RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TKT (Homo sapiens)

Ensembl gene IDs: ENSG00000163931

Ensembl transcript IDs: ENST00000296289.10, ENST00000423516.5, ENST00000423525.6, ENST00000450814.6, ENST00000460243.1, ENST00000460343.5, ENST00000461139.5, ENST00000462138.6, ENST00000466765.1, ENST00000469678.1, ENST00000472528.5, ENST00000483706.1, ENST00000487660.1, ENST00000494523.2

Found 1004 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAAGGCCTCGTGCAGGGTCACCCCAGCCCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGGACCACCTTGGCTTGTCCGACCTGG +
Preference number: 1 (lower is better)
Translates to: AKASCRVTPAPITVT*SSLLFRTTLACPTW
Trigger: CCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGTGACCCTGCACGAGGCCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR TCA 90 bp GCCCGTCTTCCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGG +
Preference number: 1 (lower is better)
Translates to: ARLPRWKRRSGSRRG*CCSRRWRPCESGQR
Trigger: CCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR TCA 90 bp ACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTaGGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCC +
Preference number: 1 (lower is better)
Translates to: TGGRVHKCVSSSQQL*GFPGDSTSGRGTQP
Trigger: GGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR TCA 90 bp GAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGTaGTTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCA +
Preference number: 1 (lower is better)
Translates to: EWEAAIVLEVEGSCR*FQGDLGHPGPGPGP
Trigger: TGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR TCA 90 bp AGATCTCCGAGAAGGTGGAATTTTTGGTGTCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGCCCAGCTTGGCCAGTGCCTGCCCGT +
Preference number: 1 (lower is better)
Translates to: RSPRRWNFWCPHPGR*CGHWHGPAWPVPAR
Trigger: ACGGGCAGGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCATCATCGCCCTGGATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR TCA 90 bp TGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGC +
Preference number: 1 (lower is better)
Translates to: CSRRWRPCESGQRPA*RRLQKCCRRAPSCC
Trigger: GCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 90 bp GGGTGGCTATCTTGTCCCCAACTTTGTAGCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCACTGAGGGTGCGTCCTCCTGTGGAG +
Preference number: 1 (lower is better)
Translates to: GWLSCPQLCSWAGWA*GCWQCPLRVRPPVE
Trigger: CTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR GCA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTGCACT +
Preference number: 1 (lower is better)
Translates to: LQQLSRLPTSWYPVN*QVGDSDARLAHYCT
Trigger: AGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 90 bp TCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGGCCAGGTaGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCAGCT +
Preference number: 1 (lower is better)
Translates to: SASRLRQFPSPLRAR*TEVTMRDVGLSLSA
Trigger: AGCTGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CCA 90 bp TCTTGTCCCCAACTTTGTAGCTGGGCAGGCTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTGCGTCCTCCTGTGGAGGGGTTGCCA +
Preference number: 1 (lower is better)
Translates to: SCPQLCSWAGWACGC*QCPLRVRPPVEGLP
Trigger: TGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CCA 90 bp CCTTGCGGGTGGCTATCTTGTCCCCAACTTTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAATGTCCACTGAGGGTGCGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: PCGWLSCPQLCSWAG*ACGCWQCPLRVRPP
Trigger: AGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CCA 90 bp AGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTaGGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACA +
Preference number: 1 (lower is better)
Translates to: SSAGFPLLGTRLTAR*VTVMPGSPTTALDT
Trigger: TGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 90 bp GAGGGCAGTCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTaGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: EGSHLGTAEQVGAGA*DCRILCDIRSSWAS
Trigger: ACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CCA 90 bp GAATGGCCACAAGGTTGTCCAGCTTATAGATGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCTCTGACAGCTCCCCGTCTCCCAGCA +
Preference number: 1 (lower is better)
Translates to: EWPQGCPAYRCWRRP*PPIQSPLTAPRLPA
Trigger: TGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR TCA 90 bp CCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAAGGTTGTCCAGCTTATAGATGCTGG +
Preference number: 1 (lower is better)
Translates to: PSGAAVGPGHSGPGD*CLEWPQGCPAYRCW
Trigger: CCAGCATCTATAAGCTGGACAACCTTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR TCA 90 bp TTTGTAGCTGGGCAGGCTGGGCATGCGGATGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGGAGGGGTTGCCAGGATCTTCTTTTT +
Preference number: 1 (lower is better)
Translates to: FVAGQAGHADVGNVH*GCVLLWRGCQDLLF
Trigger: AAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR TCA 90 bp CTTATAGATGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTA +
Preference number: 1 (lower is better)
Translates to: LIDAGEGHGLPYRAL*QLPVSQQAIDSVAV
Trigger: TACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR GCA 90 bp AGTCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTaGAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCAC +
Preference number: 1 (lower is better)
Translates to: SHLGTAEQVGAGAWD*RILCDIRSSWASCH
Trigger: GTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CCA 90 bp GTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: VDTKHLQQLSRLPTS*YPVNCQVGDSDARL
Trigger: GAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 90 bp TTCATACCCGCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGC +
Preference number: 1 (lower is better)
Translates to: FIPALGLGDEAPHSL*NGIPVDTKHLQQLS
Trigger: GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGGTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 90 bp GTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTaGACTGGACACAGCCTCACCAATGCCACCTTCATAATAATGGTC +
Preference number: 1 (lower is better)
Translates to: VNCQVGDSDARLAHY*TGHSLTNATFIIMV
Trigger: GACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 90 bp TTGGCTTTGACAGGTTTATTCTCTCCAGACGGTCAGGAGGACAGGTaGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGG +
Preference number: 1 (lower is better)
Translates to: LALTGLFSPDGQEDR*TCPQMCLILATALR
Trigger: CCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAATAAACCTGTCAAAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462138.6
3UTR CCA 90 bp GCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATaGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTA +
Preference number: 1 (lower is better)
Translates to: AEFCVTSEAPGPVVT*SPRPHWQDPEICIL
Trigger: TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR TCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCGGTCAGCTTCCAGACTaGGGCAGTTCCCCAGCCCGC +
Preference number: 2 (lower is better)
Translates to: WGGPESAWSASRLRQFPSGQLPD*GSSPAR
Trigger: GCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACC...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR GCA 90 bp CTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGTGTTTCGGGACCGGGTaGCCGTCCAAGTCGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LVDVHLVLQWGRVTLAQACFGTG*PSKSEL
Trigger: CAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACA...CGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp CTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 2 (lower is better)
Translates to: LVDVHLVLQWGRVTLAQAGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...CGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTGGCCCTGAGAGTGCCTaGTCAGCTTCCAGACTGAGG +
Preference number: 2 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPGPESA*SASRLR
Trigger: CCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCC...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR TCA 90 bp TGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAATGGCCCCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: CCSGAGSLWPRRLMSRMAPYRAL*QLPVSQ
Trigger: CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGG...GGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp TGGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 2 (lower is better)
Translates to: WCLAWPKALHSSSTLCPSGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...GGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR-3UTR CCA 90 bp GGCGATGATGCGGTCACTGGCATGGCCCAGCTTGGCCAGTGCCTGCCCGTAGGCATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: GDDAVTGMAQLGQCLPVGMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...GCCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCATCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CAA 90 bp TCTTCCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: SSPMETPQWEPQRLM*LSEMAAMRIWSKAR
Trigger: GCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CAA 90 bp GGCCCGTCTTCCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: GPSSPMETPQWEPQR*MLLSEMAAMRIWSK
Trigger: CTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR-3UTR CCA 90 bp AGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 2 (lower is better)
Translates to: RILPLVARALSRMSFLSRPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...CCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR TCA 90 bp TGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTGACAGCTCCCCGTCTCCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: CWRRPWPPIQSPLTAPRLRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...GAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR TCA 90 bp TGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAATGCAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 2 (lower is better)
Translates to: WCCSGAGSLWPRRLMSRMQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR GCA 90 bp ATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGACCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 2 (lower is better)
Translates to: IWCCSGAGSLWPRRLMSRPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...TCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR TCA 90 bp CTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATAGCTACTCGGGAGGCTaGGGCAGGAGGAGAATCACT +
Preference number: 2 (lower is better)
Translates to: LGLAKGLAQLLHAVSIHDSYSGG*GRRRIT
Trigger: AGTGATTCTCCTCCTGCCTCAGCCTCCCGAGTAGCT...ATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGGGGACTTGGGGGAGGTaGGGCGGCCCTGAGAGTGCC +
Preference number: 2 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLGTWGR*GGPESA
Trigger: GGCACTCTCAGGGCCGCCCCACCTCCCCCAAGTCCC...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CCA 90 bp AGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCCAGGGGACTTGGGGGAGGTaGGGCGGCCCTGAGAGTGCC +
Preference number: 2 (lower is better)
Translates to: RILCDIRSSWASCHMESQGTWGR*GGPESA
Trigger: GGCACTCTCAGGGCCGCCCCACCTCCCCCAAGTCCC...CTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CCA 90 bp TATAGATGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTGACAGCTCCCCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 2 (lower is better)
Translates to: YRCWRRPWPPIQSPLTAPLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...GGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp AGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 2 (lower is better)
Translates to: SLCNGIPVDTKHLQQLSRPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...CCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 2 (lower is better)
Translates to: SDARLAHYCTGHSLTNATMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp ATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGACCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: IWCCSGAGSLWPRRLMSRPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...TCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR TCA 90 bp ACGTCGGTGAAAGCTTGTTTCGGGACCGGGTGCCCGTCCAAGTCGGAGCTGATCTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 2 (lower is better)
Translates to: TSVKACFGTGCPSKSELICVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...GATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR TCA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR TCA 90 bp GGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCATCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAA +
Preference number: 2 (lower is better)
Translates to: GAWPGQRPCTAPPRCVHPSGPGD*CLEWPQ
Trigger: TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGA...TGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR GCA 90 bp AGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCAAGAAGGCTGCAAAAGTaGTGCAGAAGGGCACCGTCC +
Preference number: 2 (lower is better)
Translates to: RWVTVMPGSPTTALDTASRRLQK*CRRAPS
Trigger: GGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCT...TGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR GCA 90 bp GAAAGCTTGTTTCGGGACCGGGTGCCCGTCCAAGTCGGAGCTGATCTTCCTCAGGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: ESLFRDRVPVQVGADLPQVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...CTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR GCA 90 bp GGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 2 (lower is better)
Translates to: GAWPGQRPCTAPPRCVHPPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...TGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGATTCCAAGGGGACTTaGGACACCCAGGTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPDSKGT*DTQVLA
Trigger: GGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATC...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CCA 90 bp TCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTGCAGAATTCTCCGCTCAGGGCCAGGTaGACTGAGGTCACAATGAGG +
Preference number: 2 (lower is better)
Translates to: SPRNSRAGRGWSLGLQNSPLRAR*TEVTMR
Trigger: CCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGG...AGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CCA 90 bp TCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGAGCGAGACTCCATCTaGCCTTGTCGAAGTATTTGC +
Preference number: 2 (lower is better)
Translates to: SGRCPSGAAVGPGHSGPGERDSI*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGATGGAGTCTCGCTC...GCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR TCA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGCCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LQQLSRLPTSWYPVNCQVPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...CACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR GCA 90 bp GGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGGGCTTGATGGTGAACCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 2 (lower is better)
Translates to: GGTSAVENEFSVQGLDGEPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...TTCACCATCAAGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR GCA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 2 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNRLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTGCTCTGAGGATTTCCTaGGGACTCCACCAGTGGCCG +
Preference number: 2 (lower is better)
Translates to: GQEDRWTCPQMCLILATAALRIS*GLHQWP
Trigger: CGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGC...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CCA 90 bp GCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCTACTCGATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 2 (lower is better)
Translates to: APRLPASNRLGSCSPSYSMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...CGAGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp AAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCGTAGGCCTTGCGGGTaGCTATCTTGTCCCCAACTT +
Preference number: 2 (lower is better)
Translates to: KARVKKAAKVLQKGTVLLRRPCG*LSCPQL
Trigger: AAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACG...CAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CCA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCTGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 2 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CCA 90 bp TGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCTCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: CAMASLSIPNIFSSSAGFSSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...GAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR TCA 90 bp GGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGAGGGCAGTTGCAGGTaGTTCCAAGGGGACTTGGGA +
Preference number: 2 (lower is better)
Translates to: GQQASEPPYPRRPDCKAVEGSCR*FQGDLG
Trigger: TCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTC...CACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR TCA 90 bp GTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCCAGGGCCAGGTGGACTaGGGTCACAATGAGGGATGT +
Preference number: 2 (lower is better)
Translates to: VRRTGGRVHKCVSSSQQLQGQVD*GHNEGC
Trigger: ACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTG...GAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR TCA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 2 (lower is better)
Translates to: EGLAPLLVDVHLVLQWGRCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...CCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR-3UTR GCA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCCTGCCCGTAGGCCTTaGGGGTGGCTATCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSPARRP*GWLSCP
Trigger: GGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGG...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR GCA 90 bp GATCTGGCTGTAGATCTCCTGGATGATCTGCTCAGCCATGTTTTTGGGGAGGGGCGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 2 (lower is better)
Translates to: DLAVDLLDDLLSHVFGEGRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...CCCCTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CCA 90 bp CCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PVDTKHLQQLSRLPTSWYGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...GTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CCA 90 bp TTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 2 (lower is better)
Translates to: LVMRPLTACAMASLSIPNAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...GTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNPITVT*SSLLFR
Trigger: CCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGG...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CAA 90 bp CACTTCATACCCGCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: HFIPALGLGDEAPHS*CNGIPVDTKHLQQL
Trigger: GAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGGTATGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR TCA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 2 (lower is better)
Translates to: TACAMASLSIPNIFSSSAGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCAGAGCAGGTCGGGGCTaGAGCTTGGGACTGCAGAAT +
Preference number: 2 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIRAGRG*SLGLQN
Trigger: ATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCT...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CAA 90 bp GGATGTTGGCAATGTCCACTGAGGGTGCGTCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGCTCTGGATCTGGCTGTAGATCTCCT +
Preference number: 2 (lower is better)
Translates to: GCWQCPLRVRPPVEG*PGSSFCSGSGCRSP
Trigger: AGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR TCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGCAGAATTCTGTGTaGCATCAGAAGCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GQEDRWTCPQMCLILATALQNSV*HQKLLG
Trigger: GCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAG...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR TCA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTCATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 2 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR GCA 90 bp CTGACAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: LTAPRLPASNRLGSCSPSISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...GCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CCA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCCCCAGAACCTGCACTaGCTGCAAACACATCAAAAA +
Preference number: 2 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVPQNLH*LQTHQK
Trigger: TTTTTGATGTGTTTGCAGCCAGTGCAGGTTCTGGGG...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462138.6
3UTR-3UTR TCA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATCTCTCAGTACATCTTTaGGCACCTTTCCCAGAATCT +
Preference number: 2 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNLSVHL*APFPES
Trigger: AGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAG...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR TCA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 2 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR TCA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 2 (lower is better)
Translates to: LQQLSRLPTSWYPVNCQVCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...CACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR TCA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCCCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: TACAMASLSIPNIFSSSAPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR GCA 90 bp GGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGGGCTTGATGGTGAAATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 2 (lower is better)
Translates to: GGTSAVENEFSVQGLDGEMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...TTCACCATCAAGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp TTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGAGATCTCCGAGAAGGTaGAATTTTTGGTGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: LLSEMAAMRIWSKARVKKRSPRR*NFWCPH
Trigger: ATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT...CTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CCA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCTGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 2 (lower is better)
Translates to: TACAMASLSIPNIFSSSACCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR GCA 90 bp CTGGATCTGGCTGTAGATCTCCTGGATGATCTGCTCAGCCATGTTTTTGGGGAGGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 2 (lower is better)
Translates to: LDLAVDLLDDLLSHVFGEGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...CTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR-3UTR GCA 90 bp GATCTTTTCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTGCAGGGTCACCCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: DLFFLQQFGSGQGLVQGHPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...GTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CCA 90 bp AGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCCAGGACATCAGAAGCTCCTaGGCCAGTTGTCACATGGAG +
Preference number: 2 (lower is better)
Translates to: RILCDIRSSWASCHMESQDIRSS*ASCHME
Trigger: CTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTC...CTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR TCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTCAGTACATCTTTaGGCACCTTTCCCAGAATCT +
Preference number: 2 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQLSVHL*APFPES
Trigger: AGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAG...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462138.6
3UTR-3UTR GCA 90 bp ACCAATGCCACCTTCATAATAATGGTCCTCCACGGTGAGGATCCTGCCCTTGGTATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 2 (lower is better)
Translates to: TNATFIIMVLHGEDPALGMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...ACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR GCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTGCCAGTATAAGGTTTTaGACAGTTGACCTTATAAGC +
Preference number: 2 (lower is better)
Translates to: GQEDRWTCPQMCLILATAASIRF*TVDLIS
Trigger: GCTTATAAGGTCAACTGTGCAAAACCTTATACTGGC...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CCA 90 bp GCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTATGTTGATCTTTTCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: ASLSIPNIFSSSAGFPLLMLIFS*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGAAAAGATCAACAT...AAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
3UTR-3UTR TCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTACTAGTTAAAAGGATATaGCAAGGACGAGGGACAACA +
Preference number: 2 (lower is better)
Translates to: VVTWSPRPHWQDPEICILLVKRI*QGRGTT
Trigger: TGTTGTCCCTCGTCCTTGTCATATCCTTTTAACTAG...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR TCA 72 bp GGGCAGGCTGGGCATGCGGATGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGGAGGGGTTGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: GQAGHADVGNVH*GCVLLWRGCQD
Trigger: ATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR GCA 72 bp TCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCGATAACGGTCACCTGG +
Preference number: 3 (lower is better)
Translates to: SFFSSSAAAKAS*RVTPAPITVTW
Trigger: CCAGGTGACCGTTATCGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CCA 72 bp TGGGAGGGCCCGTCTTCCCCGATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATG +
Preference number: 3 (lower is better)
Translates to: WEGPSSPMETPQ*EPQRLMLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGCCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CAA 90 bp ACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCGAGTCCCAGGCCCCATaGGCAAGACCCAGAAATCTG +
Preference number: 3 (lower is better)
Translates to: TALRISWGLHQWPGHPALESQAP*ARPRNL
Trigger: CAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTC...GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp CTGACAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCCCCGGGAGGCGGAGGTaGCAGTGGGCCGAGATCGTA +
Preference number: 3 (lower is better)
Translates to: LTAPRLPASNRLGSCSPSPGRRR*QWAEIV
Trigger: TACGATCTCGGCCCACTGCAACCTCCGCCTCCCGGG...GCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR TCA 72 bp CCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGGCGGCCATGCGAATCT +
Preference number: 3 (lower is better)
Translates to: PRWKRRSGSRRG*CCSRRWRPCES
Trigger: AGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 72 bp AGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCGCGATGCTCACCATGT +
Preference number: 3 (lower is better)
Translates to: RLQKCCRRAPSC*GWHSPPRCSPC
Trigger: ACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 72 bp CTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGATGCCAGGCTCGCCCAC +
Preference number: 3 (lower is better)
Translates to: LSRLPTSWYPVN*QVGDSDARLAH
Trigger: GTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 72 bp ATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTaGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: MCLILATALRIS*GLHQWPGHPAL
Trigger: GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CCA 72 bp GCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTC +
Preference number: 3 (lower is better)
Translates to: APLLVDVHLVLQ*GRVTLAQAIDV
Trigger: GACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp TTCTACCCCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCAATGATGGCTGTTGGGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 3 (lower is better)
Translates to: FYPRDPSALEGLGNDGCWAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...CCAACAGCCATCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR-3UTR CAA 90 bp TCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 3 (lower is better)
Translates to: SGRCPSGAAVGPGHSGPGVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...GCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp GCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCTACTCGCACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 3 (lower is better)
