RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TINCR (Homo sapiens)

Ensembl gene IDs: ENSG00000223573

Ensembl transcript IDs: ENST00000448587.5, ENST00000587632.1, ENST00000590789.1, ENST00000646160.1, ENST00000646675.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCCCAGGGGCTGCGCAACGATGACGTGGCTGCAGGTCAGAGGTaGAACGGAGGCCCGGCACACTGCCCTGAGGGTCTCCACCCGGAA +
Preference number: 1 (lower is better)
Translates to: PPQGLRNDDVAAGQR*NGGPAHCPEGLHPE
Trigger: TTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACGTCATCGTTGCGCAGCCCCTGGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 90 bp CGTGGCTGCAGGTCAGAGGTGCAACGGAGGCCCGGCACACTGCCCTaGGGGTCTCCACCCGGAATTCCCACAACGCACTCCCTGCAATGC +
Preference number: 1 (lower is better)
Translates to: RGCRSEVQRRPGTLP*GSPPGIPTTHSLQC
Trigger: GCATTGCAGGGAGTGCGTTGTGGGAATTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp GATGACGTGGCTGCAGGTCAGAGGTGCAACGGAGGCCCGGCACACTaGCCTGAGGGTCTCCACCCGGAATTCCCACAACGCACTCCCTGC +
Preference number: 1 (lower is better)
Translates to: DDVAAGQRCNGGPAH*PEGLHPEFPQRTPC
Trigger: GCAGGGAGTGCGTTGTGGGAATTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACGTCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp GGGACTGGGGCTCCAGCAGGAGTGTCTGAAGCAGTGTGCATCAGCTaGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCCCAGACCCTG +
Preference number: 1 (lower is better)
Translates to: GTGAPAGVSEAVCIS*SGQGFMVHLGAQTL
Trigger: CAGGGTCTGGGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGCCCCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 90 bp ACGCATGAGCAGGGATCTGGGCTGCCTCCCCCTGCTGTGTGTCCCTaGCAACCTCCTTGGGCCTCAGGCTACCCTCTGCAGAACAGACAG +
Preference number: 1 (lower is better)
Translates to: THEQGSGLPPPAVCP*QPPWASGYPLQNRQ
Trigger: CTGTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAGCAGGGGGAGGCAGCCCAGATCCCTGCTCATGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp CTTGGGCCTCAGGCTACCCTCTGCAGAACAGACAGCAGCAGACTCTaGTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTGGGGA +
Preference number: 1 (lower is better)
Translates to: LGPQATLCRTDSSRL*SRRSSRGHTVGLWG
Trigger: TCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCTGCTGCTGTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp AGACTCTGCTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTaGGGACAAAGTCCTGGGTTAGGCACCAAGGGGAGAGGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: RLCSRRSSRGHTVGL*GQSPGLGTKGRGGG
Trigger: CCCTCCACCTCTCCCCTTGGTGCCTAACCCAGGACTTTGTCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 90 bp CTGGCTGCCCATGGGAGCTTTCCAAGGTGGCACAGTGCTTTCCACTaGAGACAGGGCACCCAGGGCCCCAAGAGGGGAGCAACAACCTCA +
Preference number: 1 (lower is better)
Translates to: LAAHGSFPRWHSAFH*RQGTQGPKRGATTS
Trigger: TGAGGTTGTTGCTCCCCTCTTGGGGCCCTGGGTGCCCTGTCTTCAGTGGAAAGCACTGTGCCACCTTGGAAAGCTCCCATGGGCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 90 bp ATACACGCATGTGGCCCAGCTGTTAGCAGAGGCCCAAACCACGCATaGGCAGGGATCTGGGCTGCCTCCCCCTGCTGTGTGTCCCTGACA +
Preference number: 1 (lower is better)
Translates to: IHACGPAVSRGPNHA*AGIWAASPCCVSLT
Trigger: TGTCAGGGACACACAGCAGGGGGAGGCAGCCCAGATCCCTGCTCATGCGTGGTTTGGGCCTCTGCTAACAGCTGGGCCACATGCGTGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp TCCTTGTCAGGGACTGGGGCTCCAGCAGGAGTGTCTGAAGCAGTGTaGATCAGCTGGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCC +
Preference number: 1 (lower is better)
Translates to: SLSGTGAPAGVSEAV*ISWSGQGFMVHLGA
Trigger: GGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGCCCCAGTCCCTGACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp AAACATTATTTCTTCCCAGCCTCTGGCGCCTCCGCCCATGGTGCCTaGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCGGCACC +
Preference number: 1 (lower is better)
Translates to: KHYFFPASGASAHGA*RVYTALEDMRSLGT
Trigger: GGTGCCGAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAGAAATAATGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp TCATTCTGCAAAGCAGCTCCAGCAGGTCTGCCTGCCGGAGTGAAGTaGGGCTCCTCTCTCTTCCCCTCCTTCTCCCCCTCCTCTCAGCCA +
Preference number: 1 (lower is better)
Translates to: SFCKAAPAGLPAGVK*GSSLFPSFSPSSQP
Trigger: TGGCTGAGAGGAGGGGGAGAAGGAGGGGAAGAGAGAGGAGCCCCACTTCACTCCGGCAGGCAGACCTGCTGGAGCTGCTTTGCAGAATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp CTGCTGTGTGTCCCTGACAACCTCCTTGGGCCTCAGGCTACCCTCTaGAGAACAGACAGCAGCAGACTCTGCTCTAGGAGGAGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: LLCVPDNLLGPQATL*RTDSSRLCSRRSSR
Trigger: CCTGGAGCTCCTCCTAGAGCAGAGTCTGCTGCTGTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp ATGTCCGCATCTCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTaGCTGCACCCCCAGCCAGGGCTGTTCACTGCACAAAGGGCCTGT +
Preference number: 1 (lower is better)
Translates to: MSASPRLVIGEFGHD*LHPQPGLFTAQRAC
Trigger: ACAGGCCCTTTGTGCAGTGAACAGCCCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGAGATGCGGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp AGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGACCTTAGGCCCATaGCTCAGTTTCCCAACCTGGAAAATGGGCTGCAGGAAGCCACTT +
Preference number: 1 (lower is better)
Translates to: SGGCFPRCGCGTLGP*LSFPTWKMGCRKPL
Trigger: AAGTGGCTTCCTGCAGCCCATTTTCCAGGTTGGGAAACTGAGGCATGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp CACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTGGGGGCTaGTTTCCTCGGTGTGGCTGTGGGACCTTAGGCCCATGCCTCAGT +
Preference number: 1 (lower is better)
Translates to: HEDHALWCMVTFSGG*FPRCGCGTLGPCLS
Trigger: ACTGAGGCATGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp CTCTCCTGCCCCTTCTGTGCTTCTCTTCTTGCGATGCCCTCTGGCTaGCCATGGGAGCTTTCCAAGGTGGCACAGTGCTTTCCACTGAAG +
Preference number: 1 (lower is better)
Translates to: LSCPFCASLLAMPSG*PWELSKVAQCFPLK
Trigger: CTTCAGTGGAAAGCACTGTGCCACCTTGGAAAGCTCCCATGGGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGAAGGGGCAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp GAAAATGTCCTGGGCAAGAGCGGAAGTGCCTCTGAGTGTCTCTCCTaGCCCTTCTGTGCTTCTCTTCTTGCGATGCCCTCTGGCTGCCCA +
Preference number: 1 (lower is better)
Translates to: ENVLGKSGSASECLS*PFCASLLAMPSGCP
Trigger: TGGGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGAAGGGGCAGGAGAGACACTCAGAGGCACTTCCGCTCTTGCCCAGGACATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp GGAAGGGAAGGGAAGGGAAGGGAAGACGGAGGAAGGAAAAGGCCGTaGACCTCCCGACCCAGGTCATCATCAAGGGACAGGTCCAACATT +
Preference number: 1 (lower is better)
Translates to: GREGKGREDGGRKRP*TSRPRSSSRDRSNI
Trigger: AATGTTGGACCTGTCCCTTGATGATGACCTGGGTCGGGAGGTGCACGGCCTTTTCCTTCCTCCGTCTTCCCTTCCCTTCCCTTCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp TGCCCCTTCTGTGCTTCTCTTCTTGCGATGCCCTCTGGCTGCCCATaGGAGCTTTCCAAGGTGGCACAGTGCTTTCCACTGAAGACAGGG +
Preference number: 1 (lower is better)
Translates to: CPFCASLLAMPSGCP*ELSKVAQCFPLKTG
Trigger: CCCTGTCTTCAGTGGAAAGCACTGTGCCACCTTGGAAAGCTCCCATGGGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGAAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp GTGTCTCTCCTGCCCCTTCTGTGCTTCTCTTCTTGCGATGCCCTCTaGCTGCCCATGGGAGCTTTCCAAGGTGGCACAGTGCTTTCCACT +
Preference number: 1 (lower is better)
Translates to: VSLLPLLCFSSCDAL*LPMGAFQGGTVLST
Trigger: AGTGGAAAGCACTGTGCCACCTTGGAAAGCTCCCATGGGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGAAGGGGCAGGAGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 90 bp ATCTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTaGCATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGACCT +
Preference number: 1 (lower is better)
Translates to: ISPLCVTRTMHFGAW*HSVGAAFLGVAVGP
Trigger: AGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 90 bp GGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCTaGCAACTCCAGCCACTGTCATCTCCCCTCTTTGTGTCACGAGGA +
Preference number: 1 (lower is better)
Translates to: GPVKPIRPGASSKQL*QLQPLSSPLFVSRG
Trigger: TCCTCGTGACACAAAGAGGGGAGATGACAGTGGCTGGAGTTGTCAGAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp ACTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTaGCTGTGGGACCTTAGGCCCATGCCTCAGTTTCCCAACCTGGAA +
Preference number: 1 (lower is better)
Translates to: TLVHGDIQWGLLSSV*LWDLRPMPQFPNLE
Trigger: TTCCAGGTTGGGAAACTGAGGCATGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp TTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTaGGGGCTGCTTTCCTCGGTGTGGCTGTGGGACCTTAGGCCCATG +
Preference number: 1 (lower is better)
Translates to: FVSRGPCTLVHGDIQ*GLLSSVWLWDLRPM
Trigger: CATGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp AGCCACTGTCATCTCCCCTCTTTGTGTCACGAGGACCATGCACTTTaGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGC +
Preference number: 1 (lower is better)
Translates to: SHCHLPSLCHEDHAL*CMVTFSGGCFPRCG
Trigger: GCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATGACAGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp GTAGTGATGACTCTGCTGGGAGGAGACACAGACCTCCCAGTTCAGTaGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTC +
Preference number: 1 (lower is better)
Translates to: VVMTLLGGDTDLPVQ*IPSESEGETGSSRV
Trigger: GACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAACTGGGAGGTCTGTGTCTCCTCCCAGCAGAGTCATCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp GAGAAGACTTCCTGGAGGAGACTGCAATCCCAGGTGTATTGGAGCTaGAGAGAAGAGGTTGAAAAGTGCTCCAGGCAGGGGGCACGGCTT +
Preference number: 1 (lower is better)
Translates to: EKTSWRRLQSQVYWS*REEVEKCSRQGARL
Trigger: AAGCCGTGCCCCCTGCCTGGAGCACTTTTCAACCTCTTCTCTGCAGCTCCAATACACCTGGGATTGCAGTCTCCTCCAGGAAGTCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp CACTGTCATCTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTaGATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: HCHLPSLCHEDHALW*MVTFSGGCFPRCGC
Trigger: ACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 90 bp CAACTCCAGCCACTGTCATCTCCCCTCTTTGTGTCACGAGGACCATaGACTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCG +
Preference number: 1 (lower is better)
Translates to: QLQPLSSPLFVSRGP*TLVHGDIQWGLLSS
Trigger: CGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATGACAGTGGCTGGAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp CAGCCAACAGGACTCTTAACTAAAACATTATTTCTTCCCAGCCTCTaGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGA +
Preference number: 1 (lower is better)
