RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TINAGL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000142910

Ensembl transcript IDs: ENST00000271064.12, ENST00000457433.6, ENST00000461030.5, ENST00000463112.1, ENST00000466998.1, ENST00000468635.5, ENST00000478398.5, ENST00000480586.1, ENST00000481165.5, ENST00000498429.5, ENST00000537531.2

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCCGCCGGCCCTTAGCCTaGATCCCAGGCCGGACCCCG +
Preference number: 2 (lower is better)
Translates to: GRCVSGTRAGISALAPACRRPLA*IPGRTP
Trigger: CGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCG...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR-3UTR CCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGGGTCACCGCCCCATTaGGGCCTCTTCCGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: RCVSGTRAGISALAPACAGSPPH*GLFRRP
Trigger: GGGCCGGCGGAAGAGGCCCCAATGGGGCGGTGACCC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCGGGTCACCGCCCCATTaGGGCCTCTTCCGCCGGCCC +
Preference number: 2 (lower is better)
Translates to: PVPTGRSGGSASLACPRLGSPPH*GLFRRP
Trigger: GGGCCGGCGGAAGAGGCCCCAATGGGGCGGTGACCC...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGTCTGTCGGGCGAGGCTaGGGTCACCGCCCCATTGGG +
Preference number: 2 (lower is better)
Translates to: CVSGTRAGISALAPACAPSVGRG*GHRPIG
Trigger: CCCAATGGGGCGGTGACCCCAGCCTCGCCCGACAGA...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCGCCGGCCCTTAGCCTaGATCCCAGGCCGGACCCCG +
Preference number: 2 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIRRPLA*IPGRTP
Trigger: CGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCCCCACTGGGAGGTCTaGGGGCTCCGCCAGTCTCGC +
Preference number: 2 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIPHWEV*GLRQSR
Trigger: GCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR GCA 72 bp CCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGCGCTaGGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTG +
Preference number: 3 (lower is better)
Translates to: PVSPARGSQAGR*VSGTRAGISAL
Trigger: CAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
3UTR CCA 72 bp GGGCTCTGTCGGGCGAGGCTGGGGTCACCGCCCCATTaGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCA +
Preference number: 3 (lower is better)
Translates to: GLCRARLGSPPH*GLFRRPLAWIP
Trigger: TGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGTGACCCCAGCCTCGCCCGACAGAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGGGTCACCGCCCCATTaGGGCCTCTTCCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACGSPPH*GLFRRP
Trigger: GGGCCGGCGGAAGAGGCCCCAATGGGGCGGTGACCC...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCGGCGCCCACGACCCTaGTGGGCACCCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPRRPRP*WAPRAK
Trigger: CTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGCAGTGGCCTGGCGCTTaGCCCGACCCATGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGQWPGA*PDPWLG
Trigger: GCCGAGCCATGGGTCGGGGCAAGCGCCAGGCCACTG...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCGCCGGCCCTTAGCCTaGATCCCAGGCCGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGRRPLA*IPGRTP
Trigger: CGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCGCCGGCCCTTAGCCTaGATCCCAGGCCGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLRRPLA*IPGRTP
Trigger: CGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGGGGTCACCGCCCCATTaGGGCCTCTTCCGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRGSPPH*GLFRRP
Trigger: GGGCCGGCGGAAGAGGCCCCAATGGGGCGGTGACCC...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGCCCCACTGGGAGGTCTaGGGGCTCCGCCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGPHWEV*GLRQSR
Trigger: GCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCGGATGCCCCGCAGGTaGAGACCCGGTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACARMPRR*RPGASS
Trigger: GGAGCTAGCACCGGGTCTGCACCTGCGGGGCATCCG...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCTCCCGCGTCCCGGATaGCCCGCAGGTGCAGACCCG +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSLPRPG*PAGADP
Trigger: CGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGACCCATGTCCTCCATaGCCACGCGGCCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACDPCPP*PRGPRR
Trigger: GCGTCTGGGGCCGCGTGGGCATGGAGGACATGGGTC...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGACCCATGTCCTCCATaGCCACGCGGCCCCAGACGC +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACADPCPP*PRGPRR
Trigger: GCGTCTGGGGCCGCGTGGGCATGGAGGACATGGGTC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGCGCCCACGACCCTGCTaGGCACCCAGAGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGRPRPC*APRAKW