Translates to: APRLPASNRLGSCSPSYSHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...CGAGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR TCA 72 bp CCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGGCCTCGCACCGCTTCT +
Preference number: 3 (lower is better)
Translates to: PCTAPPRCVHPR*WHANRRPRTAS
Trigger: AGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR GCA 72 bp ACAGAGCGAGACTCCATCTGGCCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCACAAGCGGCCCCGAGGC +
Preference number: 3 (lower is better)
Translates to: TERDSIWPCRSI*RCRPSHKRPRG
Trigger: GCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGATGGAGTCTCGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp TGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAATGCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 3 (lower is better)
Translates to: WCCSGAGSLWPRRLMSRMRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...CATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTCTCTTCAGGACCACCTaGGCTTGTCCGACCTGGAAG +
Preference number: 3 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTLFRTT*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAG...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGAGACTCCATCTGGCCTaGTCGAAGTATTTGCCGGTG +
Preference number: 3 (lower is better)
Translates to: EGLAPLLVDVHLVLQWGRRLHLA*SKYLPV
Trigger: CACCGGCAAATACTTCGACAAGGCCAGATGGAGTCT...CCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR TCA 72 bp GCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGTaGTTCCAAGGGGACTTGGGACACCCAGGTCCTGGC +
Preference number: 3 (lower is better)
Translates to: AAIVLEVEGSCR*FQGDLGHPGPG
Trigger: GCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR TCA 72 bp AGCAGCAGGGGGAGAAATCCACTGTGGTCAGCAGTGTaGGGGCAGTCACCTAGGAACAGCAGAGCAGGTCGG +
Preference number: 3 (lower is better)
Translates to: SSRGRNPLWSAV*GQSPRNSRAGR
Trigger: CCGACCTGCTCTGCTGTTCCTAGGTGACTGCCCTCACACTGCTGACCACAGTGGATTTCTCCCCCTGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR TCA 72 bp CGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTaGGGATTTCCTGGGGACTCCACCAGTGGCCGGGGC +
Preference number: 3 (lower is better)
Translates to: RVHKCVSSSQQL*GFPGDSTSGRG
Trigger: GCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR TCA 72 bp AGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCG +
Preference number: 3 (lower is better)
Translates to: RWRPCESGQRPA*RRLQKCCRRAP
Trigger: CGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 72 bp GGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTaGAGAATTCTGTGTGACATCAGAAGCTCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GTAEQVGAGAWD*RILCDIRSSWA
Trigger: GGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CCA 72 bp GTCTTGGCAATGATGGCTGTTGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGT +
Preference number: 3 (lower is better)
Translates to: VLAMMAVGWCLA*PKALHSSSTLC
Trigger: ACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR CCA 72 bp ACTGACCGAAACATAGCCAGATCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCGATGGAAACGCCGCAG +
Preference number: 3 (lower is better)
Translates to: TDRNIARSSRAI*EGPSSPMETPQ
Trigger: CTGCGGCGTTTCCATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 72 bp TCGTGCAGGGTCACCCCAGCCCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGGACCACCTTGGCTTGT +
Preference number: 3 (lower is better)
Translates to: SCRVTPAPITVT*SSLLFRTTLAC
Trigger: ACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGTGACCCTGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CCA 72 bp ATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCTAGAATGGCCACAAGG +
Preference number: 3 (lower is better)
Translates to: MSIWCCSGAGSL*PRRLMSRMATR
Trigger: CCTTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp CTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 3 (lower is better)
Translates to: LGLAKGLAQLLHAVSIHDVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...ATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR-3UTR CAA 90 bp CTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 3 (lower is better)
Translates to: LGLAKGLAQLLHAVSIHDPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...ATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp TTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATGCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 3 (lower is better)
Translates to: LAWPKALHSSSTLCPSTMLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...CATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp GCGTCCTCCTGTGGAGGGGTTGCCAGGATCTTCTTTTTGCTCTGGATCTGGCTGCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 3 (lower is better)
Translates to: ASSCGGVARIFFLLWIWLRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...CAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 3 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNEKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR TCA 72 bp GCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAAGGTTGTCCAGCTTAT +
Preference number: 3 (lower is better)
Translates to: AAVGPGHSGPGD*CLEWPQGCPAY
Trigger: ATAAGCTGGACAACCTTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR GCA 72 bp TCTTGTCCCCAACTTTGTAGCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCACTGAGGGTGCGTCCT +
Preference number: 3 (lower is better)
Translates to: SCPQLCSWAGWA*GCWQCPLRVRP
Trigger: AGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR GCA 72 bp CATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTaGAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCG +
Preference number: 3 (lower is better)
Translates to: HANLVKGPREEG*KSAAEGHRPVA
Trigger: CGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 72 bp CAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTaGACTGGACACAGCCTCACCAATGCCACCTTCATA +
Preference number: 3 (lower is better)
Translates to: QVGDSDARLAHY*TGHSLTNATFI
Trigger: TATGAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 72 bp CCTTGCGGGTGGCTATCTTGTCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGATGTTGGCAATGTCCA +
Preference number: 3 (lower is better)
Translates to: PCGWLSCPQLCS*AGWACGCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCACCCGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR CCA 72 bp CAAGGTTGTCCAGCTTATAGATGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCTCTGACAGCTCCCCGT +
Preference number: 3 (lower is better)
Translates to: QGCPAYRCWRRP*PPIQSPLTAPR
Trigger: ACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR-3UTR CAA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCGGTCGGGGCTGGAGCTaGGGACTGCAGAATTCTGTG +
Preference number: 3 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIGRGWS*GLQNSV
Trigger: CACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACC...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp AGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 3 (lower is better)
Translates to: RILPLVARALSRMSFLSREKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...CCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CAA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCC +
Preference number: 3 (lower is better)
Translates to: TACAMASLSIPNIFSSSAPQRLM*LSEMAA
Trigger: GGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CAA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCTCCAGCACGCGGATGTaGATCTTTTCTTGGCTTGTC +
Preference number: 3 (lower is better)
Translates to: SDARLAHYCTGHSLTNATSSTRM*IFSWLV
Trigger: GACAAGCCAAGAAAAGATCAACATCCGCGTGCTGGA...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
3UTR TCA 72 bp CACCAATGCCACCTTCATAATAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGA +
Preference number: 3 (lower is better)
Translates to: HQCHLHNNGPPR*GSCPWWHERCR
Trigger: TCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 72 bp CACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTaGGACTGCAGAATTCTGTGTGACATCAGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: HLGTAEQVGAGA*DCRILCDIRSS
Trigger: GGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CCA 72 bp TGGCTATCTTGTCCCCAACTTTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAATGTCCACTGAGGGTG +
Preference number: 3 (lower is better)
Translates to: WLSCPQLCSWAG*ACGCWQCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGATAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCCCTCTCAGTACATCTTaGAGCACCTTTCCCAGAATC +
Preference number: 3 (lower is better)
Translates to: SDARLAHYCTGHSLTNATPLSTS*STFPRI
Trigger: GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGG...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCACAGCTAGAAGGCAGGTaGCAGTCAAATGTCACCTGG +
Preference number: 3 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPQLEGR*QSNVTW
Trigger: CCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTG...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR GCA 72 bp GCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGATACCAAACATCTTCAG +
Preference number: 3 (lower is better)
Translates to: ALGLGDEAPHSL*NGIPVDTKHLQ
Trigger: CTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR CCA 72 bp TGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATaGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATC +
Preference number: 3 (lower is better)
Translates to: CVTSEAPGPVVT*SPRPHWQDPEI
Trigger: GATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp ACCAATGCCACCTTCATAATAATGGTCCTCCACGGTGAGGATCCTGCCCTTGGTCTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 3 (lower is better)
Translates to: TNATFIIMVLHGEDPALGLGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...ACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 3 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR GCA 72 bp TGTCTAGAATGGCCACAAGGTTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCTCCCATACAGAGCCCT +
Preference number: 3 (lower is better)
Translates to: CLEWPQGCPAYR*WRRPWPPIQSP
Trigger: AGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGTGGCCATTCTAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR CCA 72 bp AAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAGGTGGGTGACAGTGAT +
Preference number: 3 (lower is better)
Translates to: KHLQQLSRLPTS*YPVNCQVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
3UTR-3UTR CAA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCAGCTAGAAGGCAGGTaGCAGTCAAATGTCACCTGG +
Preference number: 3 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIQLEGR*QSNVTW
Trigger: CCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTG...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp AGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGTCCAGCACGCGGATGTaGATCTTTTCTTTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: RILPLVARALSRMSFLSRSSTRM*IFSFFS
Trigger: GCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGA...CCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
3UTR-3UTR CAA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACGTTCCACACTTGGGATaGAGGACCTCTCATGCCATC +
Preference number: 3 (lower is better)
Translates to: CHMESQAPLARPRNLHFNVPHLG*RTSHAI
Trigger: GATGGCATGAGAGGTCCTCAATCCCAAGTGTGGAAC...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp AGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGGATGTTGATCTTTTCTaGGCTTGTCCGACCTGGAAG +
Preference number: 3 (lower is better)
Translates to: SLCNGIPVDTKHLQQLSRDVDLF*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGAAAAGATCAACATC...CCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
3UTR CCA 72 bp ACAGGTTTATTCTCTCCAGACGGTCAGGAGGACAGGTaGACGTGTCCACAAATGTGTCTCATCCTCGCAACA +
Preference number: 3 (lower is better)
Translates to: TGLFSPDGQEDR*TCPQMCLILAT
Trigger: TGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAATAAACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGAGCACTAGTTTGTTCTaGGCCAGTATAAGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSESTSLF*ASIRFC
Trigger: GCAAAACCTTATACTGGCCAAGAACAAACTAGTGCT...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR GCA 72 bp CCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTaGACAGTTGACCTTATAAGCAGGGCTGACCCCAGC +
Preference number: 3 (lower is better)
Translates to: PSTSLFLASIRF*TVDLISRADPS
Trigger: GCTGGGGTCAGCCCTGCTTATAAGGTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR-3UTR CAA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTACCTCTCAGTACATCTTaGAGCACCTTTCCCAGAATC +
Preference number: 3 (lower is better)
Translates to: VVTWSPRPHWQDPEICILPLSTS*STFPRI
Trigger: GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGG...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR TCA 90 bp GGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGTGCGGCGCTGCAGCATaGCGTGGGGTGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGPESAWSASRLRQFPSPCGAAA*RGVARA
Trigger: GGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCA...CGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSAAKAS*RVTPAP
Trigger: CGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGC...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCGCTGCAGCATGACGTaGGGTGGCCAGAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: WGGPESAWSASRLRQFPSRCSMT*GGQSPP
Trigger: CGGCGGGCTCTGGCCACCCCACGTCATGCTGCAGCG...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCGGGACTTGGGGGAGGTaGGGCGGCCCTGAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSGTWGR*GGPESA
Trigger: GGCACTCTCAGGGCCGCCCCACCTCCCCCAAGTCCC...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 4 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: WGGPESAWSASRLRQFPSPHPGR*CGHWHG
Trigger: GCCATGCCAGTGACCGCATCATCGCCCTGGATGGGG...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCTGCCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: GTVLLRVAQPTAMLTMFCPHPGR*CGHWHG
Trigger: GCCATGCCAGTGACCGCATCATCGCCCTGGATGGGG...GCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGTCCTGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCCCTGCCCGTAGGCCTTaGGGGTGGCTATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GPGPGPRTPASLAHPPRFPARRP*GWLSCP
Trigger: GGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGG...GAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GMPTEGLAPLLVDVHLVLAAKAS*RVTPAP
Trigger: CGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGC...CAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR GCA 90 bp GGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGTGTTTCGGGACCGGGTaGCCGTCCAAGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GGPESAWSASRLRQFPSPCFGTG*PSKSEL
Trigger: CAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACA...CGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 4 (lower is better)
Translates to: PESAWSASRLRQFPSPLRPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...CCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGGAGGTGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCTGCCCGTAGGCCTTaGGGGTGGCTATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GRWGGPESAWSASRLRQFPARRP*GWLSCP
Trigger: GGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGG...GAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHRAPSC*GWHSPP
Trigger: CGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCT...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp GAAGTATTTGCCGGTGTAGGCCATCCCACAAGCGGCCCCGAGGCCCTGGCCCAGGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: EVFAGVGHPTSGPEALAQGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...CTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCTGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGTCCTGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GPGPGPRTPASLAHPPRFAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...GAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCTCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: WGGPESAWSASRLRQFPSSSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGTGCGGCGCTGCAGCATaGCGTGGGGTGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KARVKKAAKVLQKGTVLLCGAAA*RGVARA
Trigger: GGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCA...CAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: WGGPESAWSASRLRQFPSGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: TALRISWGLHQWPGHPALQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGCCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: QKGTVLLRVAQPTAMLTMPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...CATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTGCCGCAGTGGTGGCCTaGATGGAGCTGATACGTAGG +
Preference number: 4 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPAAVVA*MELIRR
Trigger: CCTACGTATCAGCTCCATCCAGGCCACCACTGCGGC...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: WGGPESAWSASRLRQFPSLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCGGGTGCGTCCTCCTGTaGAGGGGTTGCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPGCVLL*RGCQDL
Trigger: AAGATCCTGGCAACCCCTCCACAGGAGGACGCACCC...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCATGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GAWPGQRPCTAPPRCVHPWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...TGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp AGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 4 (lower is better)
Translates to: RWVTVMPGSPTTALDTASPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...TGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 4 (lower is better)
Translates to: ALGLGDEAPHSLCNGIPVPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCTGCGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: GTVLLRVAQPTAMLTMFCAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...GCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCTGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: WGGPESAWSASRLRQFPSCWRRP*PPIQSP
Trigger: AGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GAAGTATTTGCCGGTGTAGGCCATCCCACAAGCGGCCCCGAGGCCCTGGCCCAGTGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EVFAGVGHPTSGPEALAQCWRRP*PPIQSP
Trigger: AGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA...CTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GGGAGGTGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCGCTCAGGGCCAGGTaGACTGAGGTCACAATGAGG +
Preference number: 4 (lower is better)
Translates to: GRWGGPESAWSASRLRQFPLRAR*TEVTMR
Trigger: CCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGG...GAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCGGCCCTGAGAGTGCCTaGTCAGCTTCCAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSGPESA*SASRLR
Trigger: CCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCC...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCGGGCCAGTTGTCACATaGAGTCCCAGGCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSGPVVT*SPRPHW
Trigger: CCAATGGGGCCTGGGACTCCATGTGACAACTGGCCC...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGTGCGGCGCTGCAGCATaGCGTGGGGTGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PESQECIDPRPTLHTRPRCGAAA*RGVARA
Trigger: GGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCA...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTNGPPR*GSCPWW
Trigger: CCACCAAGGGCAGGATCCTCACCGTGGAGGACCATT...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KGTVLLRVAQPTAMLTMFNGPPR*GSCPWW
Trigger: CCACCAAGGGCAGGATCCTCACCGTGGAGGACCATT...GAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp GGCGATGATGCGGTCACTGGCATGGCCCAGCTTGGCCAGTGCCTGCCCGTAGGCCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GDDAVTGMAQLGQCLPVGRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...GCCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCATCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACCCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHPYRAL*QLPVSQ
Trigger: CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGG...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGGGCCAGGTGGACTaGGGTCACAATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPQGQVD*GHNEGC
Trigger: ACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTG...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCACAAAGCGGTCATTGTaGGGATTCCGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSTKRSL*GFRGSW
Trigger: CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGT...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCTGCACAAAGCGGTCATTGTaGGGATTCCGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTVLLRVAQPTAMLTMFCTKRSL*GFRGSW
Trigger: CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGT...GCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCTGCGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GTVLLRVAQPTAMLTMFCVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...GCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCCCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCCGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KGTVLLRVAQPTAMLTMFRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...GAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEAAKAS*RVTPAP
Trigger: CGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGC...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GGPESAWSASRLRQFPSPRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...CGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGCCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QKGTVLLRVAQPTAMLTMPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...CATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp GAAGTATTTGCCGGTGTAGGCCATCCCACAAGCGGCCCCGAGGCCCTGGCCCAGCCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: EVFAGVGHPTSGPEALAQPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...CTGGGCCAGGGCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCGGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: GPREEGCKSAAEGHRPVAGAGSL*PRRLMS
Trigger: AGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCC...CGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR CCA 90 bp CAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGGTTGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: QQLSRLPTSWYPVNCQVGWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...ACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCATGGGGACTCCACCAGTaGCCGGGGCACCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPWGLHQ*PGHPAL
Trigger: GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCA...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGTGGGGACTCCACCAGTaGCCGGGGCACCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGAGAWDCRILCDIRSSWWGLHQ*PGHPAL
Trigger: GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCA...CCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGGCTCTGAGGATTTCCTaGGGACTCCACCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PESAWSASRLRQFPSPLRALRIS*GLHQWP
Trigger: CGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGC...CCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: GMPTEGLAPLLVDVHLVLWPGWS*YVGGWP
Trigger: CGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCA...CAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR TCA 90 bp CAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: QKGTVLLRVAQPTAMLTMCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...CATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NAAVGAAEVDVALGDGGHGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...ATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp GCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGAAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AWPGQRPCTAPPRCVHPRNGPPR*GSCPWW
Trigger: CCACCAAGGGCAGGATCCTCACCGTGGAGGACCATT...TCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR GCA 90 bp GGTCCTGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: GPGPGPRTPASLAHPPRFCPAYR*WRRPWP
Trigger: AGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACA...GAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGCCCAGACCGCGTAGAGGATGGGAGCTGCATGGCCCTTGGAGAGCACAAAGCGCCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: SPDRVEDGSCMALGEHKAPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...CGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR GCA 90 bp CAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGGTTGTTTCGGGACCGGGTaGCCGTCCAAGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QQLSRLPTSWYPVNCQVGCFGTG*PSKSEL
Trigger: CAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACA...ACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GAAACCAGCTTCAGCCCAGACCGCGTAGAGGATGGGAGCTGCATGGCCCTTGGAGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: ETSFSPDRVEDGSCMALGGAGSL*PRRLMS
Trigger: AGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCC...TCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GAAAGCTTGTTTCGGGACCGGGTGCCCGTCCAAGTCGGAGCTGATCTTCCTCAGCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ESLFRDRVPVQVGADLPQHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...CTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp CTGAGGGTCCCTTTTCCCCCAGGACGAAGGCTGCCCTGTCTCTGCTTCTCTGAGGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: LRVPFPPGRRLPCLCFSEGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...CTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCGTAGGCCTTGCGGGTaGCTATCTTGTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSRRPCG*LSCPQL
Trigger: AAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACG...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCCCGTCTTCCCCGATaGAAACGCCGCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSEMAAMRIWSKARVKKARLPR*KRRSGS
Trigger: GCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC...CTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCTCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: SDARLAHYCTGHSLTNATSSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGGATGATGGCATTTTCTaGGCGGCTGGTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: GGPESAWSASRLRQFPSPDDGIF*AAGPDE
Trigger: TTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC...CGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCGGATCCTGCCCTTGGTaGCACGAGCGCTGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: WCLAWPKALHSSSTLCPSGSCPW*HERCRE
Trigger: TTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCC...GGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCGTCGGGGCTGGAGCTTaGGACTGCAGAATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSVGAGA*DCRILC
Trigger: ACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGAC...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CAA 72 bp TCCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATGGCGGCCATGCGAATC +
Preference number: 4 (lower is better)
Translates to: SPMETPQWEPQR*MLLSEMAAMRI
Trigger: GATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGTGCGGCGCTGCAGCATaGCGTGGGGTGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPCGAAA*RGVARA
Trigger: GGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCA...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: PESAWSASRLRQFPSPLRCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...CCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CAGCAGCTCCGCCTCGGCCAGGAAACCAGCTTCAGCCCAGACCGCGTAGAGGATTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: QQLRLGQETSFSPDRVEDCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...ATCCTCTACGCGGTCTGGGCTGAAGCTGGTTTCCTGGCCGAGGCGGAGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp AGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: RILPLVARALSRMSFLSRPHPGR*CGHWHG
Trigger: GCCATGCCAGTGACCGCATCATCGCCCTGGATGGGG...CCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp TGGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCCAATGTAGCACTCGATaGAGCGGTCCGGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: WCLAWPKALHSSSTLCPSQCSTR*SGPGAP