Translates to: QPTGLLTKTLFLPSL*RLRPWCLESVHGPR
Trigger: TCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAGAAATAATGTTTTAGTTAAGAGTCCTGTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp AGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTCCCCTTaGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCT +
Preference number: 1 (lower is better)
Translates to: SSLSFKAKTFHNSSP*PCQAYQAWSFLKAA
Trigger: AGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp CAAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATaGAGTAGCAGGAGAAAAACAGACTGGGGGAGCAGGAAGAGTCAG +
Preference number: 1 (lower is better)
Translates to: QTKWRDCGPNSGIHG*SSRRKTDWGSRKSQ
Trigger: CTGACTCTTCCTGCTCCCCCAGTCTGTTTTTCTCCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 90 bp AGCAGGGTCCTTGAGGGAAGTAGGCTCTCCTTGAAGGATAAGCAATaGCTGCATGAAGTAGCAGGTATTGAAGCTAGGGCTTTGAAGGAT +
Preference number: 1 (lower is better)
Translates to: SRVLEGSRLSLKDKQ*LHEVAGIEARALKD
Trigger: ATCCTTCAAAGCCCTAGCTTCAATACCTGCTACTTCATGCAGCCATTGCTTATCCTTCAAGGAGAGCCTACTTCCCTCAAGGACCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp CTTCCCAGCCTCTGGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTGCCCAGACCCTGGAGTaGGATCTAGGCTCCCGGGAG +
Preference number: 2 (lower is better)
Translates to: LPSLWRLRPWCLESVHGPAQTLE*DLGSRE
Trigger: CTCCCGGGAGCCTAGATCTCACTCCAGGGTCTGGGC...AGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp CTTCCCAGCCTCTGGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTGCCAGGGCTGTTCACTaGACAAAGGGCCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LPSLWRLRPWCLESVHGPARAVH*TKGLWG
Trigger: CCCCCACAGGCCCTTTGTGCAGTGAACAGCCCTGGC...AGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp CTTCCTCCACCAGCTCCCGGCATGGGTTGGGGACGCCTCAGTTCAGAGGGTGGTGTCCTTGTCAGGGACTaGGGCTCCAGCAGGAGTGTC +
Preference number: 2 (lower is better)
Translates to: LPPPAPGMGWGRLSSEGGVLVRD*GSSRSV
Trigger: GACACTCCTGCTGGAGCCCCAGTCCCTGACAAGGAC...ACCACCCTCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGCTGGTGGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGACGCACTCCCTGCAATaGCCCGCGATGACCTCCCAC +
Preference number: 2 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGTHSLQ*PAMTSH
Trigger: GTGGGAGGTCATCGCGGGGCATTGCAGGGAGTGCGT...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCACACAGTGCTTTCCACTaGAGACAGGGCACCCAGGGC +
Preference number: 2 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAHSAFH*RQGTQG
Trigger: GCCCTGGGTGCCCTGTCTTCAGTGGAAAGCACTGTG...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp AGCAGACTCTGCTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTGGGGAGGGAGGCAGGAGAAGTaGCTTCCAAAAGTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: SRLCSRRSSRGHTVGLWGGRQEK*LPKVPS
Trigger: AGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCCC...TCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCAGTACCCAGGTCCCCTTaGTCATGGCTCTGCCTCCTC +
Preference number: 2 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAVPRSP*SWLCLL
Trigger: GAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTAC...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCGAAATGGGGCACAGTTaGAGGCCTGAGAAGGAGCTA +
Preference number: 2 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLEMGHS*RPEKEL
Trigger: TAGCTCCTTCTCAGGCCTCCAACTGTGCCCCATTTC...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp GTTCCCCTTGGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCCACCTGTCCATGCTCTaGGTCCTGCAGCCAACAGGA +
Preference number: 2 (lower is better)
Translates to: VPLGPVKPIRPGASSKQLHLSML*VLQPTG
Trigger: TCCTGTTGGCTGCAGGACTCAGAGCATGGACAGGTG...GAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp GTTCAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTGCTCCCGGCATGGGTTaGGGACGCCTCAGTTCAGAG +
Preference number: 2 (lower is better)
Translates to: VQWIPSESEGETGSSRVLAPGMG*GRLSSE
Trigger: CTCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGC...AAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp CACGGCTGTCCCCGTGGTGGTGATTTACTATCCACCTGTCCATGCTCTGAGTCCGTCACACAGCAGAGCTaGAAGGCTCAAGGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: HGCPRGGDLLSTCPCSESVTQQS*KAQGSL
Trigger: GAGGGAGCCTTGAGCCTTTCAGCTCTGCTGTGTGAC...GGACTCAGAGCATGGACAGGTGGATAGTAAATCACCACCACGGGGACAGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCAGTGTCTGAAGCAGTGTaGATCAGCTGGTCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAVSEAV*ISWSGQ
Trigger: CTGGCCTGACCAGCTGATGCACACTGCTTCAGACAC...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp CTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTTCGGACACGACTGGCTaGACCCCCAGCCAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: LPSLCHEDHALWCMVTFSSDTTG*TPSQGC
Trigger: ACAGCCCTGGCTGGGGGTGCAGCCAGTCGTGTCCGA...ACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp CACGGCTGTCCCCGTGGTGGTGATTTACTATCCACCTGTCCATGCTCTGAGTCCGTTTCATGGTCCACCTaGGAGCCCAGACCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: HGCPRGGDLLSTCPCSESVSWST*EPRPWS
Trigger: ACTCCAGGGTCTGGGCTCCCAGGTGGACCATGAAAC...GGACTCAGAGCATGGACAGGTGGATAGTAAATCACCACCACGGGGACAGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCACAATCCCAGGTGTATTaGAGCTGCAGAGAAGAGGTT +
Preference number: 2 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPQSQVY*SCREEV
Trigger: AACCTCTTCTCTGCAGCTCCAATACACCTGGGATTG...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp CTGTGTGTCCCTGACAACCTCCTTGGGCCTCAGGCTACCCTCTGCAGAACAGACAGGCTAGGTGCTCTCTaGCTGGGAAGGAGGGAATCT +
Preference number: 2 (lower is better)
Translates to: LCVPDNLLGPQATLCRTDRLGAL*LGRRES
Trigger: AGATTCCCTCCTTCCCAGCCAGAGAGCACCTAGCCT...GTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGAGTTCGGACACGACTaGCTGCACCCCCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAEFGHD*LHPQPG
Trigger: CCCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTC...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CAA 90 bp CAGCCACTGTCATCTCCCCTCTTTGTGTCACGAGGACCATGCACTTaGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGG +
Preference number: 2 (lower is better)
Translates to: QPLSSPLFVSRGPCT*VHGDIQWGLLSSVW
Trigger: CCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATGACAGTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp CAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTGAGTCCAGCAGGAGTGTCTaGAGCAGTGTGCATCAGCTG +
Preference number: 2 (lower is better)
Translates to: QWIPSESEGETGSSRVLESSRSV*SSVHQL
Trigger: CAGCTGATGCACACTGCTTCAGACACTCCTGCTGGA...CTCAAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp CTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTAGCAGGGATCTGGGCTaGCTCCCCCTGCTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: LPSLCHEDHALWCMVTFSSRDLG*LPLLCV
Trigger: GACACACAGCAGGGGGAGGCAGCCCAGATCCCTGCT...ACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGTCCCCGCTTAGTCATTaGAGAGTTCGGACACGACTG +
Preference number: 2 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGSPLSH*RVRTRL
Trigger: CAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCACCTGCCGGAGTGAAGTaGGGCTCCTCTCTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAPAGVK*GSSLFP
Trigger: GGGGAAGAGAGAGGAGCCCCACTTCACTCCGGCAGG...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGGAATTGCAGGGTAGATaGCCGAAGTTTGGCAGATGC +
Preference number: 2 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGELQGR*PKFGRC
Trigger: GCATCTGCCAAACTTCGGGCATCTACCCTGCAATTC...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGATTTGGGGGTGGAAATaGGGCACAGTTGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRIWGWK*GTVGGL
Trigger: CAGGCCTCCAACTGTGCCCCATTTCCACCCCCAAAT...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAAGCCTACCAAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVASLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTTGGTAGGCT...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp TCATCAAGGGACAGGTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGCCCGGCACACTGCCCTaGGGGTCTCCACCCGGAATT +
Preference number: 2 (lower is better)
Translates to: SSRDRSNIIISEHASAVEPGTLP*GSPPGI
Trigger: AATTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGG...CTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGACCTGTCCCTTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp GTTCAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTCGGCTGTCAATCAAGTaGGACAGGGCTCCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: VQWIPSESEGETGSSRVLRLSIK*DRAPKR
Trigger: TCTTTTTGGAGCCCTGTCTCACTTGATTGACAGCCG...AAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp GTTCAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTCTTCCTGGAGGAGACTaGAATCCCAGGTGTATTGGA +
Preference number: 2 (lower is better)
Translates to: VQWIPSESEGETGSSRVLLPGGD*NPRCIG
Trigger: TCCAATACACCTGGGATTGCAGTCTCCTCCAGGAAG...AAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGCTTGGGCAAAGGTGTaGCTGGGAAAATGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAAWAKV*LGKCPG
Trigger: CCCAGGACATTTTCCCAGCCACACCTTTGCCCAAGC...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGTCCCAACCTGGAAAATaGGCTGCAGGAAGCCACTTT +
Preference number: 2 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRSQPGK*AAGSHF
Trigger: AAAGTGGCTTCCTGCAGCCCATTTTCCAGGTTGGGA...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTTGGCGCCTCCGCCCATaGTGCCTGGAGAGTGTACAC +
Preference number: 2 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVWRLRP*CLESVH
Trigger: GTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCA...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp CAGTGTGAGCTTTCTCCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACTGTCCCCGTGGTGGTaGTTTACTATCCACCTGTCC +
Preference number: 2 (lower is better)
Translates to: QCELSPDPKSAACHSRPRLSPWW*FTIHLS
Trigger: GGACAGGTGGATAGTAAATCACCACCACGGGGACAG...TCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGGAGAAAGCTCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGCTCCAAAAAGATGTaGACAAGTCCTGGCATGGAG +
Preference number: 2 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAGSKKM*TSPGME
Trigger: CTCCATGCCAGGACTTGTGCACATCTTTTTGGAGCC...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGTCGAGGCTTAAGAAATaGGTGGTGATTTGCATGCGA +
