RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TJAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000137221

Ensembl transcript IDs: ENST00000259751.5, ENST00000372444.6, ENST00000372445.9, ENST00000372449.5, ENST00000372452.5, ENST00000436109.6, ENST00000438588.6, ENST00000454762.1, ENST00000483640.5, ENST00000612912.4

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGTTGTGGGATCAAGGGCAGAGGGGTATGAGAGATAGAAGGGCATaGCCTGGAGCTCCAGAGTGGGCTCAGGAAGGAAGGGATGACATG +
Preference number: 1 (lower is better)
Translates to: VLWDQGQRGMRDRRA*PGAPEWAQEGRDDM
Trigger: CATGTCATCCCTTCCTTCCTGAGCCCACTCTGGAGCTCCAGGGCATGCCCTTCTATCTCTCATACCCCTCTGCCCTTGATCCCACAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CCA 90 bp CAGAGGGGTATGAGAGATAGAAGGGCATGCCCTGGAGCTCCAGAGTaGGCTCAGGAAGGAAGGGATGACATGAGGACAGGCAAACAGGAC +
Preference number: 1 (lower is better)
Translates to: QRGMRDRRACPGAPE*AQEGRDDMRTGKQD
Trigger: GTCCTGTTTGCCTGTCCTCATGTCATCCCTTCCTTCCTGAGCCCACTCTGGAGCTCCAGGGCATGCCCTTCTATCTCTCATACCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CAA 90 bp CCTGGACAGTACACGGGACACCAACCAGTGGCAGAGTTGACTGGCTaGAGAGGTGACATGGAGGCAAGAGGAGGGCAAAGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: PGQYTGHQPVAELTG*RGDMEARGGQSGKR
Trigger: CCTCTTCCCACTTTGCCCTCCTCTTGCCTCCATGTCACCTCTCAAGCCAGTCAACTCTGCCACTGGTTGGTGTCCCGTGTACTGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CAA 90 bp GTGATGGGCCCTGGACAGTACACGGGACACCAACCAGTGGCAGAGTaGACTGGCTTGAGAGGTGACATGGAGGCAAGAGGAGGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: VMGPGQYTGHQPVAE*TGLRGDMEARGGQS
Trigger: ACTTTGCCCTCCTCTTGCCTCCATGTCACCTCTCAAGCCAGTCAACTCTGCCACTGGTTGGTGTCCCGTGTACTGTCCAGGGCCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGCTGTGCCAGGCCCCTaGAGGGCAACAGCTCATGCG +
Preference number: 2 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSAVPGP*RATAHA
Trigger: CGCATGAGCTGTTGCCCTCCAGGGGCCTGGCACAGC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCCCAAGGCCAGCTGTaGCAGGCCCCTGGAGGGCAA +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPQGQL*QAPGGQ
Trigger: TTGCCCTCCAGGGGCCTGGCACAGCTGGCCTTGGGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
3UTR-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCTGTGCCAGGCCCCTaGAGGGCAACAGCTCATGCG +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAVPGP*RATAHA
Trigger: CGCATGAGCTGTTGCCCTCCAGGGGCCTGGCACAGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
3UTR-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTTAGGGGTGCTGGGCTaGGCTGGTGGTGGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITLGVLG*AGGGVR
Trigger: CCTCACCCCACCACCAGCCCAGCCCAGCACCCCTAA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGTCAGTCAACGCAGCTaGCAGGCCTGGCATGGCCCA +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITVSQRS*QAWHGP
Trigger: TGGGCCATGCCAGGCCTGTCAGCTGCGTTGACTGAC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
3UTR-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAGCAGGAGAATTGCTTaGAGCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSSRRIA*SREAEV
Trigger: AACCTCCGCCTCCCGGCTTCAAGCAATTCTCCTGCT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAGCAGGAGAATTGCTTaGAGCCGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRASRRIA*SREAEV
Trigger: AACCTCCGCCTCCCGGCTTCAAGCAATTCTCCTGCT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAGCCAGGCGTGGTGGTaGGCGCCTATAATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRASQAWW*APIIPA
Trigger: AGCTGGAATTATAGGCGCCCACCACCACGCCTGGCT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAATACAGTGGGTGTGGTaGAGACGGGGTTGGGTAGGG +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAIQWVW*RRGWVG
Trigger: CCCTACCCAACCCCGTCTCCACCACACCCACTGTAT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCATTGGGGGTAGGGATATaGCTCCCAGCCTGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRALGVGI*LPACLW
Trigger: CCAGAGACAGGCTGGGAGCCATATCCCTACCCCCAA...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACTACAGTGGCCGGAATaGTCTATGTGGGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRALQWPE*SMWAGR
Trigger: CCTCCCTGCCCACATAGACCATTCCGGCCACTGTAG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CAA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATaGGGGGTAGGGATATGGCTCCCAGCCTGTCTCTGGTTACAGCCC +
Preference number: 2 (lower is better)
Translates to: GQSSLPSLSENRNKE*GVGIWLPACLWLQP
Trigger: GGGCTGTAACCAGAGACAGGCTGGGAGCCATATCCCTACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGCATGGCCCACAACCTaGCCCCATCCACACAGGAAA +
Preference number: 2 (lower is better)
Translates to: SALCYLLFLQHASVYTLTAWPTT*PHPHRK
Trigger: TTTCCTGTGTGGATGGGGTCAGGTTGTGGGCCATGC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAGGGACTTGTTGCACTTaGGGAGCTGTACAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAGTCCT*GAVQPG
Trigger: ACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCC...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCATGGCCCACAACCTaGCCCCATCCACACAGGAAA +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAWPTT*PHPHRK
Trigger: TTTCCTGTGTGGATGGGGTCAGGTTGTGGGCCATGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
3UTR-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACCCCTTGGGGTAACATaGTCAGATGGGCCTAATCCT +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAPLGVT*SDGPNP
Trigger: AGGATTAGGCCCATCTGATCATGTTACCCCAAGGGG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGAGCCATTCGCCTCCTaGTTCTACGCTCTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSEPFAS*FYALLK
Trigger: CTTCAAGAGAGCGTAGAATCAGGAGGCGAATGGCTC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTTGGGCCTGAAGCTGTaGGGTCTAGAGTTTACCCCT +
Preference number: 2 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSLGLKL*GLEFTP
Trigger: AGGGGTAAACTCTAGACCCCACAGCTTCAGGCCCAA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAAGCCAGGCGTGGTGGTaGGCGCCTATAATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GQSSLPSLSENRNKELGVSQAWW*APIIPA
Trigger: AGCTGGAATTATAGGCGCCCACCACCACGCCTGGCT...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAGAGGAGTCCTACAGTaGCCGGAATGGTCTATGTGG +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRARGVLQ*PEWSMW
Trigger: CCACATAGACCATTCCGGCCACTGTAGGACTCCTCT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCCCCTTGGGGTAACATaGTCAGATGGGCCTAATCCT +
Preference number: 2 (lower is better)
Translates to: SALCYLLFLQHASVYTLTPLGVT*SDGPNP
Trigger: AGGATTAGGCCCATCTGATCATGTTACCCCAAGGGG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTCTCCAGTTTCCCCACTaGACAATCAGGCTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSLQFPH*TIRLLH
Trigger: ATGGAGAAGCCTGATTGTGCAGTGGGGAAACTGGAG...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTATTAGCCAGGCGTGGTaGTGGGCGCCTATAATTCCA +
Preference number: 2 (lower is better)
Translates to: SALCYLLFLQHASVYTLTISQAW*WAPIIP
Trigger: TGGAATTATAGGCGCCCACCACCACGCCTGGCTAAT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAAAAAGGGAAAACCATaGGGCAAGCTGCTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSKKGKP*GKLLQS
Trigger: TGACTGCAGCAGCTTGCCTCATGGTTTTCCCTTTTT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAACCATGAGGCAAGCTaGTGCAGTCAGTCAACGCAG +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITNHEAS*CSQSTQ
Trigger: CTGCGTTGACTGACTGCAGCAGCTTGCCTCATGGTT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
3UTR-3UTR GCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACCTGTTCTTACAGCATaGCAGTGTGTATACCCTCAC +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAPVLTA*QCVYPH
Trigger: GTGAGGGTATACACACTGGCATGCTGTAAGAACAGG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAATTAGCCAGGCGTGGTaGTGGGCGCCTATAATTCCA +
Preference number: 2 (lower is better)
Translates to: GQSSLPSLSENRNKELGVISQAW*WAPIIP
Trigger: TGGAATTATAGGCGCCCACCACCACGCCTGGCTAAT...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATCTCCCAGCCTGTCTCTaGTTACAGCCCATGTCAGCT +