Trigger: AGGAGCACCCGGACCGCTTCATCGAGTGCTACATTG...GGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp AAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGTVLLRVAQPTAMLTMFRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...GAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp AGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: RWVTVMPGSPTTALDTASQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...TGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCAGGTCAGCTTCCAGACTaGGGCAGTTCCCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSGQLPD*GSSPAR
Trigger: GCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACC...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTCTGCAGAATTCTGTGTaGCATCAGAAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPLQNSV*HQKLLG
Trigger: GCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAG...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGAAGGAGGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AWPGQRPCTAPPRCVHPRRRRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTCCT...TCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR GCA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTCCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTCCTGCCCGTAGGCCTTaGGGGTGGCTATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGHANLVKGPREEGCKSAPARRP*GWLSCP
Trigger: GGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGG...AGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRRAPSC*GWHSPP
Trigger: CGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCT...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GMPTEGLAPLLVDVHLVLRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...CAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR GCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTAPHSL*NGIPVD
Trigger: ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGC...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCACAGAGATAGCGGCTaGTCCCGCGGCGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRHRDSG*SRGDRR
Trigger: CCGCCTGTCGCCGCGGGAGCAGCCGCTATCTCTGTG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTTGTTTCGGGACCGGGTaGCCGTCCAAGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GGHANLVKGPREEGCKSACFGTG*PSKSEL
Trigger: CAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACA...AGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTGACAGCTCCCCGTCTCAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: CWRRPWPPIQSPLTAPRLRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...GAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCACATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTGCAGAATTCTCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPRNSRAGRGWSLGLQNSHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...AGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACGTCGGTGAAAGCTTGTTTCGGGACCGGGTGCCCGTCCAAGTCGGAGCTGATCCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TSVKACFGTGCPSKSELILLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...GATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EGLAPLLVDVHLVLQWGRMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...CCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR CCA 90 bp CCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGAATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PQWEPQRLMLLSEMAAMRMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...TCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CTGAGGGTCCCTTTTCCCCCAGGACGAAGGCTGCCCTGTCTCTGCTTCTCTGAGGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRVPFPPGRRLPCLCFSEGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...CTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCGGGTGCGTCCTCCTGTaGAGGGGTTGCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: DSDARLAHYCTGHSLTNAGCVLL*RGCQDL
Trigger: AAGATCCTGGCAACCCCTCCACAGGAGGACGCACCC...GGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTWACGC*QCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCA...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAGCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: LQVIPRGLGTPRSWPRTKPQLCS*AGWACG
Trigger: TCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGG...CTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGATGCGGTCACTGGCATaGCCCAGCTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LLSEMAAMRIWSKARVKKMRSLA*PSLASA
Trigger: GGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCAT...CTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCCCGTCTTCCCCGATaGAAACGCCGCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KGPREEGCKSAAEGHRPVARLPR*KRRSGS
Trigger: GCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC...AACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCTTCGGATCCTGCCCTTGGTaGCACGAGCGCTGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: DARLAHYCTGHSLTNATFGSCPW*HERCRE
Trigger: TTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCC...GAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCGGGACTTGGGGGAGGTaGGGCGGCCCTGAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIGTWGR*GGPESA
Trigger: GGCACTCTCAGGGCCGCCCCACCTCCCCCAAGTCCC...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGGAGGTGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCGGTCAGGAGGACAGGTaGACGTGTCCACAAATGTGT +
Preference number: 4 (lower is better)
Translates to: GRWGGPESAWSASRLRQFGQEDR*TCPQMC
Trigger: ACACATTTGTGGACACGTCCACCTGTCCTCCTGACC...GAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: NAAVGAAEVDVALGDGGHCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...ATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACCCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp GCTGTGTCCATCCACGATGATGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: AVSIHDDGMPTEGLAPLLGQRPA*RRLQKC
Trigger: GCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACC...CAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCATCATCGTGGATGGACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp GACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: DSDARLAHYCTGHSLTNAGQRPA*RRLQKC
Trigger: GCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACC...GGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp TATAGATGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTGACAGCTCCCCAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: YRCWRRPWPPIQSPLTAPQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...GGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp CTGGCCCAGGGAGCCAGTGGCCACGTCGGTGAAAGCTTGTTTCGGGACCGGGTGGGGGTGGTATTTCTATaGACTCCCGGTCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: LAQGASGHVGESLFRDRVGVVFL*TPGHGK
Trigger: TTTCCCATGACCGGGAGTTCATAGAAATACCACCCC...CACCCGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTGGCTCCCTGGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp GGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGTGCGGCGCTGCAGCATaGCGTGGGGTGGTATTTCTA +
Preference number: 4 (lower is better)
Translates to: GMPTEGLAPLLVDVHLVLCGAAA*RGVVFL
Trigger: TAGAAATACCACCCCACGTCATGCTGCAGCGCCGCA...CAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR GCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGGTGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QQLSRLPTSWYPVNCQVGVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...ACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGCCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: EGLAPLLVDVHLVLQWGRPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...CCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR GCA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: EGLAPLLVDVHLVLQWGRCPAYR*WRRPWP
Trigger: AGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACA...CCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR GCA 90 bp GGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: GDGGHANLVKGPREEGCKMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...TTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAATGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQWAGWA*GCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCA...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CGCAACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: RNSSEDFLGTPPVAGAPSMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...GCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGTTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TGGTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCAGAAGGCTGCAAAAGTaGTGCAGAAGGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: WCLAWPKALHSSSTLCPSRRLQK*CRRAPS
Trigger: GGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCT...GGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR GCA 90 bp AAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCTCACCTGGTCATCCTTaGTCTTCAGGACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: KGTVLLRVAQPTAMLTMFSPGHP*SSGPPW
Trigger: CCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGA...GAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR GCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTWYPVN*QVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCA...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCACAGAGATAGCGGCTaGTCCCGCGGCGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPHRDSG*SRGDRR
Trigger: CCGCCTGTCGCCGCGGGAGCAGCCGCTATCTCTGTG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTTTCTTCCCCAGAACCTaGACTGGCTGCAAACACATC +
Preference number: 4 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPFFPRT*TGCKHI
Trigger: GATGTGTTTGCAGCCAGTGCAGGTTCTGGGGAAGAA...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR CCA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCGCAGTGGTGGCCTaGATGGAGCTGATACGTAGG +
Preference number: 4 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNAAVVA*MELIRR
Trigger: CCTACGTATCAGCTCCATCCAGGCCACCACTGCGGC...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGCTGCAGCATGACGTaGGGTGGCCAGAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYRCSMT*GGQSPP
Trigger: CGGCGGGCTCTGGCCACCCCACGTCATGCTGCAGCG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGCTGCAGCATGACGTaGGGTGGCCAGAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSRCSMT*GGQSPP
Trigger: CGGCGGGCTCTGGCCACCCCACGTCATGCTGCAGCG...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp ACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: TALRISWGLHQWPGHPALGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: NAAVGAAEVDVALGDGGHRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...ATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LQQLSRLPTSWYPVNCQVGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...CACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAGGGTGCGTCCTCCTGTaGAGGGGTTGCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: GDGGHANLVKGPREEGCKGCVLL*RGCQDL
Trigger: AAGATCCTGGCAACCCCTCCACAGGAGGACGCACCC...TTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GAGGGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTTGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: EGQQASEPPYPRRPDCKAWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...AGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTAGAAGGTGGAATTTTTaGTGTCCCCATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPRRWNF*CPHPGR
Trigger: TCGCCCTGGATGGGGACACCAAAAATTCCACCTTCT...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCGATGATGGCATTTTCTaGGCGGCTGGTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTDDGIF*AAGPDE
Trigger: TTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CAA 72 bp ATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: METPQWEPQRLM*LSEMAAMRIWS
Trigger: TGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTATGCGGCGCTGCAGCATaGCGTGGGGTGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILCGAAA*RGVARA
Trigger: GGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCA...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGLELGTAEFCVTSEAPGVGNVH*GCVLLW
Trigger: CCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC...CCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPHPGR*CGHWHG
Trigger: GCCATGCCAGTGACCGCATCATCGCCCTGGATGGGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTPHPGR*CGHWHG
Trigger: GCCATGCCAGTGACCGCATCATCGCCCTGGATGGGG...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATCAATGTAGCACTCGATaGAGCGGTCCGGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNQCSTR*SGPGAP
Trigger: AGGAGCACCCGGACCGCTTCATCGAGTGCTACATTG...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCGGCGGCTGGTCCGGATaGAGCAGATACCCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SDARLAHYCTGHSLTNATGGWSG*SRYPLY
Trigger: ATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCC...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp ACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCCAGCACGCGGATGTTaGTCTTTTCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TALRISWGLHQWPGHPALPARGC*SFLSSA
Trigger: TGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGG...GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATGATGGCGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LAKGLAQLLHAVSIHDDGERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...GCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCAAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSNGPPR*GSCPWW
Trigger: CCACCAAGGGCAGGATCCTCACCGTGGAGGACCATT...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GQEDRWTCPQMCLILATAPYRAL*QLPVSQ
Trigger: CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGG...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGGGCTTGATGGTGAACCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGTSAVENEFSVQGLDGEPYRAL*QLPVSQ
Trigger: CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGG...TTCACCATCAAGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR TCA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCGAGGGCAGTTGCAGGTaGTTCCAAGGGGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVEGSCR*FQGDLG
Trigger: TCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTC...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGCCTTATAAGCAGGGCTaGCCCCAGCTGAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEPYKQG*PQLSPS
Trigger: GCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGG...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTAGCTACTCGGGAGGCTaGGGCAGGAGGAGAATCACT +
Preference number: 4 (lower is better)
Translates to: WHANRRPRTASGRCPSGASYSGG*GRRRIT
Trigger: AGTGATTCTCCTCCTGCCTCAGCCTCCCGAGTAGCT...AGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR GCA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: SGLELGTAEFCVTSEAPGMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...CCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR GCA 90 bp ACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TALRISWGLHQWPGHPALISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSRAPSC*GWHSPP
Trigger: CGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCT...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYRAPSC*GWHSPP
Trigger: CGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCT...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLRAPSC*GWHSPP
Trigger: CGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCT...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCAGGGCACCGTCCTGTTaGGGGTGGCACAGCCCACCG +
Preference number: 4 (lower is better)
Translates to: TACAMASLSIPNIFSSSARAPSC*GWHSPP
Trigger: CGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCT...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQRLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CTGAGGGTCCCTTTTCCCCCAGGACGAAGGCTGCCCTGTCTCTGCTTCTCTGAGAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LRVPFPPGRRLPCLCFSERLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...CTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PDGNAAVGAAEVDVALGDRLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...ATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCAGAAGGCTGCAAAAGTaGTGCAGAAGGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: SDARLAHYCTGHSLTNATRRLQK*CRRAPS
Trigger: GGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCT...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: SDARLAHYCTGHSLTNATAPHSL*NGIPVD
Trigger: ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGC...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGTGTTTCGGGACCGGGTaGCCGTCCAAGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQCFGTG*PSKSEL
Trigger: CAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACA...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGGCCGCAGTGGTGGCCTaGATGGAGCTGATACGTAGG +
Preference number: 4 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRAAVVA*MELIRR
Trigger: CCTACGTATCAGCTCCATCCAGGCCACCACTGCGGC...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCTGTGTCCATCCACGATGATGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: AVSIHDDGMPTEGLAPLLELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...CAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCATCATCGTGGATGGACACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR CCA 90 bp AAGGGGTCCAGCACGCGGATGTTGATCTTTTCTTGGCTTGTCCGACCTGGAAGTCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KGSSTRMLIFSWLVRPGSHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...ACTTCCAGGTCGGACAAGCCAAGAAAAGATCAACATCCGCGTGCTGGACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp GAGGGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: EGQQASEPPYPRRPDCKAGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...AGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KGPREEGCKSAAEGHRPVLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...AACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: IWCCSGAGSLWPRRLMSRMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...TCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp CAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCTACTGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLPVSQQAIDSVAVVPATGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...AGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCTTCTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DARLAHYCTGHSLTNATFWACGC*QCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCA...GAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LQQLSRLPTSWYPVNCQVCSWAG*ACGCWQ
Trigger: TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACA...CACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCACCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPPQLCS*AGWACG
Trigger: TCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGG...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GATCTTTTCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTGCAGGGTCACCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: DLFFLQQFGSGQGLVQGHPQLCS*AGWACG
Trigger: TCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGG...GTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp AAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: KGPREEGCKSAAEGHRPVPQLCS*AGWACG
Trigger: TCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGG...AACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCCGTAGGCCTTGCGGGTaGCTATCTTGTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: DSDARLAHYCTGHSLTNARRPCG*LSCPQL
Trigger: AAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACG...GGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGATGCGGTCACTGGCATaGCCCAGCTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: QEDRWTCPQMCLILATALMRSLA*PSLASA
Trigger: GGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCAT...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCGCCCGTCTTCCCCGATaGAAACGCCGCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIARLPR*KRRSGS
Trigger: GCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGGGATCCTGCCCTTGGTaGCACGAGCGCTGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRGSCPW*HERCRE
Trigger: TTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCC...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATTGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGLGDEAPHSLCNGIPVDCWRRP*PPIQSP
Trigger: AGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA...ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp TCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTGCAGAATTCTGGGCCAGTTGTCACATaGAGTCCCAGGCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: SPRNSRAGRGWSLGLQNSGPVVT*SPRPHW
Trigger: CCAATGGGGCCTGGGACTCCATGTGACAACTGGCCC...AGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTGACAGCTCCCCGTCTCGAGCGAGACTCCATCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: CWRRPWPPIQSPLTAPRLERDSI*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGATGGAGTCTCGCTC...GAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTWPGWS*YVGGWP
Trigger: CGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCA...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: PVDTKHLQQLSRLPTSWYWPGWS*YVGGWP
Trigger: CGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCA...GTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp TTCTACCCCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCAATGATGGCTGTTGGAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FYPRDPSALEGLGNDGCWKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...CCAACAGCCATCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR TCA 90 bp TTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATGTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAA +
Preference number: 4 (lower is better)
Translates to: LAWPKALHSSSTLCPSTMSGPGD*CLEWPQ
Trigger: TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGA...CATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQVGNVH*GCVLLW
Trigger: CCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGCAATGTAGCACTCGATaGAGCGGTCCGGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRQCSTR*SGPGAP
Trigger: AGGAGCACCCGGACCGCTTCATCGAGTGCTACATTG...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTGCAGAATTCTGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SPRNSRAGRGWSLGLQNSGQRPA*RRLQKC
Trigger: GCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACC...AGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRNGPPR*GSCPWW
Trigger: CCACCAAGGGCAGGATCCTCACCGTGGAGGACCATT...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGCAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCTGTGGTCAGCAGTGTaGGGGCAGTCACCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SGLELGTAEFCVTSEAPGLWSAV*GQSPRN
Trigger: GTTCCTAGGTGACTGCCCTCACACTGCTGACCACAG...CCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TTCTACCCCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCAATGATGGCTGTTGGGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: FYPRDPSALEGLGNDGCWVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...CCAACAGCCATCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR GCA 90 bp CTGAGGGTCCCTTTTCCCCCAGGACGAAGGCTGCCCTGTCTCTGCTTCTCTGAGTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: LRVPFPPGRRLPCLCFSECPAYR*WRRPWP
Trigger: AGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACA...CTCAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGGGAAAAGGGACCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGCCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QKGTVLLRVAQPTAMLTMPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...CATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp CCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: PQRLMLLSEMAAMRIWSKWAGWA*GCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCA...CTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTGCCCGTAGGCCTTaGGGGTGGCTATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPARRP*GWLSCP
Trigger: GGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: WHANRRPRTASGRCPSGAAPHSL*NGIPVD
Trigger: ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGC...AGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGCCGCAGTGGTGGCCTaGATGGAGCTGATACGTAGG +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRAAVVA*MELIRR
Trigger: CCTACGTATCAGCTCCATCCAGGCCACCACTGCGGC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCAATAGACTCGGTAGCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPNRLGS*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGCTACCGAGTCTATT...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPGAGSL*PRRLMS
Trigger: AGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIGAGSL*PRRLMS
Trigger: AGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCC...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QEDRWTCPQMCLILATALGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCATGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPCSWAG*ACGCWQ
Trigger: TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACA...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PESQECIDPRPTLHTRPRCSWAG*ACGCWQ
Trigger: TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACA...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTATGCGGTCACTGGCATaGCCCAGCTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ASLSIPNIFSSSAGFPLLMRSLA*PSLASA
Trigger: GGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCAT...AAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAGCCCGTCTTCCCCGATaGAAACGCCGCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSARLPR*KRRSGS
Trigger: GCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGGCCCGTCTTCCCCGATaGAAACGCCGCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLARLPR*KRRSGS
Trigger: GCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTTCAGATACCCTTTGTATTaGCGGCTAGTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: KGTVLLRVAQPTAMLTMFRYPLY*RLVPLP
Trigger: AGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCT...GAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGGAGGTGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCTTGGCTTGTCCGACCTaGAAGTCCTCATTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GRWGGPESAWSASRLRQFLACPT*KSSLLL
Trigger: TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAA...GAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTCGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GGHANLVKGPREEGCKSARLPTS*YPVNCQ
Trigger: CTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCG...AGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VRRTGGRVHKCVSSSQQLCWRRP*PPIQSP
Trigger: AGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA...GAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGGATTCCAAGGGGACTTaGGACACCCAGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QEDRWTCPQMCLILATALDSKGT*DTQVLA
Trigger: GGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATC...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCCGCTCAGGGCCAGGTaGACTGAGGTCACAATGAGG +
Preference number: 4 (lower is better)
Translates to: GQEDRWTCPQMCLILATAPLRAR*TEVTMR
Trigger: CCTCATTGTGACCTCAGTCCACCTGGCCCTGAGCGG...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAGACATCAGAAGCTCCTaGGCCAGTTGTCACATGGAG +
Preference number: 4 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQDIRSS*ASCHME
Trigger: CTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTC...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGCTCTGAGGATTTCCTaGGGACTCCACCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEALRIS*GLHQWP
Trigger: CGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGC...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CAA 72 bp TTGAAGGTCTTGGCAATGATGGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: LKVLAMMAVGWC*AWPKALHSSST