Preference number: 2 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRSRLKK*VVICMR
Trigger: TCGCATGCAAATCACCACCCATTTCTTAAGCCTCGA...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp GTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATGGGTCTTGCGATGCCCTCTaGCTGCCCATGGGAGCTTTC +
Preference number: 2 (lower is better)
Translates to: VQHYYFRTCQRCRGLRNGSCDAL*LPMGAF
Trigger: GAAAGCTCCCATGGGCAGCCAGAGGGCATCGCAAGA...CCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp CAGTGTGAGCTTTCTCCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGATTTCTTGCCAAACCCTaGCGAGGCATGTCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: QCELSPDPKSAACHSRPRFLAKP*RGMSLN
Trigger: ATTCAGGGACATGCCTCGTCAGGGTTTGGCAAGAAA...TCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGGAGAAAGCTCACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp GTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATGGGTGCCCCAAGACCCTATaGAAGACGAGGCATCCGGAT +
Preference number: 2 (lower is better)
Translates to: VQHYYFRTCQRCRGLRNGCPKTL*KTRHPD
Trigger: ATCCGGATGCCTCGTCTTGCATAGGGTCTTGGGGCA...CCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGGCAGGAAGCCACTTTTaGAACTTATGTTTATCTCAG +
Preference number: 2 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRAGSHF*NLCLSQ
Trigger: CTGAGATAAACATAAGTTGCAAAAGTGGCTTCCTGC...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR GCA 90 bp GTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATGGGTCCAAGGTGGCACAGTaGTTTCCACTGAAGACAGGG +
Preference number: 2 (lower is better)
Translates to: VQHYYFRTCQRCRGLRNGSKVAQ*FPLKTG
Trigger: CCCTGTCTTCAGTGGAAAGCACTGTGCCACCTTGGA...CCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTCTCAGTTTCCCAACCTaGAAAATGGGCTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVLSFPT*KMGCRK
Trigger: CTTCCTGCAGCCCATTTTCCAGGTTGGGAAACTGAG...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR TCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCACATGCGATTTGCATGTaGTTTGCATACTGTTTGTTA +
Preference number: 2 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAHAICM*FAYCLL
Trigger: TAACAAACAGTATGCAAATCACATGCAAATCGCATG...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp GGGCTGCGCAACGATGACGTGGCTGCAGGTCAGAGGTaGAACGGAGGCCCGGCACACTGCCCTGAGGGTCTC +
Preference number: 3 (lower is better)
Translates to: GLRNDDVAAGQR*NGGPAHCPEGL
Trigger: GAGACCCTCAGGGCAGTGTGCCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACGTCATCGTTGCGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp CCAAAGACCCTCCCCAGGGGCTGCGCAACGATGACGTaGCTGCAGGTCAGAGGTGCAACGGAGGCCCGGCAC +
Preference number: 3 (lower is better)
Translates to: PKTLPRGCATMT*LQVRGATEARH
Trigger: GTGCCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACGTCATCGTTGCGCAGCCCCTGGGGAGGGTCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp GCTGCAGGTCAGAGGTGCAACGGAGGCCCGGCACACTaGCCTGAGGGTCTCCACCCGGAATTCCCACAACGC +
Preference number: 3 (lower is better)
Translates to: AAGQRCNGGPAH*PEGLHPEFPQR
Trigger: GCGTTGTGGGAATTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGGCCTCCGTTGCACCTCTGACCTGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 72 bp AGGTCAGAGGTGCAACGGAGGCCCGGCACACTGCCCTaGGGGTCTCCACCCGGAATTCCCACAACGCACTCC +
Preference number: 3 (lower is better)
Translates to: RSEVQRRPGTLP*GSPPGIPTTHS
Trigger: GGAGTGCGTTGTGGGAATTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGGCCTCCGTTGCACCTCTGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp ATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATaGGTAGCCTCGGCACCCCCTCCCCAAAGACCCTCC +
Preference number: 3 (lower is better)
Translates to: MVPGECTRPSRT*VASAPPPQRPS
Trigger: GGAGGGTCTTTGGGGAGGGGGTGCCGAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp TTCTTCCCAGCCTCTGGCGCCTCCGCCCATGGTGCCTaGAGAGTGTACACGGCCCTCGAGGACATGCGTAGC +
Preference number: 3 (lower is better)
Translates to: FFPASGASAHGA*RVYTALEDMRS
Trigger: GCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCAGGCAGGGGGCACGGCTaGGGCAAAGGTGTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAGRGHG*GKGVAG
Trigger: CCCAGCCACACCTTTGCCCAAGCCGTGCCCCCTGCC...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 72 bp TGTGGCCCAGCTGTTAGCAGAGGCCCAAACCACGCATaGGCAGGGATCTGGGCTGCCTCCCCCTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: CGPAVSRGPNHA*AGIWAASPCCV
Trigger: CACACAGCAGGGGGAGGCAGCCCAGATCCCTGCTCATGCGTGGTTTGGGCCTCTGCTAACAGCTGGGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp CTTCCTCCACCAGCTCCCGGCATGGGTTGGGGACGCCTCAGTTCAGAGGGTGGTTCAGCCAAGCGGGAATaGCAGGGTAGATGCCCGAAG +
Preference number: 3 (lower is better)
Translates to: LPPPAPGMGWGRLSSEGGSAKRE*QGRCPK
Trigger: CTTCGGGCATCTACCCTGCAATTCCCGCTTGGCTGA...ACCACCCTCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGCTGGTGGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp TTATTTCTTCCCAGCCTCTGGCGCCTCCGCCCATGGTaGCTGGAGAGTGTACACGGCCCTCGAGGACATGCG +
Preference number: 3 (lower is better)
Translates to: LFLPSLWRLRPW*LESVHGPRGHA
Trigger: CGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAGAAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp CAGAGGCCCAAACCACGCATGAGCAGGGATCTGGGCTaGCTCCCCCTGCTGTGTGTCCCTGACAACCTCCTT +
Preference number: 3 (lower is better)
Translates to: QRPKPRMSRDLG*LPLLCVPDNLL
Trigger: AAGGAGGTTGTCAGGGACACACAGCAGGGGGAGGCAGCCCAGATCCCTGCTCATGCGTGGTTTGGGCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 72 bp CATGGGAGCTTTCCAAGGTGGCACAGTGCTTTCCACTaGAGACAGGGCACCCAGGGCCCCAAGAGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: HGSFPRWHSAFH*RQGTQGPKRGA
Trigger: TGCTCCCCTCTTGGGGCCCTGGGTGCCCTGTCTTCAGTGGAAAGCACTGTGCCACCTTGGAAAGCTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp GGGACTGGGGCTCCAGCAGGAGTGTCTGAAGCAGTGTaGATCAGCTGGTCAGGCCAGGGTTTCATGGTCCAC +
Preference number: 3 (lower is better)
Translates to: GTGAPAGVSEAV*ISWSGQGFMVH
Trigger: GTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGCCCCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp GCTCCAGCAGGAGTGTCTGAAGCAGTGTGCATCAGCTaGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCC +
Preference number: 3 (lower is better)
Translates to: APAGVSEAVCIS*SGQGFMVHLGA
Trigger: GGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp TCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTaGGGACAAAGTCCTGGGTTAGGCACCAAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: SRRSSRGHTVGL*GQSPGLGTKGR
Trigger: TCTCCCCTTGGTGCCTAACCCAGGACTTTGTCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp GTTCCCCTTGGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCAGTACCCAGGTCCCCTaGGTCATGGCTCTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: VPLGPVKPIRPGASSKQLSTQVP*VMALPP
Trigger: AGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACT...GAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCGCAATCCCAGGTGTATaGGAGCTGCAGAGAAGAGGT +
Preference number: 3 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLAIPGV*ELQRRG
Trigger: ACCTCTTCTCTGCAGCTCCAATACACCTGGGATTGC...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCACAGATCCTCGTCCTCTaGGCCAGAGTTCTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPQILVL*ARVLQN
Trigger: GTTCTGAAGAACTCTGGCCAAGAGGACGAGGATCTG...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp CCTCTTGGCCAGAGTTCTTCAGAACCCCTTCCCCGCTaGCCCAAGACCCTATGCAAGACGAGGCATCCGGAT +
Preference number: 3 (lower is better)
Translates to: PLGQSSSEPLPR*PKTLCKTRHPD
Trigger: ATCCGGATGCCTCGTCTTGCATAGGGTCTTGGGGCAGCGGGGAAGGGGTTCTGAAGAACTCTGGCCAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp CTGCCCCTTCTGTGCTTCTCTTCTTGCGATGCCCTCTaGCTGCCCATGGGAGCTTTCCAAGGTGGCACAGTG +
Preference number: 3 (lower is better)
Translates to: LPLLCFSSCDAL*LPMGAFQGGTV
Trigger: CACTGTGCCACCTTGGAAAGCTCCCATGGGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGAAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp TCTCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTaGCTGCACCCCCAGCCAGGGCTGTTCACTGCACAA +
Preference number: 3 (lower is better)
Translates to: SPRLVIGEFGHD*LHPQPGLFTAQ
Trigger: TTGTGCAGTGAACAGCCCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp ACATTATTTCTTCCCAGCCTCTGGCGCCTCCGCCCATaGTGCCTGGAGAGTGTACACGGCCCTCGAGGACAT +
Preference number: 3 (lower is better)
Translates to: TLFLPSLWRLRP*CLESVHGPRGH
Trigger: ATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCAGAGGCTGGGAAGAAATAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp GACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTaGGACCTTAGGCCCATGCCTCAGTTTCCCAACCTG +
Preference number: 3 (lower is better)
Translates to: DIQWGLLSSVWL*DLRPMPQFPNL
Trigger: CAGGTTGGGAAACTGAGGCATGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp AGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCAGTACCCAGGTCCCCTaGGTCATGGCTCTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: RQEKCLPKVPSTPAYSFSSTQVP*VMALPP
Trigger: AGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACT...GCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
3UTR-3UTR CAA 90 bp CACGGCTGTCCCCGTGGTGGTGATTTACTATCCACCTGTCCATGCTCTGAGTCCTCTGTGCTTCTCTTCTaGCGATGCCCTCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: HGCPRGGDLLSTCPCSESSVLLF*RCPLAA
Trigger: GGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGA...GGACTCAGAGCATGGACAGGTGGATAGTAAATCACCACCACGGGGACAGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp TGCTTTCCTCGGTGTGGCTGTGGGACCTTAGGCCCATaGCTCAGTTTCCCAACCTGGAAAATGGGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: CFPRCGCGTLGP*LSFPTWKMGCR
Trigger: CCTGCAGCCCATTTTCCAGGTTGGGAAACTGAGGCATGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp CATGCACTTTGGTGCATGGTGACATTCAGTGGGGGCTaGTTTCCTCGGTGTGGCTGTGGGACCTTAGGCCCA +
Preference number: 3 (lower is better)
Translates to: HALWCMVTFSGG*FPRCGCGTLGP
Trigger: TGGGCCTAAGGTCCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp CTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTaGATGGTGACATTCAGTGGGGGCTGCTTTCCTCGG +
Preference number: 3 (lower is better)
Translates to: LPSLCHEDHALW*MVTFSGGCFPR
Trigger: CCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp ACTCTGCTGGGAGGAGACACAGACCTCCCAGTTCAGTaGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGC +
Preference number: 3 (lower is better)
Translates to: TLLGGDTDLPVQ*IPSESEGETGS
Trigger: GCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAACTGGGAGGTCTGTGTCTCCTCCCAGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR TCA 72 bp CTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTaGCATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCT +
Preference number: 3 (lower is better)
Translates to: LCVTRTMHFGAW*HSVGAAFLGVA
Trigger: AGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp TCCTGGAGGAGACTGCAATCCCAGGTGTATTGGAGCTaGAGAGAAGAGGTTGAAAAGTGCTCCAGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: SWRRLQSQVYWS*REEVEKCSRQG
Trigger: CCCCTGCCTGGAGCACTTTTCAACCTCTTCTCTGCAGCTCCAATACACCTGGGATTGCAGTCTCCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR GCA 72 bp CCACTGTCATCTCCCCTCTTTGTGTCACGAGGACCATaGACTTTGGTGCATGGTGACATTCAGTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: PLSSPLFVSRGP*TLVHGDIQWGL
Trigger: CAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATGACAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR-3UTR CAA 90 bp CAGTGTGAGCTTTCTCCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGAAGCTCCCGGCATGGGTaGGGGACGCCTCAGTTCAGA +
Preference number: 3 (lower is better)
Translates to: QCELSPDPKSAACHSRPRSSRHG*GTPQFR
Trigger: TCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGCT...TCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGGAGAAAGCTCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp CATCTCCCCTCTTTGTGTCACGAGGACCATGCACTTTaGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: HLPSLCHEDHAL*CMVTFSGGCFP
Trigger: AGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp TCATTCAAGGCCAAGACATTCCACAATAGTTCCCCTTaGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: SFKAKTFHNSSP*PCQAYQAWSFL
Trigger: GAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAACTATTGTGGAATGTCTTGGCCTTGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp GACAGGGCTCCAAAAAGATGTGCACAAGTCCTGGCATaGAGTAAGGACCAAGGAATGAAACTGGGGAGATTA +
Preference number: 3 (lower is better)
Translates to: DRAPKRCAQVLA*SKDQGMKLGRL
Trigger: TAATCTCCCCAGTTTCATTCCTTGGTCCTTACTCCATGCCAGGACTTGTGCACATCTTTTTGGAGCCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp CTTGAGGGAAGTAGGCTCTCCTTGAAGGATAAGCAATaGCTGCATGAAGTAGCAGGTATTGAAGCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: LEGSRLSLKDKQ*LHEVAGIEARA
Trigger: AGCCCTAGCTTCAATACCTGCTACTTCATGCAGCCATTGCTTATCCTTCAAGGAGAGCCTACTTCCCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CCA 72 bp TTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATaGGTGGTGATTTGCATGCGATTTGCATGTGATTTG +
Preference number: 3 (lower is better)
Translates to: FQNMPALSRLKK*VVICMRFACDL
Trigger: CAAATCACATGCAAATCGCATGCAAATCACCACCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CTTCCTCCACCAGCTCCCGGCATGGGTTGGGGACGCCTCAGTTCAGAGGGTGGTCCCTGGCCCACCAGCTaGGCGCGCAGGTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPPPAPGMGWGRLSSEGGPWPTS*ARRSLS
Trigger: GCTCAGCGACCTGCGCGCCCAGCTGGTGGGCCAGGG...ACCACCCTCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGCTGGTGGAGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCCGGCCCTCGAGGACATaGGTAGCCTCGGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLRPSRT*VASAPP
Trigger: AGGGGGTGCCGAGGCTACGCATGTCCTCGAGGGCCG...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AGGGGCTGCGCAACGATGACGTGGCTGCAGGTCAGAGGTGCAACGGAGGCCCGGTGGGCTGCCTCCCCCTaGTGTGTGTCCCTGACAACC +
Preference number: 4 (lower is better)
Translates to: RGCATMTWLQVRGATEARWAASP*CVSLTT
Trigger: GGTTGTCAGGGACACACAGCAGGGGGAGGCAGCCCA...CCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACGTCATCGTTGCGCAGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCCCCTGGCCCACCAGCTaGGCGCGCAGGTCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AYSFSQYPGPLGHGSASSPWPTS*ARRSLS
Trigger: GCTCAGCGACCTGCGCGCCCAGCTGGTGGGCCAGGG...GGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR TCA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCACTACCTGGGGTCGCTaGCGAGCAGCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLTTWGR*RAAAPS
Trigger: GCTCGGTGCTGCTGCTCGTCAGCGACCCCAGGTAGT...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCTGCAATGCCCCGCGATaGCCTCCCACAGCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLCNAPR*PPTARP
Trigger: GGGCCTAGCTGTGGGAGGTCATCGCGGGGCATTGCA...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CCGGGAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTAGCACCGAGCCGTCCTaGAGGCGCGCGTCGCGCACC +
Preference number: 4 (lower is better)
Translates to: PGGRRSAFQKCPLPQPIPSTEPS*RRASRT
Trigger: GGTGCGCGACGCGCGCCTGCAGGACGGCTCGGTGCT...AGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR CCA 90 bp CCGGGAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTCAGGAGCTCACGCCCTaGCCCACCAGCTGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PGGRRSAFQKCPLPQPIPQELTP*PTSWAR
Trigger: GCGCGCCCAGCTGGTGGGCCAGGGCGTGAGCTCCTG...AGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR CCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAGCGTCGCGCACCGTCTaGTGGTCGTCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPASRTV*WSSSRR
Trigger: GCGGCGGCTGGACGACCACCAGACGGTGCGCGACGC...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR CCA 90 bp CTTGGCTGTTTTCTGCCACCTGGAGTGAGATCTAGGCTCCCGGGAGGCAGGAGAGCGTCGCGCACCGTCTaGTGGTCGTCCAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LGCFLPPGVRSRLPGGRRASRTV*WSSSRR
Trigger: GCGGCGGCTGGACGACCACCAGACGGTGCGCGACGC...TCTCCTGCCTCCCGGGAGCCTAGATCTCACTCCAGGTGGCAGAAAACAGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR CCA 90 bp AGGGGCTGCGCAACGATGACGTGGCTGCAGGTCAGAGGTGCAACGGAGGCCCGGGTACCCAGGTCCCCTTaGTCATGGCTCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGCATMTWLQVRGATEARVPRSP*SWLCLL
Trigger: GAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTAC...CCGGGCCTCCGTTGCACCTCTGACCTGCAGCCACGTCATCGTTGCGCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCAGCTCCCGGCATGGGTTaGGGACGCCTCAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPAPGMG*GRLSSE
Trigger: CTCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGC...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCCACCAGCTCCCGGCATaGGTTGGGGACGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLHQLPA*VGDASV
Trigger: AACTGAGGCGTCCCCAACCCATGCCGGGAGCTGGTG...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCCGCCTCCGCCCATGGTaGCTGGAGAGTGTACACGGC +
Preference number: 4 (lower is better)
Translates to: AYSFSQYPGPLGHGSASSRLRPW*LESVHG
Trigger: GCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCG...GGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCAGGAAGGAAAAGGCCGTaGACCTCCCGACCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPGRKRP*TSRPRS
Trigger: TGACCTGGGTCGGGAGGTGCACGGCCTTTTCCTTCC...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGCAGGAGCTCACGCCCTaGCCCACCAGCTGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRQELTP*PTSWAR
Trigger: GCGCGCCCAGCTGGTGGGCCAGGGCGTGAGCTCCTG...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGTCGCGCACCGTCTGGTaGTCGTCCAGCCGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: EAGEVPSKSALYPSLFLQSRTVW*SSSRRA
Trigger: CGCGCGGCGGCTGGACGACCACCAGACGGTGCGCGA...CTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR CCA 90 bp GACCTCCCACAGCTAGGCCCAGTTCCCCACCCCCAGATCCTCGTCCTCTTGGCCCTGGGGACAAAGTCCTaGGTTAGGCACCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: DLPQLGPVPHPQILVLLALGTKS*VRHQGE
Trigger: CTCCCCTTGGTGCCTAACCCAGGACTTTGTCCCCAG...GGCCAAGAGGACGAGGATCTGGGGGTGGGGAACTGGGCCTAGCTGTGGGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCAAGCCTACCAAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPSLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTTGGTAGGCT...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCGGGAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTGCCCAGACCCTGGAGTaGGATCTAGGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PGGRRSAFQKCPLPQPIPAQTLE*DLGSRE
Trigger: CTCCCGGGAGCCTAGATCTCACTCCAGGGTCTGGGC...AGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CTGTGTGTCCCTGACAACCTCCTTGGGCCTCAGGCTACCCTCTGCAGAACAGACGGGGCTGCGCAACGATaGCGTGGCTGCAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LCVPDNLLGPQATLCRTDGAAQR*RGCRSE
Trigger: CTCTGACCTGCAGCCACGTCATCGTTGCGCAGCCCC...GTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGGGCCCAAACCACGCATaGGCAGGGATCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGGPNHA*AGIWAA
Trigger: GGCAGCCCAGATCCCTGCTCATGCGTGGTTTGGGCC...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTAGCACCGAGCCGTCCTaGAGGCGCGCGTCGCGCACC +
Preference number: 4 (lower is better)
Translates to: RRSAFQKCPLPQPIPSASSTEPS*RRASRT
Trigger: GGTGCGCGACGCGCGCCTGCAGGACGGCTCGGTGCT...ACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR GCA 90 bp GACCTCCCACAGCTAGGCCCAGTTCCCCACCCCCAGATCCTCGTCCTCTTGGCCCCAAAGAAGGCTAGGTaGTCTCTGGCTGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DLPQLGPVPHPQILVLLAPKKAR*SLAGKE
Trigger: CTCCTTCCCAGCCAGAGAGCACCTAGCCTTCTTTGG...GGCCAAGAGGACGAGGATCTGGGGGTGGGGAACTGGGCCTAGCTGTGGGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCAGCAGGGGGCACGGCTTaGGCAAAGGTGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAAGGTA*AKVWLG
Trigger: TCCCAGCCACACCTTTGCCCAAGCCGTGCCCCCTGC...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAAAACAGCCCAGGGGGTaGGCACAGGTGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPKQPRG*AQVPPG
Trigger: CCCAGGAGGCACCTGTGCCCACCCCCTGGGCTGTTT...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGCAGTGTGCATCAGCTGGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCCCATTTCTTCCCAGCCTCTaGCGCCTCCGCCCATGGTGC +
Preference number: 4 (lower is better)
Translates to: SSVHQLVRPGFHGPPGSPFLPSL*RLRPWC
Trigger: GCACCATGGGCGGAGGCGCCAGAGGCTGGGAAGAAA...TGGGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGTGCCTTCCAAAAGTaGCCTCTACCCCAGCCTATT +
Preference number: 4 (lower is better)
Translates to: GASAHGAWRVYTALEDMRSAFQK*PLPQPI
Trigger: AATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACT...ACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAGCCAGGGCTGTTCACTaGACAAAGGGCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPARAVH*TKGLWG