Trigger: CCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCG...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCCACAGGTCCTGCTCCTaGCAGTACCGGCCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACHRSCS*QYRPPA
Trigger: CGCGGGAGGCCGGTACTGCCAGGAGCAGGACCTGTG...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCAGTGGGCAGTGGCCTaGCGCTTGCCCCGACCCATG +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPQWAVA*RLPRPM
Trigger: CATGGGTCGGGGCAAGCGCCAGGCCACTGCCCACTG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCCAGTGGGCAGTGGCCTaGCGCTTGCCCCGACCCATG +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACQWAVA*RLPRPM
Trigger: CATGGGTCGGGGCAAGCGCCAGGCCACTGCCCACTG...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCGCACGATGCGGAAGTaGCCCCTCTCGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPRTMRK*PLSPQA
Trigger: AGCCTGGGGCGAGAGGGGCCACTTCCGCATCGTGCG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCGCACGATGCGGAAGTaGCCCCTCTCGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACARTMRK*PLSPQA
Trigger: AGCCTGGGGCGAGAGGGGCCACTTCCGCATCGTGCG...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCGCCGGCCCTTAGCCTaGATCCCAGGCCGGACCCCG +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSRRPLA*IPGRTP
Trigger: CGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCTCTGTCGGGCGAGGCTaGGGTCACCGCCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACSVGRG*GHRPIG
Trigger: CCCAATGGGGCGGTGACCCCAGCCTCGCCCGACAGA...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCCCACTGGGAGGTCTaGGGGCTCCGCCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLPHWEV*GLRQSR
Trigger: GCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGGCAGGTGGACCGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACGRWTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCGGTCCACCTGCC...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGGCAGGTGGACCGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAGRWTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCGGTCCACCTGCC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCTCCCGCGTCCCGGATaGCCCGCAGGTGCAGACCCG +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPALPRPG*PAGADP
Trigger: CGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCCGCGGCAGCCCTGCTaGTGGTGGGTGTCACAAGAC +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPPRQPC*WWVSQD
Trigger: GTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCGGCAGCCCTGCTaGTGGTGGGTGTCACAAGAC +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAPRQPC*WWVSQD
Trigger: GTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGG...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCACCGCGGCAGCCCTaGTGCTGGTGGGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAPPRQP*CWWVSQ
Trigger: TTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGG...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGCACCCAGAGCCAAGTaGCCAGCCAGCGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAAPRAK*PASGSN
Trigger: GTTGCTGCCGCTGGCTGGCCACTTGGCTCTGGGTGC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCAGTGGGCAGTGGCCTaGCGCTTGCCCCGACCCATG +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLQWAVA*RLPRPM
Trigger: CATGGGTCGGGGCAAGCGCCAGGCCACTGCCCACTG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCGCACGATGCGGAAGTaGCCCCTCTCGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLRTMRK*PLSPQA
Trigger: AGCCTGGGGCGAGAGGGGCCACTTCCGCATCGTGCG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCCCCACTGGGAGGTCTaGGGGCTCCGCCAGTCTCGC +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSPHWEV*GLRQSR
Trigger: GCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGGGGCGCCAGAGGCCTaGGATCTGCAGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACGAPEA*DLQLCS
Trigger: AGAGCACAGCTGCAGATCCCAGGCCTCTGGCGCCCC...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCTCCGCCTCCTGGCTCTaGGACCGCCGGACGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGSASWL*DRRTLK
Trigger: TTTGAGCGTCCGGCGGTCGCAGAGCCAGGAGGCGGA...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCTCCGCCTCCTGGCTCTaGGACCGCCGGACGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLSASWL*DRRTLK
Trigger: TTTGAGCGTCCGGCGGTCGCAGAGCCAGGAGGCGGA...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCGGCGCCCACGACCCTaGTGGGCACCCAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPARRPRP*WAPRAK
Trigger: CTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGCAGCACAGGTCCTaGTCCTGGCAGTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRRQHRS*SWQYRP
