLPTSL*RPVTVSLSLGFALQ
Trigger: CTGCAGCGCAAACCCTAAAGACAGGCTGACAGTAACCGGTCGGCAGAGACTGGTAGGAAGATAAGGACAAGTCAGAATCAGGGGTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp GCCTCTCTCAGTCCATTGTTTAGTGGAACAGCAGACTTAATCTGCTaGGCACTTCCCGTCACCTCGATGTTCTGGGAAGGAAGGGGTCTT +
Preference number: 1 (lower is better)
Translates to: ASLSPLFSGTADLIC*ALPVTSMFWEGRGL
Trigger: AAGACCCCTTCCTTCCCAGAACATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAATGGACTGAGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp GATCTCTCTGATCCTAGTGGGACTTCACCTTCCCCCATCTGTCCCTaGGTTAAAGCAAAGAGCTTCTGTCTCCACTGGCAGTTTCTTCCA +
Preference number: 1 (lower is better)
Translates to: DLSDPSGTSPSPICP*VKAKSFCLHWQFLP
Trigger: TGGAAGAAACTGCCAGTGGAGACAGAAGCTCTTTGCTTTAACCCAGGGACAGATGGGGGAAGGTGAAGTCCCACTAGGATCAGAGAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp ACCAGAAACATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTaGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCT +
Preference number: 1 (lower is better)
Translates to: TRNISSNCCGPGSVS*QLSRPSLLLQIAPP
Trigger: AGGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp CAGGAGTGTGGCTTTGAGAACCAGAAACATCAGCAGCAATTGCTGTaGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCT +
Preference number: 1 (lower is better)
Translates to: QECGFENQKHQQQLL*PRFCLLATITSISA
Trigger: AGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp CACACAGTCTACCTCTGCCCTTGTTCTTCCATGAAAGCCTGGGCCTaGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGAC +
Preference number: 1 (lower is better)
Translates to: HTVYLCPCSSMKAWA*ENSVLGTFPSVILD
Trigger: GTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCATGGAAGAACAAGGGCAGAGGTAGACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 90 bp TTCTCTCACACAGTCTACCTCTGCCCTTGTTCTTCCATGAAAGCCTaGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATT +
Preference number: 1 (lower is better)
Translates to: FSHTVYLCPCSSMKA*AWENSVLGTFPSVI
Trigger: AATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCATGGAAGAACAAGGGCAGAGGTAGACTGTGTGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp AAAAACAGGAGTGTGGCTTTGAGAACCAGAAACATCAGCAGCAATTaGTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCT +
Preference number: 1 (lower is better)
Translates to: KNRSVALRTRNISSN*CGPGSVSWQLSRPS
Trigger: AGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp TGTTTCTCCTTGTCACTCACTCTATTTCACTGTCTAGACTCTCTGTaGCTTTCAGCCTTGGGGTCTCTTCTTGTCGGCCTTCATTTCTAT +
Preference number: 1 (lower is better)
Translates to: CFSLSLTLFHCLDSL*LSALGSLLVGLHFY
Trigger: ATAGAAATGAAGGCCGACAAGAAGAGACCCCAAGGCTGAAAGGCACAGAGAGTCTAGACAGTGAAATAGAGTGAGTGACAAGGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 90 bp TCCAATTCTCTGCCTACTTACTCAGTTGTAATCACAATCCAGTCCTaGCTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGT +
Preference number: 1 (lower is better)
Translates to: SNSLPTYSVVITIQS*LPQVSLAHHGSNSC
Trigger: ACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGCAGAGAATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTACGACCTCGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLATTSAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGGTCGT...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCACAGGAGTGTGGCTTTaGGAACCAGAAACATCAGCA +
Preference number: 2 (lower is better)
Translates to: SPASASSVAGITGACHHATGVWL*EPETSA
Trigger: TGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTTGTGCCTTTCAGCCTTaGGGTCTCTTCTTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: VWSQILPSVHYILPHLGACAFQP*GLFLSA
Trigger: GGCCGACAAGAAGAGACCCCAAGGCTGAAAGGCACA...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTAGGCAGAGATTGCAGTaGGCCAAGATCAAGCCACTG +
Preference number: 2 (lower is better)
Translates to: VWSQILPSVHYILPHLGARQRLQ*AKIKPL
Trigger: CAGTGGCTTGATCTTGGCTCACTGCAATCTCTGCCT...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCTGGTCTTGAACTCCTaGGCTCAACCACTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: VWSQILPSVHYILPHLGALVLNS*AQPLLL
Trigger: TAGGAGGAGTGGTTGAGCTCAGGAGTTCAAGACCAG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTATTCCTTTATCCTCCTaGAGCCTTCTCTCACACAGT +
Preference number: 2 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAIPLSS*SLLSHS
Trigger: ACTGTGTGAGAGAAGGCTGCAGGAGGATAAAGGAAT...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATTTGCCCAGGCTGGAGTaGAGTGGCACGACCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNLPRLE*SGTTSA
Trigger: AGCCGAGGTCGTGCCACTGCACTCCAGCCTGGGCAA...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp GCCCCTTCCCTGTCCTGGAGGACAAAGAAATCATTAGCAAGTAGCTaGGTAGACATGGAGTCCGTCTTGAGGACCATTTCCCTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: APSLSWRTKKSLASS*VDMESVLRTISLGH
Trigger: GTGGCCCAGGGAAATGGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGTCCTCCAGGACAGGGAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGTCTGGCCCTCACCCTaGTGGGGGACTGTGCATGGA +
Preference number: 2 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCVWPSP*WGTVHG
Trigger: TCCATGCACAGTCCCCCATCAGGGTGAGGGCCAGAC...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATACCTGATGGGGGACTGTaGATGGAAGACCCTCATCTC +
Preference number: 2 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIPDGGL*MEDPHL
Trigger: GAGATGAGGGTCTTCCATGCACAGTCCCCCATCAGG...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTAATTCTAGACTTCAGTaGCGTCCTAAGAAGACAAAC +
Preference number: 2 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLANSRLQ*RPKKTN
Trigger: GTTTGTCTTCTTAGGACGGCACTGAAGTCTAGAATT...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATACGATCTTGGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNTILAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCGT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCCAGGTTCTGTCTCTTaGCAACTATCACGTCCATCT +
Preference number: 2 (lower is better)
Translates to: VWSQILPSVHYILPHLGAPGSVS*QLSRPS
Trigger: AGATGGACGTGATAGTTGCCAAGAGACAGAACCTGG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTTCTTCCATGAAAGCCTaGGCCTGGGAAAACTCTGTA +
Preference number: 2 (lower is better)
Translates to: VWSQILPSVHYILPHLGASSMKA*AWENSV
Trigger: TACAGAGTTTTCCCAGGCCCAGGCTTTCATGGAAGA...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTGAAGGGGAAGGGATGTaGGTTAGCTGGAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCEGEGM*VSWKRN
Trigger: GTTTCTCTTCCAGCTAACTCACATCCCTTCCCCTTC...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGGCCTGGGCAACATGGTaGAACCTCCTCTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: LFSGTADLICWALPVTSMAWATW*NLLSTK
Trigger: TTTGGTGGAGAGGAGGTTTCACCATGTTGCCCAGGC...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGGCAGTTTCTTCCAGCTaGATGCCTCCTGCCACCCTT +
Preference number: 2 (lower is better)
Translates to: LFSGTADLICWALPVTSMAVSSS*MPPATL
Trigger: AAGGGTGGCAGGAGGCATGCAGCTGGAAGAAACTGC...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAACAGGCGTGAGCTGCTaGGCCCAGCCAGAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLTGVSC*AQPEGQ
Trigger: CTGGCCCTCTGGCTGGGCGCAGCAGCTCACGCCTGT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp AACCAGAAACATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTaGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCC +
Preference number: 2 (lower is better)
Translates to: NQKHQQQLLWPRFCL*ATITSISAATDSTS
Trigger: GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp TACTGTCAGCCTGTCTTTAGGGTTTGCGCTGCAGCTGTTTGTCCTTaGTCTTTCTGCCTGCCTCCAAGTCCCCATATCTCCTGGTCTCTT +
Preference number: 2 (lower is better)
Translates to: YCQPVFRVCAAAVCP*SFCLPPSPHISWSL
Trigger: AAGAGACCAGGAGATATGGGGACTTGGAGGCAGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGGCTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGATGACGGATTTCAGTaGACAGAAACCCAGGTTCCC +
Preference number: 2 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIDDGFQ*TETQVP
Trigger: GGGAACCTGGGTTTCTGTTCACTGAAATCCGTCATC...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGGCAGGACAATCACTTaGACCCAGGAGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNGRTIT*TQEAEV
Trigger: AACCTCAGCCTCCTGGGTTCAAGTGATTGTCCTGCC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCTTCCTGTATGGGCTTaGCTAGTTAATCCACAGAAA +
Preference number: 2 (lower is better)
Translates to: VWSQILPSVHYILPHLGALPVWA*LVNPQK
Trigger: TTTCTGTGGATTAACTAGTCAAGCCCATACAGGAAG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCCCTGATGGGGGACTGTaGATGGAAGACCCTCATCTC +
Preference number: 2 (lower is better)
Translates to: WAWENSVLGTFPSVILDFPDGGL*MEDPHL
Trigger: GAGATGAGGGTCTTCCATGCACAGTCCCCCATCAGG...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTaGAGGACCATTTCCCTGGGCCACGGTAAAGTCTGGCGAAGCACC +
Preference number: 2 (lower is better)
Translates to: TKKSLASSLVDMESV*RTISLGHGKVWRST
Trigger: GGTGCTTCGCCAGACTTTACCGTGGCCCAGGGAAATGGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGTCTGGCCCTCACCCTaGTGGGGGACTGTGCATGGA +
Preference number: 2 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMVWPSP*WGTVHG
Trigger: TCCATGCACAGTCCCCCATCAGGGTGAGGGCCAGAC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCCAGCTGCATGCCTCCTaGCACCCTTTACTGATAGCT +
Preference number: 2 (lower is better)
Translates to: WAWENSVLGTFPSVILDFQLHAS*HPLLIA
Trigger: AGCTATCAGTAAAGGGTGGCAGGAGGCATGCAGCTG...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGTTTCTTCCAGCTGCATaGCTCCTGCCACCCTTTACT +
Preference number: 2 (lower is better)
Translates to: LFSGTADLICWALPVTSMFLPAA*LLPPFT
Trigger: AGTAAAGGGTGGCAGGAGGCATGCAGCTGGAAGAAA...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGCCCAGGCTGGAGTaGAGTGGCACGACCTCGGCT +
Preference number: 2 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVLPRLE*SGTTSA
Trigger: AGCCGAGGTCGTGCCACTGCACTCCAGCCTGGGCAA...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCTCCCCCATCTGTCCCTaGGTTAAAGCAAAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: FCLLATITSISAATDSTSSPICP*VKAKSF
Trigger: GAAGCTCTTTGCTTTAACCCAGGGACAGATGGGGGA...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATATGAAAGCCTGGGCCTaGGAAAACTCTGTACTGGGC +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNMKAWA*ENSVLG
Trigger: GCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCAT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp GAAAAACAGGAGTGTGGCTTTGAGAACCAGAAACATCAGCAGCAATaGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATC +
Preference number: 2 (lower is better)
Translates to: EKQECGFENQKHQQQ*LWPRFCLLATITSI
Trigger: GATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGATGACGGATTTCAGTaGACAGAAACCCAGGTTCCC +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNDDGFQ*TETQVP
Trigger: GGGAACCTGGGTTTCTGTTCACTGAAATCCGTCATC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGGCAGGAGAATTGCTTaGGCCTGGGAGGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: TKKSLASSLVDMESVLRTGRRIA*AWEAEI
Trigger: AATCTCTGCCTCCCAGGCTCAAGCAATTCTCCTGCC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGTTGAGTGCAAAAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: LFSGTADLICWALPVTSMLSAKV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAA...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCCTTCCTACCAGTCTCTaGCGACCGGTTACTGTCAGC +
Preference number: 2 (lower is better)
Translates to: TKKSLASSLVDMESVLRTLPTSL*RPVTVS
Trigger: GCTGACAGTAACCGGTCGGCAGAGACTGGTAGGAAG...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp TCTGCCAGTATTTCCTCCATCACTCCTGAGCCTGGGTGTTTCTCCTaGTCACTCACTCTATTTCACTGTCTAGACTCTCTGTGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: SASISSITPEPGCFS*SLTLFHCLDSLCLS
Trigger: TGAAAGGCACAGAGAGTCTAGACAGTGAAATAGAGTGAGTGACAAGGAGAAACACCCAGGCTCAGGAGTGATGGAGGAAATACTGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCAGCTGGAAGAGAAACTaGGATTCTGATGAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: FCLLATITSISAATDSTSSWKRN*DSDEQV