Trigger: CCCCCACAGGCCCTTTGTGCAGTGAACAGCCCTGGC...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTGAGTCGGACACGACTGGCTaGACCCCCAGCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QWIPSESEGETGSSRVLESDTTG*TPSQGC
Trigger: ACAGCCCTGGCTGGGGGTGCAGCCAGTCGTGTCCGA...CTCAAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GCTGCAGAGAAGAGGTTGAAAAGTGCTCCAGGCAGGGGGCACGGCTTGGGCAAAACGCACTCCCTGCAATaGCCCGCGATGACCTCCCAC +
Preference number: 4 (lower is better)
Translates to: AAEKRLKSAPGRGHGLGKTHSLQ*PAMTSH
Trigger: GTGGGAGGTCATCGCGGGGCATTGCAGGGAGTGCGT...TTTGCCCAAGCCGTGCCCCCTGCCTGGAGCACTTTTCAACCTCTTCTCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGTCCAGCAGGTCTGCCTaGCGGAGTGAAGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGSSRSA*RSEVGL
Trigger: GAGCCCCACTTCACTCCGGCAGGCAGACCTGCTGGA...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCAAGCAGGGATCTGGGCTaGCTCCCCCTGCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLASRDLG*LPLLCV
Trigger: GACACACAGCAGGGGGAGGCAGCCCAGATCCCTGCT...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp TCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTGGCTGCACCCCCAGCCAGGGTTTCATGGTCCACCTaGGAGCCCAGACCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SPLSHWRVRTRLAAPPARVSWST*EPRPWS
Trigger: ACTCCAGGGTCTGGGCTCCCAGGTGGACCATGAAAC...CCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GACCTCCCACAGCTAGGCCCAGTTCCCCACCCCCAGATCCTCGTCCTCTTGGCCGAAATGGGGCACAGTTaGAGGCCTGAGAAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: DLPQLGPVPHPQILVLLAEMGHS*RPEKEL
Trigger: TAGCTCCTTCTCAGGCCTCCAACTGTGCCCCATTTC...GGCCAAGAGGACGAGGATCTGGGGGTGGGGAACTGGGCCTAGCTGTGGGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGATCCTCGTCCTCTTaGCCAGAGTTCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: GASAHGAWRVYTALEDMRRSSSS*PEFFRT
Trigger: GGTTCTGAAGAACTCTGGCCAAGAGGACGAGGATCT...ACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCATCCGCCCATGGTGCCTaGAGAGTGTACACGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLASAHGA*RVYTAL
Trigger: GAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCATGGCGCCTCCGCCCATaGTGCCTGGAGAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPWRLRP*CLESVH
Trigger: GTGTACACTCTCCAGGCACCATGGGCGGAGGCGCCA...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAGTGAGCCACCGCGCCTaGCCGGCTGTCAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPVSHRA*PAVNQV
Trigger: CACTTGATTGACAGCCGGCCAGGCGCGGTGGCTCAC...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp GGAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAACTACCTGGGGTCGCTaGCGAGCAGCAGCACCGAGC +
Preference number: 4 (lower is better)
Translates to: GGRRSAFQKCPLPQPIPSTTWGR*RAAAPS
Trigger: GCTCGGTGCTGCTGCTCGTCAGCGACCCCAGGTAGT...TGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR TCA 90 bp GCTGCAGAGAAGAGGTTGAAAAGTGCTCCAGGCAGGGGGCACGGCTTGGGCAAAGAGCGGAAGTGCCTCTaGGTGTCTCTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: AAEKRLKSAPGRGHGLGKERKCL*VSLLPL
Trigger: AAGGGGCAGGAGAGACACTCAGAGGCACTTCCGCTC...TTTGCCCAAGCCGTGCCCCCTGCCTGGAGCACTTTTCAACCTCTTCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp TCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTGGCTGCACCCCCAGCCAGGCAGTTCAGAGGGTGGTaGCCTTGGGCAAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SPLSHWRVRTRLAAPPARQFRGW*PWASQK
Trigger: CTTTTGGCTTGCCCAAGGTCACCACCCTCTGAACTG...CCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTGGAGGCCCGGCACACTaGCCTGAGGGTCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: LPSLCHEDHALWCMVTFSGGPAH*PEGLHP
Trigger: CGGGTGGAGACCCTCAGGGCAGTGTGCCGGGCCTCC...ACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AGCAGACTCTGCTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTGGGGACAGCCAAGCGGGAATTaGAGGGTAGATGCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: SRLCSRRSSRGHTVGLWGQPSGN*RVDARS
Trigger: ACTTCGGGCATCTACCCTGCAATTCCCGCTTGGCTG...TCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp TCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTGGCTGCACCCCCAGCCAGGGCAGTGTGCATCAGCTaGTCAGGCCAGGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: SPLSHWRVRTRLAAPPARAVCIS*SGQGFM
Trigger: CATGAAACCCTGGCCTGACCAGCTGATGCACACTGC...CCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CTGTGTGTCCCTGACAACCTCCTTGGGCCTCAGGCTACCCTCTGCAGAACAGACGTCCTTGTCAGGGACTaGGGCTCCAGCAGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LCVPDNLLGPQATLCRTDVLVRD*GSSRSV
Trigger: GACACTCCTGCTGGAGCCCCAGTCCCTGACAAGGAC...GTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGCAGACTCTGCTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTGGGGAGCTTGGGCAAAGGTGTaGCTGGGAAAATGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRLCSRRSSRGHTVGLWGAWAKV*LGKCPG
Trigger: CCCAGGACATTTTCCCAGCCACACCTTTGCCCAAGC...TCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGCAGACTCTGCTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTGGGGAATTTGGGGGTGGAAATaGGGCACAGTTGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRLCSRRSSRGHTVGLWGIWGWK*GTVGGL
Trigger: CAGGCCTCCAACTGTGCCCCATTTCCACCCCCAAAT...TCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAAGCCATCTGTAAAATaGGCTGTTATCCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GASAHGAWRVYTALEDMRKPSVK*AVILAP
Trigger: AGGGGCCAGGATAACAGCCCATTTTACAGATGGCTT...ACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCACACCTCCACCCCCAGTaGAGAAGCGGGAAACCCTTC +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPHLHPQ*RSGKPF
Trigger: GAAGGGTTTCCCGCTTCTCCACTGGGGGTGGAGGTG...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CAA 72 bp CAGCCAAGCGGGAATTGCAGGGTAGATGCCCGAAGTTaGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: QPSGNCRVDARS*ADALKGGEQET
Trigger: GGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCATCTACCCTGCAATTCCCGCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAGCACAGTTGGAGGCCTaGGAAGGAGCTAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPAQLEA*EGARMS
Trigger: GGACATCCTAGCTCCTTCTCAGGCCTCCAACTGTGC...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCACACCTGTCCATGCTCTaGGTCCTGCAGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPHLSML*VLQPTG
Trigger: TCCTGTTGGCTGCAGGACTCAGAGCATGGACAGGTG...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp AGCAGTGTGCATCAGCTGGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCCCACACTTTGGTGCATGGTaGCATTCAGTGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSVHQLVRPGFHGPPGSPHFGAW*HSVGAA
Trigger: AGCAGCCCCCACTGAATGTCACCATGCACCAAAGTG...TGGGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGCAGTGTGCATCAGCTGGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCCCAAGGCTAGGTGCTCTCTaGCTGGGAAGGAGGGAATCT +
Preference number: 4 (lower is better)
Translates to: SSVHQLVRPGFHGPPGSPRLGAL*LGRRES
Trigger: AGATTCCCTCCTTCCCAGCCAGAGAGCACCTAGCCT...TGGGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCAGCAAACGCACAGTCTaGGCACGGCTGTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RQEKCLPKVPSTPAYSFSSKRTV*ARLSPW
Trigger: CCACGGGGACAGCCGTGCCCAGACTGTGCGTTTGCT...GCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GACCTCCCACAGCTAGGCCCAGTTCCCCACCCCCAGATCCTCGTCCTCTTGGCCAGGCCAGGGAGGTCTTaGACAAATGATGTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: DLPQLGPVPHPQILVLLARPGRS*TNDVKE
Trigger: TTCCTTCACATCATTTGTCCAAGACCTCCCTGGCCT...GGCCAAGAGGACGAGGATCTGGGGGTGGGGAACTGGGCCTAGCTGTGGGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp TCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTAGCCTCCACAATAGTTCCCCTTaGCCCTGTCAAGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: SAHGAWRVYTALEDMRSLHNSSP*PCQAYQ
Trigger: CTGATAGGCTTGACAGGGCCAAGGGGAACTATTGTG...GAGGCTACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGCAGACTCTGCTCTAGGAGGAGCTCCAGGGGGCACACAGTGGGTCTCTGGGGACAAGTGGAGGGACTGTaGCCCAAACTCAGGGATACA +
Preference number: 4 (lower is better)
Translates to: SRLCSRRSSRGHTVGLWGQVEGL*PKLRDT
Trigger: TGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTG...TCCCCAGAGACCCACTGTGTGCCCCCTGGAGCTCCTCCTAGAGCAGAGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAACCCAGGACCTCCCAGTTCAGTaGATCCCGAGTGAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSASTQVPLVMALPPPTQDLPVQ*IPSESE
Trigger: TTCTGACTCACTCGGGATCCACTGAACTGGGAGGTC...CTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp GTTCCCCTTGGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCTCCAGCAGGAGTGTCTaGAGCAGTGTGCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPLGPVKPIRPGASSKQLSSRSV*SSVHQL
Trigger: CAGCTGATGCACACTGCTTCAGACACTCCTGCTGGA...GAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGCACAGTGCTTTCCACTaGAGACAGGGCACCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRHSAFH*RQGTQG
Trigger: GCCCTGGGTGCCCTGTCTTCAGTGGAAAGCACTGTG...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp AGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGTTCTGCCACCTGGAGTaGGATCTAGGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SAFQKCPLPQPIPSASTQFCHLE*DLGSRE
Trigger: CTCCCGGGAGCCTAGATCTCACTCCAGGTGGCAGAA...CTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR GCA 90 bp GCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGGTCGAAGAGGTTGAAAAGTaGTCCAGGCAGGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: AFQKCPLPQPIPSASTQVEEVEK*SRQGAR
Trigger: CCGTGCCCCCTGCCTGGAGCACTTTTCAACCTCTTC...GACCTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGTCCCTCCCGATAGGCTaGGCAGGAGCAAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGSLPIG*AGAKMS
Trigger: GGACATTTTTGCTCCTGCCCAGCCTATCGGGAGGGA...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAGCTGGGAAAATGTCCTaGGCAAGAGCGGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PIPSASTQVPLVMALPPPAGKMS*ARAEVP
Trigger: AGGCACTTCCGCTCTTGCCCAGGACATTTTCCCAGC...TGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GTTCCCCTTGGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCAATGGGCTGTTATCCTaGCCCCTGAGCAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VPLGPVKPIRPGASSKQLNGLLS*PLSSEA
Trigger: AGCCTCACTGCTCAGGGGCCAGGATAACAGCCCATT...GAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp TTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAACCCCGGCTGTCAATCAAGTaGGACAGGGCTCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: FLQPVPRSPWSWLCLLQPRLSIK*DRAPKR
