RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIPARP (Homo sapiens)

Ensembl gene IDs: ENSG00000163659

Ensembl transcript IDs: ENST00000295924.12, ENST00000461166.5, ENST00000473702.5, ENST00000481853.5, ENST00000486483.5, ENST00000495891.1, ENST00000542783.5

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTTGTaGTCCAGCTGGACCACTGGCACAATTTCCAAGTTTGTGTTTCTA +
Preference number: 1 (lower is better)
Translates to: CYLSELRKQHIHQTL*SSWTTGTISKFVFL
Trigger: TAGAAACACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR CCA 90 bp TCTGAACTGAGGAAACAGCATATTCACCAAACGTTGTGCTCCAGCTaGACCACTGGCACAATTTCCAAGTTTGTGTTTCTATTAAGTAAG +
Preference number: 1 (lower is better)
Translates to: SELRKQHIHQTLCSS*TTGTISKFVFLLSK
Trigger: CTTACTTAATAGAAACACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATGCTGTTTCCTCAGTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR TCA 90 bp GTGTGTGGAAGCCCTGATAAGTGCTTAATAAACAGACTGATTCACTaGGACATCAGTACAGATACATCTTGCTTAAACAACACAGAAGTT +
Preference number: 1 (lower is better)
Translates to: VCGSPDKCLINRLIH*DISTDTSCLNNTEV
Trigger: AACTTCTGTGTTGTTTAAGCAAGATGTATCTGTACTGATGTCTCAGTGAATCAGTCTGTTTATTAAGCACTTATCAGGGCTTCCACACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR CCA 90 bp CACCAGAATTTCATGAACTTATACTATACCAAAGCAGTGATGCTTTaGACAGGGAATACGCATGGTAGTACTAGTTCCAGTAAGTTTTAT +
Preference number: 1 (lower is better)
Translates to: HQNFMNLYYTKAVML*TGNTHGSTSSSKFY
Trigger: ATAAAACTTACTGGAACTAGTACTACCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGTATAAGTTCATGAAATTCTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR GCA 90 bp TTTTGTAAATCCAGGTATTTGCTTTTTATAAGGAGTTTACCTAGTTaGTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTTG +
Preference number: 1 (lower is better)
Translates to: FCKSRYLLFIRSLPS*YLSELRKQHIHQTL
Trigger: CAACGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAAAAGCAAATACCTGGATTTACAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR TCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATGCTACCTCTCTGAACTaGGGAAACAGCATATTCACC +
Preference number: 2 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDATSLN*GNSIFT
Trigger: GGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGC...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR CAA 90 bp AGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTaGTGCTCCAGCTGGACCACTGGCACAATTTCCAAGTTTGTGTTT +
Preference number: 2 (lower is better)
Translates to: SCYLSELRKQHIHQT*CSSWTTGTISKFVF
Trigger: AAACACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCCTATTAATGTCCAATaGTGTTCCCCACCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTPINVQ*CSPPSP
Trigger: GGGACTGGGTGGGGAACAGCATTGGACATTAATAGG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR TCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATACTATACCAAAGCAGTaGTGCTTTGGACAGGGAATA +
Preference number: 2 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDTIPKQ*CFGQGI
Trigger: TATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATCACCCATTCAAAACCTaGTACAAATGCTGGATTGAG +
Preference number: 2 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDHPFKT*YKCWIE
Trigger: CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTG...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCTCCAGCTGGACCACTaGCACAATTTCCAAGTTTGT +
Preference number: 2 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTLQLDH*HNFQVC
Trigger: ACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR TCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCACTATACCAAAGCAGTaGTGCTTTGGACAGGGAATA +
Preference number: 2 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLTIPKQ*CFGQGI
Trigger: TATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAAAACCTGCTACAAATaGTGGATTGAGTTCATATCA +
Preference number: 2 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSKTCYK*WIEFIS
Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCCTATTAATGTCCAATaGTGTTCCCCACCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: INRILTLLTASIPFGQTSPINVQ*CSPPSP
Trigger: GGGACTGGGTGGGGAACAGCATTGGACATTAATAGG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCACCTGCTACAAATGCTaGATTGAGTTCATATCAAAT +
Preference number: 2 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSTCYKC*IEFISN
Trigger: ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCCTATTAATGTCCAATaGTGTTCCCCACCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIPINVQ*CSPPSP
Trigger: GGGACTGGGTGGGGAACAGCATTGGACATTAATAGG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGATAGAATCCTCACATTaGTCACAGCCTCCATTCCAT +
Preference number: 2 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTIESSH*SQPPFH
Trigger: ATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTAT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATAAAACCTGCTACAAATaGTGGATTGAGTTCATATCA +
Preference number: 2 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDKTCYK*WIEFIS
Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTTTAACCAAATTAGCTaGCCAACTCCTTCAAATTGG +
Preference number: 2 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLFNQIS*PTPSNW
Trigger: CCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAGCCTCCATTCCATTTaGTCAAACTTCTACCAGGCC +
Preference number: 2 (lower is better)
Translates to: FIRSLPSCYLSELRKQHISLHSI*SNFYQA
Trigger: GGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAAAACCTGCTACAAATaGTGGATTGAGTTCATATCA +
Preference number: 2 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLKTCYK*WIEFIS
Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCACCTGCTACAAATGCTaGATTGAGTTCATATCAAAT +
Preference number: 2 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLTCYKC*IEFISN
Trigger: ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAAAGCAGTGATGCTTTaGACAGGGAATACGCATGGT +
Preference number: 2 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIKAVML*TGNTHG
Trigger: ACCATGCGTATTCCCTGTCCAAAGCATCACTGCTTT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR TCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTACTATACCAAAGCAGTaGTGCTTTGGACAGGGAATA +
Preference number: 2 (lower is better)
Translates to: FIRSLPSCYLSELRKQHITIPKQ*CFGQGI
Trigger: TATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATAAAACCTGCTACAAATaGTGGATTGAGTTCATATCA +
Preference number: 2 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNKTCYK*WIEFIS
Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCTGCTACAAATGCTaGATTGAGTTCATATCAAAT +
Preference number: 2 (lower is better)
Translates to: INRILTLLTASIPFGQTSTCYKC*IEFISN
Trigger: ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTACCTGCTACAAATGCTaGATTGAGTTCATATCAAAT +
Preference number: 2 (lower is better)
Translates to: FIRSLPSCYLSELRKQHITCYKC*IEFISN
Trigger: ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATCAGCCTCCATTCCATTaGGTCAAACTTCTACCAGGC +
Preference number: 3 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDQPPFH*VKLLPG
Trigger: GCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTG...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCAGCCTCCATTCCATTaGGTCAAACTTCTACCAGGC +
Preference number: 3 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLQPPFH*VKLLPG
Trigger: GCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCAAAGCAGTGATGCTTaGGACAGGGAATACGCATGG +
Preference number: 3 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLQSSDA*DREYAW
Trigger: CCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGAATAGAATCCTCACATaGCTCACAGCCTCCATTCCA +
Preference number: 3 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTNRILT*LTASIP
Trigger: TGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCAGCCTCCATTCCATTaGGTCAAACTTCTACCAGGC +
Preference number: 3 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIQPPFH*VKLLPG
Trigger: GCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAATAGAATCCTCACATaGCTCACAGCCTCCATTCCA +
Preference number: 3 (lower is better)
Translates to: FIRSLPSCYLSELRKQHINRILT*LTASIP
Trigger: TGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR CCA 72 bp TTCATGAACTTATACTATACCAAAGCAGTGATGCTTTaGACAGGGAATACGCATGGTAGTACTAGTTCCAGT +
Preference number: 3 (lower is better)
Translates to: FMNLYYTKAVML*TGNTHGSTSSS
Trigger: ACTGGAACTAGTACTACCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGTATAAGTTCATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR GCA 72 bp TCCAGGTATTTGCTTTTTATAAGGAGTTTACCTAGTTaGTACCTCTCTGAACTGAGGAAACAGCATATTCAC +
Preference number: 3 (lower is better)
Translates to: SRYLLFIRSLPS*YLSELRKQHIH
Trigger: GTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAAAAGCAAATACCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR TCA 72 bp AGCCCTGATAAGTGCTTAATAAACAGACTGATTCACTaGGACATCAGTACAGATACATCTTGCTTAAACAAC +
Preference number: 3 (lower is better)
Translates to: SPDKCLINRLIH*DISTDTSCLNN
Trigger: GTTGTTTAAGCAAGATGTATCTGTACTGATGTCTCAGTGAATCAGTCTGTTTATTAAGCACTTATCAGGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR TCA 72 bp AGATTAGGAGTCACTGGTTTACAAGTTATAATTGAATaGAAGAACTGTAACAGCCACAGTTGGCCATTTCAT +
Preference number: 3 (lower is better)
Translates to: RLGVTGLQVIIE*KNCNSHSWPFH
Trigger: ATGAAATGGCCAACTGTGGCTGTTACAGTTCTTTCATTCAATTATAACTTGTAAACCAGTGACTCCTAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGGGGGCTCGCAGAACTaGGCCGCGAAGCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSGGSQN*AAKRGG
Trigger: TCCCCCGCGCTTCGCGGCTCAGTTCTGCGAGCCCCC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGACGACAGGAGCCGAGTaGAAAGCAGTGCCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIETTGAE*KAVPAP
Trigger: CGGCGCGGGCACTGCTTTCCACTCGGCTCCTGTCGT...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295924.12
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGCGTCCAACGGGTCTTaGGGGCTCGCAGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEASNGS*GLAELS
Trigger: GCTCAGTTCTGCGAGCCCCCAAGACCCGTTGGACGC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR GCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGGAGGAGAGGGAGGCTaGACTACACAGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEGGEGG*TTQSGS
Trigger: TGAGCCAGACTGTGTAGTGCAGCCTCCCTCTCCTCC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGCTTCAGTGGAAGGATaGGCTTCCGGTATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEASVEG*ASGIWS
Trigger: GGACCAGATACCGGAAGCCCATCCTTCCACTGAAGC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGAGATCAGTCTGGAAGTaGGCTGGTGTGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIERSVWK*AGVESA
Trigger: GGCAGATTCCACACCAGCTCACTTCCAGACTGATCT...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEGLLMP*LPIVYL
Trigger: CAGATACACAATGGGCAGTCATGGCATGAGAAGGCC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTGCCCATTGTGTATCTaGCCGTCAGCACTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIECPLCI*PSALWP
Trigger: TGGCCAAAGTGCTGACGGGCAGATACACAATGGGCA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGTTCTGGAGCTTCAGTaGAAGGATGGGCTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEVLELQ*KDGLPV
Trigger: TACCGGAAGCCCATCCTTCCACTGAAGCTCCAGAAC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAGATCAGTCTGGAAGTaGGCTGGTGTGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSRSVWK*AGVESA
Trigger: GGCAGATTCCACACCAGCTCACTTCCAGACTGATCT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCTTTGGCCAGAAACATaGAGTGGACTCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIELWPET*SGLLWR