Preference number: 2 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNLPACL*LQPMSA
Trigger: AGCTGACATGGGCTGTAACCAGAGACAGGCTGGGAG...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCATCCTGGCTAACACGATaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRASWLTR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCATCGTGTTAGCCAGGA...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAAAAAGGGAAAACCATaGGGCAAGCTGCTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITKKGKP*GKLLQS
Trigger: TGACTGCAGCAGCTTGCCTCATGGTTTTCCCTTTTT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
3UTR-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTCCTGGCTAACACGATaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: SALCYLLFLQHASVYTLTSWLTR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCATCGTGTTAGCCAGGA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACAGCCAAAGATAACTTaGCTCATGGCGAAAGTAATG +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAQPKIT*LMAKVM
Trigger: CATTACTTTCGCCATGAGTCAAGTTATCTTTGGCTG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR GCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCATACTTCTTCTACTTCTaGAGGCCACATAAACCTTGG +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAYFFYF*RPHKPW
Trigger: CCAAGGTTTATGTGGCCTGCAGAAGTAGAAGAAGTA...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAAAGAGAGACATCAATaGTCGCAGCCAAAGATAACT +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAKERHQ*SQPKIT
Trigger: AGTTATCTTTGGCTGCGATCATTGATGTCTCTCTTT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGATTCTACGCTCTCTTaGAGCCCATGGAACAATAAA +
Preference number: 2 (lower is better)
Translates to: SALCYLLFLQHASVYTLTDSTLS*SPWNNK
Trigger: TTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCTAGAGTTTACCCCTTaGGGTAACATGATCAGATGG +
Preference number: 2 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITLEFTP*GNMIRW
Trigger: CCATCTGATCATGTTACCCCAAGGGGTAAACTCTAG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTACTAGAGTTTACCCCTTaGGGTAACATGATCAGATGG +
Preference number: 2 (lower is better)
Translates to: GQSSLPSLSENRNKELGVLEFTP*GNMIRW
Trigger: CCATCTGATCATGTTACCCCAAGGGGTAAACTCTAG...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAAGCTTTGGTTAACTTaGCCAAGATTTAAACCCGGA +
Preference number: 2 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAKLWLT*PRFKPG
Trigger: TCCGGGTTTAAATCTTGGCCAAGTTAACCAAAGCTT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR GCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTACTTCTTCTACTTCTaGAGGCCACATAAACCTTGG +
Preference number: 2 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNYFFYF*RPHKPW
Trigger: CCAAGGTTTATGTGGCCTGCAGAAGTAGAAGAAGTA...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CCA 72 bp GCCGGCGAAGCTCTTCATTCTCCTCCTGTAAGAGCCTaGCAGGGTGTTGTGGGATCAAGGGCAGAGGGGTAT +
Preference number: 3 (lower is better)
Translates to: AGEALHSPPVRA*QGVVGSRAEGY
Trigger: ATACCCCTCTGCCCTTGATCCCACAACACCCTGCCAGGCTCTTACAGGAGGAGAATGAAGAGCTTCGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAGGAACACAGCCTGGGTaGGAGGGTCAGGGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAGTQPG*EGQGRK
Trigger: CTTCCTCCCCTGACCCTCCAACCCAGGCTGTGTTCC...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAGCTGAAGCAGGAGAATaGCTTGAAGCCGGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAAEAGE*LEAGRR
Trigger: CCGCCTCCCGGCTTCAAGCAATTCTCCTGCTTCAGC...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CAA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAAGCAGGAGAATTGCTaGAAGCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: SALCYLLFLQHASVYTLTKQENC*KPGGGG
Trigger: ACCTCCGCCTCCCGGCTTCAAGCAATTCTCCTGCTT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCATGGGACTTGTTGCACTaGAGGAGCTGTACAGCCAGG +
Preference number: 3 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAWDLLH*RSCTAR
Trigger: CCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCA...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACAACCAGTGGCAGAGTaGACTGGCTTGAGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAQPVAE*TGLRGD
Trigger: GTCACCTCTCAAGCCAGTCAACTCTGCCACTGGTTG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CCA 72 bp TCCATCTCAGCCTTCTTGATTGCAAAAATCCAGCTGTaGCTAAGAGAGGCCAGTGTGTGCAGCTTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: SISAFLIAKIQL*LREASVCSLSS
Trigger: GGAGGACAAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAATCAAGAAGGCTGAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR GCA 72 bp TGTAGCTCACAGGGCAGCTCTGTGTACTCAGCACTCTaGTATCTCCTGTTCTTACAGCATGCCAGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: CSSQGSSVYSAL*YLLFLQHASVY
Trigger: ATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGAGTACACAGAGCTGCCCTGTGAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAGCAGCCAAAGATAACTaGACTCATGGCGAAAGTAAT +
Preference number: 3 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAAAKDN*THGESN
Trigger: ATTACTTTCGCCATGAGTCAAGTTATCTTTGGCTGC...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR GCA 72 bp CTCCCACCTTTAAGTACCTCTGTGTACTCAGCACTCTaGTATCTCCTGTTCTTACAGCATGCCAGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: LPPLSTSVYSAL*YLLFLQHASVY
Trigger: ATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGAGTACACAGAGGTACTTAAAGGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAAACCATACTTAAGTTaGGAGAATCTGCATAGACCA +
Preference number: 3 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAKPYLS*ENLHRP
Trigger: TGGTCTATGCAGATTCTCCAAACTTAAGTATGGTTT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
3UTR-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAAACCATACTTAAGTTaGGAGAATCTGCATAGACCA +
Preference number: 3 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITKPYLS*ENLHRP
Trigger: TGGTCTATGCAGATTCTCCAAACTTAAGTATGGTTT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGGGCCTCAGTGCGTCTaGTGGCGGAGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTGPQCV*WRRPGA
Trigger: GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTCCATCCTCTTGGGGCTaGGCTGGGGGCGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSPSSWG*AGGDWS
Trigger: GCTCCAGTCGCCCCCAGCGCAGCCCCAAGAGGATGG...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCTCAGTGCGTCTGGTaGCGGAGGCCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPQCVW*RRPGAG
Trigger: GCCGGCGCCTGGCCTCCGCCACCAGACGCACTGAGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGGGCCTCAGTGCGTCTaGTGGCGGAGGCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITGPQCV*WRRPGA
Trigger: GGCGCCTGGCCTCCGCCACCAGACGCACTGAGGCCC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCCCCAAGGCCAGCTGTaGCAGGCCCCTGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTPQGQL*QAPGGQ
Trigger: TTGCCCTCCAGGGGCCTGGCACAGCTGGCCTTGGGG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTTAGGGGTGCTGGGCTaGGCTGGTGGTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSLGVLG*AGGGVR
Trigger: CCTCACCCCACCACCAGCCCAGCCCAGCACCCCTAA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTTCCCCAGGGACGTCTaGCGCCCACTCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSFPRDV*RPLSFP
Trigger: GGGGAAGGAGAGTGGGCGCCAGACGTCCCTGGGGAA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CAA 72 bp CCTGGACAGTACACGGGACACCAACCAGTGGCAGAGTaGACTGGCTTGAGAGGTGACATGGAGGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PGQYTGHQPVAE*TGLRGDMEARG
Trigger: TCCTCTTGCCTCCATGTCACCTCTCAAGCCAGTCAACTCTGCCACTGGTTGGTGTCCCGTGTACTGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGTTCCAGGGCCTCAGTaGGTCTGGTGGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTVPGPQ*VWWRRP
Trigger: TGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAAC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCATCCTCTTGGGGCTaGGCTGGGGGCGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPSSWG*AGGDWS
Trigger: GCTCCAGTCGCCCCCAGCGCAGCCCCAAGAGGATGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTTCAGGCCGCCATCTTaGCGCGGGGCAGGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITFRPPS*RGAGRV