Trigger: AGGCCGGTACTGCCAGGAGCAGGACCTGTGCTGCCG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCACCGCGGCAGCCCTaGTGCTGGTGGGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLPPRQP*CWWVSQ
Trigger: TTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGGCCCTGATGGGCCACTaGACTCCAACCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPALMGH*TPTWAT
Trigger: CGTTGCCCAGGTTGGAGTGCAGTGGCCCATCAGGGC...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGCACCCAGAGCCAAGTaGCCAGCCAGCGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGAPRAK*PASGSN
Trigger: GTTGCTGCCGCTGGCTGGCCACTTGGCTCTGGGTGC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCATGACCGAGGAAGATaGGCGGATGGTGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAHDRGR*ADGAQA
Trigger: CGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATG...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCAGGCCTCGAAGGCTGTaGGAAGCACCTCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACRPRRL*EAPPLG
Trigger: ACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCT...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCCGGCGGTATCTCTCTaGCCTCCCAAGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPPAVSL*PPKAHW
Trigger: CCAGTGAGCCTTGGGAGGCCAGAGAGATACCGCCGG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCTCCTGTGATCTTGACTaGGTGGGTCCCATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACSCDLD*VGPMPA
Trigger: CGCCGGCATGGGACCCACTCAGTCAAGATCACAGGA...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGATGTCGCACTCATTaGCGCCGCGCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRRCRTH*RRARCG
Trigger: TCCGCATCGTGCGCGGCGTCAATGAGTGCGACATCG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCGGCAGCACAGGTCCTaGTCCTGGCAGTACCGGCCT +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSRQHRS*SWQYRP
Trigger: AGGCCGGTACTGCCAGGAGCAGGACCTGTGCTGCCG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCTCATCCAGGGTCATaGCCCAGAAGGCGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAPHPGS*PRRRCG
Trigger: ACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGG...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGAAGATGGGCGGATGGTaGCCAGGCGGTAGCGAATGC +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGKMGGW*PGGSEC
Trigger: GCATTCGCTACCGCCTGGGCACCATCCGCCCATCTT...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGAAGATGGGCGGATGGTaGCCAGGCGGTAGCGAATGC +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPKMGGW*PGGSEC
Trigger: GCATTCGCTACCGCCTGGGCACCATCCGCCCATCTT...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCCGCGGCAGCCCTGCTaGTGGTGGGTGTCACAAGAC +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSPRQPC*WWVSQD
Trigger: GTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCAGTGGCCTGGCGCTTaGCCCGACCCATGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDQWPGA*PDPWLG
Trigger: GCCGAGCCATGGGTCGGGGCAAGCGCCAGGCCACTG...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCACTGAGTGGGTCCCATaGCGGCGGTATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACTEWVP*RRYLSG
Trigger: GCCAGAGAGATACCGCCGGCATGGGACCCACTCAGT...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGCCCTGATGGGCCACTaGACTCCAACCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGALMGH*TPTWAT
Trigger: CGTTGCCCAGGTTGGAGTGCAGTGGCCCATCAGGGC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCACATGGTGGCTCCTaGGCCCTGGTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRPHGGS*ALVKVW
Trigger: CCACACCTTCACCAGGGCCCAGGAGCCACCATGTGG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCACAGGTCCTGCTCCTaGCAGTACCGGCCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAHRSCS*QYRPPA
Trigger: CGCGGGAGGCCGGTACTGCCAGGAGCAGGACCTGTG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGGGTCACAGTAACAGATaGCGCCCAGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPGHSNR*RPGRAG
Trigger: CCCTGCCCTACCTGGGCGCCATCTGTTACTGTGACC...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCCCCAGAAGGCGCTGTaGTTCCCAGCCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSPQKAL*FPACQP
Trigger: TGGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGAGGAAGATGGGCGGATaGTGCCCAGGCGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPRKMGG*CPGGSE
Trigger: TTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCT...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCAGGCCTCGAAGGCTGTaGGAAGCACCTCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLRPRRL*EAPPLG
Trigger: ACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCT...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCAAGACAGCAGGTTCTaGGGCGACAGGACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPQDSRF*GDRTGV