Trigger: GACTTGCTCATCAGAATCTCAGTTTCTCTTCCAGCT...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATACAGGAGTGTGGCTTTaGGAACCAGAAACATCAGCA +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNTGVWL*EPETSA
Trigger: TGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTCCTCTTGAGTTTATTTaGTGGAAAGGATGCTCATCT +
Preference number: 2 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCPLEFI*WKGCSS
Trigger: AGATGAGCATCCTTTCCAGCAAATAAACTCAAGAGG...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTACAGCAGACTTAATCTaGTGGGCACTTCCCGTCACC +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTTADLI*WALPVT
Trigger: GGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGCCTGGGCAACATGGTaGAACCTCCTCTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVAWATW*NLLSTK
Trigger: TTTGGTGGAGAGGAGGTTTCACCATGTTGCCCAGGC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGGCAGGAGAATTGCTTaGGCCTGGGAGGCAGAGATT +
Preference number: 2 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMGRRIA*AWEAEI
Trigger: AATCTCTGCCTCCCAGGCTCAAGCAATTCTCCTGCC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCCTACCTTCCTCCCACTaGCAGAATTTGGTTATAGGT +
Preference number: 2 (lower is better)
Translates to: WAWENSVLGTFPSVILDFLPSSH*QNLVIG
Trigger: ACCTATAACCAAATTCTGGCAGTGGGAGGAAGGTAG...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTGTCTAGACTCTCTGTaGCTTTCAGCCTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTCLDSL*LSALGS
Trigger: AGACCCCAAGGCTGAAAGGCACAGAGAGTCTAGACA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATGCAGACTTAATCTGCTaGGCACTTCCCGTCACCTCG +
Preference number: 2 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDADLIC*ALPVTS
Trigger: CGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGC...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGCAGACTTAATCTGCTaGGCACTTCCCGTCACCTCG +
Preference number: 2 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVADLIC*ALPVTS
Trigger: CGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp TCACTCACTCTATTTCACTGTCTAGACTCTCTGTGCCTTTCAGCCTaGGGGTCTCTTCTTGTCGGCCTTCATTTCTATTTTTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: SLTLFHCLDSLCLSA*GSLLVGLHFYFSGP
Trigger: AGGACCAGAAAAATAGAAATGAAGGCCGACAAGAAGAGACCCCAAGGCTGAAAGGCACAGAGAGTCTAGACAGTGAAATAGAGTGAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTTGAACCCAGGAGGCTaGGGTTGCAGTGAGCCGAAA +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSLNPGG*GCSEPK
Trigger: TTTCGGCTCACTGCAACCTCAGCCTCCTGGGTTCAA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGGCAGGACAATCACTTaGACCCAGGAGGCTGAGGTT +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSGRTIT*TQEAEV
Trigger: AACCTCAGCCTCCTGGGTTCAAGTGATTGTCCTGCC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGAGGCAGAGATTGCAGTaGGCCAAGATCAAGCCACTG +
Preference number: 2 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMRQRLQ*AKIKPL
Trigger: CAGTGGCTTGATCTTGGCTCACTGCAATCTCTGCCT...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTTGAGTGCAAAAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTLSAKV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCAATCCGAATTGTCTTTaGAAAGTCAAAAGGGGTCGG +
Preference number: 2 (lower is better)
Translates to: WAWENSVLGTFPSVILDFNPNCL*KVKRGR
Trigger: CCGACCCCTTTTGACTTTTCAAAGACAATTCGGATT...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGTCTCTCAGGATCTATaGCAGCCTTTCTCCATATTT +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNVSQDL*QPFSIF
Trigger: AAATATGGAGAAAGGCTGTCATAGATCCTGAGAGAC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCCTCCTCTTGCTCTTCTaGTCTCTCTATCTGCCAGTA +
Preference number: 2 (lower is better)
Translates to: TKKSLASSLVDMESVLRTLLLLF*SLYLPV
Trigger: TACTGGCAGATAGAGAGATCAGAAGAGCAAGAGGAG...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTAGAAAAACAGGAGTGTaGGCCTGTTCTCACGTCTGT +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTRKTGV*ACSHVC
Trigger: ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCTCCCACCTCTCCTCTTaGTCTTCTGATCTCTCTATC +
Preference number: 2 (lower is better)
Translates to: TKKSLASSLVDMESVLRTSHLSS*SSDLSI
Trigger: GATAGAGAGATCAGAAGAGCAAGAGGAGAGGTGGGA...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATACTTGAGTTTATTTGCTaGAAAGGATGCTCATCTGAT +
Preference number: 2 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQILEFIC*KGCSSD
Trigger: ATCAGATGAGCATCCTTTCCAGCAAATAAACTCAAG...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAATGAAAGCCTGGGCCTaGGAAAACTCTGTACTGGGC +
Preference number: 2 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLMKAWA*ENSVLG
Trigger: GCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCAT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGAAGGGGAAGGGATGTaGGTTAGCTGGAAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVEGEGM*VSWKRN
Trigger: GTTTCTCTTCCAGCTAACTCACATCCCTTCCCCTTC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGGTGGGTGGATCACTTaGGTGCAAAAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLGGWIT*VQKFET
Trigger: GGTCTCAAACTTTTGCACTCAAGTGATCCACCCACC...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTATTTCTTCCAGCTGCATaGCTCCTGCCACCCTTTACT +
Preference number: 2 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLFLPAA*LLPPFT
Trigger: AGTAAAGGGTGGCAGGAGGCATGCAGCTGGAAGAAA...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTGCAGTTTCTTCCAGCTaGATGCCTCCTGCCACCCTT +
Preference number: 2 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFAVSSS*MPPATL
Trigger: AAGGGTGGCAGGAGGCATGCAGCTGGAAGAAACTGC...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGAACATCAGCAGCAATTaGTGTGGCCCAGGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMNISSN*CGPGSV
Trigger: GACAGAACCTGGGCCACAGCAATTGCTGCTGATGTT...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTATTCCTTTATCCTCCTaGAGCCTTCTCTCACACAGT +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTIPLSS*SLLSHS
Trigger: ACTGTGTGAGAGAAGGCTGCAGGAGGATAAAGGAAT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTATGGGGGACTGTGCATaGAAGACCCTCATCTCCTTG +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSMGDCA*KTLISL
Trigger: CAAGGAGATGAGGGTCTTCCATGCACAGTCCCCCAT...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGGTGGGTGGATCACTTaGGTGCAAAAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSGGWIT*VQKFET
Trigger: GGTCTCAAACTTTTGCACTCAAGTGATCCACCCACC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTCTTTTATCAGTTCTGTaGCTTTGGTGTCTCTCAGGA +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTLLSVL*LWCLSG
Trigger: TCCTGAGAGACACCAAAGTCACAGAACTGATAAAAG...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTCAGCTGCATGCCTCCTaGCACCCTTTACTGATAGCT +
Preference number: 2 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFQLHAS*HPLLIA
Trigger: AGCTATCAGTAAAGGGTGGCAGGAGGCATGCAGCTG...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTCCAAGATCAAGCCACTaGACTCCATCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFPRSSH*TPSWAT
Trigger: TGTTGCCCAGGATGGAGTGCAGTGGCTTGATCTTGG...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTGTCCTTTGTCTTTCTaGCTGCCTCCAAGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSCPLSF*LPPSPH
Trigger: ATGGGGACTTGGAGGCAGGCAGAAAGACAAAGGACA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCCTGTCTTTAGGGTTTaGGCTGCAGCTGTTTGTCCT +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSPVFRV*AAAVCP
Trigger: AGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTAGGCGTGACCCACCATaGCCAGCCTGGATATTTAAA +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSRRDPP*PAWIFK
Trigger: TTTAAATATCCAGGCTGGGCATGGTGGGTCACGCCT...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTATGGGGGACTGTGCATaGAAGACCCTCATCTCCTTG +
Preference number: 2 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFMGDCA*KTLISL
Trigger: CAAGGAGATGAGGGTCTTCCATGCACAGTCCCCCAT...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATCTTGAGTTTATTTGCTaGAAAGGATGCTCATCTGAT +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNLEFIC*KGCSSD
Trigger: ATCAGATGAGCATCCTTTCCAGCAAATAAACTCAAG...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTATTTGCTGGAAAGGATaGTCATCTGATGACGGATTT +
Preference number: 2 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTICWKG*SSDDGF
Trigger: AAATCCGTCATCAGATGAGCATCCTTTCCAGCAAAT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATCTACCTTCCTCCCACTaGCAGAATTTGGTTATAGGT +
Preference number: 2 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDLPSSH*QNLVIG
Trigger: ACCTATAACCAAATTCTGGCAGTGGGAGGAAGGTAG...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTAACATCAGCAGCAATTaGTGTGGCCCAGGTTCTGTC +
Preference number: 2 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFNISSN*CGPGSV
Trigger: GACAGAACCTGGGCCACAGCAATTGCTGCTGATGTT...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTAGAAAAACAGGAGTGTaGGCCTGTTCTCACGTCTGT +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSRKTGV*ACSHVC
Trigger: ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCT...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATCACTATCTATACCTTTaGCTCTTGGGTTTTTATCTA +
Preference number: 2 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNHYLYL*LLGFYL
Trigger: TAGATAAAAACCCAAGAGGCAAAGGTATAGATAGTG...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCCAGGTTCTGTCTCTTaGCAACTATCACGTCCATCT +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSPGSVS*QLSRPS
Trigger: AGATGGACGTGATAGTTGCCAAGAGACAGAACCTGG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCATGTAGCTTTTCTGTaGATGGCTAAGGGTTGCCTC +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSHVAFL*MAKGCL
Trigger: GAGGCAACCCTTAGCCATCCACAGAAAAGCTACATG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGTCTAGCTGTACCTCTTaGGTTTATTTGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMSSCTS*VYLLER
Trigger: CCTTTCCAGCAAATAAACTCAAGAGGTACAGCTAGA...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR TCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTATCTAGCTGTACCTCTTaGGTTTATTTGCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLSSCTS*VYLLER
Trigger: CCTTTCCAGCAAATAAACTCAAGAGGTACAGCTAGA...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATAATTCTAGACTTCAGTaGCGTCCTAAGAAGACAAAC +
Preference number: 2 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDNSRLQ*RPKKTN
Trigger: GTTTGTCTTCTTAGGACGGCACTGAAGTCTAGAATT...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTCACACAGTCTACCTCTaGCCTTGTTCTTCCATGAAA +
Preference number: 2 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFHTVYL*PCSSMK
Trigger: TTTCATGGAAGAACAAGGGCAGAGGTAGACTGTGTG...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 90 bp TTTCTGGTCCTTTTTGTTTATAACCCTTTTATCAGTTCTGTGACTTaGGTGTCTCTCAGGATCTATGACAGCCTTTCTCCATATTTCTGC +
Preference number: 2 (lower is better)
Translates to: FLVLFVYNPFISSVT*VSLRIYDSLSPYFC
Trigger: GCAGAAATATGGAGAAAGGCTGTCATAGATCCTGAGAGACACCAAAGTCACAGAACTGATAAAAGGGTTATAAACAAAAAGGACCAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTATTTGCTGGAAAGGATaGTCATCTGATGACGGATTT +
Preference number: 2 (lower is better)
Translates to: RCIFILCACFYDSMMETSICWKG*SSDDGF
Trigger: AAATCCGTCATCAGATGAGCATCCTTTCCAGCAAAT...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 72 bp GCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCATaGAAGACCCTCATCTCCTTGTCCTGGCCCCACCTC +
Preference number: 3 (lower is better)
Translates to: ASLALTLMGDCA*KTLISLSWPHL
Trigger: GAGGTGGGGCCAGGACAAGGAGATGAGGGTCTTCCATGCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCTTGCGCTGCAGCTGTTaGTCCTTTGTCTTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: SPASASSVAGITGACHHALRCSC*SFVFLP
Trigger: AGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAA...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp TCCTGGTCTCTTCTGTCAGTGAATCTTCCCACTGACTaGCTCCTCCGCCTTCTGCTTCTCAGCTCCCCGGAC +
Preference number: 3 (lower is better)
Translates to: SWSLLSVNLPTD*LLRLLLLSSPD