Trigger: TACCCGGCCTGCCCCGCGGCAAGATGGCGGCCTGAA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372444.6
ENST00000372445.9
ENST00000436109.6
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTTAGGGGTGCTGGGCTaGGCTGGTGGTGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLGVLG*AGGGVR
Trigger: CCTCACCCCACCACCAGCCCAGCCCAGCACCCCTAA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGCTGTGCCAGGCCCCTaGAGGGCAACAGCTCATGCG +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTAVPGP*RATAHA
Trigger: CGCATGAGCTGTTGCCCTCCAGGGGCCTGGCACAGC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454762.1
3UTR CAA 72 bp TACACGGGACACCAACCAGTGGCAGAGTTGACTGGCTaGAGAGGTGACATGGAGGCAAGAGGAGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: YTGHQPVAELTG*RGDMEARGGQS
Trigger: ACTTTGCCCTCCTCTTGCCTCCATGTCACCTCTCAAGCCAGTCAACTCTGCCACTGGTTGGTGTCCCGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGTCAGTCAACGCAGCTaGCAGGCCTGGCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTVSQRS*QAWHGP
Trigger: TGGGCCATGCCAGGCCTGTCAGCTGCGTTGACTGAC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCTCCAGGCTCAGCACTaGCACTGTGGGGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLQAQH*HCGALC
Trigger: ACACAGGGCCCCACAGTGTCAGTGCTGAGCCTGGAG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTCCGCCGCTGCCAGCTaGGTTCAGGCCGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSAAAS*VQAAIL
Trigger: CAAGATGGCGGCCTGAACGCAGCTGGCAGCGGCGGA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGTTCCAGGGCCTCAGTaGGTCTGGTGGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITVPGPQ*VWWRRP
Trigger: TGGCCTCCGCCACCAGACGCACTGAGGCCCTGGAAC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGCTGTACAGCCAGGTTaGAGTCCAGCCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSAVQPG*SPAGTA
Trigger: AGCGGTACCGGCTGGACTGCAACCTGGCTGTACAGC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCCAAGCACTCCCCCTaGCAACCAGGGAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAKHSP*QPGRPA
Trigger: AGCTGGCCTCCCTGGTTGGCAGGGGGAGTGCTTGGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGTGCTACAGGCCTGCTaGCCAGTCTGGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSVLQAC*PVWDLE
Trigger: TTCCAGGTCCCAGACTGGGCAGCAGGCCTGTAGCAC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTCAGTGCTACAGGCCTaGTGCCCAGTCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSSVLQA*CPVWDL
Trigger: CAGGTCCCAGACTGGGCAGCAGGCCTGTAGCACTGA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGTCATTCTGGGAGGTaGCGGCTCCTCCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSHSGR*RLLRLL
Trigger: CAGCAGGCGGAGGAGCCGTCACCTCCCAGAATGACT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259751.5
CDS-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGCATGGCCCACAACCTaGCCCCATCCACACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSAWPTT*PHPHRK
Trigger: TTTCCTGTGTGGATGGGGTCAGGTTGTGGGCCATGC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGTCATTCTGGGAGGTaGCGGCTCCTCCGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSHSGR*RLLRRL
Trigger: CAGACGGCGGAGGAGCCGTCACCTCCCAGAATGACT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000372444.6
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGTCAGGGGTTCCTCCTaGTCAAGCCGGGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTVRGSS*SSRDPG
Trigger: TCCTGGATCCCGGCTTGAGCAGGAGGAACCCCTGAC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGCTGTACAGCCAGGTTaGAGTCCAGCCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTAVQPG*SPAGTA
Trigger: AGCGGTACCGGCTGGACTGCAACCTGGCTGTACAGC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCACAGCTCCCGCTCTaGGGTTGGACTGGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPQLPL*GWTGAS
Trigger: ACTTGCCCCAGTCCAACCCCAGAGCGGGAGCTGTGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259751.5
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAGCCAGGCGTGGTGGTaGGCGCCTATAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSSQAWW*APIIPA
Trigger: AGCTGGAATTATAGGCGCCCACCACCACGCCTGGCT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGTCAGGGGTTCCTCCTaGTCAAGCCGGGATCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITVRGSS*SSRDPG
Trigger: TCCTGGATCCCGGCTTGAGCAGGAGGAACCCCTGAC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
CDS-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAGCTCCAGGCAGTCCTaGCCAATTTCCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSSSRQS*PISSSR
Trigger: ACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCTGTACAGCCAGGTTaGAGTCCAGCCGGTACCGCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAVQPG*SPAGTA
Trigger: AGCGGTACCGGCTGGACTGCAACCTGGCTGTACAGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR GCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAGAGATAGAAGGGCATaGCCTGGAGCTCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRARDRRA*PGAPEW
Trigger: CCACTCTGGAGCTCCAGGGCATGCCCTTCTATCTCT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATCCGCCTGTCTGTCAGTaGTACAGGCCTGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNPPVCQ*YRPAAQ
Trigger: CTGGGCAGCAGGCCTGTAGCACTGACAGACAGGCGG...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCTCCCGCTCTGGGGTTaGACTGGGGCAAGTCGCTAT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITLPLWG*TGASRY
Trigger: ATAGCGACTTGCCCCAGTCCAACCCCAGAGCGGGAG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259751.5
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGCAGGTACCCGCTCTaGGGTTGGACTGGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSRYPL*GWTGAS
Trigger: ACTTGCCCCAGTCCAACCCCAGAGCGGGTACCTGCT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372444.6
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTACTAGTGATGGGCCCTaGACAGTACACGGGACACCA +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSTSDGP*TVHGTP
Trigger: TGGTGTCCCGTGTACTGTCCAGGGCCCATCACTAGT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATCCTGGGAACACAGCCTaGGTTGGAGGGTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNPGNTA*VGGSGE
Trigger: CTCCCCTGACCCTCCAACCCAGGCTGTGTTCCCAGG...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACCTCCTGTAAGAGCCTaGCAGGGTGTTGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAPPVRA*QGVVGS
Trigger: TGATCCCACAACACCCTGCCAGGCTCTTACAGGAGG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGGGACTTGTTGCACTTaGGGAGCTGTACAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTGTCCT*GAVQPG
Trigger: ACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGCAGGAGAATTGCTTaGAGCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSRRIA*SREAEV
Trigger: AACCTCCGCCTCCCGGCTTCAAGCAATTCTCCTGCT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTCCAGAGTGCCAAGGCTaGGGAACACTCGTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSPECQG*GTLVKK
Trigger: TTTCTTCACGAGTGTTCCTCAGCCTTGGCACTCTGG...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTCCTGCCTTTCTCCATaGCAGTACTGTCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTSCLSP*QYCHRP
Trigger: GGGCCTGTGACAGTACTGTCATGGAGAAAGGCAGGA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATATGAAACAGAGGGCCTaGGGGGAAAGCGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNMKQRA*GESGWR
Trigger: CCTCCAGCCGCTTTCCCCTCAGGCCCTCTGTTTCAT...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAACCATGAGGCAAGCTaGTGCAGTCAGTCAACGCAG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSNHEAS*CSQSTQ
Trigger: CTGCGTTGACTGACTGCAGCAGCTTGCCTCATGGTT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTTCCCCAAACACTGCTaGCAGGCTGCACCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITFPKHC*QAAPGL
Trigger: GAGTCCTGGTGCAGCCTGGCAGCAGTGTTTGGGGAA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCTGTTCCCCAAACACTaGTGCCAGGCTGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITLFPKH*CQAAPG