Trigger: CCTCCAAAGGAGTCCACTTCATGTTTCTGGCCAAAG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGAACCCAGCTGTATCTaGCAAAGCAGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEEPSCI*QSRCRS
Trigger: ACTCCTACACCTGCTTTGTCAGATACAGCTGGGTTC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGATTCCATCTTCATGCTaGCGGGACCCGAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEIPSSC*RDPSEF
Trigger: GAATTCACTCGGGTCCCGTCAGCATGAAGATGGAAT...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR TCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTTCGGCGCCTCGGTCTaGTGTATACACCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDFGASV*CIHLPQ
Trigger: CTGTGGCAGGTGTATACATCAGACCGAGGCGCCGAA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATGGAGGAGAGGGAGGCTaGACTACACAGTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDGGEGG*TTQSGS
Trigger: TGAGCCAGACTGTGTAGTGCAGCCTCCCTCTCCTCC...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATGCGGGGGCCTTCTCATaGCATGACTGCCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDAGAFS*HDCPLC
Trigger: ACACAATGGGCAGTCATGGCATGAGAAGGCCCCCGC...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTGGAACCACTCGTTCTaGAGCTTCAGTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEWNHSF*SFSGRM
Trigger: CATCCTTCCACTGAAGCTCCAGAACGAGTGGTTCCA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGCTGTGATCTTGGATTaGAACCACTCGTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEAVILD*NHSFWS
Trigger: GCTCCAGAACGAGTGGTTCCAATCCAAGATCACAGC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCCCACTGAGGGTTTCTaGTGGAAAGCTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSPTEGF*WKAVIL
Trigger: CAAGATCACAGCTTTCCATCAGAAACCCTCAGTGGG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGAAACAGGGACTTGGATaGAGTCCTGAGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEKQGLG*SPEMDA
Trigger: TGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTT...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCCGAGTGGAAAGCAGTaGCCGCGCCGGAGATCAGCG +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNPSGKQ*PRRRSA
Trigger: CGCTGATCTCCGGCGCGGGCACTGCTTTCCACTCGG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295924.12
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGGCAAGACAGTGTGGTaGTTCAAACAATCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSGKTVW*FKQSLP
Trigger: TGGCAGGGATTGTTTGAAGCACCACACTGTCTTGCC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCCAAACATTGTAGCATaGTTTCCACAGACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEPNIVA*FPQTRG
Trigger: CCCTCGAGTCTGTGGAAAGCATGCTACAATGTTTGG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGCGGGGGCCTTCTCATaGCATGACTGCCCATTGTGT +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLAGAFS*HDCPLC
Trigger: ACACAATGGGCAGTCATGGCATGAGAAGGCCCCCGC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATGCTTCAGTGGAAGGATaGGCTTCCGGTATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDASVEG*ASGIWS
Trigger: GGACCAGATACCGGAAGCCCATCCTTCCACTGAAGC...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGCTGTGATCTTGGATTaGAACCACTCGTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSAVILD*NHSFWS
Trigger: GCTCCAGAACGAGTGGTTCCAATCCAAGATCACAGC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGGAAGTGAGCTGGTGTaGAATCTGCCACCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLGSELV*NLPPSH
Trigger: GTGGGACGGTGGCAGATTCCACACCAGCTCACTTCC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGCCAGAAACATGAAGTaGACTCCTTTGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEARNMK*TPLEDF
Trigger: GAAGTCCTCCAAAGGAGTCCACTTCATGTTTCTGGC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGACTGCCAGGATTGACTaGCGGGGGCCTTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTTARID*RGPSHA
Trigger: GGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTCTTCACTTTTGTCCTaGAAGAGCTCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIESSLLS*KSSVLS
Trigger: GCTGAGTACTGAGCTCTTTCAGGACAAAAGTGAAGA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCTTCAATCAATCGAATaGCAGACTCGGGATACTCTC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIELQSIE*QTRDTL
Trigger: GAGAGTATCCCGAGTCTGTCATTCGATTGATTGAAG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAAACAGGGACTTGGATaGAGTCCTGAGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSKQGLG*SPEMDA
Trigger: TGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGCTACCTCTCTGAACTaGGGAAACAGCATATTCACC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSATSLN*GNSIFT
Trigger: GGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATATTCACCAAACGTTGTaGTCCAGCTGGACCACTGGC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDIHQTL*SSWTTG
Trigger: GCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAAT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCAGTTGGCCATTTCATaGCAATGGCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEQLAIS*QWQQTT
Trigger: TGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGTGGAGGAGCTTGTGTaGGAACCCCACCAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLVEELV*EPHQVS
Trigger: AGACACTTGGTGGGGTTCCCACACAAGCTCCTCCAC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAGCCTCCATTCCATTTaGTCAAACTTCTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSSLHSI*SNFYQA
Trigger: GGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCTCCAGCTGGACCACTaGCACAATTTCCAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSLQLDH*HNFQVC
Trigger: ACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
3UTR CAA 72 bp CTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTaGTGCTCCAGCTGGACCACTGGCACAATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSELRKQHIHQT*CSSWTTGTISK
Trigger: CTTGGAAATTGTGCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGTGGGCATGATGAATTaGTTTCCATGGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEVGMMN*FPWLSS
Trigger: TGAAGAAAGCCATGGAAATCAATTCATCATGCCCAC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCTTCAATCAATCGAATaGCAGACTCGGGATACTCTC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSLQSIE*QTRDTL
Trigger: GAGAGTATCCCGAGTCTGTCATTCGATTGATTGAAG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCTCTCTCCTGAAGAATaGATTGTGGAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSLSPEE*IVEDVV
Trigger: CACTACATCCTCCACAATTCATTCTTCAGGAGAGAG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATAGGGTAAAAGTTTGCTaGAGTGACCCCATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDRVKVC*SDPIWA
Trigger: TGCCCAGATGGGGTCACTTCAGCAAACTTTTACCCT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATCTTTGGCCAGAAACATaGAGTGGACTCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDLWPET*SGLLWR
Trigger: CCTCCAAAGGAGTCCACTTCATGTTTCTGGCCAAAG...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTGCCCATTGTGTATCTaGCCGTCAGCACTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLCPLCI*PSALWP
Trigger: TGGCCAAAGTGCTGACGGGCAGATACACAATGGGCA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTTCTCATGCCATGACTaGCCATTGTGTATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDFSCHD*PLCICP
Trigger: CGGGCAGATACACAATGGGCAGTCATGGCATGAGAA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAGGAGTTTACCTAGTTaGTACCTCTCTGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSRSLPS*YLSELR
Trigger: CCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCAGTTGGCCATTTCATaGCAATGGCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSQLAIS*QWQQTT
Trigger: TGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIESISIM*ISSNCS
Trigger: GGAGCAGTTGGAGCTAATCCACATTATGGAAATGGA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCTGCACTACACAGTCTaGCTCAGGTTCGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLLHYTV*LRFGGF
Trigger: GAAACCACCGAACCTGAGCCAGACTGTGTAGTGCAG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTGGGCTTCCGGTATCTaGTCCCCAACATTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDWASGI*SPTFVL
Trigger: TAGGACAAATGTTGGGGACCAGATACCGGAAGCCCA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGTTCTGGAGCTTCAGTaGAAGGATGGGCTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLVLELQ*KDGLPV
Trigger: TACCGGAAGCCCATCCTTCCACTGAAGCTCCAGAAC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCTATGGCAAGACAGTGTaGTGCTTCAAACAATCCCTG +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSYGKTV*CFKQSL
Trigger: CAGGGATTGTTTGAAGCACCACACTGTCTTGCCATA...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGTGGAGGAGCTTGTGTaGGAACCCCACCAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTVEELV*EPHQVS
Trigger: AGACACTTGGTGGGGTTCCCACACAAGCTCCTCCAC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACTGCCAGGATTGACTaGCGGGGGCCTTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSTARID*RGPSHA
Trigger: GGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATACTGCCAGGATTGACTaGCGGGGGCCTTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNTARID*RGPSHA
Trigger: GGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAAAGCAGTGATGCTTTaGACAGGGAATACGCATGGT +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSKAVML*TGNTHG
Trigger: ACCATGCGTATTCCCTGTCCAAAGCATCACTGCTTT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGTGGGCATGATGAATTaGTTTCCATGGCTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSVGMMN*FPWLSS
Trigger: TGAAGAAAGCCATGGAAATCAATTCATCATGCCCAC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCTGCCACCGTCCCACTaGGGGTTTCTGATGGAAAGC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSLPPSH*GFLMES
Trigger: GCTTTCCATCAGAAACCCTCAGTGGGACGGTGGCAG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCTGCCACCGTCCCACTaGGGGTTTCTGATGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNLPPSH*GFLMES
Trigger: GCTTTCCATCAGAAACCCTCAGTGGGACGGTGGCAG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAGTAGGAACATCACTTaGAACTGGGTGCAAAAGATC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSSRNIT*NWVQKI
Trigger: GATCTTTTGCACCCAGTTTCAAGTGATGTTCCTACT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCATTCCGTTCTCTTGGTaGGTGTGGTACTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLIPFSW*VWYCNW
Trigger: CCAGTTGCAGTACCACACTCACCAAGAGAACGGAAT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCACACTCTGCCACTTTTaGGTAGTTGTCCTTTTGATC +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSTLCHF*VVVLLI
Trigger: GATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCTTTGGCCAGAAACATaGAGTGGACTCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLLWPET*SGLLWR
Trigger: CCTCCAAAGGAGTCCACTTCATGTTTCTGGCCAAAG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTGLLMP*LPIVYL
Trigger: CAGATACACAATGGGCAGTCATGGCATGAGAAGGCC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACTGACGGGACCCGAGTaGATTCGGTACAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQILTGPE*IRYKGQ
Trigger: CTGCCCTTTGTACCGAATTCACTCGGGTCCCGTCAG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATAGCTGGTGTGGAATCTaGCACCGTCCCACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNSWCGI*HRPTEG
Trigger: ACCCTCAGTGGGACGGTGGCAGATTCCACACCAGCT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTGCCCATTGTGTATCTaGCCGTCAGCACTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTCPLCI*PSALWP
Trigger: TGGCCAAAGTGCTGACGGGCAGATACACAATGGGCA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCACCCATTCAAAACCTaGTACAAATGCTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSHPFKT*YKCWIE