Trigger: GTCCGGGGAGCTGAGAAGCAGAAGGCGGAGGAGGCAGTCAGTGGGAAGATTCACTGACAGAAGAGACCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 72 bp GTCTTGAGGACCATTTCCCTGGGCCACGGTAAAGTCTaGCGAAGCACCACTGTGCTAAGCAGACTCCTACCA +
Preference number: 3 (lower is better)
Translates to: VLRTISLGHGKV*RSTTVLSRLLP
Trigger: TGGTAGGAGTCTGCTTAGCACAGTGGTGCTTCGCCAGACTTTACCGTGGCCCAGGGAAATGGTCCTCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCTTGAGTGCAAAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: VWSQILPSVHYILPHLGALECKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAAG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp CTGCCGACCGGTTACTGTCAGCCTGTCTTTAGGGTTTaGGCTGCAGCTGTTTGTCCTTTGTCTTTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: LPTGYCQPVFRV*AAAVCPLSFCL
Trigger: CAGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGGCTGACAGTAACCGGTCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCCTTGGGGTCTCTTCTaGTCGGCCTTCATTTCTATT +
Preference number: 3 (lower is better)
Translates to: VWSQILPSVHYILPHLGAPWGLF*SAFISI
Trigger: AATAGAAATGAAGGCCGACAAGAAGAGACCCCAAGG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGCCCAGGTTCTGTCTCTaGGCAACTATCACGTCCATC +
Preference number: 3 (lower is better)
Translates to: LFSGTADLICWALPVTSMPRFCL*ATITSI
Trigger: GATGGACGTGATAGTTGCCAAGAGACAGAACCTGGG...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 72 bp GGCTTTGAGAACCAGAAACATCAGCAGCAATTGCTGTaGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCC +
Preference number: 3 (lower is better)
Translates to: GFENQKHQQQLL*PRFCLLATITS
Trigger: GGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTTCTCAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR TCA 72 bp CGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTCTTCTaGTCTCTCTATCTGCCAGTATTTCCTCCATCACTC +
Preference number: 3 (lower is better)
Translates to: RSSLFPPLLLLF*SLYLPVFPPSL
Trigger: GAGTGATGGAGGAAATACTGGCAGATAGAGAGATCAGAAGAGCAAGAGGAGAGGTGGGAACAGAGAAGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp CTCAGTCCATTGTTTAGTGGAACAGCAGACTTAATCTaGTGGGCACTTCCCGTCACCTCGATGTTCTGGGAA +
Preference number: 3 (lower is better)
Translates to: LSPLFSGTADLI*WALPVTSMFWE
Trigger: TTCCCAGAACATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAATGGACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp GCCTTTCTCCATATTTCTGCTAGGGCCTGTCTCTTTTaGCCTCCATCCTTCTTTGCCTCTGTCACCTCTATG +
Preference number: 3 (lower is better)
Translates to: AFLHISARACLF*PPSFFASVTSM
Trigger: CATAGAGGTGACAGAGGCAAAGAAGGATGGAGGGCAAAAGAGACAGGCCCTAGCAGAAATATGGAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 72 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTaGCAACTATCACGTCCATCTCTGCTGCTACAGATA +
Preference number: 3 (lower is better)
Translates to: ISSNCCGPGSVS*QLSRPSLLLQI
Trigger: TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 72 bp AGTCCATTGTTTAGTGGAACAGCAGACTTAATCTGCTaGGCACTTCCCGTCACCTCGATGTTCTGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: SPLFSGTADLIC*ALPVTSMFWEG
Trigger: TCCTTCCCAGAACATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAATGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp AGTGTGGCTTTGAGAACCAGAAACATCAGCAGCAATTaGTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCA +
Preference number: 3 (lower is better)
Translates to: SVALRTRNISSN*CGPGSVSWQLS
Trigger: TGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTTCTCAAAGCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp CTGATTCTGACTTGTCCTTATCTTCCTACCAGTCTCTaGCGACCGGTTACTGTCAGCCTGTCTTTAGGGTTT +
Preference number: 3 (lower is better)
Translates to: LILTCPYLPTSL*RPVTVSLSLGF
Trigger: AAACCCTAAAGACAGGCTGACAGTAACCGGTCGGCAGAGACTGGTAGGAAGATAAGGACAAGTCAGAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CCA 72 bp AAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTaGTCCCAAATTCTTCCAAGCGTCCACTACATCCTG +
Preference number: 3 (lower is better)
Translates to: KFHWLTMVAIRV*SQILPSVHYIL
Trigger: CAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCTCCCACTGCCAGAATTaGGTTATAGGTGAGATCTCT +
Preference number: 3 (lower is better)
Translates to: WAWENSVLGTFPSVILDFSHCQN*VIGEIS
Trigger: AGAGATCTCACCTATAACCAAATTCTGGCAGTGGGA...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR GCA 72 bp ACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCAGTaGCGTCCTAAGAAGACAAACCAGCCCTGTGTTCAT +
Preference number: 3 (lower is better)
Translates to: TGHLSFCNSRLQ*RPKKTNQPCVH
Trigger: ATGAACACAGGGCTGGTTTGTCTTCTTAGGACGGCACTGAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGCCCAGGTTCTGTCTCTaGGCAACTATCACGTCCATC +
Preference number: 3 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMPRFCL*ATITSI
Trigger: GATGGACGTGATAGTTGCCAAGAGACAGAACCTGGG...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATATATTTGCATCTCAGTaGACACCCCTGATTCTGACT +
Preference number: 3 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNIFASQ*TPLILT
Trigger: AGTCAGAATCAGGGGTGTCAACTGAGATGCAAATAT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATGCCTCTCTCAGTCCATaGTTTAGTGGAACAGCAGAC +
Preference number: 3 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDASLSP*FSGTAD
Trigger: GTCTGCTGTTCCACTAAACAATGGACTGAGAGAGGC...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGCAGCTGTTTGTCCTTaGTCTTTCTGCCTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: RCIFILCACFYDSMMETSAAVCP*SFCLPP
Trigger: TGGAGGCAGGCAGAAAGACAAAGGACAAACAGCTGC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGAACAGGAGTGTGGCTTaGAGAACCAGAAACATCAGC +
Preference number: 3 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMNRSVA*RTRNIS
Trigger: GCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGTT...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTCTTTGTCAGCTCCTTaGCCTATATTTGCATCTCAG +
Preference number: 3 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTSLSAP*PIFASQ
Trigger: CTGAGATGCAAATATAGGCAAAGGAGCTGACAAAGA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR-3UTR CAA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGCTCTTATTTTCTGCTaGTGTTTAGCTCCTTCCAAC +
Preference number: 3 (lower is better)
Translates to: TKKSLASSLVDMESVLRTALIFC*CLAPSN
Trigger: GTTGGAAGGAGCTAAACACAAGCAGAAAATAAGAGC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR TCA 72 bp GTCTCGATGTATTTTCATCCTTTGCGCCTGTTTTTATaGCTCTATGATGGAGACTTCTCACAATCCCTCTCA +
Preference number: 3 (lower is better)
Translates to: VSMYFHPLRLFL*LYDGDFSQSLS
Trigger: TGAGAGGGATTGTGAGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCAGAGCCCAGCGCGGGTaGCCATGGATGGGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHARAQRG*PWMGSA
Trigger: CGCCGACCCCATCCATGGCCACCCGCGCTGGGCTCT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCACAGGCGTGAGCTGCTaGGCCCAGCCAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHATGVSC*AQPEGQ
Trigger: CTGGCCCTCTGGCTGGGCGCAGCAGCTCACGCCTGT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCGCGGGTGGCCATGGATaGGGTCGGCGGCCATCTGAG +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHAAGGHG*GRRPSE
Trigger: CTCAGATGGCCGCCGACCCCATCCATGGCCACCCGC...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCGGGATTACGGGCGCCTaGCACCACGCCCGGCCAATT +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHAGITGA*HHARPI
Trigger: AATTGGCCGGGCGTGGTGGCAGGCGCCCGTAATCCC...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCACGACCTCGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHATTSAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGGTCGT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTGGAAGAGGGCCAAGGTaGCCAAGGAGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAGRGPR*PRRPSW
Trigger: CCAGCTGGGCCTCCTTGGCCACCTTGGCCCTCTTCC...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCAGCGCGGGTGGCCATaGATGGGGTCGGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGAQRGWP*MGSAAI
Trigger: GATGGCCGCCGACCCCATCCATGGCCACCCGCGCTG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTTCTCATGGCCAGGGCTaGGTGGATGGGGTCGAGACT +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLASHGQG*VDGVET
Trigger: AGTCTCGACCCCATCCACCCAGCCCTGGCCATGAGA...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTACATGGAGTCCGTCTTaGGGACCATTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLATWSPS*GPFPWA
Trigger: GGCCCAGGGAAATGGTCCTCAAGACGGACTCCATGT...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCAACATCAGCAGCAATTaGTGTGGCCCAGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHANISSN*CGPGSV
Trigger: GACAGAACCTGGGCCACAGCAATTGCTGCTGATGTT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCCACTGCATTCCAGCCTaGGCAGCAAGAATGAAACTG +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHAHCIPA*AARMKL
Trigger: CAGTTTCATTCTTGCTGCCCAGGCTGGAATGCAGTG...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTTCCCCGCCGCGCCTTTaGGATCAGCAGGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLASPPRL*DQQELF
Trigger: GAAAAGTTCCTGCTGATCCCAAAGGCGCGGCGGGGA...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611774.2
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCCCCAGCCAGCAAACATaGCTTCTAGAAGTACAGACT +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHAPSQQT*LLEVQT
Trigger: AGTCTGTACTTCTAGAAGTCATGTTTGCTGGCTGGG...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGCGCCGCAACCCCCAGTaGAGCCCCCGGAACGCGAGG +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMRRNPQ*SPRNAR
Trigger: CCTCGCGTTCCGGGGGCTGCACTGGGGGTTGCGGCG...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGCGCCGCAACCCCCAGTaGAGCCCCCGGAACGCGAGG +
Preference number: 4 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCERRNPQ*SPRNAR
Trigger: CCTCGCGTTCCGGGGGCTGCACTGGGGGTTGCGGCG...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAAGAGCCCAGCGCGGGTaGCCATGGATGGGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIRAQRG*PWMGSA
Trigger: CGCCGACCCCATCCATGGCCACCCGCGCTGGGCTCT...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTGGCCACGGTAAAGTCTaGCGAAGCACCACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAGHGKV*RSTTVL
Trigger: TAGCACAGTGGTGCTTCGCCAGACTTTACCGTGGCC...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAGGGTCGGCGGCCATCTaGGGGTACAGTGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPGSAAI*GYSDRP
Trigger: CGGCCTGTCACTGTACCCTCAGATGGCCGCCGACCC...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTAGGCAGAGATTGCAGTaGGCCAAGATCAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLARQRLQ*AKIKPL
Trigger: CAGTGGCTTGATCTTGGCTCACTGCAATCTCTGCCT...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATACAGAGGTTCCACCACTaGCAGCGGTCCCGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIQRFHH*QRSRAA
Trigger: GGCCGCTCGGGACCGCTGGCAGTGGTGGAACCTCTG...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTACGACCTCGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGATTSAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGGTCGT...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCGCCTCCTCCGCCTTCTaGTTCTCAGCTCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCASSAF*FSAPRT
Trigger: AGTCCGGGGAGCTGAGAAGCAGAAGGCGGAGGAGGC...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCGCGTCCACTACATCCTaGCCCACCTGGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCASTTS*PTWELT
Trigger: GGTCAGCTCCCAGGTGGGGCAGGATGTAGTGGACGC...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCTCTCGGCCGGGACTaGGAACCCGTTTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIALGRD*EPVSRQ
Trigger: CTGCCGGGAAACGGGTTCCCAGTCCCGGCCGAGAGC...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGCAGCGCGGGTGGCCATaGATGGGGTCGGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMQRGWP*MGSAAI
Trigger: GATGGCCGCCGACCCCATCCATGGCCACCCGCGCTG...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTGATGACGGATTTCAGTaGACAGAAACCCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLADDGFQ*TETQVP