Trigger: TCCTGGTGCAGCCTGGCAGCAGTGTTTGGGGAACAG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR GCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACTACCCTCTCCTTCCTaGCCAGGATCTTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRALPSPS*PGSSLS
Trigger: AGAGAGAGAAGATCCTGGGCAGGAAGGAGAGGGTAG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATCCTGGAGGGAAGGAGTaGCACTGGCACCTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNPGGKE*HWHLVG
Trigger: ACCCACTAGGTGCCAGTGGCACTCCTTCCCTCCAGG...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCATACAGTGGGTGTGGTaGAGACGGGGTTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITIQWVW*RRGWVG
Trigger: CCCTACCCAACCCCGTCTCCACCACACCCACTGTAT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAATACAGTGGGTGTGGTaGAGACGGGGTTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVIQWVW*RRGWVG
Trigger: CCCTACCCAACCCCGTCTCCACCACACCCACTGTAT...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTACCCGCTCTGGGGTTaGACTGGGGCAAGTCGCTAT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITYPLWG*TGASRY
Trigger: ATAGCGACTTGCCCCAGTCCAACCCCAGAGCGGGTA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372444.6
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGAGAGGACGGCTGTTaGAGAAGGGGCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITREDGC*RRGSAP
Trigger: AGGAGCTGAGCCCCTTCTCCAACAGCCGTCCTCTCT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCTACAGTGGCCGGAATaGTCTATGTGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITLQWPE*SMWAGR
Trigger: CCTCCCTGCCCACATAGACCATTCCGGCCACTGTAG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTACTACAGTGGCCGGAATaGTCTATGTGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVLQWPE*SMWAGR
Trigger: CCTCCCTGCCCACATAGACCATTCCGGCCACTGTAG...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTATTAGCCAGGCGTGGTaGTGGGCGCCTATAATTCCA +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSISQAW*WAPIIP
Trigger: TGGAATTATAGGCGCCCACCACCACGCCTGGCTAAT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCTCCCAGCCTGTCTCTaGTTACAGCCCATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLPACL*LQPMSA
Trigger: AGCTGACATGGGCTGTAACCAGAGACAGGCTGGGAG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAGAACACAGCCTGGGTTaGAGGGTCAGGGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVEHSLG*RVRGGR
Trigger: TCTTCCTCCCCTGACCCTCCAACCCAGGCTGTGTTC...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTACTGGAGGCAGATGACTaGAAGCACTGGGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVLEADD*KHWVPA
Trigger: GGCAGGAACCCAGTGCTTCCAGTCATCTGCCTCCAG...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAGAGAAGGGAAGAAAGTaGAAACCAGGTGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAEKGRK*KPGVSR
Trigger: GCGGCTGACACCTGGTTTCCACTTTCTTCCCTTCTC...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCAGCTGTGGAAAGGCTaGTCTAAGCTTTCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITQLWKG*SKLSAA
Trigger: AGCGGCGGAAAGCTTAGATCAGCCTTTCCACAGCTG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGGGACTTGTTGCACTTaGGGAGCTGTACAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITGTCCT*GAVQPG
Trigger: ACCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR TCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAAAGTCATTCTGGGAGGTaGCGGCTCCTCCGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPESHSGR*RLLRRL
Trigger: CAGACGGCGGAGGAGCCGTCACCTCCCAGAATGACT...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATAGCAGGAGAATTGCTTaGAGCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNSRRIA*SREAEV
Trigger: AACCTCCGCCTCCCGGCTTCAAGCAATTCTCCTGCT...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTGTCACAGGCCCAGATaGGATACATGTGTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSCHRPR*DTCVCV
Trigger: CACACAGACACATGTATCTCATCTGGGCCTGTGACA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAAACGGCAGGAAGGCCATaGAACAGAGGGCCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPETAGRP*NRGPEG
Trigger: CCCCTCAGGCCCTCTGTTTCATGGCCTTCCTGCCGT...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGCTCCAGGCAGTCCTaGCCAATTTCCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSSRQS*PISSSR
Trigger: ACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCACACTGCTGCCAGGCTaGACCAGGACTCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITTLLPG*TRTLKA
Trigger: AGCTTTCAGAGTCCTGGTGCAGCCTGGCAGCAGTGT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCCATCCGGAAACCATaGCAGATGGAAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPIRKP*QMEAKH
Trigger: GTGCTTGGCTTCCATCTGGCATGGTTTCCGGATGGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCTACCCTCTCCTTCCTaGCCAGGATCTTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLPSPS*PGSSLS
Trigger: AGAGAGAGAAGATCCTGGGCAGGAAGGAGAGGGTAG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTACCCGGATCTGCTGCTaGAGCCAGCATGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTTRICC*SQHVLK
Trigger: TTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCTCTGGGGTTGGACTaGGGCAAGTCGCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITALGLD*GKSLSL
Trigger: AAGAGATAGCGACTTGCCCCAGTCCAACCCCAGAGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTGGCCAGAAGGACTCTaGACGTCTGTTTGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITWPEGL*TSVCRQ
Trigger: CTGCCGACAAACAGACGTCCAGAGTCCTTCTGGCCA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259751.5
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGCAAAAATCCAGCTGTaGCTAAGAGAGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSAKIQL*LREASV
Trigger: CACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGGAAACCATGCCAGATaGAAGCCAAGCACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITGNHAR*KPSTPP
Trigger: AGGGGGAGTGCTTGGCTTCCATCTGGCATGGTTTCC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAGAGGAGTCCTACAGTaGCCGGAATGGTCTATGTGG +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTRGVLQ*PEWSMW
Trigger: CCACATAGACCATTCCGGCCACTGTAGGACTCCTCT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAACTAGTGATGGGCCCTaGACAGTACACGGGACACCA +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVTSDGP*TVHGTP
Trigger: TGGTGTCCCGTGTACTGTCCAGGGCCCATCACTAGT...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTTGGGCCTGAAGCTGTaGGGTCTAGAGTTTACCCCT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLGLKL*GLEFTP
Trigger: AGGGGTAAACTCTAGACCCCACAGCTTCAGGCCCAA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTTCCCCAGGGACGTCTaGCAAGTGTCTGGAGACATT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTFPRDV*QVSGDI
Trigger: AATGTCTCCAGACACTTGCCAGACGTCCCTGGGGAA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
3UTR CAA 72 bp AGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATaGGGGGTAGGGATATGGCTCCCAGCCTGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLPSLSENRNKE*GVGIWLPACLW
Trigger: CCAGAGACAGGCTGGGAGCCATATCCCTACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAAAAAAGGGAAAACCATaGGGCAAGCTGCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAKKGKP*GKLLQS
Trigger: TGACTGCAGCAGCTTGCCTCATGGTTTTCCCTTTTT...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR TCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTACCCCTTGGGGTAACATaGTCAGATGGGCCTAATCCT +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVPLGVT*SDGPNP
Trigger: AGGATTAGGCCCATCTGATCATGTTACCCCAAGGGG...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATAGCTCCAGGCAGTCCTaGCCAATTTCCAGCTCACGT +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNSSRQS*PISSSR
Trigger: ACGTGAGCTGGAAATTGGGCAGGACTGCCTGGAGCT...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCACCCGGATCTGCTGCTaGAGCCAGCATGTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITTRICC*SQHVLK
Trigger: TTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCTCCAGTTTCCCCACTaGACAATCAGGCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLQFPH*TIRLLH