Trigger: CGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCCAAGACCTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
3UTR CAA 72 bp TGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACAAGGTTGTCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: CCSGAGSLWPRR*MSRMATRLSSL
Trigger: TAAGCTGGACAACCTTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSWPGWS*YVGGWP
Trigger: CGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCA...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: CRILCDIRSSWASCHMESWPGWS*YVGGWP
Trigger: CGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCA...GGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTCAATGTAGCACTCGATaGAGCGGTCCGGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGAWDCRILCDIRSSWASQCSTR*SGPGAP
Trigger: AGGAGCACCCGGACCGCTTCATCGAGTGCTACATTG...ACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GQQASEPPYPRRPDCKAVGQRPA*RRLQKC
Trigger: GCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACC...CACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGGCGGCTGGTCCGGATaGAGCAGATACCCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPGGWSG*SRYPLY
Trigger: ATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCC...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGACATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PQWEPQRLMLLSEMAAMRHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...TCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PESQECIDPRPTLHTRPRERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp CAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCTACTCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLPVSQQAIDSVAVVPATRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...AGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGAGGGCAGTTGCAGGTaGTTCCAAGGGGACTTGGGA +
Preference number: 4 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEEGSCR*FQGDLG
Trigger: TCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTC...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCAGGGCCAGGTGGACTaGGGTCACAATGAGGGATGT +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQQGQVD*GHNEGC
Trigger: ACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTG...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCTAGTTAAAAGGATATaGCAAGGACGAGGGACAACA +
Preference number: 4 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPLVKRI*QGRGTT
Trigger: TGTTGTCCCTCGTCCTTGTCATATCCTTTTAACTAG...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTGTGGTCAGCAGTGTaGGGGCAGTCACCTAGGAAC +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQLWSAV*GQSPRN
Trigger: GTTCCTAGGTGACTGCCCTCACACTGCTGACCACAG...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTTCCTCGCAACAGCTCTaGGGATTTCCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GQEDRWTCPQMCLILATASSQQL*GFPGDS
Trigger: GGAGTCCCCAGGAAATCCTCAGAGCTGTTGCGAGGA...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GATCTGGCTGTAGATCTCCTGGATGATCTGCTCAGCCATGTTTTTGGGGAGGGGATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: DLAVDLLDDLLSHVFGEGMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...CCCCTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR GCA 90 bp GCTAGAAGGCAGGTTGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGACCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: ARRQVAVKCHLVMNGRQRPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...TCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCGATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: GPREEGCKSAAEGHRPVAISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...CGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRWAGWA*GCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCA...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: VRRTGGRVHKCVSSSQQLWAGWA*GCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCA...GAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RILPLVARALSRMSFLSRRLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...CCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GCTAGAAGGCAGGTTGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGACGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ARRQVAVKCHLVMNGRQRRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...TCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCTCACCTGGTCATCCTTaGTCTTCAGGACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVSPGHP*SSGPPW
Trigger: CCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGA...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVWYPVN*QVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCA...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACTGTTTCGGGACCGGGTaGCCGTCCAAGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYCFGTG*PSKSEL
Trigger: CAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACA...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCCCCAGGACGAAGGCTaGCCTGTCTCTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTPQDEG*PVSASL
Trigger: CAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGG...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGCCGCAGTGGTGGCCTaGATGGAGCTGATACGTAGG +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTAAVVA*MELIRR
Trigger: CCTACGTATCAGCTCCATCCAGGCCACCACTGCGGC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGGTGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: QQLSRLPTSWYPVNCQVGGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...ACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GAAACCAGCTTCAGCCCAGACCGCGTAGAGGATGGGAGCTGCATGGCCCTTGGAGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: ETSFSPDRVEDGSCMALGGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...TCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: PESQECIDPRPTLHTRPRELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: PQRLMLLSEMAAMRIWSKRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...CTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGCCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: TACAMASLSIPNIFSSSAGAGSL*PRRLMS
Trigger: AGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCC...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTGGTGCTTGGCCTaGCCAAAGGCCTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: TACAMASLSIPNIFSSSAGWCLA*PKALHS
Trigger: GCTGTGCAAGGCCTTTGGCCAGGCCAAGCACCAGCC...GGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLCNGIPVDTKHLQQLSRGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...CCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGGGTGCGTCCTCCTGTaGAGGGGTTGCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPGCVLL*RGCQDL
Trigger: AAGATCCTGGCAACCCCTCCACAGGAGGACGCACCC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGLELGTAEFCVTSEAPGWACGC*QCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCA...CCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTPQLCS*AGWACG
Trigger: TCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGG...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACATGCGGTCACTGGCATaGCCCAGCTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYMRSLA*PSLASA
Trigger: GGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCAT...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAGGGGTCCAGCACGCGGATGTTGATCTTTTCTTGGCTTGTCCGACCTGGAAGTGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: KGSSTRMLIFSWLVRPGSAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...ACTTCCAGGTCGGACAAGCCAAGAAAAGATCAACATCCGCGTGCTGGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGTGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRCCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGTGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: PESQECIDPRPTLHTRPRCCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCTCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSSSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGGATCCTGCCCTTGGTaGCACGAGCGCTGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTGSCPW*HERCRE
Trigger: TTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCACGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPRLPTS*YPVNCQ
Trigger: CTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCG...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGCGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: PQRLMLLSEMAAMRIWSKRLPTS*YPVNCQ
Trigger: CTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCG...CTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp GCTAGAAGGCAGGTTGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGAGGCCCTGAGAGTGCCTaGTCAGCTTCCAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: ARRQVAVKCHLVMNGRQRGPESA*SASRLR
Trigger: CCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCC...TCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTGCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACATGAACTCCCGGTCATaGGAAAAGACACTACACCCA +
Preference number: 4 (lower is better)
Translates to: VLGLAKGLAQLLHAVSIHMNSRS*EKTLHP
Trigger: TGGGTGTAGTGTCTTTTCCCATGACCGGGAGTTCAT...GTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR CAA 72 bp CCCGCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTCGATACCAAACATCTT +
Preference number: 4 (lower is better)
Translates to: PALGLGDEAPHS*CNGIPVDTKHL
Trigger: AAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp ACCAATGCCACCTTCATAATAATGGTCCTCCACGGTGAGGATCCTGCCCTTGGTGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TNATFIIMVLHGEDPALGVGNVH*GCVLLW
Trigger: CCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC...ACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCAATGTAGCACTCGATaGAGCGGTCCGGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPQCSTR*SGPGAP
Trigger: AGGAGCACCCGGACCGCTTCATCGAGTGCTACATTG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGGTCAAAGGCCCGCGTaGAGAAGGCTGCAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTGQRPA*RRLQKC
Trigger: GCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGGCGGCTGGTCCGGATaGAGCAGATACCCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRGGWSG*SRYPLY
Trigger: ATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCTTGGCCTGGCCAAAGGCCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGACTCTCAGTACATCTTTaGGCACCTTTCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: AWPGQRPCTAPPRCVHPRLSVHL*APFPES
Trigger: AGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAG...TCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTACCTTATAAGCAGGGCTaGCCCCAGCTGAGCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILPYKQG*PQLSPS
Trigger: GCTCGGGCTCAGCTGGGGTCAGCCCTGCTTATAAGG...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGACAAAGCGGTCATTGTaGGGATTCCGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPTKRSL*GFRGSW
Trigger: CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGT...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGTAGAGGATGGGAGCTaGATGGCCCTTGGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPVEDGS*MALGEH
Trigger: GTGCTCTCCAAGGGCCATGCAGCTCCCATCCTCTAC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCACCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCACCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GCCACCTTCATAATAATGGTCCTCCACGGTGAGGATCCTGCCCTTGGTGGCACGCCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: ATFIIMVLHGEDPALGGTPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...CGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCAGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCTTCATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: DARLAHYCTGHSLTNATFISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...GAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GAAACCAGCTTCAGCCCAGACCGCGTAGAGGATGGGAGCTGCATGGCCCTTGGAATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ETSFSPDRVEDGSCMALGISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...TCCAAGGGCCATGCAGCTCCCATCCTCTACGCGGTCTGGGCTGAAGCTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR GCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTWAGWA*GCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCA...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTAGAAGGCTGCAAAAGTaGTGCAGAAGGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: GQEDRWTCPQMCLILATARRLQK*CRRAPS
Trigger: GGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCT...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTAGAAGGCTGCAAAAGTaGTGCAGAAGGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: AGAWDCRILCDIRSSWASRRLQK*CRRAPS
Trigger: GGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCT...ACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTCGGAGATGGCGGCCATaGGAATCTGGTCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFRRWRP*ESGQRP
Trigger: GGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCG...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLAAKAS*RVTPAP
Trigger: CGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGC...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISAAKAS*RVTPAP
Trigger: CGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGC...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGACACAGAGATAGCGGCTaGTCCCGCGGCGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGHRDSG*SRGDRR
Trigger: CCGCCTGTCGCCGCGGGAGCAGCCGCTATCTCTGTG...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR GCA 90 bp TGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCTTCTTCCCCAGAACCTaGACTGGCCGCCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: CRILCDIRSSWASCHMESFFPRT*TGRPRP
Trigger: AGGCCTAGGGCGGCCAGTGCAGGTTCTGGGGAAGAA...GGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423525.6
CDS-3UTR GCA 90 bp CAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGCCTGCCCGTAGGCCTTaGGGGTGGCTATTTTGTACC +
Preference number: 4 (lower is better)
Translates to: QLVQWHPCRYQTSSAAQPPARRP*GWLFCT
Trigger: GGTACAAAATAGCCACCCGCAAGGCCTACGGGCAGG...CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAATGTCCACTGAGGGTGCGTCCTCCTGTGGAGGGGTTGCCAGGATCTTCTTTTGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: QCPLRVRPPVEGLPGSSFELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...AAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR CCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCT +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILGAGSL*PRRLMS
Trigger: AGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCC...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTGGGTGCGTCCTCCTGTaGAGGGGTTGCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFGCVLL*RGCQDL
Trigger: AAGATCCTGGCAACCCCTCCACAGGAGGACGCACCC...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGCGTAGGCCTTGCGGGTaGCTATCTTGTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: GQQASEPPYPRRPDCKAVRRPCG*LSCPQL
Trigger: AAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACG...CACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCAGAAGGTGGAATTTTTaGTGTCCCCATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVRRWNF*CPHPGR
Trigger: TCGCCCTGGATGGGGACACCAAAAATTCCACCTTCT...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGAGAAGGTGGAATTTTTaGTGTCCCCATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LQQLSRLPTSWYPVNCQVRRWNF*CPHPGR
Trigger: TCGCCCTGGATGGGGACACCAAAAATTCCACCTTCT...CACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAGCGGCCATGCGAATCTaGTCAAAGGCCCGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSAAMRI*SKARVK
Trigger: CTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGC...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGTGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWCCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTATCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILSSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTCTTCCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCAGATACCCTTTGTATTaGCGGCTAGTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: VFPDGNAAVGAAEVDVALRYPLY*RLVPLP
Trigger: AGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCT...GAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGLELGTAEFCVTSEAPGPITVT*SSLLFR
Trigger: CCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGG...CCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACGGATCCTGCCCTTGGTaGCACGAGCGCTGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYGSCPW*HERCRE
Trigger: TTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCC...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGGTCGGGGCTGGAGCTTaGGACTGCAGAATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWVGAGA*DCRILC
Trigger: ACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGAC...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGCGTAGGCCTTGCGGGTaGCTATTTTGTACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PESQECIDPRPTLHTRPRRRPCG*LFCTLS
Trigger: GGACAAGGTACAAAATAGCCACCCGCAAGGCCTACG...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp GCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCTACTCGCGCTGCAGCATGACGTaGGGTGGTATTTCTATGAAC +
Preference number: 4 (lower is better)
Translates to: APRLPASNRLGSCSPSYSRCSMT*GGISMN
Trigger: GTTCATAGAAATACCACCCCACGTCATGCTGCAGCG...CGAGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
3UTR CAA 72 bp CAATGTCCACTGAGGGTGCGTCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGCTCTGGATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QCPLRVRPPVEG*PGSSFCSGSGC
Trigger: ACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTGCGGCGCTGCAGCATaGCGTGGGGTGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLCGAAA*RGVARA
Trigger: GGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCA...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CTGGATCTGGCTGTAGATCTCCTGGATGATCTGCTCAGCCATGTTTTTGGGGAGAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LDLAVDLLDDLLSHVFGEKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...CTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR TCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAA +
Preference number: 4 (lower is better)
Translates to: GQEDRWTCPQMCLILATASGPGD*CLEWPQ
Trigger: TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGA...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAA +
Preference number: 4 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWSGPGD*CLEWPQ
Trigger: TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGA...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAGTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LQVIPRGLGTPRSWPRTKCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...CTTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ATGATGGCATTTTCTGGGCGGCTGGTCCGGATGAAGCAGATACCCTTTGTATTGGGGAGCCGCAGAGGTTaGTGTTGCTCTCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: MMAFSGRLVRMKQIPFVLGSRRG*CCSRRW
Trigger: CCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCC...CAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGGCGGCTGGTCCGGATaGAGCAGATACCCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPGGWSG*SRYPLY
Trigger: ATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACCCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDPYRAL*QLPVSQ
Trigger: CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGG...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGAGGTCAGCTTCCAGACTaGGGCAGTTCCCCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGGQLPD*GSSPAR
Trigger: GCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACC...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACACAAAGCGGTCATTGTaGGGATTCCGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYTKRSL*GFRGSW
Trigger: CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGT...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ATGATGGCATTTTCTGGGCGGCTGGTCCGGATGAAGCAGATACCCTTTGTATTGATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: MMAFSGRLVRMKQIPFVLMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...CAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTRLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGAGGCTGCAAAAGTGCTaGAGAAGGGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPRLQKC*RRAPSC
Trigger: ACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCT...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGTCACCTGGTCATCCTTaGTCTTCAGGACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQSPGHP*SSGPPW
Trigger: CCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGA...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPAPHSL*NGIPVD
Trigger: ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTACCCCAGGACGAAGGCTaGCCTGTCTCTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILPQDEG*PVSASL
Trigger: CAGAGAAGCAGAGACAGGGCAGCCTTCGTCCTGGGG...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: KGPREEGCKSAAEGHRPVGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...AACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGGTAATAGACTCGGTAGCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: QQLSRLPTSWYPVNCQVGNRLGS*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGCTACCGAGTCTATT...ACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LVMRPLTACAMASLSIPNWACGC*QCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCA...GTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSCSWAG*ACGCWQ
Trigger: TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACA...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GATGATGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGAGAAGGTGGAATTTTTaGTGTCCCCATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: DDGMPTEGLAPLLVDVHLRRWNF*CPHPGR
Trigger: TCGCCCTGGATGGGGACACCAAAAATTCCACCTTCT...CAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp GCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTTGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: ASLSIPNIFSSSAGFPLLCCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...AAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CRILCDIRSSWASCHMESMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...GGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCTTCTTGGCTTGTCCGACCTaGAAGTCCTCATTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: DARLAHYCTGHSLTNATFLACPT*KSSLLL
Trigger: TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAA...GAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGTCTTCAGGACCACCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QEDRWTCPQMCLILATALSSGPP*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGA...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GAGGGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EGQQASEPPYPRRPDCKAPITVT*SSLLFR
Trigger: CCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGG...AGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAGGCAGGTTGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGATAGTTGGATCCTGCCCTTGGTaGCACGAGCGCTGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: KAGCSQMSPGDEWEAAIVGSCPW*HERCRE
Trigger: TTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCC...AACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAATCACAGCTTGTGCAATaGCATCCCTGTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: GDGGHANLVKGPREEGCKSQLVQ*HPCRYQ
Trigger: TTGGTATCGACAGGGATGCCATTGCACAAGCTGTGA...TTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTAGAGCAGGTCGGGGCTaGAGCTTGGGACTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFRAGRG*SLGLQN
Trigger: ATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCT...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ATGATGGCATTTTCTGGGCGGCTGGTCCGGATGAAGCAGATACCCTTTGTATTGAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MMAFSGRLVRMKQIPFVLKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...CAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp CCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAA +
Preference number: 4 (lower is better)
Translates to: PVDTKHLQQLSRLPTSWYSGPGD*CLEWPQ
Trigger: TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGA...GTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR TCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAGGCGGCTGGTCCGGATaGAGCAGATACCCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSGGWSG*SRYPLY
Trigger: ATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCC...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: CRILCDIRSSWASCHMESRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...GGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTATCCTCGCAACAGCTCTaGGGATTTCCTGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILSSQQL*GFPGDS
Trigger: GGAGTCCCCAGGAAATCCTCAGAGCTGTTGCGAGGA...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCCAGCACGCGGATGTTaGTCTTTTCTTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SLCNGIPVDTKHLQQLSRPARGC*SFLGLS
Trigger: GGACAAGCCAAGAAAAGATCAACATCCGCGTGCTGG...CCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR GCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACCCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: LVMRPLTACAMASLSIPNPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...GTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGCCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLSEMAAMRIWSKARVKKPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...CTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACACAGCCTCACCAATaGCACCTTCATAATAATGGT +
Preference number: 4 (lower is better)
Translates to: DSDARLAHYCTGHSLTNATQPHQ*HLHNNG
Trigger: ACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGT...GGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp CAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: QLVQWHPCRYQTSSAAQPWYPVN*QVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCA...CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp GGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGCTGGAGCTTGGGACTaGAGAATTCTGTGTGACATC +
Preference number: 4 (lower is better)
Translates to: GQQASEPPYPRRPDCKAVAGAWD*RILCDI
Trigger: GATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGC...CACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCGCTGCAGCATGACGTaGGGTGGCCAGAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIRCSMT*GGQSPP
Trigger: CGGCGGGCTCTGGCCACCCCACGTCATGCTGCAGCG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: GQQASEPPYPRRPDCKAVGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...CACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: CRILCDIRSSWASCHMESRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...GGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAATGATGGCTGTTGGCTaGTGCTTGGCCTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSMMAVG*CLAWPK
Trigger: CTTTGGCCAGGCCAAGCACCAGCCAACAGCCATCAT...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTWACGC*QCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCA...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGATGATGGCATTTTCTaGGCGGCTGGTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPDDGIF*AAGPDE
Trigger: TTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGATGATGGCATTTTCTaGGCGGCTGGTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: QLVQWHPCRYQTSSAAQPDDGIF*AAGPDE
Trigger: TTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC...CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp CAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGTCTTCAGGACCACCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QLVQWHPCRYQTSSAAQPSSGPP*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGA...CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTCGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTRLPTS*YPVNCQ