Trigger: GGGAACCTGGGTTTCTGTTCACTGAAATCCGTCATC...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCTCACTCAAACCATCATaGATGTATACCAGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SPASASSVAGITGACHHASLKPS*MYTSGQ
Trigger: TTGGCCACTGGTATACATTCATGATGGTTTGAGTGA...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTGCCTCCTCCGCCTTCTaGTTCTCAGCTCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCASSAF*FSAPRT
Trigger: AGTCCGGGGAGCTGAGAAGCAGAAGGCGGAGGAGGC...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCACGATCTTGGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCTILAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCGT...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATCCATGGCCTGGCGGTTaGGGGGTTGCGGGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNPWPGG*GVAGSP
Trigger: CGGACTCCCCGCAACCCCCCAACCGCCAGGCCATGG...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTGGCAGGAGAATCACTTaGGTCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGAGRRIT*VQEVEV
Trigger: AACCTCCACCTCCTGGACTCAAGTGATTCTCCTGCC...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTGGAACCTGGTGGTGCTaGCGGAACAGCCACAGACTC +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCGTWWC*RNSHRL
Trigger: GAGTCTGTGGCTGTTCCGGCAGCACCACCAGGTTCC...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTACGATCTTGGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCTILAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATCGT...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTCATGTAGCTTTTCTGTaGATGGCTAAGGGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAHVAFL*MAKGCL
Trigger: GAGGCAACCCTTAGCCATCCACAGAAAAGCTACATG...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGCCCAGTCCCTCGCCTaGGCGGTGATTGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNAQSLA*AVIGAA
Trigger: GGCTGCTCCAATCACCGCCCAGGCGAGGGACTGGGC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611774.2
CDS-3UTR TCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCTTGAACCCAGGAGGCTaGGGTTGCAGTGAGCCGAAA +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCLNPGG*GCSEPK
Trigger: TTTCGGCTCACTGCAACCTCAGCCTCCTGGGTTCAA...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCAGCTGCATGCCTCCTaGCACCCTTTACTGATAGCT +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGAQLHAS*HPLLIA
Trigger: AGCTATCAGTAAAGGGTGGCAGGAGGCATGCAGCTG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTCACACAGTCTACCTCTaGCCTTGTTCTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAHTVYL*PCSSMK
Trigger: TTTCATGGAAGAACAAGGGCAGAGGTAGACTGTGTG...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGTTGCCCAGGCTGGAGTaGAGTGGCACGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMLPRLE*SGTTSA
Trigger: AGCCGAGGTCGTGCCACTGCACTCCAGCCTGGGCAA...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCCCCAGCTGGTCACGCTaGAGGCCAGGGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTPSWSR*RPGMGP
Trigger: AGGCCCCATCCCTGGCCTTCAGCGTGACCAGCTGGG...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAAGAGGAACCTGGTGGTaGTGCCGGAACAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPRGTWW*CRNSHR
Trigger: TCTGTGGCTGTTCCGGCAGCACCACCAGGTTCCTCT...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTTTTCTTCCAGCTGCATaGCTCCTGCCACCCTTTACT +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGAFLPAA*LLPPFT
Trigger: AGTAAAGGGTGGCAGGAGGCATGCAGCTGGAAGAAA...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTTGTCTAGACTCTCTGTaGCTTTCAGCCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGACLDSL*LSALGS
Trigger: AGACCCCAAGGCTGAAAGGCACAGAGAGTCTAGACA...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCGCCAGGGATGGGGCCTaGCGAGAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFARDGA*RESNSS
Trigger: GCTGCTGTTGCTTTCTCGCCAGGCCCCATCCCTGGC...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCGCTGAAGGCCAGGGATaGGGCCTGGCGAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSAEGQG*GLARKQ
Trigger: TTGCTTTCTCGCCAGGCCCCATCCCTGGCCTTCAGC...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCGTGTCCTGGTCCCCCTaGTTTTCTCATGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSVSWSP*FSHGQG
Trigger: GCCCTGGCCATGAGAAAACCAGGGGGACCAGGACAC...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTTTCCTCAAGTTTCACTaGCTCACCATGGTAGCAATT +
Preference number: 4 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAFLKFH*LTMVAI
Trigger: AATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAA...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGGCAGGACAATCACTTaGACCCAGGAGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIGRTIT*TQEAEV
Trigger: AACCTCAGCCTCCTGGGTTCAAGTGATTGTCCTGCC...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTTCCCACCTCTCCTCTTaGTCTTCTGATCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGASHLSS*SSDLSI
Trigger: GATAGAGAGATCAGAAGAGCAAGAGGAGAGGTGGGA...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGCCATGGCCTGGCGGTTaGGGGGTTGCGGGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMPWPGG*GVAGSP
Trigger: CGGACTCCCCGCAACCCCCCAACCGCCAGGCCATGG...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTATGGGGGACTGTGCATaGAAGACCCTCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCMGDCA*KTLISL
Trigger: CAAGGAGATGAGGGTCTTCCATGCACAGTCCCCCAT...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 72 bp CCTGTCTTTAGGGTTTGCGCTGCAGCTGTTTGTCCTTaGTCTTTCTGCCTGCCTCCAAGTCCCCATATCTCC +
Preference number: 4 (lower is better)
Translates to: PVFRVCAAAVCP*SFCLPPSPHIS
Trigger: GGAGATATGGGGACTTGGAGGCAGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGCCCAGCTGGTCACGCTaGAGGCCAGGGATGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMPSWSR*RPGMGP
Trigger: AGGCCCCATCCCTGGCCTTCAGCGTGACCAGCTGGG...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCCAATTCCACCCAGGGTaGCCAGAGCAAGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSQFHPG*PEQEEP
Trigger: AGGTTCCTCTTGCTCTGGTCACCCTGGGTGGAATTG...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTGATGACGGATTTCAGTaGACAGAAACCCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCDDGFQ*TETQVP
Trigger: GGGAACCTGGGTTTCTGTTCACTGAAATCCGTCATC...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCGGCAGGTGGATTACTTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSGRWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAAGTAATCCACCTGCC...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAAGGCAGAGATTGCAGTaGGCCAAGATCAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPRQRLQ*AKIKPL
Trigger: CAGTGGCTTGATCTTGGCTCACTGCAATCTCTGCCT...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCGGCAGGAGAATTGCTTaGGCCTGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSGRRIA*AWEAEI
Trigger: AATCTCTGCCTCCCAGGCTCAAGCAATTCTCCTGCC...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCTTGAGTGCAAAAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCLSAKV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAA...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTACAGAGGTTCCACCACTaGCAGCGGTCCCGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLQRFHH*QRSRAA
Trigger: GGCCGCTCGGGACCGCTGGCAGTGGTGGAACCTCTG...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAGAAGATCCCAGGTCTTaGCCAAGGTCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPEDPRS*PRSGST
Trigger: TGTGGAACCAGACCTTGGGCAAGACCTGGGATCTTC...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCCCTGATGGGGGACTGTaGATGGAAGACCCTCATCTC +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSPDGGL*MEDPHL
Trigger: GAGATGAGGGTCTTCCATGCACAGTCCCCCATCAGG...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGGCAGTTTCTTCCAGCTaGATGCCTCCTGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCEAVSSS*MPPATL
Trigger: AAGGGTGGCAGGAGGCATGCAGCTGGAAGAAACTGC...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAACAGCAGACTTAATCTaGTGGGCACTTCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQITADLI*WALPVT
Trigger: GGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGT...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGCGTCCACTACATCCTaGCCCACCTGGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTASTTS*PTWELT
Trigger: GGTCAGCTCCCAGGTGGGGCAGGATGTAGTGGACGC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCTCTCGGCCGGGACTaGGAACCCGTTTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLALGRD*EPVSRQ
Trigger: CTGCCGGGAAACGGGTTCCCAGTCCCGGCCGAGAGC...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTCCACCAGGAGCCCCGTaGGCGCCATGGCCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFPPGAP*APWPGG
Trigger: ACCGCCAGGCCATGGCGCCCACGGGGCTCCTGGTGG...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGCGGGTGGCCATGGATaGGGTCGGCGGCCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVAGGHG*GRRPSE
Trigger: CTCAGATGGCCGCCGACCCCATCCATGGCCACCCGC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGCCAGGGATGGGGCCTaGCGAGAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTARDGA*RESNSS
Trigger: GCTGCTGTTGCTTTCTCGCCAGGCCCCATCCCTGGC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAATGGGGGACTGTGCATaGAAGACCCTCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPMGDCA*KTLISL
Trigger: CAAGGAGATGAGGGTCTTCCATGCACAGTCCCCCAT...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTCACTGCATTCCAGCCTaGGCAGCAAGAATGAAACTG +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCHCIPA*AARMKL
Trigger: CAGTTTCATTCTTGCTGCCCAGGCTGGAATGCAGTG...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCAGCTGGAAGAGAAACTaGGATTCTGATGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCSWKRN*DSDEQV
Trigger: GACTTGCTCATCAGAATCTCAGTTTCTCTTCCAGCT...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTCTCCTCTTGCTCTTCTaGTCTCTCTATCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCLLLLF*SLYLPV
Trigger: TACTGGCAGATAGAGAGATCAGAAGAGCAAGAGGAG...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCGGCAGGAGAATCACTTaGGTCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFGRRIT*VQEVEV
Trigger: AACCTCCACCTCCTGGACTCAAGTGATTCTCCTGCC...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAAACATCAGCAGCAATTaGTGTGGCCCAGGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPNISSN*CGPGSV
Trigger: GACAGAACCTGGGCCACAGCAATTGCTGCTGATGTT...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCGGGCTTGGTGGTGCATaGCTGAAGTCACAGCTACTC +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFGLGGA*LKSQLL
Trigger: GAGTAGCTGTGACTTCAGGCATGCACCACCAAGCCC...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCATTCCTTTATCCTCCTaGAGCCTTCTCTCACACAGT +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCIPLSS*SLLSHS
Trigger: ACTGTGTGAGAGAAGGCTGCAGGAGGATAAAGGAAT...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTACAGGCGTGAGCTGCTaGGCCCAGCCAGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSTGVSC*AQPEGQ
Trigger: CTGGCCCTCTGGCTGGGCGCAGCAGCTCACGCCTGT...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTTGGATGGCTAAGGGTTaGCTCTCTCAGTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCWMAKG*LSQSIV
Trigger: AACAATGGACTGAGAGAGGCAACCCTTAGCCATCCA...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGAGGGCCTGTCTCTTTTaGCCTCCATCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMRACLF*PPSFFA
Trigger: GGCAAAGAAGGATGGAGGGCAAAAGAGACAGGCCCT...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCACCTGTCTTTAGGGTTTaGGCTGCAGCTGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPPVFRV*AAAVCP
Trigger: AGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGG...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCAAGGCGTGACCCACCATaGCCAGCCTGGATATTTAAA +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPRRDPP*PAWIFK
Trigger: TTTAAATATCCAGGCTGGGCATGGTGGGTCACGCCT...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGCTGAAGGCCAGGGATaGGGCCTGGCGAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTAEGQG*GLARKQ
Trigger: TTGCTTTCTCGCCAGGCCCCATCCCTGGCCTTCAGC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGGAAGAGGGCCAAGGTaGCCAAGGAGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVGRGPR*PRRPSW