Trigger: ATGGAGAAGCCTGATTGTGCAGTGGGGAAACTGGAG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCATTAGCCAGGCGTGGTaGTGGGCGCCTATAATTCCA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITISQAW*WAPIIP
Trigger: TGGAATTATAGGCGCCCACCACCACGCCTGGCTAAT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGTCTGGAGACATTTTTaGTTGTCGAAACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSVWRHF*LSKPGG
Trigger: CCCTCCAGGTTTCGACAACCAAAAATGTCTCCAGAC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTCGTCTGGCAAGTGTCTaGAGACATTTTTGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSRLASV*RHFWLS
Trigger: CGACAACCAAAAATGTCTCCAGACACTTGCCAGACG...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCATCTCAGCCTTCTTaGTCAGTGTGTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPSQPS*SVCAAC
Trigger: ACAAGCTGCACACACTGATCAAGAAGGCTGAGATGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372452.5
ENST00000436109.6
ENST00000454762.1
CDS-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTCCATCTCAGCCTTCTTaGTTGCAAAAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSPSQPS*LQKSSC
Trigger: ACAGCTGGATTTTTGCAATCAAGAAGGCTGAGATGG...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAACACCGGCCTTTGCAATaGGGAGGCATAGGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEHRPLQ*GGIGLG
Trigger: TCCTAGCCCTATGCCTCCTCATTGCAAAGGCCGGTG...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACTCAGCCTTCTTGATTaGAAAAATCCAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRALSLLD*KNPAVA
Trigger: AGCCACAGCTGGATTTTTGCAATCAAGAAGGCTGAG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCAAAAATCCAGCTGTaGCTAAGAGAGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAKIQL*LREASV
Trigger: CACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372445.9
ENST00000372449.5
ENST00000438588.6
CDS-3UTR CCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATAGAGGAGTCCTACAGTaGCCGGAATGGTCTATGTGG +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNRGVLQ*PEWSMW
Trigger: CCACATAGACCATTCCGGCCACTGTAGGACTCCTCT...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACTAGAGTTTACCCCTTaGGGTAACATGATCAGATGG +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRALEFTP*GNMIRW
Trigger: CCATCTGATCATGTTACCCCAAGGGGTAAACTCTAG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTCTAGAGTTTACCCCTTaGGGTAACATGATCAGATGG +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSLEFTP*GNMIRW
Trigger: CCATCTGATCATGTTACCCCAAGGGGTAAACTCTAG...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGGACAGGGAAACTCCTaGAGTCTTAGTCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTGQGNS*SLSLSL
Trigger: TAGACTCAGACTAAGACTCCAGGAGTTTCCCTGTCC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAGGCCCAAGGCTATTTaGTGTATAATGATGGTCACC +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSRPKAI*CIMMVT
Trigger: GGTGACCATCATTATACACCAAATAGCCTTGGGCCT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCTAGGAGAAGAAATCTaGAAAGGGAGCAACACAGAG +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTLGEEI*KGSNTE
Trigger: CTCTGTGTTGCTCCCTTTTCAGATTTCTTCTCCTAG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCAGATTCTACGCTCTCTTaGAGCCCATGGAACAATAAA +
Preference number: 4 (lower is better)
Translates to: ENLHRPVALEIPLLLGRADSTLS*SPWNNK
Trigger: TTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATC...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCTGTTCTTACAGCATaGCAGTGTGTATACCCTCAC +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPVLTA*QCVYPH
Trigger: GTGAGGGTATACACACTGGCATGCTGTAAGAACAGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR GCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTACCTGTTCTTACAGCATaGCAGTGTGTATACCCTCAC +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVPVLTA*QCVYPH
Trigger: GTGAGGGTATACACACTGGCATGCTGTAAGAACAGG...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATCACATTGCCCAATTCTaGAATAGGTCCGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNHIAQF*NRSGSV
Trigger: GACGGAACCGGACCTATTCCAGAATTGGGCAATGTG...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAGTGTCTGTGTGTTCATaGTCTCAGCACATTGCCCAA +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVVSVCS*SQHIAQ
Trigger: TTGGGCAATGTGCTGAGACCATGAACACACAGACAC...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATGATGACTGGAAGCACTaGGTTCCTGCCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNDDWKH*VPAFLH
Trigger: ATGGAGAAAGGCAGGAACCCAGTGCTTCCAGTCATC...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCCATCTCAGCCTTCTTaGTTGCAAAAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITPSQPS*LQKSSC
Trigger: ACAGCTGGATTTTTGCAATCAAGAAGGCTGAGATGG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372445.9
ENST00000372449.5
ENST00000438588.6
CDS-3UTR TCA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAAAGAGAGACATCAATaGTCGCAGCCAAAGATAACT +
Preference number: 4 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSKERHQ*SQPKIT
Trigger: AGTTATCTTTGGCTGCGATCATTGATGTCTCTCTTT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR TCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAAGAGCCATTCGCCTCCTaGTTCTACGCTCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEEPFAS*FYALLK
Trigger: CTTCAAGAGAGCGTAGAATCAGGAGGCGAATGGCTC...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR TCA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTTTAGCCACAGCTCCTaGAACCAGAGAAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNFSHSS*NQRREE
Trigger: TTCTTCCCTTCTCTGGTTTCAGGAGCTGTGGCTAAA...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCCTCAGCCTTCTTGATTaGAAAAATCCAGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITLSLLD*KNPAVA
Trigger: AGCCACAGCTGGATTTTTGCAATCAAGAAGGCTGAG...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372445.9
ENST00000372449.5
ENST00000438588.6
CDS-3UTR GCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTACTTCTTCTACTTCTaGAGGCCACATAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTYFFYF*RPHKPW
Trigger: CCAAGGTTTATGTGGCCTGCAGAAGTAGAAGAAGTA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR GCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGTGTACTCAGCACTCTaGTATCTCCTGTTCTTACAG +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITVYSAL*YLLFLQ
Trigger: CTGTAAGAACAGGAGATAGCAGAGTGCTGAGTACAC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CCA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGGCAAAAAGCCTCTCTaGTTGGTCAACAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITGKKPL*LVNRKR
Trigger: TCTCTTTCTGTTGACCAACCAGAGAGGCTTTTTGCC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTTCTCTTAGTACTCTTTaGGCAGATAGCTCTGACTAC +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTSLSTL*ADSSDY
Trigger: GTAGTCAGAGCTATCTGCCCAAAGAGTACTAAGAGA...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAATTGGTTGTCGAAACCTaGAGGGAAGGAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPELVVET*REGVPL
Trigger: CAGTGGCACTCCTTCCCTCCAGGTTTCGACAACCAA...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTATCTCTTAGTACTCTTTaGGCAGATAGCTCTGACTAC +
Preference number: 4 (lower is better)
Translates to: GQSSLPSLSENRNKELGVSLSTL*ADSSDY
Trigger: GTAGTCAGAGCTATCTGCCCAAAGAGTACTAAGAGA...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAAGCTTTGGTTAACTTaGCCAAGATTTAAACCCGGA +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTKLWLT*PRFKPG
Trigger: TCCGGGTTTAAATCTTGGCCAAGTTAACCAAAGCTT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR TCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAACTCCCACCACAAATaGTTCCCAATAGAAAATATC +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTNSHHK*FPIENI
Trigger: GATATTTTCTATTGGGAATCATTTGTGGTGGGAGTT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAAGCCTCTCAGAGTTTaGAAACAACTAAGAGATTTG +
Preference number: 4 (lower is better)
Translates to: SALCYLLFLQHASVYTLTKPLRV*KQLRDL
Trigger: CAAATCTCTTAGTTGTTTCCAAACTCTGAGAGGCTT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR GCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAAGTGTACTCAGCACTCTaGTATCTCCTGTTCTTACAG +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEVYSAL*YLLFLQ