Trigger: CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCATAGAATCCTCACATTaGTCACAGCCTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSIESSH*SQPPFH
Trigger: ATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTAT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGATTCACCAAACGTTGTaGTCCAGCTGGACCACTGGC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTIHQTL*SSWTTG
Trigger: GCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAAT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTCCAAACTTCTGGGCTaGAGCCCGAAACGCGGGGTA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSSKLLG*SPKRGV
Trigger: TACCCCGCGTTTCGGGCTGCAGCCCAGAAGTTTGGA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGTTCTGGAGCTTCAGTaGAAGGATGGGCTTCCGGTA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTVLELQ*KDGLPV
Trigger: TACCGGAAGCCCATCCTTCCACTGAAGCTCCAGAAC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGGAAGTGAGCTGGTGTaGAATCTGCCACCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSGSELV*NLPPSH
Trigger: GTGGGACGGTGGCAGATTCCACACCAGCTCACTTCC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGACAGCCTTCGTAGTTaGTCAAATTCAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEDSLRS*SNSVVS
Trigger: TGAAACAACTGAATTTGACCAACTACGAAGGCTGTC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATGCCAGAAACATGAAGTaGACTCCTTTGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDARNMK*TPLEDF
Trigger: GAAGTCCTCCAAAGGAGTCCACTTCATGTTTCTGGC...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTACTGCCAGGATTGACTaGCGGGGGCCTTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHITARID*RGPSHA
Trigger: GGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATCTCCAGCTGGACCACTaGCACAATTTCCAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDLQLDH*HNFQVC
Trigger: ACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAG...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTGTAACAGCCACAGTTaGCCATTTCATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDCNSHS*PFHANG
Trigger: GCCATTGGCATGAAATGGCCAACTGTGGCTGTTACA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGATTCCGTTCTCTTGGTaGGTGTGGTACTGCAACTGG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTIPFSW*VWYCNW
Trigger: CCAGTTGCAGTACCACACTCACCAAGAGAACGGAAT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTCCTGGGATGTTCCATaGAATAAATGTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIESWDVP*NKCLSF
Trigger: AAATGAGAGACATTTATTTCATGGAACATCCCAGGA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCTTTGGCCAGAAACATaGAGTGGACTCCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTLWPET*SGLLWR
Trigger: CCTCCAAAGGAGTCCACTTCATGTTTCTGGCCAAAG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAACAGACTGATTCACTaGGACATCAGTACAGATACA +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSNRLIH*DISTDT
Trigger: TGTATCTGTACTGATGTCTCAGTGAATCAGTCTGTT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAGCTGGTGTGGAATCTaGCACCGTCCCACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHISWCGI*HRPTEG
Trigger: ACCCTCAGTGGGACGGTGGCAGATTCCACACCAGCT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGGTCAAAGTTGTGTTTaGAGATTCCATCTACCACAT +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSGQSCV*RFHLPH
Trigger: ATGTGGTAGATGGAATCTGCAAACACAACTTTGACC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATCAGTTGGCCATTTCATaGCAATGGCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDQLAIS*QWQQTT
Trigger: TGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTG...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCTCATCTGTACTCTaGTTCCTAGATCTAAAAACC +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEFSSVL*FLDLKT
Trigger: GGTTTTTAGATCTAGGAACCAGAGTACAGATGAGAA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGCTTCAGTGGAAGGATaGGCTTCCGGTATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNASVEG*ASGIWS
Trigger: GGACCAGATACCGGAAGCCCATCCTTCCACTGAAGC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGTGTGGTACTGCAACTaGTTCACCAGCTCAAACACG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTVWYCN*FTSSNT
Trigger: CGTGTTTGAGCTGGTGAACCAGTTGCAGTACCACAC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGTGGAGGAGCTTGTGTaGGAACCCCACCAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIVEELV*EPHQVS
Trigger: AGACACTTGGTGGGGTTCCCACACAAGCTCCTCCAC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGTGGAGGAGCTTGTGTaGGAACCCCACCAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNVEELV*EPHQVS
Trigger: AGACACTTGGTGGGGTTCCCACACAAGCTCCTCCAC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAGCCTCCATTCCATTTaGTCAAACTTCTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLSLHSI*SNFYQA
Trigger: GGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATAAGTCTTCAATGGAGTaGTCTTCTCAGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDKSSME*SSQRVS
Trigger: TGAGACTCTCTGAGAAGATCACTCCATTGAAGACTT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAAGATCAGTCTGGAAGTaGGCTGGTGTGGAATCTGCC +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIRSVWK*AGVESA
Trigger: GGCAGATTCCACACCAGCTCACTTCCAGACTGATCT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCTTTTGATCTGCCAATaGTATGGCAAGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLLLICQ*YGKTVW
Trigger: CCACACTGTCTTGCCATATCATTGGCAGATCAAAAG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSGLLMP*LPIVYL
Trigger: CAGATACACAATGGGCAGTCATGGCATGAGAAGGCC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGCTACCTCTCTGAACTaGGGAAACAGCATATTCACC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTATSLN*GNSIFT
Trigger: GGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCTTGCAGAAAGTCCATaGAAATTTCAATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSLAESP*KFQFRS
Trigger: AGAACGGAATTGAAATTTGCATGGACTTTCTGCAAG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTGCCATAAATACAAGTaGCTTGCAGAAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDCHKYK*LAESPC
Trigger: GCATGGACTTTCTGCAAGGCACTTGTATTTATGGCA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATCATGGCATTCAAATCTaGCCAAAATTCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDHGIQI*PKFLSS
Trigger: GGAGGACAAGAATTTTGGGCAGATTTGAATGCCATG...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCCAAACATTGTAGCATaGTTTCCACAGACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTPNIVA*FPQTRG
Trigger: CCCTCGAGTCTGTGGAAAGCATGCTACAATGTTTGG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATATAGAATCCTCACATTaGTCACAGCCTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDIESSH*SQPPFH
Trigger: ATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTAT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTATTCACCAAACGTTGTaGTCCAGCTGGACCACTGGC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSIHQTL*SSWTTG
Trigger: GCCAGTGGTCCAGCTGGAGCACAACGTTTGGTGAAT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAGGAGTTTACCTAGTTaGTACCTCTCTGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLRSLPS*YLSELR
Trigger: CCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGGAAGCCCTGATAAGTaGTTAATAAACAGACTGATT +
Preference number: 4 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSGSPDK*LINRLI
Trigger: AATCAGTCTGTTTATTAAGCACTTATCAGGGCTTCC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDSISIM*ISSNCS
Trigger: GGAGCAGTTGGAGCTAATCCACATTATGGAAATGGA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCAAAGAAACTGGTTTTaGACTCTCAATATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEQRNWF*TLNICK
Trigger: TTTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGCCAGAAACATGAAGTaGACTCCTTTGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTARNMK*TPLEDF
Trigger: GAAGTCCTCCAAAGGAGTCCACTTCATGTTTCTGGC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGAGCCTCCATTCCATTTaGTCAAACTTCTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTSLHSI*SNFYQA
Trigger: GGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAAAGCAGTGATGCTTTaGACAGGGAATACGCATGGT +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLKAVML*TGNTHG
Trigger: ACCATGCGTATTCCCTGTCCAAAGCATCACTGCTTT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTGTAACAGCCACAGTTaGCCATTTCATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTCNSHS*PFHANG
Trigger: GCCATTGGCATGAAATGGCCAACTGTGGCTGTTACA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAAGGGTAAAAGTTTGCTaGAGTGACCCCATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIRVKVC*SDPIWA
Trigger: TGCCCAGATGGGGTCACTTCAGCAAACTTTTACCCT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTAGGGTAAAAGTTTGCTaGAGTGACCCCATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSRVKVC*SDPIWA
Trigger: TGCCCAGATGGGGTCACTTCAGCAAACTTTTACCCT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGAACCCAGCTGTATCTaGCAAAGCAGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSEPSCI*QSRCRS
Trigger: ACTCCTACACCTGCTTTGTCAGATACAGCTGGGTTC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGAACCCAGCTGTATCTaGCAAAGCAGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNEPSCI*QSRCRS
Trigger: ACTCCTACACCTGCTTTGTCAGATACAGCTGGGTTC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGAACCCAGCTGTATCTaGCAAAGCAGGTGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIEPSCI*QSRCRS
Trigger: ACTCCTACACCTGCTTTGTCAGATACAGCTGGGTTC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTTCTCATGCCATGACTaGCCATTGTGTATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSFSCHD*PLCICP
Trigger: CGGGCAGATACACAATGGGCAGTCATGGCATGAGAA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCCTATTAATGTCCAATaGTGTTCCCCACCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNPINVQ*CSPPSP
Trigger: GGGACTGGGTGGGGAACAGCATTGGACATTAATAGG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACCTATTAATGTCCAATaGTGTTCCCCACCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIPINVQ*CSPPSP
Trigger: GGGACTGGGTGGGGAACAGCATTGGACATTAATAGG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTCAGAGAGTCTCATTTaGCATGAAAAGTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDSESLI*HEKSSG
Trigger: TCCTGATGACTTTTCATGCCAAATGAGACTCTCTGA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTGGGCTTCCGGTATCTaGTCCCCAACATTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNWASGI*SPTFVL
Trigger: TAGGACAAATGTTGGGGACCAGATACCGGAAGCCCA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATGGGCTTCCGGTATCTaGTCCCCAACATTTGTCCTA +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIWASGI*SPTFVL
Trigger: TAGGACAAATGTTGGGGACCAGATACCGGAAGCCCA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGCTGTGATCTTGGATTaGAACCACTCGTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSAVILD*NHSFWS
Trigger: GCTCCAGAACGAGTGGTTCCAATCCAAGATCACAGC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTACTCAGCTTATCACTaGTGTCCAGAATGTATTGGA +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDYSAYH*CPECIG
Trigger: TCCAATACATTCTGGACACCAGTGATAAGCTGAGTA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGTGTGGTACTGCAACTaGTTCACCAGCTCAAACACG +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIVWYCN*FTSSNT
Trigger: CGTGTTTGAGCTGGTGAACCAGTTGCAGTACCACAC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGAAGTCTTCAATGGAGTaGTCTTCTCAGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTKSSME*SSQRVS
Trigger: TGAGACTCTCTGAGAAGATCACTCCATTGAAGACTT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGAGTAGGAACATCACTTaGAACTGGGTGCAAAAGATC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTSRNIT*NWVQKI