Trigger: GACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCGGCAGCCCTGCTGCTaGTGGGTGTCACAAGACAGC +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLRQPCC*WVSQDS
Trigger: GCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCGGCAGCCCTGCTGCTaGTGGGTGTCACAAGACAGC +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGRQPCC*WVSQDS
Trigger: GCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGCAGCCCTGCTGCTaGTGGGTGTCACAAGACAGC +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRRQPCC*WVSQDS
Trigger: GCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCCGGCGGTATCTCTCTaGCCTCCCAAGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGPAVSL*PPKAHW
Trigger: CCAGTGAGCCTTGGGAGGCCAGAGAGATACCGCCGG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGAGCGTCCTTCCATCTaGCAGCGTCTCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACERPSI*QRLLSP
Trigger: TGGGGAGAGGAGACGCTGCCAGATGGAAGGACGCTC...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCGGGGCGCCAGAGGCCTaGGATCTGCAGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSGAPEA*DLQLCS
Trigger: AGAGCACAGCTGCAGATCCCAGGCCTCTGGCGCCCC...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCTTTGGTAGTCTTGAGTaGGGGCGCCAGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAFGSLE*GRQRPG
Trigger: CCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAA...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCCCCAGAAGGCGCTGTaGTTCCCAGCCTGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGPQKAL*FPACQQ
Trigger: TTGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457433.6
CDS-3UTR TCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCCTCATGCACCTCCATaGGGGCTTGGACAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGPHAPP*GLGQGH
Trigger: ATGGCCCTGTCCAAGCCCTCATGGAGGTGCATGAGG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCTCCTGTGATCTTGACTaGGTGGGTCCCATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLSCDLD*VGPMPA
Trigger: CGCCGGCATGGGACCCACTCAGTCAAGATCACAGGA...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGGGCAGGTGGACCGCTTaGGCCCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAGRWTA*AQEFET
Trigger: GGTCTCGAACTCCTGGGCTCAAGCGGTCCACCTGCC...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCAGCAGTCGGAGACCGTaGGGTTGCAGAAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACSSRRP*GCRRGH
Trigger: GTGACCTCTTCTGCAACCGCACGGTCTCCGACTGCT...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCCTCATCCAGGGTCATaGCCCAGAAGGCGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGPHPGS*PRRRCG
Trigger: ACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCAGGCGGTAGCGAATaGCCTCATCCAGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRPGGSE*PHPGSC
Trigger: GCATGACCCTGGATGAGGGCATTCGCTACCGCCTGG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGAAGGCCCAGGAGCCTaGACAGTTGCCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAEGPGA*TVALVK
Trigger: CTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGATCGGATGCCACAGCTaGTGTGGAGAAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGIGCHS*CGEGPG
Trigger: TCCTGGGCCTTCTCCACAGCAGCTGTGGCATCCGAT...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCCACCGCGGCAGCCCTaGTGCTGGTGGGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAPPRQP*CWWVSQ
Trigger: TTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCACTGAGTGGGTCCCATaGCGGCGGTATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLTEWVP*RRYLSG
Trigger: GCCAGAGAGATACCGCCGGCATGGGACCCACTCAGT...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGGACATCGCCACATGGTaGCTCCTGGGCCCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRDIATW*LLGPGE
Trigger: TTCACCAGGGCCCAGGAGCCACCATGTGGCGATGTC...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGAGGAAGATGGGCGGATaGTGCCCAGGCGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRRKMGG*CPGGSE
Trigger: TTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCT...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCATGACCGAGGAAGATaGGCGGATGGTGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSHDRGR*ADGAQA
Trigger: CGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCAGGCCTCGAAGGCTGTaGGAAGCACCTCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSRPRRL*EAPPLG
Trigger: ACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCT...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCAAGACAGCAGGTTCTaGGGCGACAGGACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRQDSRF*GDRTGV