Trigger: CTGTAAGAACAGGAGATAGCAGAGTGCTGAGTACAC...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAAGAGATTTGGGGAACATaGGTTACAAATGAGAACACC +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEEIWGT*VTNENT
Trigger: GGTGTTCTCATTTGTAACCCATGTTCCCCAAATCTC...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CCA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAAAAGCTTTGGTTAACTTaGCCAAGATTTAAACCCGGA +
Preference number: 4 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEKLWLT*PRFKPG
Trigger: TCCGGGTTTAAATCTTGGCCAAGTTAACCAAAGCTT...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS GCA 90 bp ACAGCTCCACCAGACCCTCAGGGGCTTTCTCCCATCCGGAAACCATaGCAGATGGAAGCCAAGCACTCCCCCTGCCAACCAGGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TAPPDPQGLSPIRKP*QMEAKHSPCQPGRP
Trigger: TGGCCTCCCTGGTTGGCAGGGGGAGTGCTTGGCTTCCATCTGGCATGGTTTCCGGATGGGAGAAAGCCCCTGAGGGTCTGGTGGAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS CCA 90 bp CACCAGACCCTCAGGGGCTTTCTCCCATCCGGAAACCATGCCAGATaGAAGCCAAGCACTCCCCCTGCCAACCAGGGAGGCCAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: HQTLRGFLPSGNHAR*KPSTPPANQGGQLA
Trigger: AGCAAGCTGGCCTCCCTGGTTGGCAGGGGGAGTGCTTGGCTTCCATCTGGCATGGTTTCCGGATGGGAGAAAGCCCCTGAGGGTCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS CCA 90 bp AGACAGAAGGAGACTGGGCATCTCTCCCGCTCTCTGGACTGGCTGTaGGGTGGGGGCTTTCTTAGCATGACTTCCTGCCACCTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RQKETGHLSRSLDWL*GGGFLSMTSCHLGP
Trigger: TGGGCCCAGGTGGCAGGAAGTCATGCTAAGAAAGCCCCCACCCCACAGCCAGTCCAGAGAGCGGGAGAGATGCCCAGTCTCCTTCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS TCA 90 bp GCAGAGCAGGCTAGGCTCCCCACCTCTCTCCTGGGAGGGAGGCATTaGCAGTTAAACGGGCCTCATACAGGGAAGAGAAAGGAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: AEQARLPTSLLGGRH*QLNGPHTGKRKERV
Trigger: CACCCGCTCCTTTCTCTTCCCTGTATGAGGCCCGTTTAACTGTCAATGCCTCCCTCCCAGGAGAGAGGTGGGGAGCCTAGCCTGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS GCA 90 bp AGGGCGCGGTGGCAGCCAGGGCACCTTGTTGAGCAGGGAGCAAGCTaGAGGCTCAAAAGTAGCCTTCTGATCTCCAGTTCAGGGACTGGA +
Preference number: 5 (lower is better)
Translates to: RARWQPGHLVEQGAS*RLKSSLLISSSGTG
Trigger: TCCAGTCCCTGAACTGGAGATCAGAAGGCTACTTTTGAGCCTGCAGCTTGCTCCCTGCTCAACAAGGTGCCCTGGCTGCCACCGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 90 bp ACAGGCAGTATAAGAGCTGTCCATCCCCTGAGGTTCCAGGGGCTCTaGGCACCAGGCAAGGCAGCTGGTACCTCAACGGCAGTAACTGCA +
Preference number: 5 (lower is better)
Translates to: TGSIRAVHPLRFQGL*APGKAAGTSTAVTA
Trigger: TGCAGTTACTGCCGTTGAGGTACCAGCTGCCTTGCCTGGTGCCCAGAGCCCCTGGAACCTCAGGGGATGGACAGCTCTTATACTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 90 bp CCAACCAGGGAGGCCAGCTTGCTGACCTCAGGCAAAAAGCCTCTCTaGTTGGTCAACAGAAAGAGAGGACGGCTGTTGGAGAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PTREASLLTSGKKPL*LVNRKRGRLLEKGL
Trigger: GAGCCCCTTCTCCAACAGCCGTCCTCTCTTTCTGTTGACCAACCAGAGAGGCTTTTTGCCTGAGGTCAGCAAGCTGGCCTCCCTGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS TCA 90 bp ATGGAAGCCAAGCACTCCCCCTGCCAACCAGGGAGGCCAGCTTGCTaGCCTCAGGCAAAAAGCCTCTCTGGTTGGTCAACAGAAAGAGAG +
Preference number: 5 (lower is better)
Translates to: MEAKHSPCQPGRPAC*PQAKSLSGWSTERE
Trigger: CTCTCTTTCTGTTGACCAACCAGAGAGGCTTTTTGCCTGAGGTCAGCAAGCTGGCCTCCCTGGTTGGCAGGGGGAGTGCTTGGCTTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS CCA 90 bp GCCTGGGCTTGCTGCCACTGGAGCCAAGAAGCTTTGGGTGTTCAGTaGAGACATCAATCAGTACCTCTACCAGAGCCAAGGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: AWACCHWSQEALGVQ*RHQSVPLPEPRAEQ
Trigger: CTGCTCTGCCCTTGGCTCTGGTAGAGGTACTGATTGATGTCTCCACTGAACACCCAAAGCTTCTTGGCTCCAGTGGCAGCAAGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS GCA 90 bp TCAACGGCAGTAACTGCAAACCAGGGGGCTGAAGCCTCCTATGTGTaGAGCTGTTTCCAGCATCAGGCTAGGAGAGGGAAGAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: STAVTANQGAEASYV*SCFQHQARRGKRKQ
Trigger: CTGCTTCCTCTTCCCTCTCCTAGCCTGATGCTGGAAACAGCTGCACACATAGGAGGCTTCAGCCCCCTGGTTTGCAGTTACTGCCGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 90 bp CCACTCCCACAGCCTGGGCTTGCTGCCACTGGAGCCAAGAAGCTTTaGGTGTTCAGTGGAGACATCAATCAGTACCTCTACCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: PLPQPGLAATGAKKL*VFSGDINQYLYQSQ
Trigger: TTGGCTCTGGTAGAGGTACTGATTGATGTCTCCACTGAACACCCAAAGCTTCTTGGCTCCAGTGGCAGCAAGCCCAGGCTGTGGGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCTCCCGCTCTGGGGTaGGACTGGGGCAAGTCGCTA +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAPALG*DWGKSL
Trigger: TAGCGACTTGCCCCAGTCCAACCCCAGAGCGGGAGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000259751.5
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGTGGTGGAGACGGGGTaGGGTAGGGGTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSVVETG*GRGSAS
Trigger: AGAAGCTGAACCCCTACCCAACCCCGTCTCCACCAC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGGAACACAGCCTGGGTaGGAGGGTCAGGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SALCYLLFLQHASVYTLTGTQPG*EGQGRK
Trigger: CTTCCTCCCCTGACCCTCCAACCCAGGCTGTGTTCC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATCCCCAGTCGGGGGAGTaGGAGACACCTGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNPQSGE*ETPGLQ
Trigger: CTGGAGCCCAGGTGTCTCCAACTCCCCCGACTGGGG...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS GCA 90 bp GAGAAGGCCAGGGCAAGGGAGAAGACACACAAACTCAGACGCAACTaGAAAAATCCAGCTGTGGCTAAGAGAGGCCAGTGTGTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: EKARAREKTHKLRRN*KNPAVAKRGQCVQL
Trigger: AAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAGTTGCGTCTGAGTTTGTGTGTCTTCTCCCTTGCCCTGGCCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS GCA 90 bp AGTGTCTGGAGACATTTTTGGTTGTCGAAACCTGGAGGGAAGGAGTaGCACTGGCACCTAGTGGGTAGAAGCCGGGGATGCTTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: SVWRHFWLSKPGGKE*HWHLVGRSRGCFGH
Trigger: ATGACCAAAGCATCCCCGGCTTCTACCCACTAGGTGCCAGTGGCACTCCTTCCCTCCAGGTTTCGACAACCAAAAATGTCTCCAGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGCTGTACAGCCAGGTaGCAGTCCAGCCGGTACCGC +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSCTAR*QSSRYR
Trigger: GCGGTACCGGCTGGACTGCAACCTGGCTGTACAGCT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CAA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAAGCTGTACAGCCAGGTaGCAGTCCAGCCGGTACCGC +
Preference number: 5 (lower is better)
Translates to: GQSSLPSLSENRNKELGVSCTAR*QSSRYR
Trigger: GCGGTACCGGCTGGACTGCAACCTGGCTGTACAGCT...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGTACCCGCTCTGGGGTaGGACTGGGGCAAGTCGCTA +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITVPALG*DWGKSL
Trigger: TAGCGACTTGCCCCAGTCCAACCCCAGAGCGGGTAC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372444.6
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAAGCAGGAGAATTGCTaGAAGCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSKQENC*KPGGGG
Trigger: ACCTCCGCCTCCCGGCTTCAAGCAATTCTCCTGCTT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAGAGCCTGGCAGGGTGTaGTGGGATCAAGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GQSSLPSLSENRNKELGVEPGRV*WDQGQR
Trigger: CCTCTGCCCTTGATCCCACAACACCCTGCCAGGCTC...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGTGGTGGAGACGGGGTaGGGTAGGGGTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITVVETG*GRGSAS
Trigger: AGAAGCTGAACCCCTACCCAACCCCGTCTCCACCAC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CAA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAGTGGTGGAGACGGGGTaGGGTAGGGGTTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GQSSLPSLSENRNKELGVVVETG*GRGSAS
Trigger: AGAAGCTGAACCCCTACCCAACCCCGTCTCCACCAC...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAAGAGAGGACGGCTGTaGGAGAAGGGGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITKRGRL*EKGLSS
Trigger: GGAGCTGAGCCCCTTCTCCAACAGCCGTCCTCTCTT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGCAGAGTTGACTGGCTaGAGAGGTGACATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSAELTG*RGDMEA