Trigger: TCTTTTTGGAGCCCTGTCTCACTTGATTGACAGCCG...GGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAGTGCCTTCCAAAAGTaGCCTCTACCCCAGCCTATT +
Preference number: 4 (lower is better)
Translates to: AYSFSQYPGPLGHGSASSSAFQK*PLPQPI
Trigger: AATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACT...GGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR GCA 90 bp AGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGCTTCTCTTCTTGCGATaGCCTCTGGCTGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SAFQKCPLPQPIPSASTQLLFLR*PLAAHG
Trigger: CCCATGGGCAGCCAGAGGGCATCGCAAGAAGAGAAG...CTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CACGGCTGTCCCCGTGGTGGTGATTTACTATCCACCTGTCCATGCTCTGAGTCCTGCCCCAAGACCCTATaGAAGACGAGGCATCCGGAT +
Preference number: 4 (lower is better)
Translates to: HGCPRGGDLLSTCPCSESCPKTL*KTRHPD
Trigger: ATCCGGATGCCTCGTCTTGCATAGGGTCTTGGGGCA...GGACTCAGAGCATGGACAGGTGGATAGTAAATCACCACCACGGGGACAGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp TCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTGGCTGCACCCCCAGCCAGGACCTGGAAAATGGGCTaGAGGAAGCCACTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: SPLSHWRVRTRLAAPPARTWKMG*RKPLLQ
Trigger: TTGCAAAAGTGGCTTCCTGCAGCCCATTTTCCAGGT...CCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGGTCACATTCAGTGGGGGCTaGTTTCCTCGGTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AFQKCPLPQPIPSASTQVTFSGG*FPRCGC
Trigger: ACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGT...GACCTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GGAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCATGCGCAACGATGACGTaGCTGCAGGTCAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGRRSAFQKCPLPQPIPSCATMT*LQVRGA
Trigger: TGCACCTCTGACCTGCAGCCACGTCATCGTTGCGCA...TGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CAGGGACTGGGGCTCCAGCAGGAGTGTCTGAAGCAGTGTGCATCAGCTGGTCAGGCACAAGTCCTGGCATaGAGTAAGGACCAAGGAATG +
Preference number: 4 (lower is better)
Translates to: QGLGLQQECLKQCASAGQAQVLA*SKDQGM
Trigger: CATTCCTTGGTCCTTACTCCATGCCAGGACTTGTGC...CTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGCCCCAGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CTGTGTGTCCCTGACAACCTCCTTGGGCCTCAGGCTACCCTCTGCAGAACAGACGACATGCAAACCAAGTaGAGGGACTGTGGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LCVPDNLLGPQATLCRTDDMQTK*RDCGPN
Trigger: GTTTGGGCCACAGTCCCTCCACTTGGTTTGCATGTC...GTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCATATCTAGTTCCAAGCTaGGTGATCCTGCGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAYLVPS*VILRPQ
Trigger: TTGGGGCCGCAGGATCACCCAGCTTGGAACTAGATA...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp AGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCTGCAGAGAAGAGGTTaGAAAGTGCTCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQEKCLPKVPSTPAYSFSLQRRG*KVLQAG
Trigger: CCCTGCCTGGAGCACTTTTCAACCTCTTCTCTGCAG...GCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGTTTCTTGCCAAACCCTaGCGAGGCATGTCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGFLAKP*RGMSLN
Trigger: ATTCAGGGACATGCCTCGTCAGGGTTTGGCAAGAAA...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp GGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTCATGCGATTTGCATGTaGTTTGCATACTGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: GASAHGAWRVYTALEDMRHAICM*FAYCLL
Trigger: TAACAAACAGTATGCAAATCACATGCAAATCGCATG...ACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGCGATGCCCTCTGGCTaGCCATGGGAGCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAAMPSG*PWELSK
Trigger: CTTGGAAAGCTCCCATGGGCAGCCAGAGGGCATCGC...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GTTCAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTCTCCTGCCCCTTCTGTaGTTCTCTTCTTGCGATGCC +
Preference number: 4 (lower is better)
Translates to: VQWIPSESEGETGSSRVLLLPLL*FSSCDA
Trigger: GGCATCGCAAGAAGAGAAGCACAGAAGGGGCAGGAG...AAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTGAACCCCTTCCCCGCTaGCCCAAGACCCTATGCAAG +
Preference number: 4 (lower is better)
Translates to: LPSLCHEDHALWCMVTFSEPLPR*PKTLCK
Trigger: CTTGCATAGGGTCTTGGGGCAGCGGGGAAGGGGTTC...ACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GTTCCCCTTGGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCGAATTGCAGGGTAGATaGCCGAAGTTTGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: VPLGPVKPIRPGASSKQLELQGR*PKFGRC
Trigger: GCATCTGCCAAACTTCGGGCATCTACCCTGCAATTC...GAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GACCTCCCACAGCTAGGCCCAGTTCCCCACCCCCAGATCCTCGTCCTCTTGGCCGGGGAGATTATTAAATaGCCCATTTTCTTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: DLPQLGPVPHPQILVLLAGEIIK*PIFLPN
Trigger: GTTTGGCAAGAAAATGGGGCATTTAATAATCTCCCC...GGCCAAGAGGACGAGGATCTGGGGGTGGGGAACTGGGCCTAGCTGTGGGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CTTTGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCCTCGGTGTGGCTGTGGGGGCTCCAAAAAGATGTaGACAAGTCCTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LWCMVTFSGGCFPRCGCGGSKKM*TSPGME
Trigger: CTCCATGCCAGGACTTGTGCACATCTTTTTGGAGCC...CCCACAGCCACACCGAGGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CAGGGACTGGGGCTCCAGCAGGAGTGTCTGAAGCAGTGTGCATCAGCTGGTCAGAAAGAAGGTGGGACATaGAAACCAAGTGGAGGGACT +
Preference number: 4 (lower is better)
Translates to: QGLGLQQECLKQCASAGQKEGGT*KPSGGT
Trigger: AGTCCCTCCACTTGGTTTGCATGTCCCACCTTCTTT...CTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGCCCCAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CTGGGTTCAAGCGATTCTCTTGGAACTTGGCTGTTTTCTGCCACCTGGAGTGAGGTACCCAGGTCCCCTTaGTCATGGCTCTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGSSDSLGTWLFSATWSEVPRSP*SWLCLL
Trigger: GAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTAC...CTCACTCCAGGTGGCAGAAAACAGCCAAGTTCCAAGAGAATCGCTTGAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR CCA 90 bp CAGTGTGAGCTTTCTCCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGAGAGTTCGGACACGACTaGCTGCACCCCCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QCELSPDPKSAACHSRPREFGHD*LHPQPG
Trigger: CCCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTC...TCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGGAGAAAGCTCACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GTTCAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTCATGGTGACATTCAGTaGGGGCTGCTTTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VQWIPSESEGETGSSRVLHGDIQ*GLLSSV
Trigger: CACCGAGGAAAGCAGCCCCCACTGAATGTCACCATG...AAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGGTCCAAGCCTATCAGGCCTaGAGCTTCCTCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AFQKCPLPQPIPSASTQVQAYQA*SFLKAA
Trigger: AGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTG...GACCTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp AAACAGACTGGGGGAGCAGGAAGAGTCAGTGTGAGCTTTCTCCAGATCCAAAATCCGCCAGGTGCACCTTaGTGTGGTAGCGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KQTGGAGRVSVSFLQIQNPPGAP*CGSASS
Trigger: GCTGGAAGCGCTACCACATCAAGGTGCACCTGGCGG...ATTTTGGATCTGGAGAAAGCTCACACTGACTCTTCCTGCTCCCCCAGTCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CTGTGTGTCCCTGACAACCTCCTTGGGCCTCAGGCTACCCTCTGCAGAACAGACAATGCCCCATTTTCTTaGCAAACCCTGACGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LCVPDNLLGPQATLCRTDNAPFS*QTLTRH
Trigger: ATGCCTCGTCAGGGTTTGGCAAGAAAATGGGGCATT...GTCTGTTCTGCAGAGGGTAGCCTGAGGCCCAAGGAGGTTGTCAGGGACACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCATCTTGCGATGCCCTCTaGCTGCCCATGGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVASCDAL*LPMGAF
Trigger: GAAAGCTCCCATGGGCAGCCAGAGGGCATCGCAAGA...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCACAATCCCAGGTGTATTaGAGCTGCAGAGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLAQSQVY*SCREEV
Trigger: AACCTCTTCTCTGCAGCTCCAATACACCTGGGATTG...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GTTCAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTTCCCCGCTTAGTCATTaGAGAGTTCGGACACGACTG +
Preference number: 4 (lower is better)
Translates to: VQWIPSESEGETGSSRVLSPLSH*RVRTRL
Trigger: CAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA...AAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GGGAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCCTCAGTTTCCCAACCTaGAAAATGGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRQEKCLPKVPSTPAYSFLSFPT*KMGCRK
Trigger: CTTCCTGCAGCCCATTTTCCAGGTTGGGAAACTGAG...GAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
3UTR CAA 72 bp TCATCTCCCCTCTTTGTGTCACGAGGACCATGCACTTaGGTGCATGGTGACATTCAGTGGGGGCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSPLFVSRGPCT*VHGDIQWGLLS
Trigger: GGAAAGCAGCCCCCACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTCCCGGCACACTGCCCTaGGGGTCTCCACCCGGAATT +
Preference number: 4 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVPGTLP*GSPPGI
Trigger: AATTCCGGGTGGAGACCCTCAGGGCAGTGTGCCGGG...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAACCCAGTTAAGAAATGGGTGGTaGTTTGCATGCGATTTGCAT +
Preference number: 4 (lower is better)
Translates to: PSASTQVPLVMALPPPTQLRNGW*FACDLH
Trigger: ATGCAAATCGCATGCAAATCACCACCCATTTCTTAA...CTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CAGTGTGAGCTTTCTCCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGAAGACCCCGGGCCAAGTaGTGTCCCCGAGCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: QCELSPDPKSAACHSRPRRPRAK*CPRAKQ
Trigger: TTGCTTAGCTCGGGGACAGCACTTGGCCCGGGGTCT...TCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGGAGAAAGCTCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGGACCATGCACTTTGGTaGATGGTGACATTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EAGEVPSKSALYPSLFLQDHALW*MVTFSG
Trigger: CCCACTGAATGTCACCATGCACCAAAGTGCATGGTC...CTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CTCCCCTCTTTGTGTCACGAGGACCATGCACTTTGGTGCATGGTGACATTCAGTGGGCAAAGGTGTGGCTaGGAAAATGTCCTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LPSLCHEDHALWCMVTFSGQRCG*ENVLGK
Trigger: CTTGCCCAGGACATTTTCCCAGCCACACCTTTGCCC...ACTGAATGTCACCATGCACCAAAGTGCATGGTCCTCGTGACACAAAGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGTCTGAGAAGACTTCCTaGAGGAGACTGCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSRSEKTS*RRLQSQ