Trigger: CCAGCTGGGCCTCCTTGGCCACCTTGGCCCTCTTCC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTGTGTCCTGGTCCCCCTaGTTTTCTCATGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTVSWSP*FSHGQG
Trigger: GCCCTGGCCATGAGAAAACCAGGGGGACCAGGACAC...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 72 bp TCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTaGAGGACCATTTCCCTGGGCCACGGTAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLASSLVDMESV*RTISLGHGKVW
Trigger: CCAGACTTTACCGTGGCCCAGGGAAATGGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTGGGTCGGCGGCCATCTaGGGGTACAGTGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFGSAAI*GYSDRP
Trigger: CGGCCTGTCACTGTACCCTCAGATGGCCGCCGACCC...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCTCTAGTCTTTCAGGCTaGGAGTCGAACTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSSSLSG*ESNCCW
Trigger: CCAGCAACAGTTCGACTCTCAGCCTGAAAGACTAGA...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGTCTGGCCCTCACCCTaGTGGGGGACTGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVVWPSP*WGTVHG
Trigger: TCCATGCACAGTCCCCCATCAGGGTGAGGGCCAGAC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATGTCTGGCCCTCACCCTaGTGGGGGACTGTGCATGGA +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDVWPSP*WGTVHG
Trigger: TCCATGCACAGTCCCCCATCAGGGTGAGGGCCAGAC...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGGAAGGGGAAGGGATGTaGGTTAGCTGGAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCEEGEGM*VSWKRN
Trigger: GTTTCTCTTCCAGCTAACTCACATCCCTTCCCCTTC...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTAGAGGAACCTGGTGGTaGTGCCGGAACAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTRGTWW*CRNSHR
Trigger: TCTGTGGCTGTTCCGGCAGCACCACCAGGTTCCTCT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGGGCTTGGTGGTGCATaGCTGAAGTCACAGCTACTC +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCGLGGA*LKSQLL
Trigger: GAGTAGCTGTGACTTCAGGCATGCACCACCAAGCCC...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTATTGCCCAGGCTGGAGTaGAGTGGCACGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLLPRLE*SGTTSA
Trigger: AGCCGAGGTCGTGCCACTGCACTCCAGCCTGGGCAA...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATAATCTTCCCACTGACTaGCTCCTCCGCCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNNLPTD*LLRLLL
Trigger: AAGCAGAAGGCGGAGGAGGCAGTCAGTGGGAAGATT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGCCTGTCTTTAGGGTTTaGGCTGCAGCTGTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCEPVFRV*AAAVCP
Trigger: AGGACAAACAGCTGCAGCGCAAACCCTAAAGACAGG...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGAGGCGTGACCCACCATaGCCAGCCTGGATATTTAAA +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMRRDPP*PAWIFK
Trigger: TTTAAATATCCAGGCTGGGCATGGTGGGTCACGCCT...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGGGATTACGGGCGCCTaGCACCACGCCCGGCCAATT +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSGITGA*HHARPI
Trigger: AATTGGCCGGGCGTGGTGGCAGGCGCCCGTAATCCC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGTTCAAACGATTCTCCTaGCTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCEFKRFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCAGGAGAATCGTTTGAA...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTTCTGCTCTTATTTTCTaGTTGTGTTTAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGASALIF*LCLAPS
Trigger: GGAAGGAGCTAAACACAAGCAGAAAATAAGAGCAGA...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGGAGCAGAGACACCATaGAGAAGCCCACGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTGAETP*RSPRSG
Trigger: GCCACTACGTGGGCTTCTCCATGGTGTCTCTGCTCC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCAGAGCAAGAGGAACCTaGTGGTGCTGCCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTRARGT*WCCRNS
Trigger: GCTGTTCCGGCAGCACCACCAGGTTCCTCTTGCTCT...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATTGTCACGACGTGTCCTaGTCCCCCTGGTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNCHDVS*SPWFSH
Trigger: ATGAGAAAACCAGGGGGACCAGGACACGTCGTGACA...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTAAAATTAGCCGAGTGTaGTGGTGGGTACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCKISRV*WWVPVI
Trigger: GATTACAGGTACCCACCACCACACTCGGCTAATTTT...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATACAGACTCCTACCAAATaGAGCATCTGGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIQTPTK*SIWQSL
Trigger: CAGAGATTGCCAGATGCTCCATTTGGTAGGAGTCTG...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 72 bp GAGTGTGGCTTTGAGAACCAGAAACATCAGCAGCAATaGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATC +
Preference number: 4 (lower is better)
Translates to: ECGFENQKHQQQ*LWPRFCLLATI
Trigger: GATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTTCTGGTTCTCAAAGCCACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCACTGTAGGACATCATTaGCCAGAATACGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSTVGHH*PEYGSP
Trigger: TGGGGATCCGTATTCTGGTCAATGATGTCCTACAGT...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGACAGGAGTGTGGCTTTaGGAACCAGAAACATCAGCA +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMTGVWL*EPETSA
Trigger: TGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGT...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGCCTGGGCAACATGGTaGAACCTCCTCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTAWATW*NLLSTK
Trigger: TTTGGTGGAGAGGAGGTTTCACCATGTTGCCCAGGC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCTCTGTCACCTCTATGTaGATAATCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCSVTSM*IILLSF
Trigger: GAAAGAGAGAAGGATTATTCACATAGAGGTGACAGA...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGCCCCACCTGGGAGCTaGCCTCACTCTTCCTGTATG +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMAPPGS*PHSSCM
Trigger: CATACAGGAAGAGTGAGGTCAGCTCCCAGGTGGGGC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGGAACCTGGTGGTGCTaGCGGAACAGCCACAGACTC +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVGTWWC*RNSHRL
Trigger: GAGTCTGTGGCTGTTCCGGCAGCACCACCAGGTTCC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCTGTCCTTTGTCTTTCTaGCTGCCTCCAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFCPLSF*LPPSPH
Trigger: ATGGGGACTTGGAGGCAGGCAGAAAGACAAAGGACA...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTCTCATGGCCAGGGCTaGGTGGATGGGGTCGAGACT +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVSHGQG*VDGVET
Trigger: AGTCTCGACCCCATCCACCCAGCCCTGGCCATGAGA...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTGCAGACTTAATCTGCTaGGCACTTCCCGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTADLIC*ALPVTS
Trigger: CGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGC...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCTGTGCCTTTCAGCCTTaGGGTCTCTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTCAFQP*GLFLSA
Trigger: GGCCGACAAGAAGAGACCCCAAGGCTGAAAGGCACA...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCCCTGCTGGACTGCAGTaGCACTATCTCGGCTCATTA +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCPAGLQ*HYLGSL
Trigger: TAATGAGCCGAGATAGTGCCACTGCAGTCCAGCAGG...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTATGAATGTATACCAGTaGCCAAAGAAAAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: VWSQILPSVHYILPHLGAMNVYQ*PKKRCM
Trigger: CATACACCTTTTCTTTGGCCACTGGTATACATTCAT...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGGCCCCTTCCCTGTCCTaGAGGACAAAGAAATCATTA +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMAPSLS*RTKKSL
Trigger: TAATGATTTCTTTGTCCTCCAGGACAGGGAAGGGGC...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 72 bp TTCTGTGGATGGCTAAGGGTTGCCTCTCTCAGTCCATaGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FCGWLRVASLSP*FSGTADLICWA
Trigger: TGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAATGGACTGAGAGAGGCAACCCTTAGCCATCCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATATTGCGCCTGTTTTTATaGCTCTATGATGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQILRLFL*LYDGDF
Trigger: GAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAA...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAACATGGAGTCCGTCTTaGGGACCATTTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLTWSPS*GPFPWA
Trigger: GGCCCAGGGAAATGGTCCTCAAGACGGACTCCATGT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTATTTGCTGGAAAGGATaGTCATCTGATGACGGATTT +
Preference number: 4 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCICWKG*SSDDGF
Trigger: AAATCCGTCATCAGATGAGCATCCTTTCCAGCAAAT...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCCTACCTTCCTCCCACTaGCAGAATTTGGTTATAGGT +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSLPSSH*QNLVIG
Trigger: ACCTATAACCAAATTCTGGCAGTGGGAGGAAGGTAG...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGCTACCTTCCTCCCACTaGCAGAATTTGGTTATAGGT +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMLPSSH*QNLVIG
Trigger: ACCTATAACCAAATTCTGGCAGTGGGAGGAAGGTAG...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATAGAAAAACAGGAGTGTaGGCCTGTTCTCACGTCTGT +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNRKTGV*ACSHVC
Trigger: ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCATCACAATCCAGTCCTaGCTTCCTCAAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSITIQS*LPQVSL
Trigger: CAGTGAAACTTGAGGAAGGCAGGACTGGATTGTGAT...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGGAGCAGAGACACCATaGAGAAGCCCACGTAGTGGC +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMGAETP*RSPRSG
Trigger: GCCACTACGTGGGCTTCTCCATGGTGTCTCTGCTCC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAAGAGCAAGAGGAACCTaGTGGTGCTGCCGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLRARGT*WCCRNS
Trigger: GCTGTTCCGGCAGCACCACCAGGTTCCTCTTGCTCT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCTCCCCCATCTGTCCCTaGGTTAAAGCAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCSPICP*VKAKSF
Trigger: GAAGCTCTTTGCTTTAACCCAGGGACAGATGGGGGA...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCATGAAAGCCTGGGCCTaGGAAAACTCTGTACTGGGC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTMKAWA*ENSVLG
Trigger: GCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCAT...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGGTAGCAATTCGTGTGTaGTCCCAAATTCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMVAIRV*SQILPS
Trigger: GCTTGGAAGAATTTGGGACCACACACGAATTGCTAC...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGCCCCTTCCCTGTCCTaGAGGACAAAGAAATCATTA +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNAPSLS*RTKKSL
Trigger: TAATGATTTCTTTGTCCTCCAGGACAGGGAAGGGGC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTCTAGTCTTTCAGGCTaGGAGTCGAACTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTSSLSG*ESNCCW
Trigger: CCAGCAACAGTTCGACTCTCAGCCTGAAAGACTAGA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGTTGAACCCAGGAGGCTaGGGTTGCAGTGAGCCGAAA +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMLNPGG*GCSEPK
Trigger: TTTCGGCTCACTGCAACCTCAGCCTCCTGGGTTCAA...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTGGTGGGTGGATCACTTaGGTGCAAAAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTGGWIT*VQKFET
Trigger: GGTCTCAAACTTTTGCACTCAAGTGATCCACCCACC...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGGTGGGTGGATCACTTaGGTGCAAAAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTGGWIT*VQKFET
Trigger: GGTCTCAAACTTTTGCACTCAAGTGATCCACCCACC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCGTCTCTCAGGATCTATaGCAGCCTTTCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSVSQDL*QPFSIF
Trigger: AAATATGGAGAAAGGCTGTCATAGATCCTGAGAGAC...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGCTTTTATCAGTTCTGTaGCTTTGGTGTCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCELLSVL*LWCLSG
Trigger: TCCTGAGAGACACCAAAGTCACAGAACTGATAAAAG...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCTTGCGCCTGTTTTTATaGCTCTATGATGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSLRLFL*LYDGDF