Trigger: TGCCTCCATGTCACCTCTCAAGCCAGTCAACTCTGC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCGCTGAAGCAGGAGAATaGCTTGAAGCCGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITAEAGE*LEAGRR
Trigger: CCGCCTCCCGGCTTCAAGCAATTCTCCTGCTTCAGC...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS CCA 90 bp ATACATGTGTCTGTGTGTTCATGGTCTCAGCACATTGCCCAATTCTaGAATAGGTCCGGTTCCGTCCTGTCCCTACTCCACATCGGTCCT +
Preference number: 5 (lower is better)
Translates to: IHVSVCSWSQHIAQF*NRSGSVLSLLHIGP
Trigger: AGGACCGATGTGGAGTAGGGACAGGACGGAACCGGACCTATTCCAGAATTGGGCAATGTGCTGAGACCATGAACACACAGACACATGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAGCCGGTACCGCTCATaGAGCTCTTCCAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SALCYLLFLQHASVYTLTSRYRS*SSSSLL
Trigger: CAACAAGCTGGAAGAGCTCAATGAGCGGTACCGGCT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCACCAGGGAGGCCAGCTaGCTGACCTCAGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITTREAS*LTSGKK
Trigger: CTTTTTGCCTGAGGTCAGCAAGCTGGCCTCCCTGGT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR CAA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTGCAGAGTTGACTGGCTaGAGAGGTGACATGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SALCYLLFLQHASVYTLTAELTG*RGDMEA
Trigger: TGCCTCCATGTCACCTCTCAAGCCAGTCAACTCTGC...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTCAACCAGTGGCAGAGTaGACTGGCTTGAGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: SALCYLLFLQHASVYTLTQPVAE*TGLRGD
Trigger: GTCACCTCTCAAGCCAGTCAACTCTGCCACTGGTTG...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATGCTGAAGCAGGAGAATaGCTTGAAGCCGGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNAEAGE*LEAGRR
Trigger: CCGCCTCCCGGCTTCAAGCAATTCTCCTGCTTCAGC...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CCA 90 bp AGTACTGTCACAGGCCCAGATGAGATACATGTGTCTGTGTGTTCATaGTCTCAGCACATTGCCCAATTCTGGAATAGGTCCGGTTCCGTC +
Preference number: 5 (lower is better)
Translates to: STVTGPDEIHVSVCS*SQHIAQFWNRSGSV
Trigger: GACGGAACCGGACCTATTCCAGAATTGGGCAATGTGCTGAGACCATGAACACACAGACACATGTATCTCATCTGGGCCTGTGACAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTCCATCTCAGCCTTCTaGATCAGTGTGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSSISAF*ISVCSL
Trigger: CAAGCTGCACACACTGATCAAGAAGGCTGAGATGGA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAGCCGGTACCGCTCATaGAGCTCTTCCAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSRYRS*SSSSLL
Trigger: CAACAAGCTGGAAGAGCTCAATGAGCGGTACCGGCT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTGGGACTTGTTGCACTaGAGGAGCTGTACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITWDLLH*RSCTAR
Trigger: CCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCACTCTGGACGTCTGTTaGTCGGCAGCTCTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITTLDVC*SAALSV
Trigger: AACAGAGAGAGCTGCCGACAAACAGACGTCCAGAGT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259751.5
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAACTTATCCTTAAATTaGTCCAGCTCCTCGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSNLSLN*SSSSRL
Trigger: GAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTTGTCTGGAGACATTTTaGGTTGTCGAAACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSCLETF*VVETWR
Trigger: CCTCCAGGTTTCGACAACCAAAAATGTCTCCAGACA...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGAGGCCCAAGGCTATTaGGTGTATAATGATGGTCAC +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSEAQGY*VYNDGH
Trigger: GTGACCATCATTATACACCAAATAGCCTTGGGCCTC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTCCATCTCAGCCTTCTaGATCAGTGTGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSISAF*ISVCSL
Trigger: CAAGCTGCACACACTGATCAAGAAGGCTGAGATGGA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372452.5
ENST00000436109.6
ENST00000454762.1
CDS-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCATCCATCTCAGCCTTCTaGATTGCAAAAATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: ENLHRPVALEIPLLLGRASISAF*IAKIQL
Trigger: CAGCTGGATTTTTGCAATCAAGAAGGCTGAGATGGA...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAACTTATCCTTAAATTaGTCCAGCTCCTCGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITNLSLN*SSSSRL
Trigger: GAGCCGCGAGGAGCTGGACAAATTTAAGGATAAGTT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
ENST00000436109.6
ENST00000438588.6
ENST00000454762.1
CDS-3UTR CAA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAATGGGACTTGTTGCACTaGAGGAGCTGTACAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEWDLLH*RSCTAR
Trigger: CCTGGCTGTACAGCTCCTCAAGTGCAACAAGTCCCA...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTGCAGCCAAAGATAACTaGACTCATGGCGAAAGTAAT +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSAAKDN*THGESN
Trigger: ATTACTTTCGCCATGAGTCAAGTTATCTTTGGCTGC...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454762.1
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAATCTTCAGCTGAAATaGGGGCAGATGCTGCTAACA +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITNLQLK*GQMLLT
Trigger: TGTTAGCAGCATCTGCCCCAATTTCAGCTGAAGATT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259751.5
ENST00000372444.6
ENST00000372445.9
ENST00000372449.5
ENST00000372452.5
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCTCCATCTCAGCCTTCTaGATTGCAAAAATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITSISAF*IAKIQL
Trigger: CAGCTGGATTTTTGCAATCAAGAAGGCTGAGATGGA...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372445.9
ENST00000372449.5
ENST00000438588.6
CDS-3UTR CAA 90 bp GGGGGAAGCAAACAGGTAGGAAACGGAAATGAGGTTAACAATTACACCATCACCAAAAAGCCTCTCTGGTaGGTCAACAGAAAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GGSKQVGNGNEVNNYTITKKPLW*VNRKRG
Trigger: TCCTCTCTTTCTGTTGACCAACCAGAGAGGCTTTTT...GGTGATGGTGTAATTGTTAACCTCATTTCCGTTTCCTACCTGTTTGCTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438588.6
CDS-3UTR CAA 90 bp GAGAATCTGCATAGACCAGTAGCCTTAGAAATACCTCTACTTCTGGGCCGGGCACAAGCCTCTCAGAGTTaGGAAACAACTAAGAGATTT +
Preference number: 5 (lower is better)
Translates to: ENLHRPVALEIPLLLGRAQASQS*ETTKRF
Trigger: AAATCTCTTAGTTGTTTCCAAACTCTGAGAGGCTTG...TGCCCGGCCCAGAAGTAGAGGTATTTCTAAGGCTACTGGTCTATGCAGATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGCCAAGATTTAAACCCGGATCTGCTGCTGCAGCCAGCATGTTCTCAAACTTCTAAACCATACTTAAGTTaGGAGAATCTGCATAGACCA +
Preference number: 5 (lower is better)
Translates to: GQDLNPDLLLQPACSQTSKPYLS*ENLHRP
Trigger: TGGTCTATGCAGATTCTCCAAACTTAAGTATGGTTT...AGAAGTTTGAGAACATGCTGGCTGCAGCAGCAGATCCGGGTTTAAATCTTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454762.1
ENST00000612912.4
CDS-3UTR CAA 90 bp TCAGCACTCTGCTATCTCCTGTTCTTACAGCATGCCAGTGTGTATACCCTCACTAAACAACTAAGAGATTaGGGGAACATGGGTTACAAA +
Preference number: 5 (lower is better)
Translates to: SALCYLLFLQHASVYTLTKQLRD*GNMGYK
Trigger: TTTGTAACCCATGTTCCCCAAATCTCTTAGTTGTTT...AGTGAGGGTATACACACTGGCATGCTGTAAGAACAGGAGATAGCAGAGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp CTGATTCTACGCTCTCTTGAAGCCCATGGAACAATAAAATCCCATTTTCCAGAACATGGTCTCAGCACATaGCCCAATTCTGGAATAGGT +
Preference number: 5 (lower is better)
Translates to: LILRSLEAHGTIKSHFPEHGLST*PNSGIG
Trigger: ACCTATTCCAGAATTGGGCAATGTGCTGAGACCATG...TTCTGGAAAATGGGATTTTATTGTTCCATGGGCTTCAAGAGAGCGTAGAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp GGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATTGGGGGTAAAACCATACTTAAGTTaGGAGAATCTGCATAGACCA +
Preference number: 5 (lower is better)
Translates to: GQSSLPSLSENRNKELGVKPYLS*ENLHRP
Trigger: TGGTCTATGCAGATTCTCCAAACTTAAGTATGGTTT...TACCCCCAATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS-3UTR CAA 90 bp ATGGTAGGGGACAGTCCAGCCTCCCTTCACTATCGGAGAATAGAAATAAAGAATAATAGAAATAAAGAATaGGGGGTAGGGATATGGCTC +
Preference number: 5 (lower is better)
Translates to: MVGDSPASLHYRRIEIKNNRNKE*GVGIWL