Trigger: CTGGGATTGCAGTCTCCTCCAGGAAGTCTTCTCAGA...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGACAGAGGGGACCCAGGCTCTAGATACACGCATGTGGCCCAGCTGTTAGCATCGAGGCTTAAGAAATaGGTGGTGATTTGCATGCGA +
Preference number: 4 (lower is better)
Translates to: EDRGDPGSRYTHVAQLLASRLKK*VVICMR
Trigger: TCGCATGCAAATCACCACCCATTTCTTAAGCCTCGA...TGCTAACAGCTGGGCCACATGCGTGTATCTAGAGCCTGGGTCCCCTCTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGTCCCAACCTGGAAAATaGGCTGCAGGAAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: SAFQKCPLPQPIPSASTQSQPGK*AAGSHF
Trigger: AAAGTGGCTTCCTGCAGCCCATTTTCCAGGTTGGGA...CTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGGTCGTAACCTCTGACTCCTaGGTTCAAGCGATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AFQKCPLPQPIPSASTQVVTSDS*VQAILL
Trigger: CAAGAGAATCGCTTGAACCCAGGAGTCAGAGGTTAC...GACCTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR CCA 90 bp GACTCCTGGGTTCAAGCGATTCTCTTGGAACTTGGCTGTTTTCTGCCACCTGGACAGGCTGGAGTGCAATaGCGTGATTTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DSWVQAILLELGCFLPPGQAGVQ*RDFGSL
Trigger: CAGTGAGCCGAAATCACGCCATTGCACTCCAGCCTG...TCCAGGTGGCAGAAAACAGCCAAGTTCCAAGAGAATCGCTTGAACCCAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR TCA 90 bp AAACAGACTGGGGGAGCAGGAAGAGTCAGTGTGAGCTTTCTCCAGATCCAAAATATGGTCTCCATCTCCTaGCCTCATGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KQTGGAGRVSVSFLQIQNMVSIS*PHDPPA
Trigger: GGCAGGCGGATCATGAGGTCAGGAGATGGAGACCAT...ATTTTGGATCTGGAGAAAGCTCACACTGACTCTTCCTGCTCCCCCAGTCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp GTTCCCCTTGGCCCTGTCAAGCCTATCAGGCCTGGAGCTTCCTCAAAGCAGCTCGAGGTCTTGGACAAATaGTGTGAAGGAAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: VPLGPVKPIRPGASSKQLEVLDK*CEGRRE
Trigger: TTCTCTTCTTCCTTCACATCATTTGTCCAAGACCTC...GAGCTGCTTTGAGGAAGCTCCAGGCCTGATAGGCTTGACAGGGCCAAGGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTGAGCAGGTGTATTGGAGCTaGAGAGAAGAGGTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: QWIPSESEGETGSSRVLEQVYWS*REEVEK
Trigger: CTTTTCAACCTCTTCTCTGCAGCTCCAATACACCTG...CTCAAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AGCAGTGTGCATCAGCTGGTCAGGCCAGGGTTTCATGGTCCACCTGGGAGCCCAGCAGGAAGCCACTTTTaGAACTTATGTTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: SSVHQLVRPGFHGPPGSPAGSHF*NLCLSQ
Trigger: CTGAGATAAACATAAGTTGCAAAAGTGGCTTCCTGC...TGGGCTCCCAGGTGGACCATGAAACCCTGGCCTGACCAGCTGATGCACACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATGGGCCTGCCGGAGTGAAGTaGGGCTCCTCTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VQHYYFRTCQRCRGLRNGPAGVK*GSSLFP
Trigger: GGGGAAGAGAGAGGAGCCCCACTTCACTCCGGCAGG...CCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCACACACAGTGGGTCTCTaGGGACAAAGTCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVAHTVGL*GQSPGL
Trigger: TAACCCAGGACTTTGTCCCCAGAGACCCACTGTGTG...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp ACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCAGGGAGGACCATGCACTTTaGTGCATGGTGACATTCAGT +
Preference number: 4 (lower is better)
Translates to: TKWRDCGPNSGIHGWSSREDHAL*CMVTFS
Trigger: ACTGAATGTCACCATGCACCAAAGTGCATGGTCCTC...CCTGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGGATTCTCTTGGAACTTaGCTGTTTTCTGCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EAGEVPSKSALYPSLFLQDSLGT*LFSATW
Trigger: CCAGGTGGCAGAAAACAGCCAAGTTCCAAGAGAATC...CTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR GCA 90 bp AAACAGACTGGGGGAGCAGGAAGAGTCAGTGTGAGCTTTCTCCAGATCCAAAATGGGAGGCAGGAGAAGTaGCTTCCAAAAGTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KQTGGAGRVSVSFLQIQNGRQEK*LPKVPS
Trigger: AGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTCCC...ATTTTGGATCTGGAGAAAGCTCACACTGACTCTTCCTGCTCCCCCAGTCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCACTTCCTGGAGGAGACTaGAATCCCAGGTGTATTGGA +
Preference number: 4 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVALPGGD*NPRCIG
Trigger: TCCAATACACCTGGGATTGCAGTCTCCTCCAGGAAG...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp CAGTGGATCCCGAGTGAGTCAGAAGGTGAGACTGGAAGCAGCAGGGTCCTTGAGTTGAAGGATAAGCAATaGCTGCATGAAGTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QWIPSESEGETGSSRVLELKDKQ*LHEVAG
Trigger: ACCTGCTACTTCATGCAGCCATTGCTTATCCTTCAA...CTCAAGGACCCTGCTGCTTCCAGTCTCACCTTCTGACTCACTCGGGATCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp GTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATGGGGTCACACAGCAGAGCTaGAAGGCTCAAGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VQHYYFRTCQRCRGLRNGVTQQS*KAQGSL
Trigger: GAGGGAGCCTTGAGCCTTTCAGCTCTGCTGTGTGAC...CCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp AAACAGACTGGGGGAGCAGGAAGAGTCAGTGTGAGCTTTCTCCAGATCCAAAATTCCAAGGTGGCACAGTaGTTTCCACTGAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: KQTGGAGRVSVSFLQIQNSKVAQ*FPLKTG
Trigger: CCCTGTCTTCAGTGGAAAGCACTGTGCCACCTTGGA...ATTTTGGATCTGGAGAAAGCTCACACTGACTCTTCCTGCTCCCCCAGTCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTCTGTCCCCGTGGTGGTaGTTTACTATCCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVLSPWW*FTIHLS
Trigger: GGACAGGTGGATAGTAAATCACCACCACGGGGACAG...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp GTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGGCTTAAGAAATGGGGTGTCTGAAGCAGTGTaGATCAGCTGGTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VQHYYFRTCQRCRGLRNGVSEAV*ISWSGQ
Trigger: CTGGCCTGACCAGCTGATGCACACTGCTTCAGACAC...CCCATTTCTTAAGCCTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR GCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTGTGTCACGAGGACCATaGACTTTGGTGCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVVSRGP*TLVHGD
Trigger: GTCACCATGCACCAAAGTGCATGGTCCTCGTGACAC...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CCA 90 bp GACTCCTGGGTTCAAGCGATTCTCTTGGAACTTGGCTGTTTTCTGCCACCTGGATTCAAGCGATTCTCTTaGAACTTGGCTGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: DSWVQAILLELGCFLPPGFKRFS*NLAVFC
Trigger: GCAGAAAACAGCCAAGTTCCAAGAGAATCGCTTGAA...TCCAGGTGGCAGAAAACAGCCAAGTTCCAAGAGAATCGCTTGAACCCAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS-3UTR TCA 90 bp TCATCAAGGGACAGGTCCAACATTATTATTTCAGAACATGCCAGCGCTGTCGAGCAGGAAGAGTCAGTGTaGGCTTTCTCCAGATCCAAA +
Preference number: 4 (lower is better)
Translates to: SSRDRSNIIISEHASAVEQEESV*AFSRSK
Trigger: TTTGGATCTGGAGAAAGCTCACACTGACTCTTCCTG...CTCGACAGCGCTGGCATGTTCTGAAATAATAATGTTGGACCTGTCCCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTTTGAAGCTAGGGCTTTaGAGGATGAATAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVLKLGL*RMNRSL
Trigger: CAAGCTCCTATTCATCCTTCAAAGCCCTAGCTTCAA...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR TCA 90 bp CCAGATCCAAAATCAGCAGCCTGTCATTCAAGGCCAAGACATTCCACAATAGTTAATGTCAAAACACCCTaGAAATGCTTTCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: PDPKSAACHSRPRHSTIVNVKTP*KCFLPP
Trigger: AGGTGGGAGAAAGCATTTTCAGGGTGTTTTGACATT...AACTATTGTGGAATGTCTTGGCCTTGAATGACAGGCTGCTGATTTTGGATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS GCA 90 bp TGCGCCTCGCTGGGGTCGCTGACGAGCAGCAGCACCGAGCCGTCCTaGAGGCGCGCGTCGCGCACCGTCTGGTGGTCGTCCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: CASLGSLTSSSTEPS*RRASRTVWWSSSRR
Trigger: GCGGCGGCTGGACGACCACCAGACGGTGCGCGACGCGCGCCTGCAGGACGGCTCGGTGCTGCTGCTCGTCAGCGACCCCAGCGAGGCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646160.1
CDS GCA 90 bp CCAGACTACCTGGGGTCGCTGACGAGCAGCAGCACCGAGCCGTCCTaGAGGCGCGCGTCGCGCACCGTCTGGTGGTCGTCCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PDYLGSLTSSSTEPS*RRASRTVWWSSSRR
Trigger: GCGGCGGCTGGACGACCACCAGACGGTGCGCGACGCGCGCCTGCAGGACGGCTCGGTGCTGCTGCTCGTCAGCGACCCCAGGTAGTCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS TCA 90 bp GCACGGTCAGCGGTAGCAGCAGCGCCTCGTCCGCCAGGTGCACCTTaGTGTGGTAGCGCTTCCAGCGCGACAGCCCCCGCCGCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: ARSAVAAAPRPPGAP*CGSASSATAPAAAP
Trigger: AGGGGCTGCGGCGGGGGCTGTCGCGCTGGAAGCGCTACCACATCAAGGTGCACCTGGCGGACGAGGCGCTGCTGCTACCGCTGACCGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000646160.1
CDS TCA 90 bp GCCTACCGGGGGCCGGGTTGGGAGGCTCTGGAGACCCTCGACCCTTaGGGAAGCCCCCATTCCAGCCTCCACCTGCGCCTCCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AYRGPGWEALETLDP*GSPHSSLHLRLQGL
Trigger: GAGGCCCTGGAGGCGCAGGTGGAGGCTGGAATGGGGGCTTCCTCAAGGGTCGAGGGTCTCCAGAGCCTCCCAACCCGGCCCCCGGTAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CCA 90 bp TCCAGCCTCCACCTGCGCCTCCAGGGCCTCCCACAAAGGTGGTGTTaGGCCCGTGGGGGAAACGCTGGGCGGGCAGAGAGATGGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSLHLRLQGLPQRWC*ARGGNAGRAERWGL
Trigger: AAGCCCCCATCTCTCTGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGGCGCAGGTGGAGGCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CCA 90 bp CCCCATTCCAGCCTCCACCTGCGCCTCCAGGGCCTCCCACAAAGGTaGTGTTGGGCCCGTGGGGGAAACGCTGGGCGGGCAGAGAGATGG +
Preference number: 5 (lower is better)
Translates to: PHSSLHLRLQGLPQR*CWARGGNAGRAERW
Trigger: CCATCTCTCTGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGGCGCAGGTGGAGGCTGGAATGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS-3UTR CAA 90 bp GGCGCCTCCGCCCATGGTGCCTGGAGAGTGTACACGGCCCTCGAGGACATGCGTCAGAGGGTGGTGACCTaGGGCAAGCCAAAAGCCATC +
Preference number: 5 (lower is better)
Translates to: GASAHGAWRVYTALEDMRQRVVT*GKPKAI
Trigger: GATGGCTTTTGGCTTGCCCAAGGTCACCACCCTCTG...ACGCATGTCCTCGAGGGCCGTGTACACTCTCCAGGCACCATGGGCGGAGGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCATCTGTGCTTCTCTTCTaGCGATGCCCTCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPSVLLF*RCPLAA
Trigger: GGCAGCCAGAGGGCATCGCAAGAAGAGAAGCACAGA...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS GCA 90 bp AGCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTaGCTCCTCCAACCCAGACTACCTGGGGTCGCTGACGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLFLQPVPRSPWSWL*LLQPRLPGVADEQQ
Trigger: CTGCTGCTCGTCAGCGACCCCAGGTAGTCTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR CAA 90 bp CAGGGACTGGGGCTCCAGCAGGAGTGTCTGAAGCAGTGTGCATCAGCTGGTCAGAGTACCCAGGTCCCCTaGGTCATGGCTCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: QGLGLQQECLKQCASAGQSTQVP*VMALPP