Trigger: CTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCG...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GATCTTTTCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTGCAGGGTCACTCACAGCTTGTGCAATaGCATCCCTGTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: DLFFLQQFGSGQGLVQGHSQLVQ*HPCRYQ
Trigger: TTGGTATCGACAGGGATGCCATTGCACAAGCTGTGA...GTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACAGAGCAGGTCGGGGCTaGAGCTTGGGACTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CHMESQAPLARPRNLHFNRAGRG*SLGLQN
Trigger: ATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCT...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTCTTCCCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCATGTTGATCTTTTCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VFPDGNAAVGAAEVDVALMLIFS*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGAAAAGATCAACAT...GAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR TCA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACTCTGGCCCAGGCGATTaGTGTCTAGAATGGCCACAA +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYSGPGD*CLEWPQ
Trigger: TTGTGGCCATTCTAGACATCAATCGCCTGGGCCAGA...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR TCA 90 bp CTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LGLGDEAPHSLCNGIPVDCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp CAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCTACTTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: QLPVSQQAIDSVAVVPATCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...AGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR TCA 90 bp CACCTTGGCTTGTCCGACCTGGAAGTCCTCATTGTTGTTATAGATGATGGCATTGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HLGLSDLEVLIVVIDDGIVGNVH*GCVLLW
Trigger: CCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC...AATGCCATCATCTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCCCCATCCAGGGCGATaGTGCGGTCACTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLPHPGR*CGHWHG
Trigger: GCCATGCCAGTGACCGCATCATCGCCCTGGATGGGG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSQMSPGDEWEAAIVLEVERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...AACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACGAGCGCTGTCGAGAATaGGTTTTCTGTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CHMESQAPLARPRNLHFNERCRE*VFCPGA
Trigger: AGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTC...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCACCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSPCRSI*RCRPSH
Trigger: GTGGGATGGCCTACACCGGCAAATACTTCGACAAGG...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACCAATGCCACCTTCATAATAATGGTCCTCCACGGTGAGGATCCTGCCCTTGGTTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: TNATFIIMVLHGEDPALGCPAYR*WRRPWP
Trigger: AGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACA...ACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QEDRWTCPQMCLILATALISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: CAMASLSIPNIFSSSAGFMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...GAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTWYPVN*QVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCA...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCGCTGCAGCATGACGTaGGGTGGCCAGAGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNRCSMT*GGQSPP
Trigger: CGGCGGGCTCTGGCCACCCCACGTCATGCTGCAGCG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CACCTTGGCTTGTCCGACCTGGAAGTCCTCATTGTTGTTATAGATGATGGCATTCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HLGLSDLEVLIVVIDDGILLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...AATGCCATCATCTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGACTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDCSWAG*ACGCWQ
Trigger: TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACA...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTGATGATGGCATTTTCTaGGCGGCTGGTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTDDGIF*AAGPDE
Trigger: TTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CGGTCCGGGTGCTCCTTTTTGAAGATCTCCGAGAAGGTGGAATTTTTGGTGTCCGATGATGGCATTTTCTaGGCGGCTGGTCCGGATGAA +
Preference number: 4 (lower is better)
Translates to: RSGCSFLKISEKVEFLVSDDGIF*AAGPDE
Trigger: TTCATCCGGACCAGCCGCCCAGAAAATGCCATCATC...GGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGAGAATGAGTTTTCTGTCCAGGTTGGCTTGTCCGACCTaGAAGTCCTCATTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: RILPLVARALSRMSFLSRLACPT*KSSLLL
Trigger: TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAA...CCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACCAAGGGCAGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACTCTTCAGGACCACCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYSSGPP*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGA...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCCAGTCTTCAGGACCACCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RILCDIRSSWASCHMESQSSGPP*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGA...CTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGAGGGGTTGCCAGGATCTTCTTTTTGCTCTGGATCTGGCTGTAGATCTCCTGCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: WRGCQDLLFALDLAVDLLPITVT*SSLLFR
Trigger: CCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGG...CAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTTCACAGCTTGTGCAATaGCATCCCTGTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: GQEDRWTCPQMCLILATASQLVQ*HPCRYQ
Trigger: TTGGTATCGACAGGGATGCCATTGCACAAGCTGTGA...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTAGCTACTCGGGAGGCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTSYSGG*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGCCTCCCGAGTAGCT...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423516.5
CDS-3UTR CCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGAGATTCCAAGGGGACTTaGGACACCCAGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGDSKGT*DTQVLA
Trigger: GGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATC...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGGGTCAGGAGGACAGGTaGACGTGTCCACAAATGTGT +
Preference number: 4 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLGQEDR*TCPQMC
Trigger: ACACATTTGTGGACACGTCCACCTGTCCTCCTGACC...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGATCTTTTCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTGCAGGGTCCAGGCGATTGATGTCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LIFSFFSSSAAAKASCRVQAIDV*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGACATCAATCGCCTG...GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR TCA 90 bp GCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: AGAWDCRILCDIRSSWASCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...ACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCCAGCACGCGGATGTTaGTCTTTTCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTPARGC*SFLSSA
Trigger: TGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGG...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISPYRAL*QLPVSQ
Trigger: CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423516.5
ENST00000462138.6
CDS-3UTR TCA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACCTGCAGAATTCTGTGTaGCATCAGAAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CHMESQAPLARPRNLHFNLQNSV*HQKLLG
Trigger: GCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAG...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ATGATGGCATTTTCTGGGCGGCTGGTCCGGATGAAGCAGATACCCTTTGTATTGGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: MMAFSGRLVRMKQIPFVLGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...CAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR GCA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PFPESQECIDPRPTLHTRPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCCTGCCCGTAGGCCTTaGGGGTGGCTATCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLPARRP*GWLSCP
Trigger: GGGACAAGATAGCCACCCGCAAGGCCTACGGGCAGG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ATGATGGCATTTTCTGGGCGGCTGGTCCGGATGAAGCAGATACCCTTTGTATTGTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: MMAFSGRLVRMKQIPFVLWYPVN*QVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCA...CAATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCCCAGAAAATGCCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAATGCGGTCACTGGCATaGCCCAGCTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISMRSLA*PSLASA
Trigger: GGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCAT...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCATGCGGTCACTGGCATaGCCCAGCTTGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLMRSLA*PSLASA
Trigger: GGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCAT...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGATCTCCGAGAAGGTaGAATTTTTGGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QEDRWTCPQMCLILATALRSPRR*NFWCPH
Trigger: ATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCGTCCTGTTGCGGGTaGCACAGCCCACCGCGATGC +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPSCCG*HSPPRC
Trigger: GCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCAGATACCCTTTGTATTaGCGGCTAGTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTRYPLY*RLVPLP
Trigger: AGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCT...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCTAGAAGGCAGGTTGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGAAGATACCCTTTGTATTaGCGGCTAGTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: ARRQVAVKCHLVMNGRQRRYPLY*RLVPLP
Trigger: AGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCT...TCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTTCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGTTGGCTTGTCCGACCTaGAAGTCCTCATTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQLACPT*KSSLLL
Trigger: TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAA...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCTCACAGCTTGTGCAATaGCATCCCTGTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTSQLVQ*HPCRYQ
Trigger: TTGGTATCGACAGGGATGCCATTGCACAAGCTGTGA...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACGACATCAGAAGCTCCTaGGCCAGTTGTCACATGGAG +
Preference number: 4 (lower is better)
Translates to: CHMESQAPLARPRNLHFNDIRSS*ASCHME
Trigger: CTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTC...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCCAGAACCTGCACTaGCTGCAAACACATCAAAAA +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPQNLH*LQTHQK
Trigger: TTTTTGATGTGTTTGCAGCCAGTGCAGGTTCTGGGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR TCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GATCTGGCTGTAGATCTCCTGGATGATCTGCTCAGCCATGTTTTTGGGGAGGGGTGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: DLAVDLLDDLLSHVFGEGCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...CCCCTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLVGNVH*GCVLLW
Trigger: CCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGAGGCGGCTGGTCCGGATaGAGCAGATACCCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGGGWSG*SRYPLY
Trigger: ATACAAAGGGTATCTGCTTCATCCGGACCAGCCGCC...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACAGTGGCCACGTCGGTaGAAGCTTGTTTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISQWPRR*KLVSGP
Trigger: CGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAGATAGTTCTGGAGGTTaGGGGCAGTTGCAGGTGATT +
Preference number: 4 (lower is better)
Translates to: VVTWSPRPHWQDPEICILDSSGG*GQLQVI
Trigger: AATCACCTGCAACTGCCCTCAACCTCCAGAACTATC...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAATGTCCATCTGGTGCTaGAGTGGGGCCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISMSIWC*SGAGSL
Trigger: GAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGACACAGCCTCACCAATaGCACCTTCATAATAATGGT +
Preference number: 4 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSETQPHQ*HLHNNG
Trigger: ACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGT...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACGCTGGAGCTTGGGACTaGAGAATTCTGTGTGACATC +
Preference number: 4 (lower is better)
Translates to: CHMESQAPLARPRNLHFNAGAWD*RILCDI
Trigger: GATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGC...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCAATAGACTCGGTAGCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTNRLGS*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGCTACCGAGTCTATT...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296289.10
ENST00000462138.6
CDS-3UTR CCA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCAATAGACTCGGTAGCTaGCCTTGTCGAAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLINRLGS*PCRSIC
Trigger: GCAAATACTTCGACAAGGCCAGCTACCGAGTCTATT...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNHLVLQ*GRVTLA
Trigger: GGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCTGTTGGCTGGTGCTTaGCCTGGCCAAAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLLLAGA*PGQRPC
Trigger: GCAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCGGCAATGATGGCTGTTaGCTGGTGCTTGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLGNDGC*LVLGLA
Trigger: GGCCAGGCCAAGCACCAGCCAACAGCCATCATTGCC...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCGGGTGCGTCCTCCTGTaGAGGGGTTGCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLGCVLL*RGCQDL
Trigger: AAGATCCTGGCAACCCCTCCACAGGAGGACGCACCC...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTGGCATGGCCCAGCTTaGCCAGTGCCTGCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNWHGPA*PVPARR
Trigger: CCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCAGATCTCCGAGAAGGTaGAATTTTTGGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTRSPRR*NFWCPH
Trigger: ATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACAGATCTCCGAGAAGGTaGAATTTTTGGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LVMRPLTACAMASLSIPNRSPRR*NFWCPH
Trigger: ATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT...GTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATGCCCGTCTTCCCCGATaGAAACGCCGCAGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNARLPR*KRRSGS
Trigger: GCTCCCACTGCGGCGTTTCCATCGGGGAAGACGGGC...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRISSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGTTGGCTTGTCCGACCTaGAAGTCCTCATTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPLACPT*KSSLLL
Trigger: TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAA...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGACGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGRLPTS*YPVNCQ
Trigger: CTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCG...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCCAGTCACAGCTTGTGCAATaGCATCCCTGTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: RILCDIRSSWASCHMESQSQLVQ*HPCRYQ
Trigger: TTGGTATCGACAGGGATGCCATTGCACAAGCTGTGA...CTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
3UTR CAA 72 bp TTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGATaGAGGACCTCTCATGCCATCCTGAGGGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: FNKLRGTVPHLG*RTSHAILRVPF
Trigger: AAAAGGGACCCTCAGGATGGCATGAGAGGTCCTCAATCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATGTAGATCTCCTGGATaGTCTGCTCAGCCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSCRSPG*SAQPCF
Trigger: AAAACATGGCTGAGCAGATCATCCAGGAGATCTACA...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCGTTGGCAATGTCCACTaGGGGTGCGTCCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIVGNVH*GCVLLW
Trigger: CCACAGGAGGACGCACCCTCAGTGGACATTGCCAAC...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCAATGTAGCACTCGATaGAGCGGTCCGGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLQCSTR*SGPGAP
Trigger: AGGAGCACCCGGACCGCTTCATCGAGTGCTACATTG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: STFPRISGMYRPPPHTSYHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CACAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSLCNGIPVDTKHLQQLSHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR TCA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTCATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAACAAAGCGGTCATTGTaGGGATTCCGGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISTKRSL*GFRGSW
Trigger: CCAGGACCCCCGGAATCCGCACAATGACCGCTTTGT...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCCTGGCCAAAGGCCTTaGACAGCTCCTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIPGQRP*TAPPRC
Trigger: ACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTCCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGCCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCACACAGCCTCACCAATaGCACCTTCATAATAATGGT +
Preference number: 4 (lower is better)
Translates to: APFPESQECIDPRPTLHTTQPHQ*HLHNNG
Trigger: ACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGT...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGACACAGCCTCACCAATaGCACCTTCATAATAATGGT +
Preference number: 4 (lower is better)
Translates to: QLVQWHPCRYQTSSAAQPTQPHQ*HLHNNG
Trigger: ACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGT...CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CCA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAAGATCTCCGAGAAGGTaGAATTTTTGGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSRSPRR*NFWCPH
Trigger: ATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TGGAGGGGTTGCCAGGATCTTCTTTTTGCTCTGGATCTGGCTGTAGATCTCCTGAGATCTCCGAGAAGGTaGAATTTTTGGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WRGCQDLLFALDLAVDLLRSPRR*NFWCPH
Trigger: ATGGGGACACCAAAAATTCCACCTTCTCGGAGATCT...CAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCATGGAAACGCCGCAGTaGGAGCCGCAGAGGTTGATG +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLMETPQ*EPQRLM
Trigger: CATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCAT...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTCTTCTAGGGCCATCTaGGAGGGCCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNSSRAI*EGPSSP
Trigger: CGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTGCTGGCGAAGGCCATaGCCTCCCATACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRICWRRP*PPIQSP
Trigger: AGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCA...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423516.5
ENST00000462138.6
CDS-3UTR TCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTGTGTCCATCCACGATaGTGGCATGCCAACCGAAGG +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLCVHPR*WHANRR
Trigger: CCTTCGGTTGGCATGCCATCATCGTGGATGGACACA...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNNGPPR*GSCPWW
Trigger: CCACCAAGGGCAGGATCCTCACCGTGGAGGACCATT...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTCTAGTTAAAAGGATATaGCAAGGACGAGGGACAACA +
Preference number: 4 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFLVKRI*QGRGTT
Trigger: TGTTGTCCCTCGTCCTTGTCATATCCTTTTAACTAG...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGAAGGCTGCAAAAGTaGTGCAGAAGGGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLRRLQK*CRRAPS
Trigger: GGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCT...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGTTGTCACATGGAGTCCCAGACACAGCCTCACCAATaGCACCTTCATAATAATGGT +
Preference number: 4 (lower is better)
Translates to: RILCDIRSSWASCHMESQTQPHQ*HLHNNG
Trigger: ACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGT...CTGGGACTCCATGTGACAACTGGCCCAGGAGCTTCTGATGTCACACAGAATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGAT +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISAPHSL*NGIPVD
Trigger: ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGC...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPQLCS*AGWACG
Trigger: TCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCATGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISCCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTGTTGCTCTCGGAGATaGCGGCCATGCGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLCCSRR*RPCESG
Trigger: ACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACA...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACAGATACCCTTTGTATTaGCGGCTAGTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDRYPLY*RLVPLP
Trigger: AGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCT...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCGGCTTCCCACTTCTTaGTACCCGGTTAACTGCCAG +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLRLPTS*YPVNCQ
Trigger: CTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATAAAAGAGGACAGCCATaGTCTCTGCGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNKRGQP*SLRRCS
Trigger: GCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTT...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACCTCTCAGTACATCTTTaGGCACCTTTCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDLSVHL*APFPES
Trigger: AGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAG...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR TCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCGTCCAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIRPSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGGACG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNWAGWA*GCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTGCCAGTATAAGGTTTTaGACAGTTGACCTTATAAGC +
Preference number: 4 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFASIRF*TVDLIS
Trigger: GCTTATAAGGTCAACTGTGCAAAACCTTATACTGGC...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCAGCTTATAGATGCTaGCGAAGGCCATGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPAYRC*RRPWPP
Trigger: GGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIWACGC*QCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCA...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNCSWAG*ACGCWQ
Trigger: TTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCGTAGGCCTTGCGGGTaGCTATCTTGTCCCCAACTT +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIRRPCG*LSCPQL
Trigger: AAGTTGGGGACAAGATAGCCACCCGCAAGGCCTACG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTCTTCAGGACCACCTTaGCTTGTCCGACCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLSSGPP*LVRPGS
Trigger: ACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGA...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISPITVT*SSLLFR
Trigger: CCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCCACAAGTCGGAGCTaGTCTTCCTCAGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPTSRS*SSSGSA
Trigger: TGCTGAACCTGAGGAAGATCAGCTCCGACTTGTGGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296289.10
CDS-3UTR TCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCGGGTGCTCCTTTTTaGAGATCTCCGAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPGAPF*RSPRRW
Trigger: CCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AGACCCAGAAATCTGCATTTTAACAAGTTGAGGGGGACAGTTCCACACTTGGGACATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RPRNLHFNKLRGTVPHLGHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...TCCCAAGTGTGGAACTGTCCCCCTCAACTTGTTAAAATGCAGATTTCTGGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRICPAYR*WRRPWP
Trigger: AGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACA...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR GCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCGGGAGGGGCTTCCCATaGCAAGACTCCTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIGRGFP*QDSLSS
Trigger: AGAAGATAAGGAGTCTTGGCATGGGAAGCCCCTCCC...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACCTGGTCATCCTTaGTCTTCAGGACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRISPGHP*SSGPPW
Trigger: CCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGA...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATGAGCTGCATGGCCCTTaGAGAGCACAAAGCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNELHGP*RAQSGH
Trigger: ATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTC...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATAGGATGGGAGCTGCATaGCCCTTGGAGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNRMGAA*PLESTK
Trigger: CTTTGTGCTCTCCAAGGGCCATGCAGCTCCCATCCT...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGAAGGTGGAATTTTTaGTGTCCCCATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLRRWNF*CPHPGR
Trigger: TCGCCCTGGATGGGGACACCAAAAATTCCACCTTCT...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACCAGCACGCGGATGTTaGTCTTTTCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISPARGC*SFLSSA
Trigger: TGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTGTCCAGCTTATAGATaGTGGCGAAGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNCPAYR*WRRPWP
Trigger: AGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR GCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCATGAAGCGGTCCGGGTaGTCCTTTTTGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIMKRSG*SFLKIS
Trigger: GGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCAT...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTCACCTGGTCATCCTTaGTCTTCAGGACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNSPGHP*SSGPPW
Trigger: CCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTGGTACCCGGTTAACTaGCAGGTGGGTGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNWYPVN*QVGDSD
Trigger: ATCACTGTCACCCACCTGGCAGTTAACCGGGTACCA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACGCCAGTATAAGGTTTTaGACAGTTGACCTTATAAGC +
Preference number: 4 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDASIRF*TVDLIS
Trigger: GCTTATAAGGTCAACTGTGCAAAACCTTATACTGGC...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCAGAAGGTGGAATTTTTaGTGTCCCCATCCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIRRWNF*CPHPGR
Trigger: TCGCCCTGGATGGGGACACCAAAAATTCCACCTTCT...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAAGATACCCTTTGTATTaGCGGCTAGTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISRYPLY*RLVPLP
Trigger: AGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCT...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCGATAACGGTCACCTaGTCATCCTTGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPITVT*SSLLFR
Trigger: CCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCATTGTTGTTATAGATaGTGGCATTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLHCCYR*WHFLGG
Trigger: GCCGCCCAGAAAATGCCATCATCTATAACAACAATG...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACTCTCAGTACATCTTTaGGCACCTTTCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISLSVHL*APFPES
Trigger: AGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATGATAGTTCTGGAGGTTaGGGGCAGTTGCAGGTGATT +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNDSSGG*GQLQVI
Trigger: AATCACCTGCAACTGCCCTCAACCTCCAGAACTATC...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462138.6
CDS-3UTR GCA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACCAGGATCTTCTTTTTaGTCTGGATCTGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISPGSSF*SGSGCR
Trigger: TCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATGGGACTTGTAGCGCATaGTGTGGAAAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNGTCSA*CGKRGQ
Trigger: CTGTCCTCTTTTTCCACACCATGCGCTACAAGTCCC...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR TCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCAGCACGCGGATGTTaGTCTTTTCTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPARGC*SFLSSA
Trigger: TGCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATATCTCCTGGATGATCTaGTCAGCCATGTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNISWMI*SAMFLG
Trigger: CCCCAAAAACATGGCTGAGCAGATCATCCAGGAGAT...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR GCA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACACAGCCTCACCAATaGCACCTTCATAATAATGGT +