Trigger: GATCTTTTGCACCCAGTTTCAAGTGATGTTCCTACT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGACACTCTGCCACTTTTaGGTAGTTGTCCTTTTGATC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTTLCHF*VVVLLI
Trigger: GATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTAAACAGGGACTTGGATaGAGTCCTGAGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSKQGLG*SPEMDA
Trigger: TGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGCTACCTCTCTGAACTaGGGAAACAGCATATTCACC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNATSLN*GNSIFT
Trigger: GGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTGCCATAAATACAAGTaGCTTGCAGAAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTCHKYK*LAESPC
Trigger: GCATGGACTTTCTGCAAGGCACTTGTATTTATGGCA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTGGCAAGACAGTGTGGTaGTTCAAACAATCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIGKTVW*FKQSLP
Trigger: TGGCAGGGATTGTTTGAAGCACCACACTGTCTTGCC...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCCAAACATTGTAGCATaGTTTCCACAGACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNPNIVA*FPQTRG
Trigger: CCCTCGAGTCTGTGGAAAGCATGCTACAATGTTTGG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACCAAACATTGTAGCATaGTTTCCACAGACTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIPNIVA*FPQTRG
Trigger: CCCTCGAGTCTGTGGAAAGCATGCTACAATGTTTGG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCACCCATTCAAAACCTaGTACAAATGCTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTHPFKT*YKCWIE
Trigger: CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTTTAACCAAATTAGCTaGCCAACTCCTTCAAATTGG +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDFNQIS*PTPSNW
Trigger: CCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATAAAACAAGTCTTCAATaGAGTGATCTTCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDKTSLQ*SDLLRE
Trigger: CTCTCTGAGAAGATCACTCCATTGAAGACTTGTTTT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTGGAACCACTCGTTCTaGAGCTTCAGTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIWNHSF*SFSGRM
Trigger: CATCCTTCCACTGAAGCTCCAGAACGAGTGGTTCCA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGACAGCCTTCGTAGTTaGTCAAATTCAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLDSLRS*SNSVVS
Trigger: TGAAACAACTGAATTTGACCAACTACGAAGGCTGTC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTGTAACAGCCACAGTTaGCCATTTCATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNCNSHS*PFHANG
Trigger: GCCATTGGCATGAAATGGCCAACTGTGGCTGTTACA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTCTTCACTTTTGTCCTaGAAGAGCTCAGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNSSLLS*KSSVLS
Trigger: GCTGAGTACTGAGCTCTTTCAGGACAAAAGTGAAGA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACTTTTGATCTGCCAATaGTATGGCAAGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQILLICQ*YGKTVW
Trigger: CCACACTGTCTTGCCATATCATTGGCAGATCAAAAG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCTCTCTCCTGAAGAATaGATTGTGGAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNLSPEE*IVEDVV
Trigger: CACTACATCCTCCACAATTCATTCTTCAGGAGAGAG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCTCTCTCCTGAAGAATaGATTGTGGAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSLSPEE*IVEDVV
Trigger: CACTACATCCTCCACAATTCATTCTTCAGGAGAGAG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAAACAGGGACTTGGATaGAGTCCTGAGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIKQGLG*SPEMDA
Trigger: TGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTCCTGGGATGTTCCATaGAATAAATGTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLSWDVP*NKCLSF
Trigger: AAATGAGAGACATTTATTTCATGGAACATCCCAGGA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGAACAGACTGATTCACTaGGACATCAGTACAGATACA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTNRLIH*DISTDT
Trigger: TGTATCTGTACTGATGTCTCAGTGAATCAGTCTGTT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGGTCAAAGTTGTGTTTaGAGATTCCATCTACCACAT +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTGQSCV*RFHLPH
Trigger: ATGTGGTAGATGGAATCTGCAAACACAACTTTGACC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGGAAGCCCTGATAAGTaGTTAATAAACAGACTGATT +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLGSPDK*LINRLI
Trigger: AATCAGTCTGTTTATTAAGCACTTATCAGGGCTTCC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCAGTTGGCCATTTCATaGCAATGGCAGCAAACAACA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSQLAIS*QWQQTT
Trigger: TGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGCCACAGGCTCTAAGTaGCTAAGAAGTGTAAACCAA +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIATGSK*LRSVNQ
Trigger: TTGGTTTACACTTCTTAGGCACTTAGAGCCTGTGGC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTCAGAGAGTCTCATTTaGCATGAAAAGTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTSESLI*HEKSSG
Trigger: TCCTGATGACTTTTCATGCCAAATGAGACTCTCTGA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTTCTCATCTGTACTCTaGTTCCTAGATCTAAAAACC +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLFSSVL*FLDLKT
Trigger: GGTTTTTAGATCTAGGAACCAGAGTACAGATGAGAA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTACTCAGCTTATCACTaGTGTCCAGAATGTATTGGA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTYSAYH*CPECIG
Trigger: TCCAATACATTCTGGACACCAGTGATAAGCTGAGTA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTATGGCAAGACAGTGTaGTGCTTCAAACAATCCCTG +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSYGKTV*CFKQSL
Trigger: CAGGGATTGTTTGAAGCACCACACTGTCTTGCCATA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTCAGACCCCGAGAGTTaGCTTCTTCAATCAATCGAA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSSDPES*LLQSIE
Trigger: TTCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTGCCAGAAACATGAAGTaGACTCCTTTGGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIARNMK*TPLEDF
Trigger: GAAGTCCTCCAAAGGAGTCCACTTCATGTTTCTGGC...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCTCCAGCTGGACCACTaGCACAATTTCCAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHILQLDH*HNFQVC
Trigger: ACAAACTTGGAAATTGTGCCAGTGGTCCAGCTGGAG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTGTAACAGCCACAGTTaGCCATTTCATGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHICNSHS*PFHANG
Trigger: GCCATTGGCATGAAATGGCCAACTGTGGCTGTTACA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATAAAATTCTTGTCCTCTaGGCTGCTCCAGCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNKILVL*AAPACL
Trigger: CAAACAAGCTGGAGCAGCCCAGAGGACAAGAATTTT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495891.1
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAAAGTCTTCAATGGAGTaGTCTTCTCAGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIKSSME*SSQRVS
Trigger: TGAGACTCTCTGAGAAGATCACTCCATTGAAGACTT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACACTCTGCCACTTTTaGGTAGTTGTCCTTTTGATC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSTLCHF*VVVLLI
Trigger: GATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCTTTCCAAGTGCTCCTaGGAATCATTGAATACACTC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNLSKCS*ESLNTL
Trigger: GAGTGTATTCAATGATTCTCAGGAGCACTTGGAAAG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCTTTCCAAGTGCTCCTaGGAATCATTGAATACACTC +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSLSKCS*ESLNTL
Trigger: GAGTGTATTCAATGATTCTCAGGAGCACTTGGAAAG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR TCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCTTCAATCAATCGAATaGCAGACTCGGGATACTCTC +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHILQSIE*QTRDTL
Trigger: GAGAGTATCCCGAGTCTGTCATTCGATTGATTGAAG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCTCTCTCCTGAAGAATaGATTGTGGAGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHILSPEE*IVEDVV
Trigger: CACTACATCCTCCACAATTCATTCTTCAGGAGAGAG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAACTATACCAAAGCAGTaGTGCTTTGGACAGGGAATA +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQITIPKQ*CFGQGI
Trigger: TATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACTATACCAAAGCAGTaGTGCTTTGGACAGGGAATA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSTIPKQ*CFGQGI
Trigger: TATTCCCTGTCCAAAGCATCACTGCTTTGGTATAGT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTGCCATAAATACAAGTaGCTTGCAGAAAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNCHKYK*LAESPC
Trigger: GCATGGACTTTCTGCAAGGCACTTGTATTTATGGCA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACATGGCATTCAAATCTaGCCAAAATTCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIHGIQI*PKFLSS
Trigger: GGAGGACAAGAATTTTGGGCAGATTTGAATGCCATG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCATGGCATTCAAATCTaGCCAAAATTCTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNHGIQI*PKFLSS
Trigger: GGAGGACAAGAATTTTGGGCAGATTTGAATGCCATG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTTTAACCAAATTAGCTaGCCAACTCCTTCAAATTGG +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTFNQIS*PTPSNW
Trigger: CCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAGGAGTTTACCTAGTTaGTACCTCTCTGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIRSLPS*YLSELR
Trigger: CCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGAAGACGAAGACTTGTaGGCTCTCAAAGTTAATGTG +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSEDEDL*ALKVNV
Trigger: CACATTAACTTTGAGAGCGCACAAGTCTTCGTCTTC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNSISIM*ISSNCS
Trigger: GGAGCAGTTGGAGCTAATCCACATTATGGAAATGGA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTTCTCATCTGTACTCTaGTTCCTAGATCTAAAAACC +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTFSSVL*FLDLKT
Trigger: GGTTTTTAGATCTAGGAACCAGAGTACAGATGAGAA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTATGGCAAGACAGTGTaGTGCTTCAAACAATCCCTG +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIYGKTV*CFKQSL
Trigger: CAGGGATTGTTTGAAGCACCACACTGTCTTGCCATA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTCAGACCCCGAGAGTTaGCTTCTTCAATCAATCGAA +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHISDPES*LLQSIE
Trigger: TTCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCAAAGAAACTGGTTTTaGACTCTCAATATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLQRNWF*TLNICK
Trigger: TTTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGCTTCAAACAATCCCTaGCATAAATACAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNASNNP*HKYKCL
Trigger: AAGGCACTTGTATTTATGGCAGGGATTGTTTGAAGC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGCTTCAAACAATCCCTaGCATAAATACAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIASNNP*HKYKCL
Trigger: AAGGCACTTGTATTTATGGCAGGGATTGTTTGAAGC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGGTCAAAGTTGTGTTTaGAGATTCCATCTACCACAT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNGQSCV*RFHLPH
Trigger: ATGTGGTAGATGGAATCTGCAAACACAACTTTGACC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGGTCAAAGTTGTGTTTaGAGATTCCATCTACCACAT +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSGQSCV*RFHLPH
Trigger: ATGTGGTAGATGGAATCTGCAAACACAACTTTGACC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGAAAACCTGCTACAAATaGTGGATTGAGTTCATATCA +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTKTCYK*WIEFIS
Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCCATTCAAAACCTaGTACAAATGCTGGATTGAG +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIHPFKT*YKCWIE