Trigger: GAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAA...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGCCTGGCCAATATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNAWPIW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATATTGGCCAGGC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCCTTCCTGTATGGGCTTaGCTAGTTAATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSLPVWA*LVNPQK
Trigger: TTTCTGTGGATTAACTAGTCAAGCCCATACAGGAAG...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATAGCAGCTTCCGCAGGTaGAAGCAGGCAGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDSSFRR*KQAEFS
Trigger: ACTGAACTCTGCCTGCTTGCACCTGCGGAAGCTGCT...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGAGCAGCTTCCGCAGGTaGAAGCAGGCAGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMSSFRR*KQAEFS
Trigger: ACTGAACTCTGCCTGCTTGCACCTGCGGAAGCTGCT...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATACCTCTTGAGTTTATTTaGTGGAAAGGATGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GPGSVSWQLSRPSLLLQIPLEFI*WKGCSS
Trigger: AGATGAGCATCCTTTCCAGCAAATAAACTCAAGAGG...TATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCACCTCTTGAGTTTATTTaGTGGAAAGGATGCTCATCT +
Preference number: 4 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPPLEFI*WKGCSS
Trigger: AGATGAGCATCCTTTCCAGCAAATAAACTCAAGAGG...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCTTTCTTCCAGCTGCATaGCTCCTGCCACCCTTTACT +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTFLPAA*LLPPFT
Trigger: AGTAAAGGGTGGCAGGAGGCATGCAGCTGGAAGAAA...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGCAGTTTCTTCCAGCTaGATGCCTCCTGCCACCCTT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMAVSSS*MPPATL
Trigger: AAGGGTGGCAGGAGGCATGCAGCTGGAAGAAACTGC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATCACACAGTCTACCTCTaGCCTTGTTCTTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNHTVYL*PCSSMK
Trigger: TTTCATGGAAGAACAAGGGCAGAGGTAGACTGTGTG...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGTCATTTCTGGGTTCCTaGCTCTTCTTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMSFLGS*LFFVLW
Trigger: CCAAAGAACAAAGAAGAGGCAGGAACCCAGAAATGA...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCTCGGTCCCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSLGPPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGGGACCGAG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGTCTTGCCCAAGGTCTaGTTCCACAGCAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVVLPKV*FHSRSA
Trigger: AGCTGACCTGCTGTGGAACCAGACCTTGGGCAAGAC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGTCTTGCCCAAGGTCTaGTTCCACAGCAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMVLPKV*FHSRSA
Trigger: AGCTGACCTGCTGTGGAACCAGACCTTGGGCAAGAC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTACCAGCGAGGGGCCCATaGCTTCTCTCTAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLPARGP*LLSSLS
Trigger: TGAAAGACTAGAGAGAAGCCATGGGCCCCTCGCTGG...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCTCTTCCATGAAAGCCTaGGCCTGGGAAAACTCTGTA +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCSSMKA*AWENSV
Trigger: TACAGAGTTTTCCCAGGCCCAGGCTTTCATGGAAGA...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGTGTGCCTTTCAGCCTTaGGGTCTCTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMCAFQP*GLFLSA
Trigger: GGCCGACAAGAAGAGACCCCAAGGCTGAAAGGCACA...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATAAAATTAGCCGAGTGTaGTGGTGGGTACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNKISRV*WWVPVI
Trigger: GATTACAGGTACCCACCACCACACTCGGCTAATTTT...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGGCCACGGTAAAGTCTaGCGAAGCACCACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLGHGKV*RSTTVL
Trigger: TAGCACAGTGGTGCTTCGCCAGACTTTACCGTGGCC...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATTCGAACTGTTGCTGGTaGCAGGTCCATTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDSNCCW*QVHCHD
Trigger: GTCGTGACAATGGACCTGTCACCAGCAACAGTTCGA...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGGCAGGAGAATTGCTTaGGCCTGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSGRRIA*AWEAEI
Trigger: AATCTCTGCCTCCCAGGCTCAAGCAATTCTCCTGCC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCTTGAGTGCAAAAGTTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTLSAKV*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAA...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCCTTCCTGTATGGGCTTaGCTAGTTAATCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFLPVWA*LVNPQK
Trigger: TTTCTGTGGATTAACTAGTCAAGCCCATACAGGAAG...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCAGGTCAGCTCCGTCTaGCAGGAAGTAACCCACAGA +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSQVSSV*QEVTHR
Trigger: TCTGTGGGTTACTTCCTGGCAGACGGAGCTGACCTG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGAAGATCCCAGGTCTTaGCCAAGGTCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVEDPRS*PRSGST
Trigger: TGTGGAACCAGACCTTGGGCAAGACCTGGGATCTTC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGCAGCTGCATGCCTCCTaGCACCCTTTACTGATAGCT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMQLHAS*HPLLIA
Trigger: AGCTATCAGTAAAGGGTGGCAGGAGGCATGCAGCTG...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTCCAAGATCAAGCCACTaGACTCCATCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVPRSSH*TPSWAT
Trigger: TGTTGCCCAGGATGGAGTGCAGTGGCTTGATCTTGG...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCAATTCTAGACTTCAGTaGCGTCCTAAGAAGACAAAC +
Preference number: 4 (lower is better)
Translates to: FCLLATITSISAATDSTSNSRLQ*RPKKTN
Trigger: GTTTGTCTTCTTAGGACGGCACTGAAGTCTAGAATT...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAAGGGCCTGTCTCTTTTaGCCTCCATCCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLRACLF*PPSFFA
Trigger: GGCAAAGAAGGATGGAGGGCAAAAGAGACAGGCCCT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCTCTGATCTCTCTATCTaGCAGTATTTCCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFSDLSI*QYFLHH
Trigger: GTGATGGAGGAAATACTGGCAGATAGAGAGATCAGA...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATAATCTTCCCACTGACTaGCTCCTCCGCCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDNLPTD*LLRLLL
Trigger: AAGCAGAAGGCGGAGGAGGCAGTCAGTGGGAAGATT...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCTTCCTACCAGTCTCTaGCGACCGGTTACTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSLPTSL*RPVTVS
Trigger: GCTGACAGTAACCGGTCGGCAGAGACTGGTAGGAAG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTCTCGGTCCCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFLGPPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGGGACCGAG...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATTGTCACGACGTGTCCTaGTCCCCCTGGTTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDCHDVS*SPWFSH
Trigger: ATGAGAAAACCAGGGGGACCAGGACACGTCGTGACA...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCCAGCGAGGGGCCCATaGCTTCTCTCTAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSPARGP*LLSSLS
Trigger: TGAAAGACTAGAGAGAAGCCATGGGCCCCTCGCTGG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGCAGACTTAATCTGCTaGGCACTTCCCGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSADLIC*ALPVTS
Trigger: CGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTCATGTAGCTTTTCTGTaGATGGCTAAGGGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTHVAFL*MAKGCL
Trigger: GAGGCAACCCTTAGCCATCCACAGAAAAGCTACATG...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTCGAACTGTTGCTGGTaGCAGGTCCATTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSSNCCW*QVHCHD
Trigger: GTCGTGACAATGGACCTGTCACCAGCAACAGTTCGA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCTCTAGCTGTACCTCTTaGGTTTATTTGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCSSCTS*VYLLER
Trigger: CCTTTCCAGCAAATAAACTCAAGAGGTACAGCTAGA...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTGGCAGGACAATCACTTaGACCCAGGAGGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFGRTIT*TQEAEV
Trigger: AACCTCAGCCTCCTGGGTTCAAGTGATTGTCCTGCC...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCTGGTCTTGAACTCCTaGGCTCAACCACTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSLVLNS*AQPLLL
Trigger: TAGGAGGAGTGGTTGAGCTCAGGAGTTCAAGACCAG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCTCTGATCTCTCTATCTaGCAGTATTTCCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCSDLSI*QYFLHH
Trigger: GTGATGGAGGAAATACTGGCAGATAGAGAGATCAGA...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCCTTTGTCAGCTCCTTTaGCTATATTTGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: WAWENSVLGTFPSVILDFLCQLL*LYLHLS
Trigger: ACTGAGATGCAAATATAGGCAAAGGAGCTGACAAAG...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATTTCAAACGATTCTCCTaGCTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDFKRFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCAGGAGAATCGTTTGAA...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTATGAAAGCCTGGGCCTaGGAAAACTCTGTACTGGGC +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSMKAWA*ENSVLG
Trigger: GCCCAGTACAGAGTTTTCCCAGGCCCAGGCTTTCAT...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCCTGCTGGACTGCAGTaGCACTATCTCGGCTCATTA +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSPAGLQ*HYLGSL
Trigger: TAATGAGCCGAGATAGTGCCACTGCAGTCCAGCAGG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGGGCATTCAGTTAAGATaGCAAATTGAGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFSGTADLICWALPVTSMGIQLR*QIEFCR
Trigger: TCTGCAAAACTCAATTTGCCATCTTAACTGAATGCC...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 72 bp CTATTTCACTGTCTAGACTCTCTGTGCCTTTCAGCCTaGGGGTCTCTTCTTGTCGGCCTTCATTTCTATTTT +
Preference number: 4 (lower is better)
Translates to: LFHCLDSLCLSA*GSLLVGLHFYF
Trigger: AAAATAGAAATGAAGGCCGACAAGAAGAGACCCCAAGGCTGAAAGGCACAGAGAGTCTAGACAGTGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAACTGTAGGACATCATTaGCCAGAATACGGATCCCCA +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLTVGHH*PEYGSP
Trigger: TGGGGATCCGTATTCTGGTCAATGATGTCCTACAGT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGAAGGGGAAGGGATGTaGGTTAGCTGGAAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSEGEGM*VSWKRN
Trigger: GTTTCTCTTCCAGCTAACTCACATCCCTTCCCCTTC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTCTAGCTGTACCTCTTaGGTTTATTTGCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTSSCTS*VYLLER
Trigger: CCTTTCCAGCAAATAAACTCAAGAGGTACAGCTAGA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTAATCCGAATTGTCTTTaGAAAGTCAAAAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTNPNCL*KVKRGR
Trigger: CCGACCCCTTTTGACTTTTCAAAGACAATTCGGATT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCAATCCGAATTGTCTTTaGAAAGTCAAAAGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTNPNCL*KVKRGR
Trigger: CCGACCCCTTTTGACTTTTCAAAGACAATTCGGATT...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGTCTCTCAGGATCTATaGCAGCCTTTCTCCATATTT +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTVSQDL*QPFSIF
Trigger: AAATATGGAGAAAGGCTGTCATAGATCCTGAGAGAC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTCTCCTCTTGCTCTTCTaGTCTCTCTATCTGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVLLLLF*SLYLPV
Trigger: TACTGGCAGATAGAGAGATCAGAAGAGCAAGAGGAG...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATGTTTTTATGACTCTATaGTGGAGACTTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNVFMTL*WRLLTI
Trigger: GATTGTGAGAAGTCTCCATCATAGAGTCATAAAAAC...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTCCCAGCCAGCAAACATaGCTTCTAGAAGTACAGACT +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVPSQQT*LLEVQT
Trigger: AGTCTGTACTTCTAGAAGTCATGTTTGCTGGCTGGG...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCATTTGCTGGAAAGGATaGTCATCTGATGACGGATTT +
Preference number: 4 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCICWKG*SSDDGF