Preference number: 4 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLTQPHQ*HLHNNG
Trigger: ACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGT...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTCACAGCTTGTGCAATaGCATCCCTGTCGATACCAA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNSQLVQ*HPCRYQ
Trigger: TTGGTATCGACAGGGATGCCATTGCACAAGCTGTGA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CCA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATTTGGCTTGTCCGACCTaGAAGTCCTCATTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNLACPT*KSSLLL
Trigger: TAACAACAATGAGGACTTCCAGGTCGGACAAGCCAA...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS GCA 90 bp CCTTCAGCTGGAGCAGGTGGCCGGAGCTGGCAGAGCACACACAGCTaGAGCTCTGAAAGGCACCAGCCAGGGTGGGGCACGGGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PSAGAGGRSWQSTHS*SSERHQPGWGTGAA
Trigger: GGCAGCCCCCGTGCCCCACCCTGGCTGGTGCCTTTCAGAGCTGCAGCTGTGTGTGCTCTGCCAGCTCCGGCCACCTGCTCCAGCTGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS TCA 90 bp TGGAGCAGGTGGCCGGAGCTGGCAGAGCACACACAGCTGCAGCTCTaGAAGGCACCAGCCAGGGTGGGGCACGGGGGCTGCCTCACTCCA +
Preference number: 5 (lower is better)
Translates to: WSRWPELAEHTQLQL*KAPARVGHGGCLTP
Trigger: TGGAGTGAGGCAGCCCCCGTGCCCCACCCTGGCTGGTGCCTTTCAGAGCTGCAGCTGTGTGTGCTCTGCCAGCTCCGGCCACCTGCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS TCA 90 bp GCTGGGCACCACTATCTGCCCTGGTGGGGGCCTGGTGGGACATCCTaGGGGCTGCGTGTAGCTAAGAGCTCAGCCTGCGGGCCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: AGHHYLPWWGPGGTS*GLRVAKSSACGPVP
Trigger: AGGGACAGGCCCGCAGGCTGAGCTCTTAGCTACACGCAGCCCTCAGGATGTCCCACCAGGCCCCCACCAGGGCAGATAGTGGTGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp CCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGAAGGGCACCGTCCTGTaGCGGGTGGCACAGCCCACC +
Preference number: 5 (lower is better)
Translates to: PESAWSASRLRQFPSPLRKGTVL*RVAQPT
Trigger: GGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT...CCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGCGATGATGCGGTCACTGGCATGGCCCAGCTTGGCCAGTGCCTGCCCGTAGGCCACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GDDAVTGMAQLGQCLPVGHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...GCCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCATCATCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp TCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCCCCGGGAGGCGGAGGTaGCAGTGGGCCGAGATCGTA +
Preference number: 5 (lower is better)
Translates to: SGRCPSGAAVGPGHSGPGPGRRR*QWAEIV
Trigger: TACGATCTCGGCCCACTGCAACCTCCGCCTCCCGGG...GCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CAA 90 bp AGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCCTCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SSEDFLGTPPVAGAPSPPPQRLM*LSEMAA
Trigger: GGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG...AGGAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGTCCTGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCCAGGACCACCTTGGCTaGTCCGACCTGGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GPGPGPRTPASLAHPPRFQDHLG*SDLEVL
Trigger: GAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTG...GAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GGPESAWSASRLRQFPSPEAPHS*CNGIPV
Trigger: GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTC...CGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: WGGPESAWSASRLRQFPSHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS CCA 90 bp CCATTTCACCAGGAGCCTGTTCCTCCTCCCCAGGCTGGGCGGGGCTaGGCACAGGACGTGGCCACCAAACTGAGGTTCAAACCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: PFHQEPVPPPQAGRG*AQDVATKLRFKPLR
Trigger: GCGGAGAGGTTTGAACCTCAGTTTGGTGGCCACGTCCTGTGCCCAGCCCCGCCCAGCCTGGGGAGGAGGAACAGGCTCCTGGTGAAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS-3UTR CAA 90 bp CAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: QKGTVLLRVAQPTAMLTMGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...CATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: EGLAPLLVDVHLVLQWGRAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...CCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR CAA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTAAGGGCACCGTCCTGTaGCGGGTGGCACAGCCCACC +
Preference number: 5 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTKGTVL*RVAQPT
Trigger: GGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp CCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATAAGGGCACCGTCCTGTaGCGGGTGGCACAGCCCACC +
Preference number: 5 (lower is better)
Translates to: PDGNAAVGAAEVDVALGDKGTVL*RVAQPT
Trigger: GGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT...ATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCGGTCGGGGCTGGAGCTaGGGACTGCAGAATTCTGTG +
Preference number: 5 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPGRGWS*GLQNSV
Trigger: CACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGACC...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS GCA 90 bp GTCCCCAGGCCAAGCCTGAGGCCTTTTAAGAGACCACGTCCCAGCTaGTCTGAGGGACAGCTCTGGGTGTTCTGGGCCACAGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: VPRPSLRPFKRPRPS*SEGQLWVFWATAAL
Trigger: GAGGGCAGCTGTGGCCCAGAACACCCAGAGCTGTCCCTCAGAGCAGCTGGGACGTGGTCTCTTAAAAGGCCTCAGGCTTGGCCTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp CCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGAAGCACAAAGCGGTCATaGTGCGGATTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PQWEPQRLMLLSEMAAMRSTKRS*CGFRGS
Trigger: GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCT...TCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCCAGAACCGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: GPRTPASLAHPPRFFPRTGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...GGTTCTGGGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGTCCTGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 5 (lower is better)
Translates to: GPGPGPRTPASLAHPPRFLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...GAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: PDGNAAVGAAEVDVALGDAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...ATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: WGGPESAWSASRLRQFPSWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGCAGGACCACCTTGGCTaGTCCGACCTGGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: PESAWSASRLRQFPSPLRQDHLG*SDLEVL
Trigger: GAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTG...CCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAAGTGAGGATCCTGCCCTaGGTGGCACGAGCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQVRILP*VARALS
Trigger: CGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCAC...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCGTGAGGATCCTGCCCTaGGTGGCACGAGCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: DSDARLAHYCTGHSLTNAVRILP*VARALS
Trigger: CGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCAC...GGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS TCA 90 bp GTGTCTGGGCGAGGGGTGAAGGTGGGGAGGGCGGCTTGTGCATACTaGCCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCAATGATGGCT +
Preference number: 5 (lower is better)
Translates to: VSGRGVKVGRAACAY*PVIPRPLKVLAMMA
Trigger: AGCCATCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGTCAGTATGCACAAGCCGCCCTCCCCACCTTCACCCCTCGCCCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS TCA 90 bp AGACACTACACCCAGAGCCCGCCGCAGTGGTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCGTGTCCTTCAAGGCCTGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RHYTQSPPQWWPGWS*YVGGWPCPSRPAAS
Trigger: AGAAGCTGCAGGCCTTGAAGGACACGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCACCACTGCGGCGGGCTCTGGGTGTAGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS GCA 90 bp AGCCACAGTGTCTGGGCGAGGGGTGAAGGTGGGGAGGGCGGCTTGTaGATACTGACCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCAAT +
Preference number: 5 (lower is better)
Translates to: SHSVWARGEGGEGGL*ILTRDPSALEGLGN
Trigger: ATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGTCAGTATGCACAAGCCGCCCTCCCCACCTTCACCCCTCGCCCAGACACTGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 90 bp AGGAATCTGAAGCCCACACCTGGGTGCCAGGGAGTGACTTACGCCTaGCTCATTCTCCGGCCTGGGGCAGAACCCAGGTTCCAAACCCCC +
Preference number: 5 (lower is better)
Translates to: RNLKPTPGCQGVTYA*LILRPGAEPRFQTP
Trigger: GGGGGTTTGGAACCTGGGTTCTGCCCCAGGCCGGAGAATGAGGCAGGCGTAAGTCACTCCCTGGCACCCAGGTGTGGGCTTCAGATTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 90 bp GAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGTaGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: EGLAPLLVDVHLVLQ*GRVTLAQAIDVWPC
Trigger: ACAAGGCCAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS CCA 90 bp GTAAGACAGAAGCTCCCAGAGGGCCAGGAGGCTGCTCCAGGAGACTaGCCCTCTACCTGCCGAGGGCAAGGGAGGAATGGCATCATCCCA +
Preference number: 5 (lower is better)
Translates to: VRQKLPEGQEAAPGD*PSTCRGQGRNGIIP
Trigger: TGGGATGATGCCATTCCTCCCTTGCCCTCGGCAGGTAGAGGGCCAGTCTCCTGGAGCAGCCTCCTGGCCCTCTGGGAGCTTCTGTCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 90 bp CTGTTTCCCTGGATGTGCGGGTCAGAGCTACGTAGCCACAGTGTCTaGGCGAGGGGTGAAGGTGGGGAGGGCGGCTTGTGCATACTGACC +
Preference number: 5 (lower is better)
Translates to: LFPWMCGSELRSHSV*ARGEGGEGGLCILT
Trigger: GGTCAGTATGCACAAGCCGCCCTCCCCACCTTCACCCCTCGCCCAGACACTGTGGCTACGTAGCTCTGACCCGCACATCCAGGGAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS CCA 90 bp TCCCTGGAGCCTGGTGAGCTCAGTGAGCAGCAAGGGCTGTTTCCCTaGATGTGCGGGTCAGAGCTACGTAGCCACAGTGTCTGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: SLEPGELSEQQGLFP*MCGSELRSHSVWAR
Trigger: CCTCGCCCAGACACTGTGGCTACGTAGCTCTGACCCGCACATCCAGGGAAACAGCCCTTGCTGCTCACTGAGCTCACCAGGCTCCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS CCA 90 bp GGCCTGTCCCTGTCCCAGGGAGAACCACTTGCCACCTCGTTCCCATaGCTGAGCTCATGCTTGCCAACCCCTTGCACTGGGGCATCTGGT +
Preference number: 5 (lower is better)
Translates to: GLSLSQGEPLATSFP*LSSCLPTPCTGASG
Trigger: ACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGTGGTTCTCCCTGGGACAGGGACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp GGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: GGHANLVKGPREEGCKSAAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...AGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GAAAGCTTGTTTCGGGACCGGGTGCCCGTCCAAGTCGGAGCTGATCTTCCTCAGGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: ESLFRDRVPVQVGADLPQAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...CTGAGGAAGATCAGCTCCGACTTGGACGGGCACCCGGTCCCGAAACAAGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CAA 90 bp GCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: ALGLGDEAPHSLCNGIPVAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp CCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATGCGACGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: PQWEPQRLMLLSEMAAMRRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...TCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp CTGGTAGATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: LVDVHLVLQWGRVTLAQAVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...CGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CAA 90 bp ACAGCTCTGAGGATTTCCTGGGGACTCCACCAGTGGCCGGGGCACCCAGCCCTCGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: TALRISWGLHQWPGHPALEKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...GAGGGCTGGGTGCCCCGGCCACTGGTGGAGTCCCCAGGAAATCCTCAGAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GCAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: AEGHRPVAGGTAHRDAHHEKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...ATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GTCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGAAGGGCACCGTCCTGTaGCGGGTGGCACAGCCCACC +
Preference number: 5 (lower is better)
Translates to: VGAGAWDCRILCDIRSSWKGTVL*RVAQPT
Trigger: GGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT...CCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGTACCCGGTTAACTGCCAGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GTRLTARWVTVMPGSPTTPQRLM*LSEMAA
Trigger: GGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG...AGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: ALGLGDEAPHSLCNGIPVPQRLM*LSEMAA
Trigger: GGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG...GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCGGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GPREEGCKSAAEGHRPVAEAPHS*CNGIPV
Trigger: GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTC...CGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS TCA 90 bp CCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTGGACAGAGAGTaGATCAGGCCAGTCCCTCTCACCTGGACCCAGCTGGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: PVSQQAIDSVAVDRE*IRPVPLTWTQLAPT
Trigger: GGTGGGAGCCAGCTGGGTCCAGGTGAGAGGGACTGGCCTGATTCACTCTCTGTCCACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 90 bp TGTCCCTGTCCCAGGGAGAACCACTTGCCACCTCGTTCCCATGGCTaGGCTCATGCTTGCCAACCCCTTGCACTGGGGCATCTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: CPCPRENHLPPRSHG*AHACQPLALGHLVQ
Trigger: CTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGTGGTTCTCCCTGGGACAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 90 bp GAGCCTGGTGAGCTCAGTGAGCAGCAAGGGCTGTTTCCCTGGATGTaGGGGTCAGAGCTACGTAGCCACAGTGTCTGGGCGAGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: EPGELSEQQGLFPWM*GSELRSHSVWARGE
Trigger: TTCACCCCTCGCCCAGACACTGTGGCTACGTAGCTCTGACCCGCACATCCAGGGAAACAGCCCTTGCTGCTCACTGAGCTCACCAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 90 bp TTCTCCTCACCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCGATAACGGTCACCTGGTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: FSSPFFSSSAAAKAS*RVTPAPITVTWSSL
Trigger: CAAGGATGACCAGGTGACCGTTATCGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGGTGAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 90 bp TGTCTTGGAGAACCCAACTCAGGAGGGTGGAGAGGTGTCAACCGCTaGACCGGCCAGGGCTGCCAGGATTCTCAGCAGAGACAGACTGGC +
Preference number: 5 (lower is better)
Translates to: CLGEPNSGGWRGVNR*TGQGCQDSQQRQTG
Trigger: GCCAGTCTGTCTCTGCTGAGAATCCTGGCAGCCCTGGCCGGTCCAGCGGTTGACACCTCTCCACCCTCCTGAGTTGGGTTCTCCAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CCA 90 bp GCTCAGCTCATCCTTGCCTGTCTTGGAGAACCCAACTCAGGAGGGTaGAGAGGTGTCAACCGCTGGACCGGCCAGGGCTGCCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: AQLILACLGEPNSGG*RGVNRWTGQGCQDS
Trigger: AGAATCCTGGCAGCCCTGGCCGGTCCAGCGGTTGACACCTCTCCACCCTCCTGAGTTGGGTTCTCCAAGACAGGCAAGGATGAGCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CCA 90 bp CCTTGTCCCCAACTTTGTAGCTGGGCAGGCTGGGCATGCGGATGTTaGCAATGTCCACTGAGGGTGCGTCCTCCTGTGGAGGGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: PCPQLCSWAGWACGC*QCPLRVRPPVEGLP
Trigger: TGGCAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS CCA 90 bp CCCATGGCTGAGCTCATGCTTGCCAACCCCTTGCACTGGGGCATCTaGTCCAGCTGTGTTGCCCGCAGTATCCAAGAACCCAGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: PMAELMLANPLHWGI*SSCVARSIQEPRAE
Trigger: CTCCGCTCTGGGTTCTTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp AGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCACCAGCACAAAGCGGTCATaGTGCGGATTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SDARLAHYCTGHSLTNATSTKRS*CGFRGS
Trigger: GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCT...GGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp ATCTGGTGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAAGCACAAAGCGGTCATaGTGCGGATTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: IWCCSGAGSLWPRRLMSRSTKRS*CGFRGS
Trigger: GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCT...TCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CAA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCAGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGGTACCCGGTTAACTGCCAGGTGGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LQQLSRLPTSWYPVNCQVAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...CACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAATGGCCCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: CCSGAGSLWPRRLMSRMARPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...GGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CAA 90 bp CCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCCTAGGGTGAGGATCCTGCCCTaGGTGGCACGAGCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: PESQECIDPRPTLHTRPRVRILP*VARALS
Trigger: CGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCAC...CCTAGGGCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATCACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TGGGGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCAGCTAGAAGGCAGGTaGCAGTCAAATGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: WGGPESAWSASRLRQFPSQLEGR*QSNVTW
Trigger: CCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTG...GCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGGCCCAGGACCAAGGACACCAGCCTCCCTAGCGCACCCTCCACGCTTCTTCCCGTTCCACACTTGGGATaGAGGACCTCTCATGCCATC +
Preference number: 5 (lower is better)
Translates to: WPRTKDTSLPSAPSTLLPVPHLG*RTSHAI
Trigger: GATGGCATGAGAGGTCCTCAATCCCAAGTGTGGAAC...GGGAAGAAGCGTGGAGGGTGCGCTAGGGAGGCTGGTGTCCTTGGTCCTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATGGCGGCCATCTCTGGCCCAGGCGATaGATGTCTGGCCTTGTCGAA +
Preference number: 5 (lower is better)
Translates to: NAAVGAAEVDVALGDGGHLWPRR*MSGLVE
Trigger: TTCGACAAGGCCAGACATCAATCGCCTGGGCCAGAG...ATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp GGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGTGCTGCAGGAGGAGAATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GMPTEGLAPLLVDVHLVLQEENH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTCCTG...CAGCACCAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS TCA 90 bp CCAGACGGATCTGAGTTTAAATCCTGGCTCAGCCACAGGGGTCACTaGGTCACAGCATCTCCCGCTCCCCTTCCCTGGAGCCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PDGSEFKSWLSHRGH*VTASPAPLPWSLVS
Trigger: GCTCACCAGGCTCCAGGGAAGGGGAGCGGGAGATGCTGTGACTCAGTGACCCCTGTGGCTGAGCCAGGATTTAAACTCAGATCCGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS TCA 90 bp ACCTGCACCTGCAAAGCTGTGATCACAGACCACTCTCCCGTGCTGTaGCCACACTCAGGCCACAGCCTCGTACATACCCGAAGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: TCTCKAVITDHSPVL*PHSGHSLVHTRRPR
Trigger: GCGAGGCCTTCGGGTATGTACGAGGCTGTGGCCTGAGTGTGGTCACAGCACGGGAGAGTGGTCTGTGATCACAGCTTTGCAGGTGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460343.5
ENST00000487660.1
ENST00000494523.2
CDS GCA 90 bp TCACCCACAGACCCTCCAAGTCCCTCCTCTCCTCCTGCCTGTACATaGCCCCACCGGCAGAGGCCAGACGGATCTGAGTTTAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: SPTDPPSPSSPPACT*PHRQRPDGSEFKSW
Trigger: CCAGGATTTAAACTCAGATCCGTCTGGCCTCTGCCGGTGGGGGCATGTACAGGCAGGAGGAGAGGAGGGACTTGGAGGGTCTGTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 90 bp CTTGCCACCTCGTTCCCATGGCTGAGCTCATGCTTGCCAACCCCTTaGACTGGGGCATCTGGTCCAGCTGTGTTGCCCGCAGTATCCAAG +
Preference number: 5 (lower is better)
Translates to: LATSFPWLSSCLPTP*TGASGPAVLPAVSK
Trigger: CTTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 90 bp TCCCAGGGAGAACCACTTGCCACCTCGTTCCCATGGCTGAGCTCATaGTTGCCAACCCCTTGCACTGGGGCATCTGGTCCAGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: SQGEPLATSFPWLSS*LPTPCTGASGPAVL
Trigger: CAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGTGGTTCTCCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 90 bp GCTGAGTGGGAAAGGAGGGGCCAGACGTGGGCAGGTGTGTGTTTCTaGGCCCACTGCCCCATCCCTTCACCAATGTGTCCATTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: AEWERRGQTWAGVCF*AHCPIPSPMCPFSS
Trigger: GGAAGAGAATGGACACATTGGTGAAGGGATGGGGCAGTGGGCCCAGAAACACACACCTGCCCACGTCTGGCCCCTCCTTTCCCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 90 bp CCGCTGGACCGGCCAGGGCTGCCAGGATTCTCAGCAGAGACAGACTaGCAATCAGTTGACAATGTCTGCCACGTGGCAGTAAGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: PLDRPGLPGFSAETD*QSVDNVCHVAVSGV
Trigger: CACCCCACTTACTGCCACGTGGCAGACATTGTCAACTGATTGCCAGTCTGTCTCTGCTGAGAATCCTGGCAGCCCTGGCCGGTCCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CCA 90 bp CACCTCGTTCCCATGGCTGAGCTCATGCTTGCCAACCCCTTGCACTaGGGCATCTGGTCCAGCTGTGTTGCCCGCAGTATCCAAGAACCC +
Preference number: 5 (lower is better)
Translates to: HLVPMAELMLANPLH*GIWSSCVARSIQEP
Trigger: GGGTTCTTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp AGGTGGGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: RWVTVMPGSPTTALDTASLGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...TGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GCTGTGTCCATCCACGATGATGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: AVSIHDDGMPTEGLAPLLWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...CAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCATCATCGTGGATGGACACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp GGCGGCCCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGTTGGGTAAAAGACAGTaGATGTGGGGACTGACCGAA +
Preference number: 5 (lower is better)
Translates to: GGPESAWSASRLRQFPSPLGKRQ*MWGLTE
Trigger: TTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAA...CGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGGGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGCGATGATGCGGTCACTGGCATGGCCCAGCTTGGCCAGTGCCTGCCCGTAGGCTCCAGCACGCGGATGTaGATCTTTTCTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GDDAVTGMAQLGQCLPVGSSTRM*IFSFFS
Trigger: GCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGA...GCCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCATCATCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp CAGAAGGGCACCGTCCTGTTGCGGGTGGCACAGCCCACCGCGATGCTCACCATGTCCAGCACGCGGATGTaGATCTTTTCTTGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: QKGTVLLRVAQPTAMLTMSSTRM*IFSWLV
Trigger: GACAAGCCAAGAAAAGATCAACATCCGCGTGCTGGA...CATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS GCA 90 bp GCACTGGCCGCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTaGAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALAALGLGDEAPHSL*NGIPVDTKHLQQLS
Trigger: GCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423525.6
CDS GCA 90 bp GGTCTGCCTTGGCAGCTGGGGTCTGCCCAGGCTCCACCCCACAACTaGGGCCTCAGCTGGAGTAGTAGAAAGCTTGCAACATTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: GLPWQLGSAQAPPHN*GLSWSSRKLATFLF
Trigger: AAACAGGAATGTTGCAAGCTTTCTACTACTCCAGCTGAGGCCGCAGTTGTGGGGTGGAGCCTGGGCAGACCCCAGCTGCCAAGGCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 90 bp CCTTATCTTCTACCCCTGCAGACCCAACACGGGAGGACAGAGGAATaGGTAAGACAGAAGCTCCCAGAGGGCCAGGAGGCTGCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PYLLPLQTQHGRTEE*VRQKLPEGQEAAPG
Trigger: TCCTGGAGCAGCCTCCTGGCCCTCTGGGAGCTTCTGTCTTACCCATTCCTCTGTCCTCCCGTGTTGGGTCTGCAGGGGTAGAAGATAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS-3UTR CAA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCACTGATACGTAGGCGGTaGGCCGTGTCCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSLIRRR*AVSFKA
Trigger: GGCCTTGAAGGACACGGCCAACCGCCTACGTATCAG...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCGGGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGAGCACAAAGCGGTCATaGTGCGGATTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SGLELGTAEFCVTSEAPGSTKRS*CGFRGS
Trigger: GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCT...CCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGGCTGGAGCTTGGGACTGCAGAATTCTGTGTGACATCAGAAGCTCCTGGGCCAGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: GLELGTAEFCVTSEAPGPGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...TGGCCCAGGAGCTTCTGATGTCACACAGAATTCTGCAGTCCCAAGCTCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GATGATGGCATGCCAACCGAAGGCCTCGCACCGCTTCTGGTAGATGTCCATCTGGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: DDGMPTEGLAPLLVDVHLGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...CAGATGGACATCTACCAGAAGCGGTGCGAGGCCTTCGGTTGGCATGCCATCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS-3UTR CAA 90 bp CCCGATGGAAACGCCGCAGTGGGAGCCGCAGAGGTTGATGTTGCTCTCGGAGATCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 5 (lower is better)
Translates to: PDGNAAVGAAEVDVALGDLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...ATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGTTTCCATCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CAA 90 bp GAGGGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: EGQQASEPPYPRRPDCKAAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...AGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTGGCCCAGGACCAACCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: VAGDSKGTWDTQVLAQDQPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...TTGGTCCTGGGCCAGGACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAAAGGGCACCGTCCTGTaGCGGGTGGCACAGCCCACC +
Preference number: 5 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSKGTVL*RVAQPT
Trigger: GGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGCCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWPQRLM*LSEMAA
Trigger: GGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGTGACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: GDSDARLAHYCTGHSLTNWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...ATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGCGCAGATACCCTTTGTATaGGCGGCTAGTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: GPREEGCKSAAEGHRPVAQIPFV*AASSTA
Trigger: GGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTG...CGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCCTCTTCAGGACCACCTaGGCTTGTCCGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVLFRTT*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAG...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAATTTCTGTCCAGGGGCTaGATGGTGAAGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GDGGHANLVKGPREEGCKFLSRG*MVKGSS
Trigger: GCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAA...TTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GCCCCGATAACGGTCACCTGGTCATCCTTGCTCTTCAGGACCACCTTGGCTTGTGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: APITVTWSSLLFRTTLACEAPHS*CNGIPV
Trigger: GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTC...ACAAGCCAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGACCGTTATCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp GAGGGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTCACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: EGQQASEPPYPRRPDCKAHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...AGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGCTGCAGTGGGGCCGGGTCACTCTGGCCCAGGCGATTGATGTCTAGAATGGCCAGACTCCATCTGGCCTaGTCGAAGTATTTGCCGGTG +
Preference number: 5 (lower is better)
Translates to: CCSGAGSLWPRRLMSRMARLHLA*SKYLPV
Trigger: CACCGGCAAATACTTCGACAAGGCCAGATGGAGTCT...GGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS TCA 90 bp CTTATAGATGCTGGCGAAGGCCATGGCCTCCCATACAGAGCCCTCTaGCAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LIDAGEGHGLPYRAL*QLPVSQQAIDSVAV
Trigger: CACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 90 bp GCCCCCATCCCTCAAGAACCCTCCTTCCTCAAGAACAAAGCGAGCTaGCGTGAGATGGTGTGTGGAAGCTCCGAGAGCCACCATGCCACA +
Preference number: 5 (lower is better)
Translates to: APIPQEPSFLKNKAS*REMVCGSSESHHAT
Trigger: TGTGGCATGGTGGCTCTCGGAGCTTCCACACACCATCTCACGTCAGCTCGCTTTGTTCTTGAGGAAGGAGGGTTCTTGAGGGATGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS GCA 90 bp CTCCCCACAACCCCGCCTGCAGGGTCACACACAGGTAGAGGTGTCTaGTGCAGAAATACTCAGTTTGTCGACTGGGTTGGAAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: LPTTPPAGSHTGRGV*CRNTQFVDWVGRDP
Trigger: AGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACACCTCTACCTGTGTGTGACCCTGCAGGCGGGGTTGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS GCA 90 bp AACTCAGGAGGGTGGAGAGGTGTCAACCGCTGGACCGGCCAGGGCTaGCAGGATTCTCAGCAGAGACAGACTGGCAATCAGTTGACAATG +
Preference number: 5 (lower is better)