Trigger: CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTATAGAATCCTCACATTaGTCACAGCCTCCATTCCAT +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIIESSH*SQPPFH
Trigger: ATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTAT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATCAGAGAGTCTCATTTaGCATGAAAAGTCATCAGGA +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQISESLI*HEKSSG
Trigger: TCCTGATGACTTTTCATGCCAAATGAGACTCTCTGA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTACTCAGCTTATCACTaGTGTCCAGAATGTATTGGA +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNYSAYH*CPECIG
Trigger: TCCAATACATTCTGGACACCAGTGATAAGCTGAGTA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGACAGCCTTCGTAGTTaGTCAAATTCAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNDSLRS*SNSVVS
Trigger: TGAAACAACTGAATTTGACCAACTACGAAGGCTGTC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGATGAAGTCCTGAGATaGATGCATATAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSDEVLR*MHINPS
Trigger: ACTTGGGTTTATATGCATCCATCTCAGGACTTCATC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGATGAAGTCCTGAGATaGATGCATATAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIDEVLR*MHINPS
Trigger: ACTTGGGTTTATATGCATCCATCTCAGGACTTCATC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATGATGAAGTCCTGAGATaGATGCATATAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNDEVLR*MHINPS
Trigger: ACTTGGGTTTATATGCATCCATCTCAGGACTTCATC...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGACCTGCTACAAATGCTaGATTGAGTTCATATCAAAT +
Preference number: 4 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTTCYKC*IEFISN
Trigger: ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATCCTGGGATGTTCCATaGAATAAATGTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQISWDVP*NKCLSF
Trigger: AAATGAGAGACATTTATTTCATGGAACATCCCAGGA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR TCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAACAGACTGATTCACTaGGACATCAGTACAGATACA +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHINRLIH*DISTDT
Trigger: TGTATCTGTACTGATGTCTCAGTGAATCAGTCTGTT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCTTGCAGAAAGTCCATaGAAATTTCAATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNLAESP*KFQFRS
Trigger: AGAACGGAATTGAAATTTGCATGGACTTTCTGCAAG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACTTGCAGAAAGTCCATaGAAATTTCAATTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQILAESP*KFQFRS
Trigger: AGAACGGAATTGAAATTTGCATGGACTTTCTGCAAG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTTTAACCAAATTAGCTaGCCAACTCCTTCAAATTGG +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNFNQIS*PTPSNW
Trigger: CCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGGAAGCCCTGATAAGTaGTTAATAAACAGACTGATT +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSGSPDK*LINRLI
Trigger: AATCAGTCTGTTTATTAAGCACTTATCAGGGCTTCC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCATGGCATTCAAATCTaGCCAAAATTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIHGIQI*PKFLSS
Trigger: AGAGGACAAGAATTTTGGGCAGATTTGAATGCCATG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495891.1
CDS-3UTR CCA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATAAAACAAGTCTTCAATaGAGTGATCTTCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNKTSLQ*SDLLRE
Trigger: CTCTCTGAGAAGATCACTCCATTGAAGACTTGTTTT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTAAAACAAGTCTTCAATaGAGTGATCTTCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSKTSLQ*SDLLRE
Trigger: CTCTCTGAGAAGATCACTCCATTGAAGACTTGTTTT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR GCA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTAAAACCTGCTACAAATaGTGGATTGAGTTCATATCA +
Preference number: 4 (lower is better)
Translates to: INRILTLLTASIPFGQTSKTCYK*WIEFIS
Trigger: TGATATGAACTCAATCCAGCATTTGTAGCAGGTTTT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR GCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTTTAACCAAATTAGCTaGCCAACTCCTTCAAATTGG +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIFNQIS*PTPSNW
Trigger: CCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAACCTGCTACAAATGCTaGATTGAGTTCATATCAAAT +
Preference number: 4 (lower is better)
Translates to: SPTHSKPATNAGLSSYQITCYKC*IEFISN
Trigger: ATTTGATATGAACTCAATCCAGCATTTGTAGCAGGT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CCA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCAAAGAAACTGGTTTTaGACTCTCAATATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIQRNWF*TLNICK
Trigger: TTTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 90 bp CGCGACACCCCGGCGCCGAGCCCGGGTCCGAGTGACGCCTCCTGTTaGCCGCGGCGGTTTGCTCAGCTCCTGGTCCCGGGCCGCGCCAAC +
Preference number: 5 (lower is better)
Translates to: RDTPAPSPGPSDASC*PRRFAQLLVPGRAN
Trigger: GTTGGCGCGGCCCGGGACCAGGAGCTGAGCAAACCGCCGCGGCCAACAGGAGGCGTCACTCGGACCCGGGCTCGGCGCCGGGGTGTCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS CCA 90 bp GTCCGAGTGACGCCTCCTGTTGGCCGCGGCGGTTTGCTCAGCTCCTaGTCCCGGGCCGCGCCAACTCCGCGCAGTGCAGCTGAGGCGCCG +
Preference number: 5 (lower is better)
Translates to: VRVTPPVGRGGLLSS*SRAAPTPRSAAEAP
Trigger: CGGCGCCTCAGCTGCACTGCGCGGAGTTGGCGCGGCCCGGGACCAGGAGCTGAGCAAACCGCCGCGGCCAACAGGAGGCGTCACTCGGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS CCA 90 bp AAAATCCTGAACGGGAGCCTGAGAGAACGGACGACAGGAGCCGAGTaGAAAGCAGTGCCCGCGCCGGAGATCAGCGCCGAGGGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: KILNGSLRERTTGAE*KAVPAPEISAEGGS
Trigger: GCTCCCGCCCTCGGCGCTGATCTCCGGCGCGGGCACTGCTTTCCACTCGGCTCCTGTCGTCCGTTCTCTCAGGCTCCCGTTCAGGATTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295924.12
CDS TCA 90 bp CTGGTGACACTGCCAGGATTGACTGGCGGGGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTGCCCGTCAGCACTTTGGCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: LVTLPGLTGGGLLMP*LPIVYLPVSTLARN
Trigger: GTTTCTGGCCAAAGTGCTGACGGGCAGATACACAATGGGCAGTCATGGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGTGTCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 90 bp GCGGCGAGCGCTTCCCGCGGCGGCGGGGAGGAAGACGAAGACTTGTaGGCTCTCAAAGTTAATGTGAAAACATCTTCCAAACTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: AASASRGGGEEDEDL*ALKVNVKTSSKLLG
Trigger: GCCCAGAAGTTTGGAAGATGTTTTCACATTAACTTTGAGAGCGCACAAGTCTTCGTCTTCCTCCCCGCCGCCGCGGGAAGCGCTCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS TCA 90 bp GCGGCGGGGAGGAAGACGAAGACTTGTGCGCTCTCAAAGTTAATGTaGAAACATCTTCCAAACTTCTGGGCTGCAGCCCGAAACGCGGGG +
Preference number: 5 (lower is better)
Translates to: AAGRKTKTCALSKLM*KHLPNFWAAARNAG
Trigger: CCCCGCGTTTCGGGCTGCAGCCCAGAAGTTTGGAAGATGTTTTCACATTAACTTTGAGAGCGCACAAGTCTTCGTCTTCCTCCCCGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS CCA 90 bp CACACAAGAGTCATAAAGGTCACTGGTGACACTGCCAGGATTGACTaGCGGGGGCCTTCTCATGCCATGACTGCCCATTGTGTATCTGCC +
Preference number: 5 (lower is better)
Translates to: HTRVIKVTGDTARID*RGPSHAMTAHCVSA
Trigger: GGCAGATACACAATGGGCAGTCATGGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGTGTCACCAGTGACCTTTATGACTCTTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAAGAGGTGGAGGAGCTaGTGTGGGAACCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSKRWRS*CGNPTK
Trigger: CTTGGTGGGGTTCCCACACAAGCTCCTCCACCTCTT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCTGCCCGTCAGCACTTaGGCCAGAAACATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIELPVST*ARNMKW
Trigger: CCACTTCATGTTTCTGGCCAAAGTGCTGACGGGCAG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 90 bp CTTCGGCGCCTCGGTCTGATGTATACACCTGCCACAGGCTCTAAGTaGCTAAGAAGTGTAAACCAATTCCATCTTCATGCTGACGGGACC +
Preference number: 5 (lower is better)
Translates to: LRRLGLMYTPATGSK*LRSVNQFHLHADGT
Trigger: GGTCCCGTCAGCATGAAGATGGAATTGGTTTACACTTCTTAGGCACTTAGAGCCTGTGGCAGGTGTATACATCAGACCGAGGCGCCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCTGCCATGACTGCCCATaGTGTATCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSCHDCP*CICPSA
Trigger: TGCTGACGGGCAGATACACAATGGGCAGTCATGGCA...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGTGACACTGCCAGGATaGACTGGCGGGGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLVTLPG*TGGGLL
Trigger: GAGAAGGCCCCCGCCAGTCAATCCTGGCAGTGTCAC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCAAAGCAGTGATGCTTaGGACAGGGAATACGCATGG +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEQSSDA*DREYAW
Trigger: CCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 90 bp GAAAGCTGTGATCTTGGATTGGAACCACTCGTTCTGGAGCTTCAGTaGAAGGATGGGCTTCCGGTATCTGGTCCCCAACATTTGTCCTAT +
Preference number: 5 (lower is better)
Translates to: ESCDLGLEPLVLELQ*KDGLPVSGPQHLSY
Trigger: ATAGGACAAATGTTGGGGACCAGATACCGGAAGCCCATCCTTCCACTGAAGCTCCAGAACGAGTGGTTCCAATCCAAGATCACAGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAAGAGGTGGAGGAGCTaGTGTGGGAACCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLKRWRS*CGNPTK
Trigger: CTTGGTGGGGTTCCCACACAAGCTCCTCCACCTCTT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGAAGAGTGTTTAATATaGGCCTCAAAGACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEEECLI*ASKTSG
Trigger: CCCTGAGGTCTTTGAGGCCAATATTAAACACTCTTC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCTGGAAAGCTGTGATCTaGGATTGGAACCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSWKAVI*DWNHSF
Trigger: GAACGAGTGGTTCCAATCCAAGATCACAGCTTTCCA...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCAATTCCGTTCTCTaGGTGAGTGTGGTACTGCAA +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEFNSVL*VSVVLQ
Trigger: TTGCAGTACCACACTCACCAAGAGAACGGAATTGAA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGTGACACTGCCAGGATaGACTGGCGGGGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSVTLPG*TGGGLL
Trigger: GAGAAGGCCCCCGCCAGTCAATCCTGGCAGTGTCAC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATAGCGTCCAACGGGTCTaGGGGGCTCGCAGAACTGAG +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNSVQRV*GARRTE
Trigger: CTCAGTTCTGCGAGCCCCCAAGACCCGTTGGACGCT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS TCA 90 bp GTGCCTTGCAGAAAGTCCATGCAAATTTCAATTCCGTTCTCTTGGTaGGTGTGGTACTGCAACTGGTTCACCAGCTCAAACACGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VPCRKSMQISIPFSW*VWYCNWFTSSNTRS
Trigger: TGACCTCGTGTTTGAGCTGGTGAACCAGTTGCAGTACCACACTCACCAAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CCA 90 bp ACTACACAGTCTGGCTCAGGTTCGGTGGTTTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCCTCAGAGTCTAAAAATCCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: TTQSGSGSVVSISIM*ISSNCSSESKNPPE
Trigger: CTCGGGAGGATTTTTAGACTCTGAGGAGCAGTTGGAGCTAATCCACATTATGGAAATGGAAACCACCGAACCTGAGCCAGACTGTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGAAGAGTGTTTAATATaGGCCTCAAAGACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSEECLI*ASKTSG
Trigger: CCCTGAGGTCTTTGAGGCCAATATTAAACACTCTTC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCTCTGGTCCCCAACATTaGTCCTATCAGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSSGPQH*SYQESE
Trigger: TTCTGATTCCTGATAGGACAAATGTTGGGGACCAGA...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGAGTAGCTTGCCTTCTTaGCAAAATAACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIESSLPS*QNNCLV
Trigger: GACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACT...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCTGCCCGTCAGCACTTaGGCCAGAAACATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTLPVST*ARNMKW
Trigger: CCACTTCATGTTTCTGGCCAAAGTGCTGACGGGCAG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTGCCATGACTGCCCATaGTGTATCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTCHDCP*CICPSA