Trigger: AAATCCGTCATCAGATGAGCATCCTTTCCAGCAAAT...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTACAGCAGACTTAATCTaGTGGGCACTTCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFTADLI*WALPVT
Trigger: GGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGT...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTATGGATGGCTAAGGGTTaGCTCTCTCAGTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLWMAKG*LSQSIV
Trigger: AACAATGGACTGAGAGAGGCAACCCTTAGCCATCCA...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTCCCCCATCTGTCCCTaGGTTAAAGCAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSSPICP*VKAKSF
Trigger: GAAGCTCTTTGCTTTAACCCAGGGACAGATGGGGGA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGCCAGGTTCTGTCTCTTaGCAACTATCACGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMPGSVS*QLSRPS
Trigger: AGATGGACGTGATAGTTGCCAAGAGACAGAACCTGG...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTCCAGGTTCTGTCTCTTaGCAACTATCACGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVPGSVS*QLSRPS
Trigger: AGATGGACGTGATAGTTGCCAAGAGACAGAACCTGG...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
3UTR CAA 72 bp TCTTTGTCAGCTCCTTTGCCTATATTTGCATCTCAGTaGACACCCCTGATTCTGACTTGTCCTTATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLSAPLPIFASQ*TPLILTCPYLP
Trigger: AGGAAGATAAGGACAAGTCAGAATCAGGGGTGTCAACTGAGATGCAAATATAGGCAAAGGAGCTGACAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATAGCTGGAAGAGAAACTaGGATTCTGATGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDSWKRN*DSDEQV
Trigger: GACTTGCTCATCAGAATCTCAGTTTCTCTTCCAGCT...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTAATTCTAGACTTCAGTaGCGTCCTAAGAAGACAAAC +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTNSRLQ*RPKKTN
Trigger: GTTTGTCTTCTTAGGACGGCACTGAAGTCTAGAATT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTTGTCCTTTGTCTTTCTaGCTGCCTCCAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFCPLSF*LPPSPH
Trigger: ATGGGGACTTGGAGGCAGGCAGAAAGACAAAGGACA...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAATCACAATCCAGTCCTaGCTTCCTCAAGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLITIQS*LPQVSL
Trigger: CAGTGAAACTTGAGGAAGGCAGGACTGGATTGTGAT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTACAGGAGTGTGGCTTTaGGAACCAGAAACATCAGCA +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFTGVWL*EPETSA
Trigger: TGCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGT...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTACTTTTATCAGTTCTGTaGCTTTGGTGTCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLLLSVL*LWCLSG
Trigger: TCCTGAGAGACACCAAAGTCACAGAACTGATAAAAG...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCGTTTTTATGACTCTATaGTGGAGACTTCTCACAATC +
Preference number: 4 (lower is better)
Translates to: TKKSLASSLVDMESVLRTVFMTL*WRLLTI
Trigger: GATTGTGAGAAGTCTCCATCATAGAGTCATAAAAAC...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGCCTGGCCAATATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSAWPIW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATATTGGCCAGGC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTTCCCACCTCTCCTCTTaGTCTTCTGATCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFSHLSS*SSDLSI
Trigger: GATAGAGAGATCAGAAGAGCAAGAGGAGAGGTGGGA...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATTCATTTCTGGGTTCCTaGCTCTTCTTTGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDSFLGS*LFFVLW
Trigger: CCAAAGAACAAAGAAGAGGCAGGAACCCAGAAATGA...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTTCTTCCATGAAAGCCTaGGCCTGGGAAAACTCTGTA +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFSSMKA*AWENSV
Trigger: TACAGAGTTTTCCCAGGCCCAGGCTTTCATGGAAGA...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTATGAATGTATACCAGTaGCCAAAGAAAAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTMNVYQ*PKKRCM
Trigger: CATACACCTTTTCTTTGGCCACTGGTATACATTCAT...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTCAGACTCCTACCAAATaGAGCATCTGGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFQTPTK*SIWQSL
Trigger: CAGAGATTGCCAGATGCTCCATTTGGTAGGAGTCTG...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTATTCCTTTATCCTCCTaGAGCCTTCTCTCACACAGT +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFIPLSS*SLLSHS
Trigger: ACTGTGTGAGAGAAGGCTGCAGGAGGATAAAGGAAT...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGCTTTGTCAGCTCCTTTaGCTATATTTGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMLCQLL*LYLHLS
Trigger: ACTGAGATGCAAATATAGGCAAAGGAGCTGACAAAG...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTATCTGCTCTTATTTTCTaGTTGTGTTTAGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLSALIF*LCLAPS
Trigger: GGAAGGAGCTAAACACAAGCAGAAAATAAGAGCAGA...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTACATCATCTTTATGTTaGCCACACTCCAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVTSSLC*PHSNSL
Trigger: CAGAGAATTGGAGTGTGGGCAACATAAAGATGATGT...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGACATCATCTTTATGTTaGCCACACTCCAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMTSSLC*PHSNSL
Trigger: CAGAGAATTGGAGTGTGGGCAACATAAAGATGATGT...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTGTAGCAATTCGTGTGTaGTCCCAAATTCTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFVAIRV*SQILPS
Trigger: GCTTGGAAGAATTTGGGACCACACACGAATTGCTAC...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTTCCTCAAGTTTCACTaGCTCACCATGGTAGCAATT +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSFLKFH*LTMVAI
Trigger: AATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTCTGTCACCTCTATGTaGATAATCCTTCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RCIFILCACFYDSMMETSSVTSM*IILLSF
Trigger: GAAAGAGAGAAGGATTATTCACATAGAGGTGACAGA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR TCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTTCACTCAAACCATCATaGATGTATACCAGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFSLKPS*MYTSGQ
Trigger: TTGGCCACTGGTATACATTCATGATGGTTTGAGTGA...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAACTCTGACAAAATTCTaGATTGTTTCTCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLTLTKF*IVSLAH
Trigger: GTGAGCTAGAGAAACAATGCAGAATTTTGTCAGAGT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTACTTGAGTTTATTTGCTaGAAAGGATGCTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLLEFIC*KGCSSD
Trigger: ATCAGATGAGCATCCTTTCCAGCAAATAAACTCAAG...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATCTTGAGTTTATTTGCTaGAAAGGATGCTCATCTGAT +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDLEFIC*KGCSSD
Trigger: ATCAGATGAGCATCCTTTCCAGCAAATAAACTCAAG...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CCA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGGCATTCAGTTAAGATaGCAAATTGAGTTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVGIQLR*QIEFCR
Trigger: TCTGCAAAACTCAATTTGCCATCTTAACTGAATGCC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATCACTATCTATACCTTTaGCTCTTGGGTTTTTATCTA +
Preference number: 4 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDHYLYL*LLGFYL
Trigger: TAGATAAAAACCCAAGAGGCAAAGGTATAGATAGTG...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR GCA 90 bp CATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTTGTTTACTCTGACAAAATTCTaGATTGTTTCTCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HSSYLSVPPLLSKVFVLFTLTKF*IVSLAH
Trigger: GTGAGCTAGAGAAACAATGCAGAATTTTGTCAGAGT...AAACAAAACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 90 bp TCCCGAGCGGCCGATTCCGGCGTGGGCAGCCGCCGCAACCCCCAGTaGAGCCCCCGGAACGCGAGGAAGGAGGCGCCGGCCACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SRAADSGVGSRRNPQ*SPRNARKEAPATRS
Trigger: GCTCCTGGTGGCCGGCGCCTCCTTCCTCGCGTTCCGGGGGCTGCACTGGGGGTTGCGGCGGCTGCCCACGCCGGAATCGGCCGCTCGGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 90 bp CCCGAGAGCAGGCTGTGCGCCAGGGAGACGCAGAGGTTCCACCACTaGCAGCGGTCCCGAGCGGCCGATTCCGGCGTGGGCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PESRLCARETQRFHH*QRSRAADSGVGSRR
Trigger: GCGGCGGCTGCCCACGCCGGAATCGGCCGCTCGGGACCGCTGGCAGTGGTGGAACCTCTGCGTCTCCCTGGCGCACAGCCTGCTCTCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS CCA 90 bp AGAGGTTCCACCACTGCCAGCGGTCCCGAGCGGCCGATTCCGGCGTaGGCAGCCGCCGCAACCCCCAGTGCAGCCCCCGGAACGCGAGGA +
Preference number: 5 (lower is better)
Translates to: RGSTTASGPERPIPA*AAAATPSAAPGTRG
Trigger: TCCTCGCGTTCCGGGGGCTGCACTGGGGGTTGCGGCGGCTGCCCACGCCGGAATCGGCCGCTCGGGACCGCTGGCAGTGGTGGAACCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 90 bp TACAGTGACAGGCCGAGCAGCGCCCCGGTCCCCGAGAGCAGGCTGTaGGCCAGGGAGACGCAGAGGTTCCACCACTGCCAGCGGTCCCGA +
Preference number: 5 (lower is better)
Translates to: YSDRPSSAPVPESRL*ARETQRFHHCQRSR
Trigger: TCGGGACCGCTGGCAGTGGTGGAACCTCTGCGTCTCCCTGGCGCACAGCCTGCTCTCGGGGACCGGGGCGCTGCTCGGCCTGTCACTGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS CCA 90 bp CAGACACAGCCACCAGCACCAGAGCCCAGCGCGGGTGGCCATGGATaGGGTCGGCGGCCATCTGAGGGTACAGTGACAGGCCGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: QTQPPAPEPSAGGHG*GRRPSEGTVTGRAA
Trigger: CGCTGCTCGGCCTGTCACTGTACCCTCAGATGGCCGCCGACCCCATCCATGGCCACCCGCGCTGGGCTCTGGTGCTGGTGGCTGTGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCTATAATCCCAGTAGTTaGGGAGCCCAAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: SPASASSVAGITGACHHAYNPSS*GAQGGR
Trigger: CCGCCCACCTTGGGCTCCCAAACTACTGGGATTATA...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCAGTCTACCTCTGCCCTaGTTCTTCCATGAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: SPASASSVAGITGACHHASLPLP*FFHESL
Trigger: CAGGCTTTCATGGAAGAACAAGGGCAGAGGTAGACT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCAACAGGAGTGTGGCTTaGAGAACCAGAAACATCAGC +
Preference number: 5 (lower is better)
Translates to: SPASASSVAGITGACHHANRSVA*RTRNIS
Trigger: GCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGTT...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGCCTCCTCAGTAGCCGGGATTACGGGCGCCTGCCACCACGCCCCTTGGGGTCTCTTCTaGTCGGCCTTCATTTCTATT +
Preference number: 5 (lower is better)
Translates to: SPASASSVAGITGACHHAPWGLF*SAFISI
Trigger: AATAGAAATGAAGGCCGACAAGAAGAGACCCCAAGG...GGCGTGGTGGCAGGCGCCCGTAATCCCGGCTACTGAGGAGGCTGAGGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTCTGAGAGTCGAACTGTaGCTGGTGACAGGTCCATTG +
Preference number: 5 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLALRVEL*LVTGPL
Trigger: CAATGGACCTGTCACCAGCAACAGTTCGACTCTCAG...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTTTTTGGCCGGGTGTGTaGGCTCACGCATATAATCCC +
Preference number: 5 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAFWPGV*AHAYNP
Trigger: GGGATTATATGCGTGAGCCAACACACCCGGCCAAAA...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 90 bp GGCAGCTCACCACCACCAAATGATGACAGAGAAGATCCCAGGTCTTaGCCAAGGTCTGGTTCCACAGCAGGTCAGCTCCGTCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: GSSPPPNDDREDPRS*PRSGSTAGQLRLPG
Trigger: TCCTGGCAGACGGAGCTGACCTGCTGTGGAACCAGACCTTGGGCAAGACCTGGGATCTTCTCTGTCATCATTTGGTGGTGGTGAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTCTCCCCGCCGCGCCTTaGGGATCAGCAGGAACTTTT +
Preference number: 5 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCLPAAP*GSAGTF
Trigger: AAAAGTTCCTGCTGATCCCAAAGGCGCGGCGGGGAG...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611774.2
CDS-3UTR CAA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTGACTGTAGGACATCATaGACCAGAATACGGATCCCC +
Preference number: 5 (lower is better)
Translates to: VWSQILPSVHYILPHLGADCRTS*TRIRIP
Trigger: GGGGATCCGTATTCTGGTCAATGATGTCCTACAGTC...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTATCAGTTCTGTGACTTaGGTGTCTCTCAGGATCTAT +
Preference number: 5 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAISSVT*VSLRIY
Trigger: ATAGATCCTGAGAGACACCAAAGTCACAGAACTGAT...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTTCTTTGTCAGCTCCTTaGCCTATATTTGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLASLSAP*PIFASQ