Translates to: NSGGWRGVNRWTGQG*QDSQQRQTGNQLTM
Trigger: CATTGTCAACTGATTGCCAGTCTGTCTCTGCTGAGAATCCTGGCAGCCCTGGCCGGTCCAGCGGTTGACACCTCTCCACCCTCCTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CCA 90 bp CTGCTGCAGAAATACTCAGTTTGTCGACTGGGTTGGAAGGGACCCTaGCCATCAGAAGGGGAACCCAAGGCCCAGAACAGGGCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLQKYSVCRLGWKGP*PSEGEPKAQNRASR
Trigger: CCTGGAAGCCCTGTTCTGGGCCTTGGGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 90 bp GGCCTTGCGGGTGGCTATTTTGTACCTTGTCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGATGTTGGCAATGTCCACTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GLAGGYFVPCPQLCS*AGWACGCWQCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGGTACAAAATAGCCACCCGCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS CCA 90 bp CTTGTGTTTGGCAACACCGGTGGAGGCTTTGAGGTGGAGCCCCTCTaGCTGACACCCATGCAGATTGACCTCCCTGCTTTGTGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: LVFGNTGGGFEVEPL*LTPMQIDLPALCPL
Trigger: CAAAGGGCACAAAGCAGGGAGGTCAATCTGCATGGGTGTCAGCCAGAGGGGCTCCACCTCAAAGCCTCCACCGGTGTTGCCAAACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 90 bp CACGCCACAAAGCAAGTTAGCGGTGGAGCCAGGACTTCAGGAATCTaGCTTGAGTCACGAGGTTATGGACACAGGTCCTGGGGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: HATKQVSGGARTSGI*LESRGYGHRSWGCC
Trigger: GCAGCACCCCCAGGACCTGTGTCCATAACCTCGTGACTCAAGCCAGATTCCTGAAGTCCTGGCTCCACCGCTAACTTGCTTTGTGGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTGATACGTAGGCGGTaGGCCGTGTCCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTRLIRRR*AVSFKA
Trigger: GGCCTTGAAGGACACGGCCAACCGCCTACGTATCAG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CTGACAGCTCCCCGTCTCCCAGCAAGCAATAGACTCGGTAGCTGTAGTCCCAGCCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 5 (lower is better)
Translates to: LTAPRLPASNRLGSCSPSLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...GCTGGGACTACAGCTACCGAGTCTATTGCTTGCTGGGAGACGGGGAGCTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS-3UTR CAA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: APFPESQECIDPRPTLHTAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGCAGAAGGGCACCGTCCTGTTGGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: KARVKKAAKVLQKGTVLLVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...CAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTCTTCACGCGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCAGGACCACCTTGGCTaGTCCGACCTGGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTRQDHLG*SDLEVL
Trigger: GAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATCTCTTCAGGACCACCTaGGCTTGTCCGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LGLGDEAPHSLCNGIPVDLFRTT*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAG...ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp GGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAGTCACCTGGTCATCCTaGCTCTTCAGGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: GDGGHANLVKGPREEGCKVTWSS*LFRTTL
Trigger: CAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGAC...TTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTGTGAGGATCCTGCCCTaGGTGGCACGAGCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTVRILP*VARALS
Trigger: CGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCAC...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTREAPHS*CNGIPV
Trigger: GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GATCTGGCTGTAGATCTCCTGGATGATCTGCTCAGCCATGTTTTTGGGGAGGGGCACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: DLAVDLLDDLLSHVFGEGHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...CCCCTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000472528.5
CDS CCA 90 bp CACACAGGTAGAGGTGTCTGCTGCAGAAATACTCAGTTTGTCGACTaGGTTGGAAGGGACCCTGGCCATCAGAAGGGGAACCCAAGGCCC +
Preference number: 5 (lower is better)
Translates to: HTGRGVCCRNTQFVD*VGRDPGHQKGNPRP
Trigger: GGGCCTTGGGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACACCTCTACCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 90 bp GGTGGCTATTTTGTACCTTGTCCCCAACTTTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAATGTCCACTGAGGGTGCGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GGYFVPCPQLCSWAG*ACGCWQCPLRVRPP
Trigger: AGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGGTACAAAATAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS CCA 90 bp CCAGATAGATGTGGCCTTGGGGAGGCCTGTGGGGTGAGGACCCTGTaGCTCAGTTTCCTCGCCTGTCCAACAGAGATTATTTCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: PDRCGLGEACGVRTL*LSFLACPTEIISSL
Trigger: AAGGGAGGAAATAATCTCTGTTGGACAGGCGAGGAAACTGAGCCACAGGGTCCTCACCCCACAGGCCTCCCCAAGGCCACATCTATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 90 bp CAGCTGGGGTCTGCCCAGGCTCCACCCCACAACTGCGGCCTCAGCTaGAGTAGTAGAAAGCTTGCAACATTCCTGTTTCCAGTTTGGGTT +
Preference number: 5 (lower is better)
Translates to: QLGSAQAPPHNCGLS*SSRKLATFLFPVWV
Trigger: AACCCAAACTGGAAACAGGAATGTTGCAAGCTTTCTACTACTCCAGCTGAGGCCGCAGTTGTGGGGTGGAGCCTGGGCAGACCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS-3UTR CAA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCTGATACGTAGGCGGTaGGCCGTGTCCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: APFPESQECIDPRPTLHTLIRRR*AVSFKA
Trigger: GGCCTTGAAGGACACGGCCAACCGCCTACGTATCAG...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GAGGGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: EGQQASEPPYPRRPDCKARPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...AGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CTCAGGGCCAGGTGGACTGAGGTCACAATGAGGGATGTAGGTCTCAGCCTCTCAGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: LRARWTEVTMRDVGLSLSVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...TGAGAGGCTGAGACCTACATCCCTCATTGTGACCTCAGTCCACCTGGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTCTACCCCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCAATGATGGCTGTTGGCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: FYPRDPSALEGLGNDGCWPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...CCAACAGCCATCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp CTAGGCCTTGGTGATGAGGCCCCTCACAGCTTGTGCAATGGCATCCCTGTCGATCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: LGLGDEAPHSLCNGIPVDPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...ATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp GTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCCTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: VRRTGGRVHKCVSSSQQLLGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...GAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: GQEDRWTCPQMCLILATALGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...AGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCACCGCAGAGGTTGATGTaGCTCTCGGAGATGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSPQRLM*LSEMAA
Trigger: GGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGG...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: VRRTGGRVHKCVSSSQQLWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...GAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTGCTCTCGGAGATGGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGCAGATACCCTTTGTATaGGCGGCTAGTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LLSEMAAMRIWSKARVKKQIPFV*AASSTA
Trigger: GGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTG...CTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCAGGACCACCTTGGCTaGTCCGACCTGGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: CAMASLSIPNIFSSSAGFQDHLG*SDLEVL
Trigger: GAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTG...GAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGTTTCTGTCCAGGGGCTaGATGGTGAAGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEFLSRG*MVKGSS
Trigger: GCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAA...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGTTTCTGTCCAGGGGCTaGATGGTGAAGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GQQASEPPYPRRPDCKAVFLSRG*MVKGSS
Trigger: GCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAA...CACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTGAAGGGGTCCAGCACGCGGATGTTGATCTTTTCTTGGCTTGTCCGACCTGGATTTCTGTCCAGGGGCTaGATGGTGAAGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VKGSSTRMLIFSWLVRPGFLSRG*MVKGSS
Trigger: GCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAA...TCCAGGTCGGACAAGCCAAGAAAAGATCAACATCCGCGTGCTGGACCCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CAA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAGTGAGGATCCTGCCCTaGGTGGCACGAGCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: VVTWSPRPHWQDPEICILVRILP*VARALS
Trigger: CGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCAC...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: APFPESQECIDPRPTLHTEAPHS*CNGIPV
Trigger: GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTC...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS TCA 90 bp CATCCCTCAAGAACCCTCCTTCCTCAAGAACAAAGCGAGCTGACGTaGGATGGTGTGTGGAAGCTCCGAGAGCCACCATGCCACAACCAC +
Preference number: 5 (lower is better)
Translates to: HPSRTLLPQEQSELT*DGVWKLREPPCHNH
Trigger: GTGGTTGTGGCATGGTGGCTCTCGGAGCTTCCACACACCATCTCACGTCAGCTCGCTTTGTTCTTGAGGAAGGAGGGTTCTTGAGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS GCA 90 bp TATTTTGTACCTTGTCCCCAACTTTGTAGCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCACTGAGGGTGCGTCCTCCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: YFVPCPQLCSWAGWA*GCWQCPLRVRPPVE
Trigger: CTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGGTACAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS-3UTR CAA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACAGCACAAAGCGGTCATaGTGCGGATTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: STFPRISGMYRPPPHTSYSTKRS*CGFRGS
Trigger: GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCT...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTAGCACAAAGCGGTCATaGTGCGGATTCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTSTKRS*CGFRGS
Trigger: GGACCCCCGGAATCCGCACAATGACCGCTTTGTGCT...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTRLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: APFPESQECIDPRPTLHTRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GACAACAAGCAAGTGAACCTCCCTATCCCAGGAGACCTGACTGCAAGGCTGTGGCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: DNKQVNLPIPGDLTARLWPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...CCACAGCCTTGCAGTCAGGTCTCCTGGGATAGGGAGGTTCACTTGCTTGTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: SLCNGIPVDTKHLQQLSRLGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...CCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTREKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCACCTAGGAACAGCAGAGCAGGTCGGGGCTGGAGCTTGGGACTGCAGAATTCTTCCGGGTGCTCCTTTTaGAAGATCTCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SPRNSRAGRGWSLGLQNSSGCSF*KISEKV
Trigger: CACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGA...AGAATTCTGCAGTCCCAAGCTCCAGCCCCGACCTGCTCTGCTGTTCCTAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GACAGTGATGCCAGGCTCGCCCACTACTGCACTGGACACAGCCTCACCAATGCCTTGGGTAAAAGACAGTaGATGTGGGGACTGACCGAA +
Preference number: 5 (lower is better)
Translates to: DSDARLAHYCTGHSLTNALGKRQ*MWGLTE
Trigger: TTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAA...GGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGCCTGGCATCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCACAGGACCACCTTGGCTaGTCCGACCTGGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSQDHLG*SDLEVL
Trigger: GAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTG...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCTCTTCAGGACCACCTaGGCTTGTCCGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPLFRTT*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGAGGGCAGTTGCAGGGTTCCACACTTGGGATaGAGGACCTCTCATGCCATC +
Preference number: 5 (lower is better)
Translates to: PGDEWEAAIVLEVEGSCRVPHLG*RTSHAI
Trigger: GATGGCATGAGAGGTCCTCAATCCCAAGTGTGGAAC...CCTGCAACTGCCCTCAACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTCTCTCCAGACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCGAGTCCCAGGCCCCATaGGCAAGACCCAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: FSPDGQEDRWTCPQMCLIESQAP*ARPRNL
Trigger: CAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTC...GATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGTCTGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTGAGAGTGCCTGGTCAGCTTCCAGACTGAGGCAGTTCCCCAGCCCGCTCAGGAGCACTAGTTTGTTCTaGGCCAGTATAAGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: PESAWSASRLRQFPSPLRSTSLF*ASIRFC
Trigger: GCAAAACCTTATACTGGCCAAGAACAAACTAGTGCT...CCTGAGCGGGCTGGGGAACTGCCTCAGTCTGGAAGCTGACCAGGCACTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCTCCCCCAGCACTAGTTaGTTCTTGGCCAGTATAAGG +
Preference number: 5 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVSPSTS*FLASIR
Trigger: CCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGA...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTCTGATACGTAGGCGGTaGGCCGTGTCCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: CSQMSPGDEWEAAIVLEVLIRRR*AVSFKA
Trigger: GGCCTTGAAGGACACGGCCAACCGCCTACGTATCAG...AACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000462138.6
CDS-3UTR CAA 90 bp TGGAGGGGTTGCCAGGATCTTCTTTTTGCTCTGGATCTGGCTGTAGATCTCCTGCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: WRGCQDLLFALDLAVDLLRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...CAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGGCAACCCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp GCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGCTTCCCACTTCTTGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: ASLSIPNIFSSSAGFPLLVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...AAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTGATCTTTTCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTGCAGGGTCTCCGGGTGCTCCTTTTaGAAGATCTCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LIFSFFSSSAAAKASCRVSGCSF*KISEKV
Trigger: CACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGA...GACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAAAGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGCAGATACCCTTTGTATaGGCGGCTAGTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: QEDRWTCPQMCLILATALQIPFV*AASSTA
Trigger: GGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTG...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACGGTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCAGATACCCTTTGTATaGGCGGCTAGTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: TVRRTGGRVHKCVSSSQQQIPFV*AASSTA
Trigger: GGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTG...CTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGGAGGTTGAGGGCAGTTGCAGGTGATTCCAAGGGGACTTGGGACACCCAGGTCTCCAGCACGCGGATGTaGATCTTTTCTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: WRLRAVAGDSKGTWDTQVSSTRM*IFSFFS
Trigger: GCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGA...GACCTGGGTGTCCCAAGTCCCCTTGGAATCACCTGCAACTGCCCTCAACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTTTCTGTCCAGGGGCTaGATGGTGAAGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTFLSRG*MVKGSS
Trigger: GCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAA...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGCAGCTAGAAGGCAGGTaGCAGTCAAATGTCACCTGG +
Preference number: 5 (lower is better)
Translates to: GGQVDVSTNVSHPRNSSEQLEGR*QSNVTW
Trigger: CCAGGTGACATTTGACTGCAACCTGCCTTCTAGCTG...CTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGGAGTCCCAGGCCCCATaGGCAAGACCCAGAAATCTG +
Preference number: 5 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLESQAP*ARPRNL
Trigger: CAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTC...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GGCGGCCATGCGAATCTGGTCAAAGGCCCGCGTGAAGAAGGCTGCAAAAGTGCTGATGTTGATCTTTTCTaGGCTTGTCCGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GGHANLVKGPREEGCKSADVDLF*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGAAAAGATCAACATC...AGCACTTTTGCAGCCTTCTTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS TCA 90 bp GCCAGGGCTGCCAGGATTCTCAGCAGAGACAGACTGGCAATCAGTTaGCAATGTCTGCCACGTGGCAGTAAGTGGGGTGTGTATTTCGTT +
Preference number: 5 (lower is better)
Translates to: ARAARILSRDRLAIS*QCLPRGSKWGVYFV
Trigger: AACGAAATACACACCCCACTTACTGCCACGTGGCAGACATTGTCAACTGATTGCCAGTCTGTCTCTGCTGAGAATCCTGGCAGCCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS TCA 90 bp GTTGGTGACCAGCCAGCCACTGTCCATAGTCCAATTATCTACATTTaGCCCCAGAGTCAAAGCCCATCTCTCCCACTGGGGCCTCCTACT +
Preference number: 5 (lower is better)
Translates to: VGDQPATVHSPIIYI*PQSQSPSLPLGPPT
Trigger: AGTAGGAGGCCCCAGTGGGAGAGATGGGCTTTGACTCTGGGGTCAAATGTAGATAATTGGACTATGGACAGTGGCTGGCTGGTCACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 90 bp CACCAGGTTCCTGCAGCCTACCACAAGCCACACCCCAAGAGAAAATaGCATGAAGGAAGACGTCAGGAGCTCAGGAAGAAGTACTGGTTG +
Preference number: 5 (lower is better)
Translates to: HQVPAAYHKPHPKRK*HEGRRQELRKKYWL
Trigger: CAACCAGTACTTCTTCCTGAGCTCCTGACGTCTTCCTTCATGCCATTTTCTCTTGGGGTGTGGCTTGTGGTAGGCTGCAGGAACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 90 bp GCATTCTGGGTAAAGGAGCAGCCACGCATGGATATGCAGAACAGATaGCATTTACACTCGAGGGGCAACAGTGTCACCAGGTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AFWVKEQPRMDMQNR*HLHSRGNSVTRFLQ
Trigger: CTGCAGGAACCTGGTGACACTGTTGCCCCTCGAGTGTAAATGCCATCTGTTCTGCATATCCATGCGTGGCTGCTCCTTTACCCAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 90 bp CTCAAGAACCCTCCTTCCTCAAGAACAAAGCGAGCTGACGTGAGATaGTGTGTGGAAGCTCCGAGAGCCACCATGCCACAACCACGAAAA +
Preference number: 5 (lower is better)
Translates to: LKNPPSSRTKRADVR*CVEAPRATMPQPRK
Trigger: TTTTCGTGGTTGTGGCATGGTGGCTCTCGGAGCTTCCACACACCATCTCACGTCAGCTCGCTTTGTTCTTGAGGAAGGAGGGTTCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS-3UTR CAA 90 bp GTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGAGGATTTCCTGCTCTGGCCCAGGCGATaGATGTCTAGAATGGCCACA +
Preference number: 5 (lower is better)
Translates to: VDVSTNVSHPRNSSEDFLLWPRR*MSRMAT
Trigger: TGTGGCCATTCTAGACATCAATCGCCTGGGCCAGAG...CAGGAAATCCTCAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTAACCGGCCCTTGAAGGTCTaGGCAATGATGGCTGTTGGC +
Preference number: 5 (lower is better)
Translates to: CHMESQAPLARPRNLHFNRPLKV*AMMAVG
Trigger: GCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCG...GTTAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCAGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LSTFPRISGMYRPPPHTSEKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...TGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCTCCGGGTGCTCCTTTTaGAAGATCTCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: APFPESQECIDPRPTLHTSGCSF*KISEKV
Trigger: CACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGA...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGGTCCGGGTGCTCCTTTTaGAAGATCTCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SLCNGIPVDTKHLQQLSRSGCSF*KISEKV
Trigger: CACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGA...CCGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450814.6
ENST00000469678.1
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCAGATACCCTTTGTATaGGCGGCTAGTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPQIPFV*AASSTA
Trigger: GGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAGGCAGGTTGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGATAGTTCTCTTCAGGACCACCTaGGCTTGTCCGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KAGCSQMSPGDEWEAAIVLFRTT*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAG...AACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCAACCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTGTCACCTGGTCATCCTaGCTCTTCAGGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFVTWSS*LFRTTL
Trigger: CAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGAC...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCCTCCCCCAGCACTAGTTTGTTCTTGGCCAGTATAAGGTTTTGCACAGTTGACGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSPSTSLFLASIRFCTVDEAPHS*CNGIPV
Trigger: GACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTC...GTCAACTGTGCAAAACCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCTGTCCCCCAGCACTAGTTaGTTCTTGGCCAGTATAAGG +
Preference number: 5 (lower is better)
Translates to: QEDRWTCPQMCLILATALSPSTS*FLASIR
Trigger: CCTTATACTGGCCAAGAACAAACTAGTGCTGGGGGA...CAGAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GCCACCTTCATAATAATGGTCCTCCACGGTGAGGATCCTGCCCTTGGTGGCACGTTGCGGGTGGCTATTTaGTACCTTGTCCCCAACTTT +
Preference number: 5 (lower is better)
Translates to: ATFIIMVLHGEDPALGGTLRVAI*YLVPNF
Trigger: AAAGTTGGGGACAAGGTACAAAATAGCCACCCGCAA...CGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS CCA 90 bp CAATTATCTACATTTGACCCCAGAGTCAAAGCCCATCTCTCCCACTaGGGCCTCCTACTTAGAGAGGCTGGTGTGTACTTAGGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: QLSTFDPRVKAHLSH*GLLLREAGVYLGSL
Trigger: CAGGCTCCCTAAGTACACACCAGCCTCTCTAAGTAGGAGGCCCCAGTGGGAGAGATGGGCTTTGACTCTGGGGTCAAATGTAGATAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TGCAGTCAAATGTCACCTGGTGATGAATGGGAGGCAGCGATAGTTCTGGAGGTTGTGATCCCTCGGCCCTaGAAGGTCTTGGCAATGATG +
Preference number: 5 (lower is better)
Translates to: CSQMSPGDEWEAAIVLEVVIPRP*KVLAMM
Trigger: CATCATTGCCAAGACCTTCAAGGGCCGAGGGATCAC...AACCTCCAGAACTATCGCTGCCTCCCATTCATCACCAGGTGACATTTGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp TCTTTGAGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCCGGGTGCTCCTTTTaGAAGATCTCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SLSTFPRISGMYRPPPHTSGCSF*KISEKV
Trigger: CACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGA...AGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCTCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CAGTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTCCGGGTGCTCCTTTTaGAAGATCTCCGAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: QLSHGVPGPIGKTQKSAFSGCSF*KISEKV
Trigger: CACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGA...AAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCAAGGGCACCGTCCTGTaGCGGGTGGCACAGCCCACC +
Preference number: 5 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIKGTVL*RVAQPT
Trigger: GGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTT...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCTTGGGTAAAAGACAGTaGATGTGGGGACTGACCGAA +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTRLGKRQ*MWGLTE
Trigger: TTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAA...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCAGATACCCTTTGTATaGGCGGCTAGTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: STFPRISGMYRPPPHTSYQIPFV*AASSTA
Trigger: GGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCTCCAGCACGCGGATGTaGATCTTTTCTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PFPESQECIDPRPTLHTRSSTRM*IFSFFS
Trigger: GCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGA...GCGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGTGAGGATCCTGCCCTaGGTGGCACGAGCGCTGTCG +
Preference number: 5 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISVRILP*VARALS
Trigger: CGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCAC...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS TCA 90 bp GGTTCCTGCAGCCTACCACAAGCCACACCCCAAGAGAAAATGGCATaGAGGAAGACGTCAGGAGCTCAGGAAGAAGTACTGGTTGTTAAG +
Preference number: 5 (lower is better)
Translates to: GSCSLPQATPQEKMA*RKTSGAQEEVLVVK
Trigger: CTTAACAACCAGTACTTCTTCCTGAGCTCCTGACGTCTTCCTTCATGCCATTTTCTCTTGGGGTGTGGCTTGTGGTAGGCTGCAGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 90 bp GTGAAGGACTCACAAATACCAGAAATTCTGCATTGCTTCCCAAGCTaGACCATAGCTTCCACCCTACACTACCTCAGGGACGCCACCATC +
Preference number: 5 (lower is better)
Translates to: VKDSQIPEILHCFPS*TIASTLHYLRDATI
Trigger: GATGGTGGCGTCCCTGAGGTAGTGTAGGGTGGAAGCTATGGTGCAGCTTGGGAAGCAATGCAGAATTTCTGGTATTTGTGAGTCCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 90 bp GGAGCCTGCTGTGTGAAGGACTCACAAATACCAGAAATTCTGCATTaGTTCCCAAGCTGCACCATAGCTTCCACCCTACACTACCTCAGG +
Preference number: 5 (lower is better)
Translates to: GACCVKDSQIPEILH*FPSCTIASTLHYLR
Trigger: CCTGAGGTAGTGTAGGGTGGAAGCTATGGTGCAGCTTGGGAAGCAATGCAGAATTTCTGGTATTTGTGAGTCCTTCACACAGCAGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS-3UTR CAA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCAGCTGTTGGCTGGTGCTaGGCCTGGCCAAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISAVGWC*AWPKAL
Trigger: CAAGGCCTTTGGCCAGGCCAAGCACCAGCCAACAGC...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCTTGGGTAAAAGACAGTaGATGTGGGGACTGACCGAA +
Preference number: 5 (lower is better)
Translates to: APFPESQECIDPRPTLHTLGKRQ*MWGLTE
Trigger: TTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAA...GGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGTTGGGTAAAAGACAGTaGATGTGGGGACTGACCGAA +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPLGKRQ*MWGLTE
Trigger: TTCGGTCAGTCCCCACATCAACTGTCTTTTACCCAA...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCGCCTCTCAGTACATCTTaGAGCACCTTTCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: TFPRISGMYRPPPHTSYPPLSTS*STFPRI
Trigger: GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGG...CGGGTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CAGCTTGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTCAGCCGCCTCTCAGTACATCTTaGAGCACCTTTCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: QLVQWHPCRYQTSSAAQPPLSTS*STFPRI
Trigger: GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGG...CGGCTGAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS-3UTR CAA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACACGTCGGTGAAAGCTaGTTTCGGGACCGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISHVGES*FRDRVP
Trigger: GGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATGCCTGGCCAAAGGCCTaGCACAGCTCCTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNAWPKA*HSSSTL
Trigger: CAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGC...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AGCACCTTTCCCAGAATCTCAGGAATGTATAGACCCCCGCCCCACACTTCATACCCTCTCAGTACATCTTaGAGCACCTTTCCCAGAATC +
Preference number: 5 (lower is better)
Translates to: STFPRISGMYRPPPHTSYPLSTS*STFPRI
Trigger: GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGG...GTATGAAGTGTGGGGCGGGGGTCTATACATTCCTGAGATTCTGGGAAAGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTCAGGAGGACAGGTGGACGTGTCCACAAATGTGTCTCATCCTCGCAACAGCTCAGCACTAGTTTGTTCTaGGCCAGTATAAGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: VRRTGGRVHKCVSSSQQLSTSLF*ASIRFC
Trigger: GCAAAACCTTATACTGGCCAAGAACAAACTAGTGCT...GAGCTGTTGCGAGGATGAGACACATTTGTGGACACGTCCACCTGTCCTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCTGATACGTAGGCGGTaGGCCGTGTCCTTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRILIRRR*AVSFKA
Trigger: GGCCTTGAAGGACACGGCCAACCGCCTACGTATCAG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCGGAGCTGCATGGCCCTaGGAGAGCACAAAGCGGTCA +
Preference number: 5 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIGAAWP*ESTKRS
Trigger: TGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCC...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp CATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCACTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: HIFTPPLSTSLSTFPRISLGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...TGAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTGGGAGCCGCAGAGGTaGATGTTGCTCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLWEPQR*MLLSEM
Trigger: CATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCA...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp GTTGTCACATGGAGTCCCAGGCCCCATTGGCAAGACCCAGAAATCTGCATTTTATCCAGCACGCGGATGTaGATCTTTTCTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VVTWSPRPHWQDPEICILSSTRM*IFSFFS