Trigger: TGCTGACGGGCAGATACACAATGGGCAGTCATGGCA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTGTGACACTGCCAGGATaGACTGGCGGGGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIVTLPG*TGGGLL
Trigger: GAGAAGGCCCCCGCCAGTCAATCCTGGCAGTGTCAC...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAATAGAATCCTCACATaGCTCACAGCCTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSNRILT*LTASIP
Trigger: TGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCATTACCAGGAGAGCTaGGTAACTGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEHYQES*VTERIP
Trigger: TGGAATTCTTTCAGTTACCAAGCTCTCCTGGTAATG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS TCA 90 bp ACCAGCTCAAACACGAGGTCAAGGGAAGCCTCTTCACTTTTGTCCTaGAAGAGCTCAGTACTCAGCTTATCACTGGTGTCCAGAATGTAT +
Preference number: 5 (lower is better)
Translates to: TSSNTRSREASSLLS*KSSVLSLSLVSRMY
Trigger: ATACATTCTGGACACCAGTGATAAGCTGAGTACTGAGCTCTTTCAGGACAAAAGTGAAGAGGCTTCCCTTGACCTCGTGTTTGAGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CCA 90 bp ACTACACAGTCTGGCTCAGGTTCGGTGGTTTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCCTCAGAGTCTAAAAATCCTGAACGG +
Preference number: 5 (lower is better)
Translates to: TTQSGSGSVVSISIM*ISSNCSSESKNPER
Trigger: CCGTTCAGGATTTTTAGACTCTGAGGAGCAGTTGGAGCTAATCCACATTATGGAAATGGAAACCACCGAACCTGAGCCAGACTGTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295924.12
CDS CCA 90 bp ACTACACAGTCTGGCTCAGGTTCGGTGGTTTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCCTCAGAGTCTAAAAATCCTCGTGAC +
Preference number: 5 (lower is better)
Translates to: TTQSGSGSVVSISIM*ISSNCSSESKNPRD
Trigger: GTCACGAGGATTTTTAGACTCTGAGGAGCAGTTGGAGCTAATCCACATTATGGAAATGGAAACCACCGAACCTGAGCCAGACTGTGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAGCTGTGATCTTGGATaGGAACCACTCGTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLSCDLG*EPLVLE
Trigger: CTCCAGAACGAGTGGTTCCAATCCAAGATCACAGCT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTACACTCTGCCACTTTaGAGTAGTTGTCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEYTLPL*SSCPFD
Trigger: ATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGTA...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTTCAGACCCCGAGAGTaGGCTTCTTCAATCAATCGA +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDFRPRE*ASSINR
Trigger: TCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGAA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAAAGAGGTGGAGGAGCTaGTGTGGGAACCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIKRWRS*CGNPTK
Trigger: CTTGGTGGGGTTCCCACACAAGCTCCTCCACCTCTT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGCCAAAGAAACTGGTTTaGGACTCTCAATATCTGCAA +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEPKKLV*DSQYLQ
Trigger: TTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTGG...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGGTGTCCAGAATGTATaGGATTGTAAAACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEGVQNV*DCKTVF
Trigger: GAAAACAGTTTTACAATCCAATACATTCTGGACACC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTTCAATTCCGTTCTCTaGGTGAGTGTGGTACTGCAA +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDFNSVL*VSVVLQ
Trigger: TTGCAGTACCACACTCACCAAGAGAACGGAATTGAA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTTTGTGATGATGAAGTaGCTTCAAGAGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDFVMMK*LQEVEE
Trigger: CTCCTCCACCTCTTGAAGCAACTTCATCATCACAAA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATACTCGAGGGTCAAAGTaGTGTTTGCAGATTCCATCT +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDTRGSK*CLQIPS
Trigger: AGATGGAATCTGCAAACACAACTTTGACCCTCGAGT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCTGCAAAATAACTGCCTaGTCCAAACATTGTAGCATG +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSCKITA*SKHCSM
Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTTGCA...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACTGCCCGTCAGCACTTaGGCCAGAAACATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQILPVST*ARNMKW
Trigger: CCACTTCATGTTTCTGGCCAAAGTGCTGACGGGCAG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTGCCATGACTGCCCATaGTGTATCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNCHDCP*CICPSA
Trigger: TGCTGACGGGCAGATACACAATGGGCAGTCATGGCA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCAGCCTCCATTCCATTaGGTCAAACTTCTACCAGGC +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTQPPFH*VKLLPG
Trigger: GCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCAAAGCAGTGATGCTTaGGACAGGGAATACGCATGG +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTQSSDA*DREYAW
Trigger: CCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCATATTCACCAAACGTaGTGCTCCAGCTGGACCACT +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTHIHQT*CSSWTT
Trigger: AGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGTTCCCCACCCAGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGGTAAGGTGTCTTAACTaGAAAAAGATTAGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LFPTQSHPFKTCYKCWIEVRCLN*KKIRSH
Trigger: GTGACTCCTAATCTTTTTCAAGTTAAGACACCTTAC...CTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACTGGGTGGGGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 90 bp ACTACACAGTCTGGCTCAGGTTCGGTGGTTTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCCTCAGAGTCTAAAAATCTGAGATTG +
Preference number: 5 (lower is better)
Translates to: TTQSGSGSVVSISIM*ISSNCSSESKNLRL
Trigger: CAATCTCAGATTTTTAGACTCTGAGGAGCAGTTGGAGCTAATCCACATTATGGAAATGGAAACCACCGAACCTGAGCCAGACTGTGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481853.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCGAAGAGTGTTTAATATaGGCCTCAAAGACCTCAGGG +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLEECLI*ASKTSG
Trigger: CCCTGAGGTCTTTGAGGCCAATATTAAACACTCTTC...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTCTGGTCCCCAACATTaGTCCTATCAGGAATCAGAA +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLSGPQH*SYQESE
Trigger: TTCTGATTCCTGATAGGACAAATGTTGGGGACCAGA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGGTGTCCAGAATGTATaGGATTGTAAAACTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSGVQNV*DCKTVF
Trigger: GAAAACAGTTTTACAATCCAATACATTCTGGACACC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGTTCAGACCCCGAGAGTaGGCTTCTTCAATCAATCGA +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTFRPRE*ASSINR
Trigger: TCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGAA...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCACTCGAGGGTCAAAGTaGTGTTTGCAGATTCCATCT +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLTRGSK*CLQIPS
Trigger: AGATGGAATCTGCAAACACAACTTTGACCCTCGAGT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCAGTTATGAGAGTAGCTaGCCTTCTTTGCAAAATAAC +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSSYESS*PSLQNN
Trigger: GTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACT...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTGCCATGACTGCCCATaGTGTATCTGCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHICHDCP*CICPSA
Trigger: TGCTGACGGGCAGATACACAATGGGCAGTCATGGCA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCCAGTACAGATACATCTaGCTTAAACAACACAGAAGT +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSQYRYI*LKQHRS
Trigger: ACTTCTGTGTTGTTTAAGCAAGATGTATCTGTACTG...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTACCAGGCCCAAGCGTAAGGTGTCTTAACTaGAAAAAGATTAGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: SHCSQPPFHLVKLLPGPSVRCLN*KKIRSH
Trigger: GTGACTCCTAATCTTTTTCAAGTTAAGACACCTTAC...GCTTGGGCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATATCTGCCCAAAATTCTaGTCCTCTGGGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNICPKF*SSGLLQ
Trigger: CTGGAGCAGCCCAGAGGACAAGAATTTTGGGCAGAT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495891.1
CDS GCA 90 bp GCAAGACAGTGTGGTGCTTCAAACAATCCCTGCCATAAATACAAGTaGCTTGCAGAAAGTCCATGCAAATTTCAATTCCGTTCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: ARQCGASNNPCHKYK*LAESPCKFQFRSLG
Trigger: ACCAAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCACTTGTATTTATGGCAGGGATTGTTTGAAGCACCACACTGTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CCA 90 bp ACTACACAGTCTGGCTCAGGTTCGGTGGTTTCCATTTCCATAATGTaGATTAGCTCCAACTGCTCCTCAGAGTCTAAAAATCCATATTAC +
Preference number: 5 (lower is better)
Translates to: TTQSGSGSVVSISIM*ISSNCSSESKNPYY
Trigger: GTAATATGGATTTTTAGACTCTGAGGAGCAGTTGGAGCTAATCCACATTATGGAAATGGAAACCACCGAACCTGAGCCAGACTGTGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486483.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGACTCGAGGGTCAAAGTaGTGTTTGCAGATTCCATCT +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTTRGSK*CLQIPS
Trigger: AGATGGAATCTGCAAACACAACTTTGACCCTCGAGT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATTGCAAAATAACTGCCTaGTCCAAACATTGTAGCATG +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDCKITA*SKHCSM
Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTTGCA...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCAGTAGCTTGCCTTCTTaGCAAAATAACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLSSLPS*QNNCLV
Trigger: GACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACT...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCAGCCTCCATTCCATTaGGTCAAACTTCTACCAGGC +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSQPPFH*VKLLPG
Trigger: GCCTGGTAGAAGTTTGACCAAATGGAATGGAGGCTG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCAAAGCAGTGATGCTTaGGACAGGGAATACGCATGG +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSQSSDA*DREYAW
Trigger: CCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCAAAGCAGTGATGCTTaGGACAGGGAATACGCATGG +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNQSSDA*DREYAW
Trigger: CCATGCGTATTCCCTGTCCAAAGCATCACTGCTTTG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCATATTCACCAAACGTaGTGCTCCAGCTGGACCACT +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSHIHQT*CSSWTT
Trigger: AGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCATATTCACCAAACGTaGTGCTCCAGCTGGACCACT +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNHIHQT*CSSWTT
Trigger: AGTGGTCCAGCTGGAGCACAACGTTTGGTGAATATG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCATTACCAGGAGAGCTaGGTAACTGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLHYQES*VTERIP
Trigger: TGGAATTCTTTCAGTTACCAAGCTCTCCTGGTAATG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGAGGAAGACGAAGACTaGTGCGCTCTCAAAGTTAAT +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTEEDED*CALKVN
Trigger: ATTAACTTTGAGAGCGCACAAGTCTTCGTCTTCCTC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS GCA 90 bp TCAAACAATCCCTGCCATAAATACAAGTGCCTTGCAGAAAGTCCATaGAAATTTCAATTCCGTTCTCTTGGTGAGTGTGGTACTGCAACT +
Preference number: 5 (lower is better)
Translates to: SNNPCHKYKCLAESP*KFQFRSLGECGTAT
Trigger: AGTTGCAGTACCACACTCACCAAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCACTTGTATTTATGGCAGGGATTGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTAGCTGTGATCTTGGATaGGAACCACTCGTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHISCDLG*EPLVLE
Trigger: CTCCAGAACGAGTGGTTCCAATCCAAGATCACAGCT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTGGAAAGCTGTGATCTaGGATTGGAACCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSWKAVI*DWNHSF