Trigger: CTGAGATGCAAATATAGGCAAAGGAGCTGACAAAGA...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCAGCTCCCCGGACTCGTCCCCGCTCTTCTCTGTTCCCACCTCTCCTCTTGCTGCTCTTATTTTCTGCTaGTGTTTAGCTCCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: LSSPDSSPLFSVPTSPLAALIFC*CLAPSN
Trigger: GTTGGAAGGAGCTAAACACAAGCAGAAAATAAGAGC...AGCAAGAGGAGAGGTGGGAACAGAGAAGAGCGGGGACGAGTCCGGGGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GAAACTGAGATTCTGATGAGCAAGTCTGGCCCTCACCCTGATGGGGGACTGTGCTTGCGCTGCAGCTGTTaGTCCTTTGTCTTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: ETEILMSKSGPHPDGGLCLRCSC*SFVFLP
Trigger: AGGCAGAAAGACAAAGGACAAACAGCTGCAGCGCAA...GCACAGTCCCCCATCAGGGTGAGGGCCAGACTTGCTCATCAGAATCTCAGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GTGTGGTCCCAAATTCTTCCAAGCGTCCACTACATCCTGCCCCACCTGGGAGCTCTAATGGTCAAGTTCTaGGGCAGCCTTCATAGACAC +
Preference number: 5 (lower is better)
Translates to: VWSQILPSVHYILPHLGALMVKF*GSLHRH
Trigger: GTGTCTATGAAGGCTGCCCAAGAACTTGACCATTAG...AGCTCCCAGGTGGGGCAGGATGTAGTGGACGCTTGGAAGAATTTGGGACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCAGAAGATCCCAGGTCTaGCCCAAGGTCTGGTTCCAC +
Preference number: 5 (lower is better)
Translates to: FCLLATITSISAATDSTSRRSQV*PKVWFH
Trigger: GTGGAACCAGACCTTGGGCAAGACCTGGGATCTTCT...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCACTTGAGTGCAAAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPLECKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAAG...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CCCATCCAACATCAGCATTTCTTCTTAGATCCGAGGAAGGGGAAGGGATGTGAGGCAGCTGTTTGTCCTTaGTCTTTCTGCCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PIQHQHFFLDPRKGKGCEAAVCP*SFCLPP
Trigger: TGGAGGCAGGCAGAAAGACAAAGGACAAACAGCTGC...CTCACATCCCTTCCCCTTCCTCGGATCTAAGAAGAAATGCTGATGTTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCAAACATCAGCAGCAATaGCTGTGGCCCAGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: FCLLATITSISAATDSTSKHQQQ*LWPRFC
Trigger: ACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTT...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGAAACATCAGCAGCAATaGCTGTGGCCCAGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: LFSGTADLICWALPVTSMKHQQQ*LWPRFC
Trigger: ACAGAACCTGGGCCACAGCAATTGCTGCTGATGTTT...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp ACAAAGAAATCATTAGCAAGTAGCTTGGTAGACATGGAGTCCGTCTTGAGGACCAGAAGATCCCAGGTCTaGCCCAAGGTCTGGTTCCAC +
Preference number: 5 (lower is better)
Translates to: TKKSLASSLVDMESVLRTRRSQV*PKVWFH
Trigger: GTGGAACCAGACCTTGGGCAAGACCTGGGATCTTCT...GGTCCTCAAGACGGACTCCATGTCTACCAAGCTACTTGCTAATGATTTCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp ATCAGCAGCAATTGCTGTGGCCCAGGTTCTGTCTCTTGGCAACTATCACGTCCATCCCACTGCCAGAATTaGGTTATAGGTGAGATCTCT +
Preference number: 5 (lower is better)
Translates to: ISSNCCGPGSVSWQLSRPSHCQN*VIGEIS
Trigger: AGAGATCTCACCTATAACCAAATTCTGGCAGTGGGA...TGGACGTGATAGTTGCCAAGAGACAGAACCTGGGCCACAGCAATTGCTGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TGGGCCTGGGAAAACTCTGTACTGGGCACCTTTCCTTCTGTAATTCTAGACTTCAGTCTACCTCTGCCCTaGTTCTTCCATGAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: WAWENSVLGTFPSVILDFSLPLP*FFHESL
Trigger: CAGGCTTTCATGGAAGAACAAGGGCAGAGGTAGACT...GAAGTCTAGAATTACAGAAGGAAAGGTGCCCAGTACAGAGTTTTCCCAGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCCTGTTCTCACGTCTGTATATTTGCATCTCAGTaGACACCCCTGATTCTGACT +
Preference number: 5 (lower is better)
Translates to: AGPGLRRKTGVCACSHVCIFASQ*TPLILT
Trigger: AGTCAGAATCAGGGGTGTCAACTGAGATGCAAATAT...ACAGACGTGAGAACAGGCGCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTATAATCCCAGTAGTTaGGGAGCCCAAGGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTYNPSS*GAQGGR
Trigger: CCGCCCACCTTGGGCTCCCAAACTACTGGGATTATA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TTCTGTCTCTTGGCAACTATCACGTCCATCTCTGCTGCTACAGATAGCACCTCCCTAATGGTCAAGTTCTaGGGCAGCCTTCATAGACAC +
Preference number: 5 (lower is better)
Translates to: FCLLATITSISAATDSTSLMVKF*GSLHRH
Trigger: GTGTCTATGAAGGCTGCCCAAGAACTTGACCATTAG...GGAGGTGCTATCTGTAGCAGCAGAGATGGACGTGATAGTTGCCAAGAGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGTCATTAGCAAGTAGCTaGGTAGACATGGAGTCCGTC +
Preference number: 5 (lower is better)
Translates to: LFSGTADLICWALPVTSMSLASS*VDMESV
Trigger: GACGGACTCCATGTCTACCAAGCTACTTGCTAATGA...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTCTGGTGACAGGTCCATaGTCACGACGTGTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVLVTGP*SRRVLV
Trigger: GACCAGGACACGTCGTGACAATGGACCTGTCACCAG...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTCCCAGGTTCTGTCTCTaGGCAACTATCACGTCCATC +
Preference number: 5 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTPRFCL*ATITSI
Trigger: GATGGACGTGATAGTTGCCAAGAGACAGAACCTGGG...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCCTTGAGTGCAAAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCLECKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAACTTTTGCACTCAAG...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTTCCTCAAGTTTCACTGGCTCACCATGGTAGCAATTCGTGTGTGGTCCCAAATCCTTGGGGTCTCTTCTaGTCGGCCTTCATTTCTATT +
Preference number: 5 (lower is better)
Translates to: LPQVSLAHHGSNSCVVPNPWGLF*SAFISI
Trigger: AATAGAAATGAAGGCCGACAAGAAGAGACCCCAAGG...ATTTGGGACCACACACGAATTGCTACCATGGTGAGCCAGTGAAACTTGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCAACAGGAGTGTGGCTTaGAGAACCAGAAACATCAGC +
Preference number: 5 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCNRSVA*RTRNIS
Trigger: GCTGATGTTTCTGGTTCTCAAAGCCACACTCCTGTT...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTCCCAGGTTCTGTCTCTaGGCAACTATCACGTCCATC +
Preference number: 5 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVPRFCL*ATITSI
Trigger: GATGGACGTGATAGTTGCCAAGAGACAGAACCTGGG...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTGACTGTAGGACATCATaGACCAGAATACGGATCCCC +
Preference number: 5 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVDCRTS*TRIRIP
Trigger: GGGGATCCGTATTCTGGTCAATGATGTCCTACAGTC...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTCTGAGAGTCGAACTGTaGCTGGTGACAGGTCCATTG +
Preference number: 5 (lower is better)
Translates to: RCIFILCACFYDSMMETSLRVEL*LVTGPL
Trigger: CAATGGACCTGTCACCAGCAACAGTTCGACTCTCAG...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp GCCTACTTACTCAGTTGTAATCACAATCCAGTCCTGCCTTCCTCAAGTTTCACTTCCCACTGCCAGAATTaGGTTATAGGTGAGATCTCT +
Preference number: 5 (lower is better)
Translates to: AYLLSCNHNPVLPSSSFTSHCQN*VIGEIS
Trigger: AGAGATCTCACCTATAACCAAATTCTGGCAGTGGGA...AGTGAAACTTGAGGAAGGCAGGACTGGATTGTGATTACAACTGAGTAAGTAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGGCCTCTCTCAGTCCATaGTTTAGTGGAACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMASLSP*FSGTAD
Trigger: GTCTGCTGTTCCACTAAACAATGGACTGAGAGAGGC...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp AATAAAAGGCTAGACACAGCAGGACCAGGGTTAAGGAGAAAAACAGGAGTGTGCGCTCTTATTTTCTGCTaGTGTTTAGCTCCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: NKRLDTAGPGLRRKTGVCALIFC*CLAPSN
Trigger: GTTGGAAGGAGCTAAACACAAGCAGAAAATAAGAGC...GCACACTCCTGTTTTTCTCCTTAACCCTGGTCCTGCTGTGTCTAGCCTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp TTGTTTAGTGGAACAGCAGACTTAATCTGCTGGGCACTTCCCGTCACCTCGATGTCACTATCTATACCTTaGCCTCTTGGGTTTTTATCT +
Preference number: 5 (lower is better)
Translates to: LFSGTADLICWALPVTSMSLSIP*PLGFLS
Trigger: AGATAAAAACCCAAGAGGCAAAGGTATAGATAGTGA...CATCGAGGTGACGGGAAGTGCCCAGCAGATTAAGTCTGCTGTTCCACTAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTTTTTGGCCGGGTGTGTaGGCTCACGCATATAATCCC +
Preference number: 5 (lower is better)
Translates to: RCIFILCACFYDSMMETSFWPGV*AHAYNP
Trigger: GGGATTATATGCGTGAGCCAACACACCCGGCCAAAA...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CGATGTATTTTCATCCTTTGCGCCTGTTTTTATGACTCTATGATGGAGACTTCTGCCTCTCTCAGTCCATaGTTTAGTGGAACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: RCIFILCACFYDSMMETSASLSP*FSGTAD
Trigger: GTCTGCTGTTCCACTAAACAATGGACTGAGAGAGGC...AGAAGTCTCCATCATAGAGTCATAAAAACAGGCGCAAAGGATGAAAATACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp ACACTCACTCAAACCATCATGAATGTATACCAGTGGCCAAAGAAAAGGTGTATGTCATTAGCAAGTAGCTaGGTAGACATGGAGTCCGTC +
Preference number: 5 (lower is better)
Translates to: TLTQTIMNVYQWPKKRCMSLASS*VDMESV
Trigger: GACGGACTCCATGTCTACCAAGCTACTTGCTAATGA...CATACACCTTTTCTTTGGCCACTGGTATACATTCATGATGGTTTGAGTGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTATGTATGTCTGTCTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAATCAGTTCTGTGACTTaGGTGTCTCTCAGGATCTAT +
Preference number: 5 (lower is better)
Translates to: LCMSVSVILRIFLYLRFLISSVT*VSLRIY
Trigger: ATAGATCCTGAGAGACACCAAAGTCACAGAACTGAT...TAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAGACAGACATACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTCTGTCATTCTTCGTATCTTTCTGTACCTCCGCTTCTTAGCAAGGTTTTTGTTTCTTTGTCAGCTCCTTaGCCTATATTTGCATCTCAG +
Preference number: 5 (lower is better)
Translates to: LCHSSYLSVPPLLSKVFVSLSAP*PIFASQ
Trigger: CTGAGATGCAAATATAGGCAAAGGAGCTGACAAAGA...AACAAAAACCTTGCTAAGAAGCGGAGGTACAGAAAGATACGAAGAATGACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS-3UTR CAA 90 bp CTTATTTTCTGCTTGTGTTTAGCTCCTTCCAACTGTGTTTTCCTCAGTCTCGATTCACTATCTATACCTTaGCCTCTTGGGTTTTTATCT +
Preference number: 5 (lower is better)
Translates to: LIFCLCLAPSNCVFLSLDSLSIP*PLGFLS
Trigger: AGATAAAAACCCAAGAGGCAAAGGTATAGATAGTGA...ATCGAGACTGAGGAAAACACAGTTGGAAGGAGCTAAACACAAGCAGAAAATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS CCA 72 bp ACCACTGCCAGCGGTCCCGAGCGGCCGATTCCGGCGTaGGCAGCCGCCGCAACCCCCAGTGCAGCCCCCGGA +
Preference number: 6 (lower is better)
Translates to: TTASGPERPIPA*AAAATPSAAPG
Trigger: TCCGGGGGCTGCACTGGGGGTTGCGGCGGCTGCCCACGCCGGAATCGGCCGCTCGGGACCGCTGGCAGTGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 72 bp AGGCTGTGCGCCAGGGAGACGCAGAGGTTCCACCACTaGCAGCGGTCCCGAGCGGCCGATTCCGGCGTGGGC +
Preference number: 6 (lower is better)
Translates to: RLCARETQRFHH*QRSRAADSGVG
Trigger: GCCCACGCCGGAATCGGCCGCTCGGGACCGCTGGCAGTGGTGGAACCTCTGCGTCTCCCTGGCGCACAGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 72 bp AGGCCGAGCAGCGCCCCGGTCCCCGAGAGCAGGCTGTaGGCCAGGGAGACGCAGAGGTTCCACCACTGCCAG +
Preference number: 6 (lower is better)
Translates to: RPSSAPVPESRL*ARETQRFHHCQ
Trigger: CTGGCAGTGGTGGAACCTCTGCGTCTCCCTGGCGCACAGCCTGCTCTCGGGGACCGGGGCGCTGCTCGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS GCA 72 bp CCCAGGGTGACCAGAGCAAGAGGAACCTGGTGGTGCTaGCGGAACAGCCACAGACTCATCCACCCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: PRVTRARGTWWC*RNSHRLIHPSG
Trigger: CCCGCTGGGGTGGATGAGTCTGTGGCTGTTCCGGCAGCACCACCAGGTTCCTCTTGCTCTGGTCACCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS TCA 72 bp AGAAGCCCACGTAGTGGCCAGACAGAACAGCGGTGCTaGGGCAGCTCACCACCACCAAATGATGACAGAGAA +
Preference number: 6 (lower is better)
Translates to: RSPRSGQTEQRC*GSSPPPNDDRE
Trigger: TTCTCTGTCATCATTTGGTGGTGGTGAGCTGCCTCAGCACCGCTGTTCTGTCTGGCCACTACGTGGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS CAA 72 bp AGGCTGAGAGTCGAACTGTTGCTGGTGACAGGTCCATaGTCACGACGTGTCCTGGTCCCCCTGGTTTTCTCA +
Preference number: 6 (lower is better)
Translates to: RLRVELLLVTGP*SRRVLVPLVFS
Trigger: TGAGAAAACCAGGGGGACCAGGACACGTCGTGACAATGGACCTGTCACCAGCAACAGTTCGACTCTCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS CAA 90 bp TCATGGCCAGGGCTGGGTGGATGGGGTCGAGACTGTAGGACATCATaGACCAGAATACGGATCCCCAATATGATGCTCATGATGCCCACA +
Preference number: 6 (lower is better)
Translates to: SWPGLGGWGRDCRTS*TRIRIPNMMLMMPT
Trigger: TGTGGGCATCATGAGCATCATATTGGGGATCCGTATTCTGGTCAATGATGTCCTACAGTCTCGACCCCATCCACCCAGCCCTGGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2
CDS CAA 72 bp GGGCTGGGTGGATGGGGTCGAGACTGTAGGACATCATaGACCAGAATACGGATCCCCAATATGATGCTCATG +
Preference number: 6 (lower is better)
Translates to: GLGGWGRDCRTS*TRIRIPNMMLM
Trigger: CATGAGCATCATATTGGGGATCCGTATTCTGGTCAATGATGTCCTACAGTCTCGACCCCATCCACCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330676.8
ENST00000611774.2