Trigger: GAGCCATATCCCTACCCCCAATTCTTTATTTCTATT...ATTCTTTATTTCTATTCTCCGATAGTGAAGGGAGGCTGGACTGTCCCCTACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CCA 72 bp GAGGTTCCAGGGGCTCTGGGCACCAGGCAAGGCAGCTaGTACCTCAACGGCAGTAACTGCAAACCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: EVPGALGTRQGS*YLNGSNCKPGG
Trigger: GCCCCCTGGTTTGCAGTTACTGCCGTTGAGGTACCAGCTGCCTTGCCTGGTGCCCAGAGCCCCTGGAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS TCA 72 bp GAGAACCACGGCAGGAAGGCCATGAAACAGAGGGCCTaGGGGGAAAGCGGCTGGAGGCAGATGACTGGAAGC +
Preference number: 6 (lower is better)
Translates to: ENHGRKAMKQRA*GESGWRQMTGS
Trigger: GCTTCCAGTCATCTGCCTCCAGCCGCTTTCCCCTCAGGCCCTCTGTTTCATGGCCTTCCTGCCGTGGTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CCA 72 bp GAGACTGGGCATCTCTCCCGCTCTCTGGACTGGCTGTaGGGTGGGGGCTTTCTTAGCATGACTTCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: ETGHLSRSLDWL*GGGFLSMTSCH
Trigger: GTGGCAGGAAGTCATGCTAAGAAAGCCCCCACCCCACAGCCAGTCCAGAGAGCGGGAGAGATGCCCAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CAA 72 bp GAAGAGGAAGCAGGGCGCGGTGGCAGCCAGGGCACCTaGTTGAGCAGGGAGCAAGCTGCAGGCTCAAAAGTA +
Preference number: 6 (lower is better)
Translates to: EEEAGRGGSQGT*LSREQAAGSKV
Trigger: TACTTTTGAGCCTGCAGCTTGCTCCCTGCTCAACAAGGTGCCCTGGCTGCCACCGCGCCCTGCTTCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS GCA 72 bp AAAGTGGAAACCAGGTGTCAGCCGCCTGTCTGTCAGTaGTACAGGCCTGCTGCCCAGTCTGGGACCTGGAAG +
Preference number: 6 (lower is better)
Translates to: KVETRCQPPVCQ*YRPAAQSGTWK
Trigger: CTTCCAGGTCCCAGACTGGGCAGCAGGCCTGTAGCACTGACAGACAGGCGGCTGACACCTGGTTTCCACTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CAA 90 bp ACCAGGGAGGCCAGCTTGCTGACCTCAGGCAAAAAGCCTCTCTGGTaGGTCAACAGAAAGAGAGGACGGCTGTTGGAGAAGGGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: TREASLLTSGKKPLW*VNRKRGRLLEKGLS
Trigger: GCTGAGCCCCTTCTCCAACAGCCGTCCTCTCTTTCTGTTGACCAACCAGAGAGGCTTTTTGCCTGAGGTCAGCAAGCTGGCCTCCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS GCA 72 bp GAGTGCCACTGGCACCTAGTGGGTAGAAGCCGGGGATaGTTTGGTCATCCCACAACCATAGGGCAACTCCCA +
Preference number: 6 (lower is better)
Translates to: ECHWHLVGRSRG*FGHPTTIGQLP
Trigger: TGGGAGTTGCCCTATGGTTGTGGGATGACCAAAGCATCCCCGGCTTCTACCCACTAGGTGCCAGTGGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS TCA 72 bp GCTAGGCTCCCCACCTCTCTCCTGGGAGGGAGGCATTaGCAGTTAAACGGGCCTCATACAGGGAAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: ARLPTSLLGGRH*QLNGPHTGKRK
Trigger: CTTTCTCTTCCCTGTATGAGGCCCGTTTAACTGTCAATGCCTCCCTCCCAGGAGAGAGGTGGGGAGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS TCA 72 bp AGCAGGGAGCAAGCTGCAGGCTCAAAAGTAGCCTTCTaGTCTCCAGTTCAGGGACTGGATCTGCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: SREQAAGSKVAF*SPVQGLDLQPP
Trigger: GGGAGGCTGCAGATCCAGTCCCTGAACTGGAGATCAGAAGGCTACTTTTGAGCCTGCAGCTTGCTCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 72 bp CCCCAGGGACGTCTGGCAAGTGTCTGGAGACATTTTTaGTTGTCGAAACCTGGAGGGAAGGAGTGCCACTGG +
Preference number: 6 (lower is better)
Translates to: PQGRLASVWRHF*LSKPGGKECHW
Trigger: CCAGTGGCACTCCTTCCCTCCAGGTTTCGACAACCAAAAATGTCTCCAGACACTTGCCAGACGTCCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS GCA 72 bp TGGCAGCCAGGGCACCTTGTTGAGCAGGGAGCAAGCTaGAGGCTCAAAAGTAGCCTTCTGATCTCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: WQPGHLVEQGAS*RLKSSLLISSS
Trigger: TGAACTGGAGATCAGAAGGCTACTTTTGAGCCTGCAGCTTGCTCCCTGCTCAACAAGGTGCCCTGGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS GCA 72 bp GTAACTGCAAACCAGGGGGCTGAAGCCTCCTATGTGTaGAGCTGTTTCCAGCATCAGGCTAGGAGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: VTANQGAEASYV*SCFQHQARRGK
Trigger: CTTCCCTCTCCTAGCCTGATGCTGGAAACAGCTGCACACATAGGAGGCTTCAGCCCCCTGGTTTGCAGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS GCA 72 bp AGACATTTTTGGTTGTCGAAACCTGGAGGGAAGGAGTaGCACTGGCACCTAGTGGGTAGAAGCCGGGGATGC +
Preference number: 6 (lower is better)
Translates to: RHFWLSKPGGKE*HWHLVGRSRGC
Trigger: GCATCCCCGGCTTCTACCCACTAGGTGCCAGTGGCACTCCTTCCCTCCAGGTTTCGACAACCAAAAATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CCA 72 bp CTCTCTGGTTGGTCAACAGAAAGAGAGGACGGCTGTTaGAGAAGGGGCTCAGCTCCTCTATCTCGCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LSGWSTEREDGC*RRGSAPLSRLF
Trigger: GAACAGGCGAGATAGAGGAGCTGAGCCCCTTCTCCAACAGCCGTCCTCTCTTTCTGTTGACCAACCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS CCA 72 bp GAGGCCAGCTTGCTGACCTCAGGCAAAAAGCCTCTCTaGTTGGTCAACAGAAAGAGAGGACGGCTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: EASLLTSGKKPL*LVNRKRGRLLE
Trigger: CTCCAACAGCCGTCCTCTCTTTCTGTTGACCAACCAGAGAGGCTTTTTGCCTGAGGTCAGCAAGCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS CCA 72 bp TTTTGGTTGTCGAAACCTGGAGGGAAGGAGTGCCACTaGCACCTAGTGGGTAGAAGCCGGGGATGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: FWLSKPGGKECH*HLVGRSRGCFG
Trigger: ACCAAAGCATCCCCGGCTTCTACCCACTAGGTGCCAGTGGCACTCCTTCCCTCCAGGTTTCGACAACCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CAA 72 bp CCTCTCTGGTTGGTCAACAGAAAGAGAGGACGGCTGTaGGAGAAGGGGCTCAGCTCCTCTATCTCGCCTGTT +
Preference number: 6 (lower is better)
Translates to: PLWLVNRKRGRL*EKGLSSSISPV
Trigger: AACAGGCGAGATAGAGGAGCTGAGCCCCTTCTCCAACAGCCGTCCTCTCTTTCTGTTGACCAACCAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438588.6
ENST00000483640.5
CDS TCA 72 bp TGGTACCTCAACGGCAGTAACTGCAAACCAGGGGGCTaGAGCCTCCTATGTGTGCAGCTGTTTCCAGCATCA +
Preference number: 6 (lower is better)
Translates to: WYLNGSNCKPGG*SLLCVQLFPAS
Trigger: TGATGCTGGAAACAGCTGCACACATAGGAGGCTTCAGCCCCCTGGTTTGCAGTTACTGCCGTTGAGGTACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 72 bp CAGCCTGGGCTTGCTGCCACTGGAGCCAAGAAGCTTTaGGTGTTCAGTGGAGACATCAATCAGTACCTCTAC +
Preference number: 6 (lower is better)
Translates to: QPGLAATGAKKL*VFSGDINQYLY
Trigger: GTAGAGGTACTGATTGATGTCTCCACTGAACACCCAAAGCTTCTTGGCTCCAGTGGCAGCAAGCCCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 72 bp CACACAAACTCAGACGCAACTGCAAAAATCCAGCTGTaGCTAAGAGAGGCCAGTGTGTGCAGCTTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: HTNSDATAKIQL*LREASVCSLSS
Trigger: GGAGGACAAGCTGCACACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAGTTGCGTCTGAGTTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 72 bp TGCTGCCACTGGAGCCAAGAAGCTTTGGGTGTTCAGTaGAGACATCAATCAGTACCTCTACCAGAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: CCHWSQEALGVQ*RHQSVPLPEPR
Trigger: CCTTGGCTCTGGTAGAGGTACTGATTGATGTCTCCACTGAACACCCAAAGCTTCTTGGCTCCAGTGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CAA 90 bp GCCCAGATGAGATACATGTGTCTGTGTGTTCATGGTCTCAGCACATaGCCCAATTCTGGAATAGGTCCGGTTCCGTCCTGTCCCTACTCC +
Preference number: 6 (lower is better)
Translates to: AQMRYMCLCVHGLST*PNSGIGPVPSCPYS
Trigger: GGAGTAGGGACAGGACGGAACCGGACCTATTCCAGAATTGGGCAATGTGCTGAGACCATGAACACACAGACACATGTATCTCATCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS GCA 72 bp AGGGCAAGGGAGAAGACACACAAACTCAGACGCAACTaGAAAAATCCAGCTGTGGCTAAGAGAGGCCAGTGT +
Preference number: 6 (lower is better)
Translates to: RAREKTHKLRRN*KNPAVAKRGQC
Trigger: ACACTGGCCTCTCTTAGCCACAGCTGGATTTTTGCAGTTGCGTCTGAGTTTGTGTGTCTTCTCCCTTGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483640.5
CDS CCA 72 bp GCACCTAGCATTTCCAGAAGGAGGCCCAAGGCTATTTaGTGTATAATGATGGTCACCGGCCTTTGCAATGAG +
Preference number: 6 (lower is better)
Translates to: APSISRRRPKAI*CIMMVTGLCNE
Trigger: CTCATTGCAAAGGCCGGTGACCATCATTATACACCAAATAGCCTTGGGCCTCCTTCTGGAAATGCTAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CCA 72 bp ACAGGCCCAGATGAGATACATGTGTCTGTGTGTTCATaGTCTCAGCACATTGCCCAATTCTGGAATAGGTCC +
Preference number: 6 (lower is better)
Translates to: TGPDEIHVSVCS*SQHIAQFWNRS
Trigger: GGACCTATTCCAGAATTGGGCAATGTGCTGAGACCATGAACACACAGACACATGTATCTCATCTGGGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4
CDS CAA 72 bp AGATACATGTGTCTGTGTGTTCATGGTCTCAGCACATaGCCCAATTCTGGAATAGGTCCGGTTCCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: RYMCLCVHGLST*PNSGIGPVPSC
Trigger: ACAGGACGGAACCGGACCTATTCCAGAATTGGGCAATGTGCTGAGACCATGAACACACAGACACATGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612912.4