Trigger: GAACGAGTGGTTCCAATCCAAGATCACAGCTTTCCA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTGGAAAGCTGTGATCTaGGATTGGAACCACTCGTTC +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNWKAVI*DWNHSF
Trigger: GAACGAGTGGTTCCAATCCAAGATCACAGCTTTCCA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTACACTCTGCCACTTTaGAGTAGTTGTCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLYTLPL*SSCPFD
Trigger: ATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGTA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATTCAGACCCCGAGAGTaGGCTTCTTCAATCAATCGA +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIFRPRE*ASSINR
Trigger: TCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGAA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCTGCAAAATAACTGCCTaGTCCAAACATTGTAGCATG +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLCKITA*SKHCSM
Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTTGCA...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATAGTTATGAGAGTAGCTaGCCTTCTTTGCAAAATAAC +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDSYESS*PSLQNN
Trigger: GTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACT...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AACTGTAACAGCCACAGTTGGCCATTTCATGCCAATGGCAGCAAACAACAGGATGTAAGGTGTCTTAACTaGAAAAAGATTAGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: NCNSHSWPFHANGSKQQDVRCLN*KKIRSH
Trigger: GTGACTCCTAATCTTTTTCAAGTTAAGACACCTTAC...ATCCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 90 bp GTGGACTCCTTTGGAGGACTTCTTAGAAAAGTTATGAGAGTAGCTTaGCTTCTTTGCAAAATAACTGCCTTGTCCAAACATTGTAGCATG +
Preference number: 5 (lower is better)
Translates to: VDSFGGLLRKVMRVA*LLCKITALSKHCSM
Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACTTTTCTAAGAAGTCCTCCAAAGGAGTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 90 bp GCTTTCTTCATCATAGGTTCATGTAAGCTGTTCTCATCTGTACTCTaGTTCCTAGATCTAAAAACCCCATCAAGTGAGCCAGATTCTAGA +
Preference number: 5 (lower is better)
Translates to: AFFIIGSCKLFSSVL*FLDLKTPSSEPDSR
Trigger: TCTAGAATCTGGCTCACTTGATGGGGTTTTTAGATCTAGGAACCAGAGTACAGATGAGAACAGCTTACATGAACCTATGATGAAGAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATTTCAATTCCGTTCTCTaGGTGAGTGTGGTACTGCAA +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNFNSVL*VSVVLQ
Trigger: TTGCAGTACCACACTCACCAAGAGAACGGAATTGAA...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGATCTGCCCAAAATTCTaGTCCTCCATACTTCATTCT +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTICPKF*SSILHS
Trigger: AGAATGAAGTATGGAGGACAAGAATTTTGGGCAGAT...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGGTTGGTCAAATTCAGTaGTTTCATACACGTTCATGG +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTVGQIQ*FHTRSW
Trigger: CCATGAACGTGTATGAAACAACTGAATTTGACCAAC...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTTTCAGACCCCGAGAGTaGGCTTCTTCAATCAATCGA +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIFRPRE*ASSINR
Trigger: TCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGAA...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATATTTGTGATGATGAAGTaGCTTCAAGAGGTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIFVMMK*LQEVEE
Trigger: CTCCTCCACCTCTTGAAGCAACTTCATCATCACAAA...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCACCAAACGCCAAAGAAACTGGTTTaGGACTCTCAATATCTGCAA +
Preference number: 5 (lower is better)
Translates to: SLPSCYLSELRKQHIHQTPKKLV*DSQYLQ
Trigger: TTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTGG...CGTTTGGTGAATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAACTCGAGGGTCAAAGTaGTGTTTGCAGATTCCATCT +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQITRGSK*CLQIPS
Trigger: AGATGGAATCTGCAAACACAACTTTGACCCTCGAGT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATAATAGAATCCTCACATaGCTCACAGCCTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNNRILT*LTASIP
Trigger: TGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTCAGTCACAAGCTAGGTCTGGAACCCGAAAAGGAAGTAATACTTCTAACCCTCCAGTACAGATACATCTaGCTTAAACAACACAGAAGT +
Preference number: 5 (lower is better)
Translates to: FSHKLGLEPEKEVILLTLQYRYI*LKQHRS
Trigger: ACTTCTGTGTTGTTTAAGCAAGATGTATCTGTACTG...GAGGGTTAGAAGTATTACTTCCTTTTCGGGTTCCAGACCTAGCTTGTGACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 90 bp ACAGCCTTCGTAGTTGGTCAAATTCAGTTGTTTCATACACGTTCATaGCATTCAAATCTGCCCAAAATTCTTGTCCTCCATACTTCATTC +
Preference number: 5 (lower is better)
Translates to: TAFVVGQIQLFHTRS*HSNLPKILVLHTSF
Trigger: GAATGAAGTATGGAGGACAAGAATTTTGGGCAGATTTGAATGCCATGAACGTGTATGAAACAACTGAATTTGACCAACTACGAAGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTAGTAGCTTGCCTTCTTaGCAAAATAACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSSSLPS*QNNCLV
Trigger: GACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAATGAAGTGGACTCCTTaGGAGGACTTCTTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIMKWTP*EDFLEK
Trigger: CTTTTCTAAGAAGTCCTCCAAAGGAGTCCACTTCAT...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTATGAAGTGGACTCCTTaGGAGGACTTCTTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSMKWTP*EDFLEK
Trigger: CTTTTCTAAGAAGTCCTCCAAAGGAGTCCACTTCAT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATCATTACCAGGAGAGCTaGGTAACTGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNHYQES*VTERIP
Trigger: TGGAATTCTTTCAGTTACCAAGCTCTCCTGGTAATG...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 90 bp TTTGGAGGACTTCTTAGAAAAGTTATGAGAGTAGCTTGCCTTCTTTaGAAAATAACTGCCTTGTCCAAACATTGTAGCATGCTTTCCACA +
Preference number: 5 (lower is better)
Translates to: FGGLLRKVMRVACLL*KITALSKHCSMLST
Trigger: TGTGGAAAGCATGCTACAATGTTTGGACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACTTTTCTAAGAAGTCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTACACTCTGCCACTTTaGAGTAGTTGTCCTTTTGAT +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSYTLPL*SSCPFD
Trigger: ATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGTA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTATCTGCCCAAAATTCTaGTCCTCCATACTTCATTCT +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSICPKF*SSILHS
Trigger: AGAATGAAGTATGGAGGACAAGAATTTTGGGCAGAT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp CTGCCTTTAACCAAATTAGCTGCCCAACTCCTTCAAATTGGAATGGATGATAATATCTGCCCAAAATTCTaGTCCTCCATACTTCATTCT +
Preference number: 5 (lower is better)
Translates to: LPLTKLAAQLLQIGMDDNICPKF*SSILHS
Trigger: AGAATGAAGTATGGAGGACAAGAATTTTGGGCAGAT...ATTATCATCCATTCCAATTTGAAGGAGTTGGGCAGCTAATTTGGTTAAAGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTGTTGGTCAAATTCAGTaGTTTCATACACGTTCATGG +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSVGQIQ*FHTRSW
Trigger: CCATGAACGTGTATGAAACAACTGAATTTGACCAAC...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTCCAAAGAAACTGGTTTaGGACTCTCAATATCTGCAA +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSPKKLV*DSQYLQ
Trigger: TTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTGG...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATACCAAAGAAACTGGTTTaGGACTCTCAATATCTGCAA +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIPKKLV*DSQYLQ
Trigger: TTGCAGATATTGAGAGTCCAAAACCAGTTTCTTTGG...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTTGCAAAATAACTGCCTaGTCCAAACATTGTAGCATG +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSCKITA*SKHCSM
Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTTGCA...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTATGAAGTGGACTCCTTaGGAGGACTTCTTAGAAAAG +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIMKWTP*EDFLEK
Trigger: CTTTTCTAAGAAGTCCTCCAAAGGAGTCCACTTCAT...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCATTACCAGGAGAGCTaGGTAACTGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIHYQES*VTERIP
Trigger: TGGAATTCTTTCAGTTACCAAGCTCTCCTGGTAATG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTGTTGGTCAAATTCAGTaGTTTCATACACGTTCATGG +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIVGQIQ*FHTRSW
Trigger: CCATGAACGTGTATGAAACAACTGAATTTGACCAAC...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp ATAAATAGAATCCTCACATTGCTCACAGCCTCCATTCCATTTGGTCAAACTTCTAGTTATGAGAGTAGCTaGCCTTCTTTGCAAAATAAC +
Preference number: 5 (lower is better)
Translates to: INRILTLLTASIPFGQTSSYESS*PSLQNN
Trigger: GTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACT...AGAAGTTTGACCAAATGGAATGGAGGCTGTGAGCAATGTGAGGATTCTATTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp AGTCCCACCCATTCAAAACCTGCTACAAATGCTGGATTGAGTTCATATCAAATAGTAAGGTGTCTTAACTaGAAAAAGATTAGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: SPTHSKPATNAGLSSYQIVRCLN*KKIRSH
Trigger: GTGACTCCTAATCTTTTTCAAGTTAAGACACCTTAC...TATTTGATATGAACTCAATCCAGCATTTGTAGCAGGTTTTGAATGGGTGGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 90 bp AGTCTTATGAAAAAGATTGTAAATGATCCGATAACTTTTATCCTCTaGAGAAACAGGGACTTGGATGAAGTCCTGAGATGGATGCATATA +
Preference number: 5 (lower is better)
Translates to: SLMKKIVNDPITFIL*RNRDLDEVLRWMHI
Trigger: TATATGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTTCTGCAGAGGATAAAAGTTATCGGATCATTTACAATCTTTTTCATAAGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS-3UTR CAA 90 bp TTTATAAGGAGTTTACCTAGTTGCTACCTCTCTGAACTGAGGAAACAGCATATTCAGTACAGATACATCTaGCTTAAACAACACAGAAGT +
Preference number: 5 (lower is better)
Translates to: FIRSLPSCYLSELRKQHIQYRYI*LKQHRS
Trigger: ACTTCTGTGTTGTTTAAGCAAGATGTATCTGTACTG...AATATGCTGTTTCCTCAGTTCAGAGAGGTAGCAACTAGGTAAACTCCTTATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 72 bp CCGGCGCCGAGCCCGGGTCCGAGTGACGCCTCCTGTTaGCCGCGGCGGTTTGCTCAGCTCCTGGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: PAPSPGPSDASC*PRRFAQLLVPG
Trigger: GCCCGGGACCAGGAGCTGAGCAAACCGCCGCGGCCAACAGGAGGCGTCACTCGGACCCGGGCTCGGCGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS CAA 90 bp CGCCGAGCCCGGGTCCGAGTGACGCCTCCTGTTGGCCGCGGCGGTTaGCTCAGCTCCTGGTCCCGGGCCGCGCCAACTCCGCGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: RRARVRVTPPVGRGG*LSSWSRAAPTPRSA
Trigger: TGCACTGCGCGGAGTTGGCGCGGCCCGGGACCAGGAGCTGAGCAAACCGCCGCGGCCAACAGGAGGCGTCACTCGGACCCGGGCTCGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS CAA 72 bp CGGGTCCGAGTGACGCCTCCTGTTGGCCGCGGCGGTTaGCTCAGCTCCTGGTCCCGGGCCGCGCCAACTCCG +
Preference number: 6 (lower is better)
Translates to: RVRVTPPVGRGG*LSSWSRAAPTP
Trigger: CGGAGTTGGCGCGGCCCGGGACCAGGAGCTGAGCAAACCGCCGCGGCCAACAGGAGGCGTCACTCGGACCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS CCA 72 bp ACGCCTCCTGTTGGCCGCGGCGGTTTGCTCAGCTCCTaGTCCCGGGCCGCGCCAACTCCGCGCAGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: TPPVGRGGLLSS*SRAAPTPRSAA
Trigger: AGCTGCACTGCGCGGAGTTGGCGCGGCCCGGGACCAGGAGCTGAGCAAACCGCCGCGGCCAACAGGAGGCGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473702.5
CDS TCA 72 bp GAGGAGCGTCCAACGGGTCTTGGGGGCTCGCAGAACTaGGCCGCGAAGCGCGGGGGAAAGGCGGCGAGCGCT +
Preference number: 6 (lower is better)
Translates to: EERPTGLGGSQN*AAKRGGKAASA
Trigger: AGCGCTCGCCGCCTTTCCCCCGCGCTTCGCGGCTCAGTTCTGCGAGCCCCCAAGACCCGTTGGACGCTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS CCA 72 bp AACGGGAGCCTGAGAGAACGGACGACAGGAGCCGAGTaGAAAGCAGTGCCCGCGCCGGAGATCAGCGCCGAG +
Preference number: 6 (lower is better)
Translates to: NGSLRERTTGAE*KAVPAPEISAE
Trigger: CTCGGCGCTGATCTCCGGCGCGGGCACTGCTTTCCACTCGGCTCCTGTCGTCCGTTCTCTCAGGCTCCCGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295924.12
CDS CAA 72 bp AGTCTAAAAATCCTCCCGAGGAGCGTCCAACGGGTCTaGGGGGCTCGCAGAACTGAGCCGCGAAGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: SLKILPRSVQRV*GARRTEPRSAG