Trigger: GCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGA...TAAAATGCAGATTTCTGGGTCTTGCCAATGGGGCCTGGGACTCCATGTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423525.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTTTCTGTCCAGGGGCTaGATGGTGAAGGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLFLSRG*MVKGSS
Trigger: GCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAA...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCTGGGCATGCGGATGTaGGCAATGTCCACTGAGGGT +
Preference number: 5 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRILGMRM*AMSTEG
Trigger: ACCCTCAGTGGACATTGCCAACATCCGCATGCCCAG...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp ACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCGTCACCTGGTCATCCTaGCTCTTCAGGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: TYIYPSSQYIFEHLSQNLVTWSS*LFRTTL
Trigger: CAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGAC...GAGATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS CCA 90 bp GAGTTTGAAATTGTGAGTCAAATGCTAAAGAAAGGGACCTTTAGATaGTGCTTAAGGTCCCAGCTTCAGCTCCTGCACCTGCACCTGCAA +
Preference number: 5 (lower is better)
Translates to: EFEIVSQMLKKGTFR*CLRSQLQLLHLHLQ
Trigger: TTGCAGGTGCAGGTGCAGGAGCTGAAGCTGGGACCTTAAGCACCATCTAAAGGTCCCTTTCTTTAGCATTTGACTCACAATTTCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS-3UTR CAA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCTTCAGGACCACCTaGGCTTGTCCGACCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNLFRTT*ACPTWK
Trigger: CTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCGTCACCTGGTCATCCTaGCTCTTCAGGACCACCTTG +
Preference number: 5 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRIVTWSS*LFRTTL
Trigger: CAAGGTGGTCCTGAAGAGCAAGGATGACCAGGTGAC...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCCTCCTGTGGAGGGGTaGCCAGGATCTTCTTTTTGC +
Preference number: 5 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNPPVEG*PGSSFC
Trigger: GCAAAAAGAAGATCCTGGCAACCCCTCCACAGGAGG...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATGAGAAGGTGGAATTTTaGGTGTCCCCATCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: KTYIYPSSQYIFEHLSQNEKVEF*VSPSRA
Trigger: CGCCCTGGATGGGGACACCAAAAATTCCACCTTCTC...ATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS-3UTR CAA 90 bp AAACATATATTTACCCCTCCTCTCAGTACATCTTTGAGCACCTTTCCCAGAATCTCCAGCACGCGGATGTaGATCTTTTCTTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KHIFTPPLSTSLSTFPRISSTRM*IFSFFS
Trigger: GCTGAAGAAAGAAAAGATCAACATCCGCGTGCTGGA...GATTCTGGGAAAGGTGCTCAAAGATGTACTGAGAGGAGGGGTAAATATATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000450814.6
ENST00000462138.6
CDS CCA 90 bp GAAGTACTGGTTGTTAAGAAACAGAGGTCTAGGACAACAGGGATCTaGCTAATAAGATCTAGAAAAATGGGGGTTGTTGGAATGAGAGGA +
Preference number: 5 (lower is better)
Translates to: EVLVVKKQRSRTTGI*LIRSRKMGVVGMRG
Trigger: TCCTCTCATTCCAACAACCCCCATTTTTCTAGATCTTATTAGCCAGATCCCTGTTGTCCTAGACCTCTGTTTCTTAACAACCAGTACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp GCAGCTTCTGCTGGTCAGGCTTGTGGTAGCTCTCCATaGTGCGGCAGGCGGGGACCGGGCGCACACGCGGAC +
Preference number: 6 (lower is better)
Translates to: AASAGQACGSSP*CGRRGPGAHAD
Trigger: GTCCGCGTGTGCGCCCGGTCCCCGCCTGCCGCACCATGGAGAGCTACCACAAGCCTGACCAGCAGAAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000423525.6
ENST00000450814.6
ENST00000462138.6
ENST00000472528.5
ENST00000483706.1
CDS CCA 72 bp TCCGGGCCCTGCCTGGCTCTGTGTCGGCCCTTCAGCTaGAGCAGGTGGCCGGAGCTGGCAGAGCACACACAG +
Preference number: 6 (lower is better)
Translates to: SGPCLALCRPFS*SRWPELAEHTQ
Trigger: CTGTGTGTGCTCTGCCAGCTCCGGCCACCTGCTCCAGCTGAAGGGCCGACACAGAGCCAGGCAGGGCCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS TCA 72 bp GGCCAGAGCCCGCCGCAGTGGTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCGTGTCCTTCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: GQSPPQWWPGWS*YVGGWPCPSRP
Trigger: AGGCCTTGAAGGACACGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCACCACTGCGGCGGGCTCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296289.10
ENST00000423516.5
ENST00000423525.6
ENST00000450814.6
ENST00000462138.6
ENST00000469678.1
ENST00000483706.1
CDS TCA 72 bp CACTATCTGCCCTGGTGGGGGCCTGGTGGGACATCCTaGGGGCTGCGTGTAGCTAAGAGCTCAGCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: HYLPWWGPGGTS*GLRVAKSSACG
Trigger: CCCGCAGGCTGAGCTCTTAGCTACACGCAGCCCTCAGGATGTCCCACCAGGCCCCCACCAGGGCAGATAGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 72 bp ACCCAGAGCCCGCCGCAGTGGTGGCCTGGATGGAGCTaGTACGTAGGCGGTTGGCCGTGTCCTTCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: TQSPPQWWPGWS*YVGGWPCPSRP
Trigger: AGGCCTTGAAGGACACGGCCAACCGCCTACGTATCAGCTCCATCCAGGCCACCACTGCGGCGGGCTCTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472528.5
CDS GCA 72 bp GTCTGGGCGAGGGGTGAAGGTGGGGAGGGCGGCTTGTaGATACTGACCCGTGATCCCTCGGCCCTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: VWARGEGGEGGL*ILTRDPSALEG
Trigger: ACCTTCAAGGGCCGAGGGATCACGGGTCAGTATGCACAAGCCGCCCTCCCCACCTTCACCCCTCGCCCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 72 bp CCTTTCTTCAGCAGTTCGGCAGCGGCCAAGGCCTCGTaGAGGGTCACCCCAGCCCCGATAACGGTCACCTGG +
Preference number: 6 (lower is better)
Translates to: PFFSSSAAAKAS*RVTPAPITVTW
Trigger: CCAGGTGACCGTTATCGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp TGGATGTGCGGGTCAGAGCTACGTAGCCACAGTGTCTaGGCGAGGGGTGAAGGTGGGGAGGGCGGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: WMCGSELRSHSV*ARGEGGEGGLC
Trigger: GCACAAGCCGCCCTCCCCACCTTCACCCCTCGCCCAGACACTGTGGCTACGTAGCTCTGACCCGCACATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS CCA 72 bp CAGGAGCCTGTTCCTCCTCCCCAGGCTGGGCGGGGCTaGGCACAGGACGTGGCCACCAAACTGAGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: QEPVPPPQAGRG*AQDVATKLRFK
Trigger: TTTGAACCTCAGTTTGGTGGCCACGTCCTGTGCCCAGCCCCGCCCAGCCTGGGGAGGAGGAACAGGCTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS TCA 72 bp CGAGGGGTGAAGGTGGGGAGGGCGGCTTGTGCATACTaGCCCGTGATCCCTCGGCCCTTGAAGGTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: RGVKVGRAACAY*PVIPRPLKVLA
Trigger: TGCCAAGACCTTCAAGGGCCGAGGGATCACGGGTCAGTATGCACAAGCCGCCCTCCCCACCTTCACCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 72 bp AAGCCCACACCTGGGTGCCAGGGAGTGACTTACGCCTaGCTCATTCTCCGGCCTGGGGCAGAACCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: KPTPGCQGVTYA*LILRPGAEPRF
Trigger: GAACCTGGGTTCTGCCCCAGGCCGGAGAATGAGGCAGGCGTAAGTCACTCCCTGGCACCCAGGTGTGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 72 bp TGGAAGGTGAGGCTTGATGTGGTGACGTTGGGGAGCTaGAGCCCGCAGAGTGATCAGAGGCCCACGTGCGGC +
Preference number: 6 (lower is better)
Translates to: WKVRLDVVTLGS*SPQSDQRPTCG
Trigger: GCCGCACGTGGGCCTCTGATCACTCTGCGGGCTGCAGCTCCCCAACGTCACCACATCAAGCCTCACCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp AGACTGGCCCTCTACCTGCCGAGGGCAAGGGAGGAATaGCATCATCCCAGACAGGCAGAGCCCAGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: RLALYLPRAREE*HHPRQAEPSQA
Trigger: TGCCTGGCTGGGCTCTGCCTGTCTGGGATGATGCCATTCCTCCCTTGCCCTCGGCAGGTAGAGGGCCAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 72 bp ACAACACCGAGGAGCCTTCCAGGGAAAGGTCTGCCTTaGCAGCTGGGGTCTGCCCAGGCTCCACCCCACAAC +
Preference number: 6 (lower is better)
Translates to: TTPRSLPGKGLP*QLGSAQAPPHN
Trigger: GTTGTGGGGTGGAGCCTGGGCAGACCCCAGCTGCCAAGGCAGACCTTTCCCTGGAAGGCTCCTCGGTGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CAA 90 bp TCATGCTTGCCAACCCCTTGCACTGGGGCATCTGGTCCAGCTGTGTaGCCCGCAGTATCCAAGAACCCAGAGCGGAGCGTGCAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: SCLPTPCTGASGPAV*PAVSKNPERSVQAL
Trigger: CAGGGCCTGCACGCTCCGCTCTGGGTTCTTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 72 bp ACACCCCAGGTGTCTGGCCTGATGGAAGGTGAGGCTTaGTGTGGTGACGTTGGGGAGCTGCAGCCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: TPQVSGLMEGEA*CGDVGELQPAE
Trigger: CTCTGCGGGCTGCAGCTCCCCAACGTCACCACATCAAGCCTCACCTTCCATCAGGCCAGACACCTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 72 bp GCCCAGGCGATTGATGTCTGGCCTTGTCGAAGTATTTaGCGGTGTAGGCCATCCCACAAGCGGCCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: AQAIDVWPCRSI*RCRPSHKRPRG
Trigger: GCCTCGGGGCCGCTTGTGGGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGACATCAATCGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS GCA 72 bp GGGTGGAGAGGTGTCAACCGCTGGACCGGCCAGGGCTaGCAGGATTCTCAGCAGAGACAGACTGGCAATCAG +
Preference number: 6 (lower is better)
Translates to: GWRGVNRWTGQG*QDSQQRQTGNQ
Trigger: CTGATTGCCAGTCTGTCTCTGCTGAGAATCCTGGCAGCCCTGGCCGGTCCAGCGGTTGACACCTCTCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS GCA 72 bp GACCCTCCAAGTCCCTCCTCTCCTCCTGCCTGTACATaGCCCCACCGGCAGAGGCCAGACGGATCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: DPPSPSSPPACT*PHRQRPDGSEF
Trigger: AAACTCAGATCCGTCTGGCCTCTGCCGGTGGGGGCATGTACAGGCAGGAGGAGAGGAGGGACTTGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 72 bp CAACCCCTTGCACTGGGGCATCTGGTCCAGCTGTGTTaGCCGCAGTATCCAAGAACCCAGAGCGGAGCGTGC +
Preference number: 6 (lower is better)
Translates to: QPLALGHLVQLC*PQYPRTQSGAC
Trigger: GCACGCTCCGCTCTGGGTTCTTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp GAACCCAACTCAGGAGGGTGGAGAGGTGTCAACCGCTaGACCGGCCAGGGCTGCCAGGATTCTCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: EPNSGGWRGVNR*TGQGCQDSQQR
Trigger: TCTCTGCTGAGAATCCTGGCAGCCCTGGCCGGTCCAGCGGTTGACACCTCTCCACCCTCCTGAGTTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CCA 72 bp ATCCTTGCCTGTCTTGGAGAACCCAACTCAGGAGGGTaGAGAGGTGTCAACCGCTGGACCGGCCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ILACLGEPNSGG*RGVNRWTGQGC
Trigger: GCAGCCCTGGCCGGTCCAGCGGTTGACACCTCTCCACCCTCCTGAGTTGGGTTCTCCAAGACAGGCAAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CAA 72 bp CCAACCCCTTGCACTGGGGCATCTGGTCCAGCTGTGTaGCCCGCAGTATCCAAGAACCCAGAGCGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: PTPCTGASGPAV*PAVSKNPERSV
Trigger: CACGCTCCGCTCTGGGTTCTTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 90 bp CAGGGAGAACCACTTGCCACCTCGTTCCCATGGCTGAGCTCATGCTaGCCAACCCCTTGCACTGGGGCATCTGGTCCAGCTGTGTTGCCC +
Preference number: 6 (lower is better)
Translates to: QGEPLATSFPWLSSC*PTPCTGASGPAVLP
Trigger: GGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGTGGTTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 72 bp GCATGGGTTCATCCGCAAAACGCAGTCCTGGAGGCCTaGCCTGAGTCTCAAAGCCTTGCACGGCACCTGCCC +
Preference number: 6 (lower is better)
Translates to: AWVHPQNAVLEA*PESQSLARHLP
Trigger: GGGCAGGTGCCGTGCAAGGCTTTGAGACTCAGGTCAGGCCTCCAGGACTGCGTTTTGCGGATGAACCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS TCA 72 bp CCTTGCACAGCTCCTCCACGCTGTGTCCATCCACGATaGTGGCATGCCAACTGGGGACAGGGGGCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: PCTAPPRCVHPR*WHANWGQGAES
Trigger: ACTCTCTGCCCCCTGTCCCCAGTTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS GCA 72 bp GAGCTCAGTGAGCAGCAAGGGCTGTTTCCCTGGATGTaGGGGTCAGAGCTACGTAGCCACAGTGTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: ELSEQQGLFPWM*GSELRSHSVWA
Trigger: CGCCCAGACACTGTGGCTACGTAGCTCTGACCCGCACATCCAGGGAAACAGCCCTTGCTGCTCACTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS GCA 72 bp CATCCCAGGCCTAGGAATCTGAAGCCCACACCTGGGTaGCAGGGAGTGACTTACGCCTGCCTCATTCTCCGG +
Preference number: 6 (lower is better)
Translates to: HPRPRNLKPTPG*QGVTYACLILR
Trigger: CCGGAGAATGAGGCAGGCGTAAGTCACTCCCTGGCACCCAGGTGTGGGCTTCAGATTCCTAGGCCTGGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp CCCATGGCTGAGCTCATGCTTGCCAACCCCTTGCACTaGGGCATCTGGTCCAGCTGTGTTGCCCGCAGTATC +
Preference number: 6 (lower is better)
Translates to: PMAELMLANPLH*GIWSSCVARSI
Trigger: GATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 72 bp CTCCTCAGCCAATGCTGGGCCCCTGTGCAGAGCAGCTaGTGTTTGGCAACACCGGTGGAGGCTTTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LLSQCWAPVQSS*CLATPVEALRW
Trigger: CCACCTCAAAGCCTCCACCGGTGTTGCCAAACACAAGCTGCTCTGCACAGGGGCCCAGCATTGGCTGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CAA 72 bp CCACTTGCCACCTCGTTCCCATGGCTGAGCTCATGCTaGCCAACCCCTTGCACTGGGGCATCTGGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PLATSFPWLSSC*PTPCTGASGPA
Trigger: AGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 72 bp CCTTGTCCCCAACTTTGTAGCTGGGCAGGCTGGGCATaGGGATGTTGGCAATGTCCACTGAGGGTGCGTCCT +
Preference number: 6 (lower is better)
Translates to: PCPQLCSWAGWA*GCWQCPLRVRP
Trigger: AGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS GCA 72 bp GAACCACTTGCCACCTCGTTCCCATGGCTGAGCTCATaGTTGCCAACCCCTTGCACTGGGGCATCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: EPLATSFPWLSS*LPTPCTGASGP
Trigger: TGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 72 bp CCAAGCCTGAGGCCTTTTAAGAGACCACGTCCCAGCTaGTCTGAGGGACAGCTCTGGGTGTTCTGGGCCACA +
Preference number: 6 (lower is better)
Translates to: PSLRPFKRPRPS*SEGQLWVFWAT
Trigger: TGTGGCCCAGAACACCCAGAGCTGTCCCTCAGAGCAGCTGGGACGTGGTCTCTTAAAAGGCCTCAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp ATGTCCATCTGGTGCTGCAGTGGGGCCGGGTCACTCTaGCCCAGGCGATTGATGTCTGGCCTTGTCGAAGTA +
Preference number: 6 (lower is better)
Translates to: MSIWCCSGAGSL*PRRLMSGLVEV
Trigger: TACTTCGACAAGGCCAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450814.6
CDS CCA 72 bp CCTGGTGAGCTCAGTGAGCAGCAAGGGCTGTTTCCCTaGATGTGCGGGTCAGAGCTACGTAGCCACAGTGTC +
Preference number: 6 (lower is better)
Translates to: PGELSEQQGLFP*MCGSELRSHSV
Trigger: GACACTGTGGCTACGTAGCTCTGACCCGCACATCCAGGGAAACAGCCCTTGCTGCTCACTGAGCTCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000466765.1
CDS CAA 72 bp CTCAGGGACGCCACCATCCACCATTTAGCAGCGAGGTaGGAATCCTCACCAGCTTCCTGGGCAGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LRDATIHHLAAR*ESSPASWAAGA
Trigger: AGCTCCTGCTGCCCAGGAAGCTGGTGAGGATTCCAACCTCGCTGCTAAATGGTGGATGGTGGCGTCCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 90 bp CCTGCACTGGCCGCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTCGATACCAAACATCTTCAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: PALAALGLGDEAPHS*CNGIPVDTKHLQQL
Trigger: GAGCTGCTGAAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGCCAGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423525.6
CDS CAA 90 bp ACTTGCCACCTCGTTCCCATGGCTGAGCTCATGCTTGCCAACCCCTaGCACTGGGGCATCTGGTCCAGCTGTGTTGCCCGCAGTATCCAA +
Preference number: 6 (lower is better)
Translates to: TCHLVPMAELMLANP*HWGIWSSCVARSIQ
Trigger: TTGGATACTGCGGGCAACACAGCTGGACCAGATGCCCCAGTGCAAGGGGTTGGCAAGCATGAGCTCAGCCATGGGAACGAGGTGGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 90 bp CTACACTACCTCAGGGACGCCACCATCCACCATTTAGCAGCGAGGTaGGAATCCTCACCAGCTTCCTGGGCAGCAGGAGCTCCACAGAGC +
Preference number: 6 (lower is better)
Translates to: LHYLRDATIHHLAAR*ESSPASWAAGAPQS
Trigger: GCTCTGTGGAGCTCCTGCTGCCCAGGAAGCTGGTGAGGATTCCAACCTCGCTGCTAAATGGTGGATGGTGGCGTCCCTGAGGTAGTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 90 bp CCACAAAGCAAGTTAGCGGTGGAGCCAGGACTTCAGGAATCTGGCTaGAGTCACGAGGTTATGGACACAGGTCCTGGGGGTGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: PQSKLAVEPGLQESG*SHEVMDTGPGGAAG
Trigger: CCCAGCAGCACCCCCAGGACCTGTGTCCATAACCTCGTGACTCAAGCCAGATTCCTGAAGTCCTGGCTCCACCGCTAACTTGCTTTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS GCA 72 bp CAGGAGCCCCCAAGAAGCTGCAAGTGGTCCAGATCCTaGCCATTTTTAACACCAGAGGGCAGTGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: QEPPRSCKWSRS*PFLTPEGSARQ
Trigger: CTGCCTGGCACTGCCCTCTGGTGTTAAAAATGGGCAGGATCTGGACCACTTGCAGCTTCTTGGGGGCTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS GCA 72 bp GGATGGACTCCTACGTGCCCACCACTCACTGTCTACTaGCTGGTCCTTTGGGAGCTCACAGCTGAGTGGGAA +
Preference number: 6 (lower is better)
Translates to: GWTPTCPPLTVY*LVLWELTAEWE
Trigger: TTCCCACTCAGCTGTGAGCTCCCAAAGGACCAGGCAGTAGACAGTGAGTGGTGGGCACGTAGGAGTCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 72 bp AGTCACAGGCATGGGTTCATCCGCAAAACGCAGTCCTaGAGGCCTGACCTGAGTCTCAAAGCCTTGCACGGC +
Preference number: 6 (lower is better)
Translates to: SHRHGFIRKTQS*RPDLSLKALHG
Trigger: GCCGTGCAAGGCTTTGAGACTCAGGTCAGGCCTCCAGGACTGCGTTTTGCGGATGAACCCATGCCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS TCA 72 bp CAGCAAGCAATAGACTCGGTAGCTGTGGACAGAGAGTaGATCAGGCCAGTCCCTCTCACCTGGACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: QQAIDSVAVDRE*IRPVPLTWTQL
Trigger: CAGCTGGGTCCAGGTGAGAGGGACTGGCCTGATTCACTCTCTGTCCACAGCTACCGAGTCTATTGCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 72 bp TGCAAAGCTGTGATCACAGACCACTCTCCCGTGCTGTaGCCACACTCAGGCCACAGCCTCGTACATACCCGA +
Preference number: 6 (lower is better)
Translates to: CKAVITDHSPVL*PHSGHSLVHTR
Trigger: TCGGGTATGTACGAGGCTGTGGCCTGAGTGTGGTCACAGCACGGGAGAGTGGTCTGTGATCACAGCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460343.5
ENST00000487660.1
ENST00000494523.2
CDS TCA 72 bp AGGGAATGCGAGAGAAAACACCCCAGGTGTCTGGCCTaGTGGAAGGTGAGGCTTGATGTGGTGACGTTGGGG +
Preference number: 6 (lower is better)
Translates to: RECERKHPRCLA*WKVRLDVVTLG
Trigger: CCCCAACGTCACCACATCAAGCCTCACCTTCCATCAGGCCAGACACCTGGGGTGTTTTCTCTCGCATTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 72 bp AGGCCTCCTTACCTTCATAATAATGGTCCTCCACGGTaGGGATCCTGCCCTTGGTGGCACGAGCGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: RPPYLHNNGPPR*GSCPWWHERCR
Trigger: TCGACAGCGCTCGTGCCACCAAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTAAGGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 72 bp GCCGCCCTAGGCCTTGGTGATGAGGCCCCTCACAGCTaGTGCAATGGCATCCCTGTCGATACCAAACATCTT +
Preference number: 6 (lower is better)
Translates to: AALGLGDEAPHS*CNGIPVDTKHL
Trigger: AAGATGTTTGGTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAGGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423525.6
CDS CAA 90 bp CAGGTAGAGGTGTCTGCTGCAGAAATACTCAGTTTGTCGACTGGGTaGGAAGGGACCCTGGCCATCAGAAGGGGAACCCAAGGCCCAGAA +
Preference number: 6 (lower is better)
Translates to: QVEVSAAEILSLSTG*EGTLAIRRGTQGPE
Trigger: TTCTGGGCCTTGGGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACACCTCTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CAA 90 bp CAGGGTCACACACAGGTAGAGGTGTCTGCTGCAGAAATACTCAGTTaGTCGACTGGGTTGGAAGGGACCCTGGCCATCAGAAGGGGAACC +
Preference number: 6 (lower is better)
Translates to: QGHTQVEVSAAEILS*STGLEGTLAIRRGT
Trigger: GGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACACCTCTACCTGTGTGTGACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS TCA 72 bp AGAACCCTCCTTCCTCAAGAACAAAGCGAGCTGACGTaGGATGGTGTGTGGAAGCTCCGAGAGCCACCATGC +
Preference number: 6 (lower is better)
Translates to: RTLLPQEQSELT*DGVWKLREPPC
Trigger: GCATGGTGGCTCTCGGAGCTTCCACACACCATCTCACGTCAGCTCGCTTTGTTCTTGAGGAAGGAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS TCA 72 bp CCTCAAGAACCCTCCTTCCTCAAGAACAAAGCGAGCTaGCGTGAGATGGTGTGTGGAAGCTCCGAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: PQEPSFLKNKAS*REMVCGSSESH
Trigger: GTGGCTCTCGGAGCTTCCACACACCATCTCACGTCAGCTCGCTTTGTTCTTGAGGAAGGAGGGTTCTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS TCA 72 bp AGCCCACTGAAGCCTCACCACGCCATGCTTGGGTGCTaGGCTGGCCCCATTGTACAGACAAATCAACTGAGA +
Preference number: 6 (lower is better)
Translates to: SPLKPHHAMLGC*AGPIVQTNQLR
Trigger: TCTCAGTTGATTTGTCTGTACAATGGGGCCAGCTCAGCACCCAAGCATGGCGTGGTGAGGCTTCAGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS GCA 72 bp GCTCGCCCACTACTGCACTGGACACAGCCTCACCAATaGCACCTAGAAATGAAAGGAGGGGAGTCAGAAGAC +
Preference number: 6 (lower is better)
Translates to: ARPLLHWTQPHQ*HLEMKGGESED
Trigger: GTCTTCTGACTCCCCTCCTTTCATTTCTAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp AAATACTCAGTTTGTCGACTGGGTTGGAAGGGACCCTaGCCATCAGAAGGGGAACCCAAGGCCCAGAACAGG +
Preference number: 6 (lower is better)
Translates to: KYSVCRLGWKGP*PSEGEPKAQNR
Trigger: CCTGTTCTGGGCCTTGGGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 72 bp TTTGTACCTTGTCCCCAACTTTGTAGCTGGGCAGGCTaGGCATGCGGATGTTGGCAATGTCCACTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: FVPCPQLCSWAG*ACGCWQCPLRV
Trigger: CACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGGTACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS CCA 72 bp CCTCCTTCCTCAAGAACAAAGCGAGCTGACGTGAGATaGTGTGTGGAAGCTCCGAGAGCCACCATGCCACAA +
Preference number: 6 (lower is better)
Translates to: PPSSRTKRADVR*CVEAPRATMPQ
Trigger: TTGTGGCATGGTGGCTCTCGGAGCTTCCACACACCATCTCACGTCAGCTCGCTTTGTTCTTGAGGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 72 bp TCTGCCCAGGCTCCACCCCACAACTGCGGCCTCAGCTaGAGTAGTAGAAAGCTTGCAACATTCCTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: SAQAPPHNCGLS*SSRKLATFLFP
Trigger: TGGAAACAGGAATGTTGCAAGCTTTCTACTACTCCAGCTGAGGCCGCAGTTGTGGGGTGGAGCCTGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CAA 72 bp AAGTTAGCGGTGGAGCCAGGACTTCAGGAATCTGGCTaGAGTCACGAGGTTATGGACACAGGTCCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: KLAVEPGLQESG*SHEVMDTGPGG
Trigger: ACCCCCAGGACCTGTGTCCATAACCTCGTGACTCAAGCCAGATTCCTGAAGTCCTGGCTCCACCGCTAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS TCA 72 bp GCCAGGATTCTCAGCAGAGACAGACTGGCAATCAGTTaGCAATGTCTGCCACGTGGCAGTAAGTGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: ARILSRDRLAIS*QCLPRGSKWGV
Trigger: CACACCCCACTTACTGCCACGTGGCAGACATTGTCAACTGATTGCCAGTCTGTCTCTGCTGAGAATCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CCA 72 bp TGTCTGCTGCAGAAATACTCAGTTTGTCGACTGGGTTaGAAGGGACCCTGGCCATCAGAAGGGGAACCCAAG +
Preference number: 6 (lower is better)
Translates to: CLLQKYSVCRLG*KGPWPSEGEPK
Trigger: CTTGGGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 72 bp AGAGGTGTCTGCTGCAGAAATACTCAGTTTGTCGACTaGGTTGGAAGGGACCCTGGCCATCAGAAGGGGAAC +
Preference number: 6 (lower is better)
Translates to: RGVCCRNTQFVD*VGRDPGHQKGN
Trigger: GTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS CCA 72 bp GGTGGCTATTTTGTACCTTGTCCCCAACTTTGTAGCTaGGCAGGCTGGGCATGCGGATGTTGGCAATGTCCA +
Preference number: 6 (lower is better)
Translates to: GGYFVPCPQLCS*AGWACGCWQCP
Trigger: TGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGGGACAAGGTACAAAATAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469678.1
CDS CCA 72 bp CCCCACTCAGAACATCCTCATATACCTGAGTCTACATaGGCAGAACAAGCCACAACCCCTGAGAGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: PHSEHPHIPEST*AEQATTPESRQ
Trigger: CTGCCTGCTCTCAGGGGTTGTGGCTTGTTCTGCCCATGTAGACTCAGGTATATGAGGATGTTCTGAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 72 bp GTGTCTGCTGCAGAAATACTCAGTTTGTCGACTGGGTaGGAAGGGACCCTGGCCATCAGAAGGGGAACCCAA +
Preference number: 6 (lower is better)
Translates to: VSAAEILSLSTG*EGTLAIRRGTQ
Trigger: TTGGGTTCCCCTTCTGATGGCCAGGGTCCCTTCCAACCCAGTCGACAAACTGAGTATTTCTGCAGCAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000461139.5
CDS TCA 72 bp CAGCCAGCCACTGTCCATAGTCCAATTATCTACATTTaGCCCCAGAGTCAAAGCCCATCTCTCCCACTGGGG +
Preference number: 6 (lower is better)
Translates to: QPATVHSPIIYI*PQSQSPSLPLG
Trigger: CCCCAGTGGGAGAGATGGGCTTTGACTCTGGGGTCAAATGTAGATAATTGGACTATGGACAGTGGCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 72 bp GGTCAGTCATCAGGGAACACAGGCCTGCGTATGCTGTaGTACTGCAAGGTAACCCCAAGCATCCTGTTACTT +
Preference number: 6 (lower is better)
Translates to: GQSSGNTGLRML*YCKVTPSILLL
Trigger: AAGTAACAGGATGCTTGGGGTTACCTTGCAGTAGCACAGCATACGCAGGCCTGTGTTCCCTGATGACTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 72 bp GTAAAGGAGCAGCCACGCATGGATATGCAGAACAGATaGCATTTACACTCGAGGGGCAACAGTGTCACCAGG +
Preference number: 6 (lower is better)
Translates to: VKEQPRMDMQNR*HLHSRGNSVTR
Trigger: CCTGGTGACACTGTTGCCCCTCGAGTGTAAATGCCATCTGTTCTGCATATCCATGCGTGGCTGCTCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 90 bp TGGCTGCCAGCAGGAGAAAGAACAGCCATGCAACCTACCTTTGTATaGGCGGCTAGTTCCACTGCCTTCTCTGTAGCAACGCCATCACTT +
Preference number: 6 (lower is better)
Translates to: WLPAGERTAMQPTFV*AASSTAFSVATPSL
Trigger: AAGTGATGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGTAGGTTGCATGGCTGTTCTTTCTCCTGCTGGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS CAA 90 bp GGGAGCCTGCTGTGTGAAGGACTCACAAATACCAGAAATTCTGCATaGCTTCCCAAGCTGCACCATAGCTTCCACCCTACACTACCTCAG +
Preference number: 6 (lower is better)
Translates to: GSLLCEGLTNTRNSA*LPKLHHSFHPTLPQ
Trigger: CTGAGGTAGTGTAGGGTGGAAGCTATGGTGCAGCTTGGGAAGCAATGCAGAATTTCTGGTATTTGTGAGTCCTTCACACAGCAGGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS TCA 72 bp AGCCTACCACAAGCCACACCCCAAGAGAAAATGGCATaGAGGAAGACGTCAGGAGCTCAGGAAGAAGTACTG +
Preference number: 6 (lower is better)
Translates to: SLPQATPQEKMA*RKTSGAQEEVL
Trigger: CAGTACTTCTTCCTGAGCTCCTGACGTCTTCCTTCATGCCATTTTCTCTTGGGGTGTGGCTTGTGGTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 72 bp GCAGGAGAAAGAACAGCCATGCAACCTACCTTTGTATaGGCGGCTAGTTCCACTGCCTTCTCTGTAGCAACG +
Preference number: 6 (lower is better)
Translates to: AGERTAMQPTFV*AASSTAFSVAT
Trigger: CGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGTAGGTTGCATGGCTGTTCTTTCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460243.1
CDS GCA 72 bp GTGAGTCAAATGCTAAAGAAAGGGACCTTTAGATGGTaGTTAAGGTCCCAGCTTCAGCTCCTGCACCTGCAC +
Preference number: 6 (lower is better)
Translates to: VSQMLKKGTFRW*LRSQLQLLHLH
Trigger: GTGCAGGTGCAGGAGCTGAAGCTGGGACCTTAAGCACCATCTAAAGGTCCCTTTCTTTAGCATTTGACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS GCA 72 bp ACACCTGCCCCCTCTTTCGTGCTAAAACATGACATCTaGTGTGTGATTCTATTGCAGGAGAGGCCAATGCCT +
Preference number: 6 (lower is better)
Translates to: TPAPSFVLKHDI*CVILLQERPMP
Trigger: AGGCATTGGCCTCTCCTGCAATAGAATCACACAGCAGATGTCATGTTTTAGCACGAAAGAGGGGGCAGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS GCA 72 bp TCACAAATACCAGAAATTCTGCATTGCTTCCCAAGCTaGACCATAGCTTCCACCCTACACTACCTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SQIPEILHCFPS*TIASTLHYLRD
Trigger: GTCCCTGAGGTAGTGTAGGGTGGAAGCTATGGTGCAGCTTGGGAAGCAATGCAGAATTTCTGGTATTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp ATTGTGAGTCAAATGCTAAAGAAAGGGACCTTTAGATaGTGCTTAAGGTCCCAGCTTCAGCTCCTGCACCTG +
Preference number: 6 (lower is better)
Translates to: IVSQMLKKGTFR*CLRSQLQLLHL
Trigger: CAGGTGCAGGAGCTGAAGCTGGGACCTTAAGCACCATCTAAAGGTCCCTTTCTTTAGCATTTGACTCACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 72 bp GAAATGAACCATGGAGTCAAATATACAGGAAGGAGCTaGGGCAGAGCACCCTTTCTCTTGAAAAGCTATCCT +
Preference number: 6 (lower is better)
Translates to: EMNHGVKYTGRS*GRAPFLLKSYP
Trigger: AGGATAGCTTTTCAAGAGAAAGGGTGCTCTGCCCCAGCTCCTTCCTGTATATTTGACTCCATGGTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CCA 72 bp CATTTCCTACTGAAAGCTGTTCTGGGGTCAGCGCACTaGGTTTGGAATCTGTCTGCTATTAGATTCTTGATG +
Preference number: 6 (lower is better)
Translates to: HFLLKAVLGSAH*VWNLSAIRFLM
Trigger: CATCAAGAATCTAATAGCAGACAGATTCCAAACCCAGTGCGCTGACCCCAGAACAGCTTTCAGTAGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CAA 72 bp CCAAATATGGCCTCTAAATGTTTGTTTCAAACACCATaGTTGGTGACCAGCCAGCCACTGTCCATAGTCCAA +
Preference number: 6 (lower is better)
Translates to: PNMASKCLFQTP*LVTSQPLSIVQ
Trigger: TTGGACTATGGACAGTGGCTGGCTGGTCACCAACAATGGTGTTTGAAACAAACATTTAGAGGCCATATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CCA 72 bp CTACTGAAAGCTGTTCTGGGGTCAGCGCACTGGGTTTaGAATCTGTCTGCTATTAGATTCTTGATGAATTTT +
Preference number: 6 (lower is better)
Translates to: LLKAVLGSAHWV*NLSAIRFLMNF
Trigger: AAAATTCATCAAGAATCTAATAGCAGACAGATTCCAAACCCAGTGCGCTGACCCCAGAACAGCTTTCAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460343.5
ENST00000494523.2
CDS CAA 90 bp TTTATAAGCCCAAATATGGCCTCTAAATGTTTGTTTCAAACACCATaGTTGGTGACCAGCCAGCCACTGTCCATAGTCCAATTATCTACA +
Preference number: 6 (lower is better)
Translates to: FISPNMASKCLFQTP*LVTSQPLSIVQLST
Trigger: TGTAGATAATTGGACTATGGACAGTGGCTGGCTGGTCACCAACAATGGTGTTTGAAACAAACATTTAGAGGCCATATTTGGGCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460343.5
CDS CAA 72 bp ACTATTTTTATAAGCCCAAATATGGCCTCTAAATGTTaGTTTCAAACACCATTGTTGGTGACCAGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: TIFISPNMASKC*FQTPLLVTSQP
Trigger: TGGCTGGCTGGTCACCAACAATGGTGTTTGAAACAAACATTTAGAGGCCATATTTGGGCTTATAAAAATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460343.5