Trigger: AGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACT...CTGACCAGCTGATGCACACTGCTTCAGACACTCCTGCTGGAGCCCCAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp TTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAACCCAGTACCCAGGTCCCCTaGGTCATGGCTCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: FLQPVPRSPWSWLCLLQPSTQVP*VMALPP
Trigger: AGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACT...GGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS-3UTR CAA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCAAAATGTCCTAGGTCCTaGTCAGGGACTGGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPKCPRS*SGTGAP
Trigger: TGGAGCCCCAGTCCCTGACAAGGACCTAGGACATTT...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp TCCCCGCTTAGTCATTGGAGAGTTCGGACACGACTGGCTGCACCCCCAGCCAGGGCAATCCCAGGTGTATaGGAGCTGCAGAGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: SPLSHWRVRTRLAAPPARAIPGV*ELQRRG
Trigger: ACCTCTTCTCTGCAGCTCCAATACACCTGGGATTGC...CCTGGCTGGGGGTGCAGCCAGTCGTGTCCGAACTCTCCAATGACTAAGCGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp GAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGAGCTCCCGGCATGGGTaGGGGACGCCTCAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: EAGEVPSKSALYPSLFLQSSRHG*GTPQFR
Trigger: TCTGAACTGAGGCGTCCCCAACCCATGCCGGGAGCT...CTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp CCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAACCCAGTGTCATCTCCCCTCTTaGTGTCACGAGGACCATGCA +
Preference number: 5 (lower is better)
Translates to: PSASTQVPLVMALPPPTQCHLPS*CHEDHA
Trigger: TGCATGGTCCTCGTGACACAAAGAGGGGAGATGACA...CTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS CCA 90 bp TACCCCAGCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATaGCTCTGCCTCCTCCAACCCAGACTACCTGAAAGAGGGAGACAG +
Preference number: 5 (lower is better)
Translates to: YPSLFLQPVPRSPWS*LCLLQPRLPERGRQ
Trigger: CTGTCTCCCTCTTTCAGGTAGTCTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGCTGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590789.1
CDS-3UTR CAA 90 bp AAACAGACTGGGGGAGCAGGAAGAGTCAGTGTGAGCTTTCTCCAGATCCAAAATGGCAGGGGGCACGGCTaGGGCAAAGGTGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: KQTGGAGRVSVSFLQIQNGRGHG*GKGVAG
Trigger: CCCAGCCACACCTTTGCCCAAGCCGTGCCCCCTGCC...ATTTTGGATCTGGAGAAAGCTCACACTGACTCTTCCTGCTCCCCCAGTCTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp GCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTACCCAGGTCGAAGCAGCAGGGTCCTaGAGGGAAGTAGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: AFQKCPLPQPIPSASTQVEAAGS*REVGSP
Trigger: AGGAGAGCCTACTTCCCTCAAGGACCCTGCTGCTTC...GACCTGGGTACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp GAGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGTCAGCCAAGCGGGAATaGCAGGGTAGATGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: EAGEVPSKSALYPSLFLQSAKRE*QGRCPK
Trigger: CTTCGGGCATCTACCCTGCAATTCCCGCTTGGCTGA...CTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp TTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCAACCCAAATGCCCCATTTTCTaGCCAAACCCTGACGAGGCA +
Preference number: 5 (lower is better)
Translates to: FLQPVPRSPWSWLCLLQPKCPIF*PNPDEA
Trigger: TGCCTCGTCAGGGTTTGGCAAGAAAATGGGGCATTT...GGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp GCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTGCCTCCTCCCGATTCTCTTGGAACTaGGCTGTTTTCTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: AYSFSQYPGPLGHGSASSRFSWN*AVFCHL
Trigger: CAGGTGGCAGAAAACAGCCAAGTTCCAAGAGAATCG...GGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587632.1
CDS GCA 90 bp AGCCTATTCCTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTaGCTCCTCCAACCCAGACTACCTGAAAGAGGGAGACAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: SLFLQPVPRSPWSWL*LLQPRLPERGRQKD
Trigger: GTCTTTCTGTCTCCCTCTTTCAGGTAGTCTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAGGAATAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590789.1
CDS-3UTR CAA 90 bp CACGGCTGTCCCCGTGGTGGTGATTTACTATCCACCTGTCCATGCTCTGAGTCCGTAGATGCCCGAAGTTaGGCAGATGCTCTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: HGCPRGGDLLSTCPCSESVDARS*ADALKG
Trigger: TCCCTTCAGAGCATCTGCCAAACTTCGGGCATCTAC...GGACTCAGAGCATGGACAGGTGGATAGTAAATCACCACCACGGGGACAGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp AGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGTGCTGCAGAGAAGAGGTaGAAAAGTGCTCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RRSAFQKCPLPQPIPSASAAEKR*KSAPGR
Trigger: CCTGCCTGGAGCACTTTTCAACCTCTTCTCTGCAGC...ACTGGCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp AGGCAGGAGAAGTGCCTTCCAAAAGTGCCCTCTACCCCAGCCTATTCCTTCAGCCAGATCCTCGTCCTCTaGGCCAGAGTTCTTCAGAAC +
Preference number: 5 (lower is better)
Translates to: RQEKCLPKVPSTPAYSFSQILVL*ARVLQN
Trigger: GTTCTGAAGAACTCTGGCCAAGAGGACGAGGATCTG...GCTGAAGGAATAGGCTGGGGTAGAGGGCACTTTTGGAAGGCACTTCTCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp TGCCCGAAGTTTGGCAGATGCTCTGAAGGGAGGCGAGCAGGAGACCCCGGGCCATGCAGGAAGCCACTTTaGCAACTTATGTTTATCTCA +
Preference number: 5 (lower is better)
Translates to: CPKFGRCSEGRRAGDPGPCRKPL*QLMFIS
Trigger: TGAGATAAACATAAGTTGCAAAAGTGGCTTCCTGCA...TGGCCCGGGGTCTCCTGCTCGCCTCCCTTCAGAGCATCTGCCAAACTTCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS-3UTR CAA 90 bp AAACCAAGTGGAGGGACTGTGGCCCAAACTCAGGGATACATGGATGGAGTAGCACGAGGACCATGCACTTaGGTGCATGGTGACATTCAG +
Preference number: 5 (lower is better)
Translates to: KPSGGTVAQTQGYMDGVARGPCT*VHGDIQ
Trigger: CTGAATGTCACCATGCACCAAAGTGCATGGTCCTCG...TGCTACTCCATCCATGTATCCCTGAGTTTGGGCCACAGTCCCTCCACTTGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448587.5
CDS CCA 72 bp GCGCGCTTCCAGGAGCTCACGCCCTGGCCCACCAGCTaGGCGCGCAGGTCGCTGAGCGTGTCCCGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: ARFQELTPWPTS*ARRSLSVSRGR
Trigger: GCGGCCGCGGGACACGCTCAGCGACCTGCGCGCCCAGCTGGTGGGCCAGGGCGTGAGCTCCTGGAAGCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000646160.1
CDS TCA 72 bp TCACGCCCTGGCCCACCAGCTGGGCGCGCAGGTCGCTaGGCGTGTCCCGCGGCCGCACGGTCAGCGGTAGCA +
Preference number: 6 (lower is better)
Translates to: SRPGPPAGRAGR*ACPAAARSAVA
Trigger: TGCTACCGCTGACCGTGCGGCCGCGGGACACGCTCAGCGACCTGCGCGCCCAGCTGGTGGGCCAGGGCGTGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000646160.1
CDS GCA 72 bp CTGGGGTCGCTGACGAGCAGCAGCACCGAGCCGTCCTaGAGGCGCGCGTCGCGCACCGTCTGGTGGTCGTCC +
Preference number: 6 (lower is better)
Translates to: LGSLTSSSTEPS*RRASRTVWWSS
Trigger: GGACGACCACCAGACGGTGCGCGACGCGCGCCTGCAGGACGGCTCGGTGCTGCTGCTCGTCAGCGACCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448587.5
ENST00000587632.1
ENST00000646160.1
CDS TCA 72 bp GCGGTAGCAGCAGCGCCTCGTCCGCCAGGTGCACCTTaGTGTGGTAGCGCTTCCAGCGCGACAGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: AVAAAPRPPGAP*CGSASSATAPA
Trigger: GGCGGGGGCTGTCGCGCTGGAAGCGCTACCACATCAAGGTGCACCTGGCGGACGAGGCGCTGCTGCTACCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000646160.1
CDS CCA 72 bp AGCCTCCACCTGCGCCTCCAGGGCCTCCCACAAAGGTaGTGTTGGGCCCGTGGGGGAAACGCTGGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: SLHLRLQGLPQR*CWARGGNAGRA
Trigger: TGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGGCGCAGGTGGAGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CAA 72 bp CCACCTGCGCCTCCAGGGCCTCCCACAAAGGTGGTGTaGGGCCCGTGGGGGAAACGCTGGGCGGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: PPAPPGPPTKVV*GPWGKRWAGRE
Trigger: CTCTCTGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGGCGCAGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CAA 90 bp TTCCAGCCTCCACCTGCGCCTCCAGGGCCTCCCACAAAGGTGGTGTaGGGCCCGTGGGGGAAACGCTGGGCGGGCAGAGAGATGGGGGCT +
Preference number: 6 (lower is better)
Translates to: FQPPPAPPGPPTKVV*GPWGKRWAGREMGA
Trigger: AGCCCCCATCTCTCTGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGGCGCAGGTGGAGGCTGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS TCA 72 bp GGGCCGGGTTGGGAGGCTCTGGAGACCCTCGACCCTTaGGGAAGCCCCCATTCCAGCCTCCACCTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: GPGWEALETLDP*GSPHSSLHLRL
Trigger: GAGGCGCAGGTGGAGGCTGGAATGGGGGCTTCCTCAAGGGTCGAGGGTCTCCAGAGCCTCCCAACCCGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CCA 72 bp CCTCCAGGGCCTCCCACAAAGGTGGTGTTGGGCCCGTaGGGGAAACGCTGGGCGGGCAGAGAGATGGGGGCT +
Preference number: 6 (lower is better)
Translates to: PPGPPTKVVLGP*GKRWAGREMGA
Trigger: AGCCCCCATCTCTCTGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CCA 72 bp CACCTGCGCCTCCAGGGCCTCCCACAAAGGTGGTGTTaGGCCCGTGGGGGAAACGCTGGGCGGGCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: HLRLQGLPQRWC*ARGGNAGRAER
Trigger: TCTCTCTGCCCGCCCAGCGTTTCCCCCACGGGCCCAACACCACCTTTGTGGGAGGCCCTGGAGGCGCAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CCA 72 bp GGGCCTTCGCCTACCGGGGGCCGGGTTGGGAGGCTCTaGAGACCCTCGACCCTTGAGGAAGCCCCCATTCCA +
Preference number: 6 (lower is better)
Translates to: GPSPTGGRVGRL*RPSTLEEAPIP
Trigger: TGGAATGGGGGCTTCCTCAAGGGTCGAGGGTCTCCAGAGCCTCCCAACCCGGCCCCCGGTAGGCGAAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CAA 72 bp AGACACAACCAGGGCCTTCGCCTACCGGGGGCCGGGTaGGGAGGCTCTGGAGACCCTCGACCCTTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RHNQGLRLPGAG*GGSGDPRPLRK
Trigger: CTTCCTCAAGGGTCGAGGGTCTCCAGAGCCTCCCAACCCGGCCCCCGGTAGGCGAAGGCCCTGGTTGTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS CAA 90 bp GAGAAGCACAGACACAACCAGGGCCTTCGCCTACCGGGGGCCGGGTaGGGAGGCTCTGGAGACCCTCGACCCTTGAGGAAGCCCCCATTC +
Preference number: 6 (lower is better)
Translates to: EKHRHNQGLRLPGAG*GGSGDPRPLRKPPF
Trigger: GAATGGGGGCTTCCTCAAGGGTCGAGGGTCTCCAGAGCCTCCCAACCCGGCCCCCGGTAGGCGAAGGCCCTGGTTGTGTCTGTGCTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646675.1
CDS GCA 72 bp CTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTaGCTCCTCCAACCCAGACTACCTGGGGTCGCTGAC +
Preference number: 6 (lower is better)
Translates to: LQPVPRSPWSWL*LLQPRLPGVAD
Trigger: GTCAGCGACCCCAGGTAGTCTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448587.5
ENST00000587632.1
CDS GCA 72 bp CTTCAGCCAGTACCCAGGTCCCCTTGGTCATGGCTCTaGCTCCTCCAACCCAGACTACCTGAAAGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: LQPVPRSPWSWL*LLQPRLPERGR
Trigger: TCTCCCTCTTTCAGGTAGTCTGGGTTGGAGGAGGCAGAGCCATGACCAAGGGGACCTGGGTACTGGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590789.1