Trigger: CCCCGCGCTTCGCGGCTCAGTTCTGCGAGCCCCCAAGACCCGTTGGACGCTCCTCGGGAGGATTTTTAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS TCA 72 bp CTGCCAGGATTGACTGGCGGGGGCCTTCTCATGCCATaGCTGCCCATTGTGTATCTGCCCGTCAGCACTTTG +
Preference number: 6 (lower is better)
Translates to: LPGLTGGGLLMP*LPIVYLPVSTL
Trigger: CAAAGTGCTGACGGGCAGATACACAATGGGCAGTCATGGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 90 bp AAGGCGGCGAGCGCTTCCCGCGGCGGCGGGGAGGAAGACGAAGACTaGTGCGCTCTCAAAGTTAATGTGAAAACATCTTCCAAACTTCTG +
Preference number: 6 (lower is better)
Translates to: KAASASRGGGEEDED*CALKVNVKTSSKLL
Trigger: CAGAAGTTTGGAAGATGTTTTCACATTAACTTTGAGAGCGCACAAGTCTTCGTCTTCCTCCCCGCCGCCGCGGGAAGCGCTCGCCGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS CCA 72 bp GTCATAAAGGTCACTGGTGACACTGCCAGGATTGACTaGCGGGGGCCTTCTCATGCCATGACTGCCCATTGT +
Preference number: 6 (lower is better)
Translates to: VIKVTGDTARID*RGPSHAMTAHC
Trigger: ACAATGGGCAGTCATGGCATGAGAAGGCCCCCGCCAGTCAATCCTGGCAGTGTCACCAGTGACCTTTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 72 bp AGCGCTTCCCGCGGCGGCGGGGAGGAAGACGAAGACTaGTGCGCTCTCAAAGTTAATGTGAAAACATCTTCC +
Preference number: 6 (lower is better)
Translates to: SASRGGGEEDED*CALKVNVKTSS
Trigger: GGAAGATGTTTTCACATTAACTTTGAGAGCGCACAAGTCTTCGTCTTCCTCCCCGCCGCCGCGGGAAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS GCA 72 bp AAAGTTAATGTGAAAACATCTTCCAAACTTCTGGGCTaGAGCCCGAAACGCGGGGTAGCCGGAAGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: KVNVKTSSKLLG*SPKRGVAGRLP
Trigger: CGGGAGCCTTCCGGCTACCCCGCGTTTCGGGCTGCAGCCCAGAAGTTTGGAAGATGTTTTCACATTAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS TCA 72 bp GCCACCGTCCCACTGAGGGTTTCTGATGGAAAGCTGTaGTCTTGGATTGGAACCACTCGTTCTGGAGCTTCA +
Preference number: 6 (lower is better)
Translates to: ATVPLRVSDGKL*SWIGTTRSGAS
Trigger: TGAAGCTCCAGAACGAGTGGTTCCAATCCAAGATCACAGCTTTCCATCAGAAACCCTCAGTGGGACGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS TCA 72 bp GGAAGTGAGCTGGTGTGGAATCTGCCACCGTCCCACTaGGGGTTTCTGATGGAAAGCTGTGATCTTGGATTG +
Preference number: 6 (lower is better)
Translates to: GSELVWNLPPSH*GFLMESCDLGL
Trigger: CAATCCAAGATCACAGCTTTCCATCAGAAACCCTCAGTGGGACGGTGGCAGATTCCACACCAGCTCACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS GCA 72 bp GCTTCCCGCGGCGGCGGGGAGGAAGACGAAGACTTGTaGGCTCTCAAAGTTAATGTGAAAACATCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: ASRGGGEEDEDL*ALKVNVKTSSK
Trigger: TTTGGAAGATGTTTTCACATTAACTTTGAGAGCGCACAAGTCTTCGTCTTCCTCCCCGCCGCCGCGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS CCA 72 bp GATCTTGGATTGGAACCACTCGTTCTGGAGCTTCAGTaGAAGGATGGGCTTCCGGTATCTGGTCCCCAACAT +
Preference number: 6 (lower is better)
Translates to: DLGLEPLVLELQ*KDGLPVSGPQH
Trigger: ATGTTGGGGACCAGATACCGGAAGCCCATCCTTCCACTGAAGCTCCAGAACGAGTGGTTCCAATCCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CCA 72 bp ATTGGAACCACTCGTTCTGGAGCTTCAGTGGAAGGATaGGCTTCCGGTATCTGGTCCCCAACATTTGTCCTA +
Preference number: 6 (lower is better)
Translates to: IGTTRSGASVEG*ASGIWSPTFVL
Trigger: TAGGACAAATGTTGGGGACCAGATACCGGAAGCCCATCCTTCCACTGAAGCTCCAGAACGAGTGGTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS TCA 72 bp GTGCCTAAGAAGTGTAAACCAATTCCATCTTCATGCTaGCGGGACCCGAGTGAATTCGGTACAAAGGGCAGT +
Preference number: 6 (lower is better)
Translates to: VPKKCKPIPSSC*RDPSEFGTKGS
Trigger: ACTGCCCTTTGTACCGAATTCACTCGGGTCCCGTCAGCATGAAGATGGAATTGGTTTACACTTCTTAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS CAA 72 bp GCATGCTTTCCACAGACTCGAGGGTCAAAGTTGTGTTaGCAGATTCCATCTACCACATCCTGGGATGTTCCA +
Preference number: 6 (lower is better)
Translates to: ACFPQTRGSKLC*QIPSTTSWDVP
Trigger: TGGAACATCCCAGGATGTGGTAGATGGAATCTGCAAACACAACTTTGACCCTCGAGTCTGTGGAAAGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 90 bp GAGCTTCAGTGGAAGGATGGGCTTCCGGTATCTGGTCCCCAACATTaGTCCTATCAGGAATCAGAACAGACATATTATTTTCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: ELQWKDGLPVSGPQH*SYQESEQTYYFLLV
Trigger: CACCAGCAGAAAATAATATGTCTGTTCTGATTCCTGATAGGACAAATGTTGGGGACCAGATACCGGAAGCCCATCCTTCCACTGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CAA 90 bp ACAAGTGCCTTGCAGAAAGTCCATGCAAATTTCAATTCCGTTCTCTaGGTGAGTGTGGTACTGCAACTGGTTCACCAGCTCAAACACGAG +
Preference number: 6 (lower is better)
Translates to: TSALQKVHANFNSVL*VSVVLQLVHQLKHE
Trigger: CTCGTGTTTGAGCTGGTGAACCAGTTGCAGTACCACACTCACCAAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS GCA 72 bp CATGCTTTCCACAGACTCGAGGGTCAAAGTTGTGTTTaGAGATTCCATCTACCACATCCTGGGATGTTCCAT +
Preference number: 6 (lower is better)
Translates to: HAFHRLEGQSCV*RFHLPHPGMFH
Trigger: ATGGAACATCCCAGGATGTGGTAGATGGAATCTGCAAACACAACTTTGACCCTCGAGTCTGTGGAAAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 72 bp ATGATGAAGTTGCTTCAAGAGGTGGAGGAGCTTGTGTaGGAACCCCACCAAGTGTCTGTAAATATGGAAGCA +
Preference number: 6 (lower is better)
Translates to: MMKLLQEVEELV*EPHQVSVNMEA
Trigger: TGCTTCCATATTTACAGACACTTGGTGGGGTTCCCACACAAGCTCCTCCACCTCTTGAAGCAACTTCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 72 bp CTCGGTCTGATGTATACACCTGCCACAGGCTCTAAGTaGCTAAGAAGTGTAAACCAATTCCATCTTCATGCT +
Preference number: 6 (lower is better)
Translates to: LGLMYTPATGSK*LRSVNQFHLHA
Trigger: AGCATGAAGATGGAATTGGTTTACACTTCTTAGGCACTTAGAGCCTGTGGCAGGTGTATACATCAGACCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461166.5
CDS CAA 72 bp GTGGTGTGGACAGCCTTCGTAGTTGGTCAAATTCAGTaGTTTCATACACGTTCATGGCATTCAAATCTGCCC +
Preference number: 6 (lower is better)
Translates to: VVWTAFVVGQIQ*FHTRSWHSNLP
Trigger: GGGCAGATTTGAATGCCATGAACGTGTATGAAACAACTGAATTTGACCAACTACGAAGGCTGTCCACACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 72 bp CACATCATAAATCGAACCTCTTTCAGACCCCGAGAGTaGGCTTCTTCAATCAATCGAATGACAGACTCGGGA +
Preference number: 6 (lower is better)
Translates to: HIINRTSFRPRE*ASSINRMTDSG
Trigger: TCCCGAGTCTGTCATTCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGAAAGAGGTTCGATTTATGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 72 bp ATTGTAGCATGCTTTCCACAGACTCGAGGGTCAAAGTaGTGTTTGCAGATTCCATCTACCACATCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: IVACFPQTRGSK*CLQIPSTTSWD
Trigger: ATCCCAGGATGTGGTAGATGGAATCTGCAAACACAACTTTGACCCTCGAGTCTGTGGAAAGCATGCTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 90 bp TGGTTATTCCACATCATAAATCGAACCTCTTTCAGACCCCGAGAGTaGGCTTCTTCAATCAATCGAATGACAGACTCGGGATACTCTCTC +
Preference number: 6 (lower is better)
Translates to: WLFHIINRTSFRPRE*ASSINRMTDSGYSL
Trigger: GAGAGAGTATCCCGAGTCTGTCATTCGATTGATTGAAGAAGCCAACTCTCGGGGTCTGAAAGAGGTTCGATTTATGATGTGGAATAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 72 bp CCCTGCCATAAATACAAGTGCCTTGCAGAAAGTCCATaGAAATTTCAATTCCGTTCTCTTGGTGAGTGTGGT +
Preference number: 6 (lower is better)
Translates to: PCHKYKCLAESP*KFQFRSLGECG
Trigger: ACCACACTCACCAAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCACTTGTATTTATGGCAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS GCA 72 bp TTCAGTTGTTTCATACACGTTCATGGCATTCAAATCTaGCCAAAATTCTTGTCCTCTGGGCTGCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: FSCFIHVHGIQI*PKFLSSGLLQL
Trigger: AAGCTGGAGCAGCCCAGAGGACAAGAATTTTGGGCAGATTTGAATGCCATGAACGTGTATGAAACAACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495891.1
CDS CAA 72 bp CATCAAGTGAGCCAGATTCTAGAAGAGTGTTTAATATaGGCCTCAAAGACCTCAGGGTTCCAGTTCCCAATC +
Preference number: 6 (lower is better)
Translates to: HQVSQILEECLI*ASKTSGFQFPI
Trigger: GATTGGGAACTGGAACCCTGAGGTCTTTGAGGCCAATATTAAACACTCTTCTAGAATCTGGCTCACTTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CAA 90 bp GACAGTGTGGTGCTTCAAACAATCCCTGCCATAAATACAAGTGCCTaGCAGAAAGTCCATGCAAATTTCAATTCCGTTCTCTTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: DSVVLQTIPAINTSA*QKVHANFNSVLLVS
Trigger: ACTCACCAAGAGAACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCACTTGTATTTATGGCAGGGATTGTTTGAAGCACCACACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CCA 72 bp CTCTGCAGAAACAGGGACTTGGATGAAGTCCTGAGATaGATGCATATAAACCCAAGTTTCAGGGTAAAAGTT +
Preference number: 6 (lower is better)
Translates to: LCRNRDLDEVLR*MHINPSFRVKV
Trigger: AACTTTTACCCTGAAACTTGGGTTTATATGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTTCTGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 72 bp TGGAAGGATGGGCTTCCGGTATCTGGTCCCCAACATTaGTCCTATCAGGAATCAGAACAGACATATTATTTT +
Preference number: 6 (lower is better)
Translates to: WKDGLPVSGPQH*SYQESEQTYYF
Trigger: AAAATAATATGTCTGTTCTGATTCCTGATAGGACAAATGTTGGGGACCAGATACCGGAAGCCCATCCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CAA 72 bp ATGAGAGTAGCTTGCCTTCTTTGCAAAATAACTGCCTaGTCCAAACATTGTAGCATGCTTTCCACAGACTCG +
Preference number: 6 (lower is better)
Translates to: MRVACLLCKITA*SKHCSMLSTDS
Trigger: CGAGTCTGTGGAAAGCATGCTACAATGTTTGGACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 72 bp TGTGGTGCTTCAAACAATCCCTGCCATAAATACAAGTaGCTTGCAGAAAGTCCATGCAAATTTCAATTCCGT +
Preference number: 6 (lower is better)
Translates to: CGASNNPCHKYK*LAESPCKFQFR
Trigger: ACGGAATTGAAATTTGCATGGACTTTCTGCAAGGCACTTGTATTTATGGCAGGGATTGTTTGAAGCACCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CCA 72 bp ATCATAGGTTCATGTAAGCTGTTCTCATCTGTACTCTaGTTCCTAGATCTAAAAACCCCATCAAGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: IIGSCKLFSSVL*FLDLKTPSSEP
Trigger: TGGCTCACTTGATGGGGTTTTTAGATCTAGGAACCAGAGTACAGATGAGAACAGCTTACATGAACCTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CAA 90 bp TCTTTCCAAGTGCTCCTGAGAATCATTGAATACACTCTGCCACTTTaGAGTAGTTGTCCTTTTGATCTGCCAATGATATGGCAAGACAGT +
Preference number: 6 (lower is better)
Translates to: SFQVLLRIIEYTLPL*SSCPFDLPMIWQDS
Trigger: ACTGTCTTGCCATATCATTGGCAGATCAAAAGGACAACTACTCAAAAGTGGCAGAGTGTATTCAATGATTCTCAGGAGCACTTGGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS CAA 90 bp AGAAAAGTTATGAGAGTAGCTTGCCTTCTTTGCAAAATAACTGCCTaGTCCAAACATTGTAGCATGCTTTCCACAGACTCGAGGGTCAAA +
Preference number: 6 (lower is better)
Translates to: RKVMRVACLLCKITA*SKHCSMLSTDSRVK
Trigger: TTTGACCCTCGAGTCTGTGGAAAGCATGCTACAATGTTTGGACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CAA 90 bp ATTGTAAATGATCCGATAACTTTTATCCTCTGCAGAAACAGGGACTaGGATGAAGTCCTGAGATGGATGCATATAAACCCAAGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: IVNDPITFILCRNRD*DEVLRWMHINPSFR
Trigger: CCTGAAACTTGGGTTTATATGCATCCATCTCAGGACTTCATCCAAGTCCCTGTTTCTGCAGAGGATAAAAGTTATCGGATCATTTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS GCA 72 bp AAAAAGATTGTAAATGATCCGATAACTTTTATCCTCTaGAGAAACAGGGACTTGGATGAAGTCCTGAGATGG +
Preference number: 6 (lower is better)
Translates to: KKIVNDPITFIL*RNRDLDEVLRW
Trigger: CCATCTCAGGACTTCATCCAAGTCCCTGTTTCTGCAGAGGATAAAAGTTATCGGATCATTTACAATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5
CDS CCA 72 bp GTAGTTGGTCAAATTCAGTTGTTTCATACACGTTCATaGCATTCAAATCTGCCCAAAATTCTTGTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: VVGQIQLFHTRS*HSNLPKILVLH
Trigger: ATGGAGGACAAGAATTTTGGGCAGATTTGAATGCCATGAACGTGTATGAAACAACTGAATTTGACCAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000473702.5
ENST00000481853.5
ENST00000486483.5
ENST00000542783.5
CDS GCA 72 bp CTTCTTAGAAAAGTTATGAGAGTAGCTTGCCTTCTTTaGAAAATAACTGCCTTGTCCAAACATTGTAGCATG +
Preference number: 6 (lower is better)
Translates to: LLRKVMRVACLL*KITALSKHCSM
Trigger: CATGCTACAATGTTTGGACAAGGCAGTTATTTTGCAAAGAAGGCAAGCTACTCTCATAACTTTTCTAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000295924.12
ENST00000461166.5
ENST00000481853.5
ENST00000486483.5
ENST00000495891.1
ENST00000542783.5