Trigger: GACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCGCTTGCCCCGACCCATaGCTCGGCTGTGCATCATAC +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLACPDP*LGCASY
Trigger: GTATGATGCACAGCCGAGCCATGGGTCGGGGCAAGC...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGAGCGTCCTTCCATCTaGCAGCGTCTCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGERPSI*QRLLSP
Trigger: TGGGGAGAGGAGACGCTGCCAGATGGAAGGACGCTC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTTCTGTCGGGCGAGGCTaGGGTCACCGCCCCATTGGG +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRSVGRG*GHRPIG
Trigger: CCCAATGGGGCGGTGACCCCAGCCTCGCCCGACAGA...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGTTTGGTAGTCTTGAGTaGGGGCGCCAGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRFGSLE*GRQRPG
Trigger: CCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAA...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCCGCAGTCCAGTATTTaGGCGTCCTTCCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPPQSSI*ASFHLA
Trigger: TGCCAGATGGAAGGACGCTCAAATACTGGACTGCGG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCGATGTCGCACTCATTaGCGCCGCGCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPARCRTH*RRARCG
Trigger: TCCGCATCGTGCGCGGCGTCAATGAGTGCGACATCG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGTGGGGCTGGAGACTTaGGGTGTCCTGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGVGLET*GVLALV
Trigger: TACCAAAGCCAGGACACCTCAAGTCTCCAGCCCCAC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGGTGGGGCTGGAGACTTaGGGTGTCCTGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRVGLET*GVLALV
Trigger: TACCAAAGCCAGGACACCTCAAGTCTCCAGCCCCAC...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCTGGTCACACTGCCACTaGCTGTTCTCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLWSHCH*LFSWQV
Trigger: CACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCA...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGTGGTCACACTGCCACTaGCTGTTCTCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRWSHCH*LFSWQV
Trigger: CACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCA...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR GCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCCAGGCGGTAGCGAATaGCCTCATCCAGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSPGGSE*PHPGSC
Trigger: GCATGACCCTGGATGAGGGCATTCGCTACCGCCTGG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGGAAGGCCCAGGAGCCTaGACAGTTGCCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPREGPGA*TVALVK
Trigger: CTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTC...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGGTGGACATCGCCACATaGTGGCTCCTGGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAVDIAT*WLLGPG
Trigger: ACCAGGGCCCAGGAGCCACCATGTGGCGATGTCCAC...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTCCCCAGAAGGCGCTGTaGTTCCCAGCCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRPQKAL*FPACQP
Trigger: TGGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGG...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCGCTTGCCCCGACCCATaGCTCGGCTGTGCATCATAC +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSACPDP*LGCASY
Trigger: GTATGATGCACAGCCGAGCCATGGGTCGGGGCAAGC...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGACCTCCATGAGGGCTTaGACAGGGCCATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPTSMRA*TGPFSI
Trigger: GATGGAGAATGGCCCTGTCCAAGCCCTCATGGAGGT...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCCGGCGGTATCTCTCTaGCCTCCCAAGGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAPAVSL*PPKAHW
Trigger: CCAGTGAGCCTTGGGAGGCCAGAGAGATACCGCCGG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGGTGATCTTGACTGAGTaGGTCCCATGCCGGCGGTAT +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGVILTE*VPCRRY
Trigger: ATACCGCCGGCATGGGACCCACTCAGTCAAGATCAC...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGGGCGCCAGAGGCCTaGGATCTGCAGCTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRGAPEA*DLQLCS
Trigger: AGAGCACAGCTGCAGATCCCAGGCCTCTGGCGCCCC...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCTCCCAGAGAATGGATTaGGACACGATCGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACSQRMD*DTIGCH
Trigger: GTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGA...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCTCCCAGAGAATGGATTaGGACACGATCGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACASQRMD*DTIGCH
Trigger: GTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGA...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGGCGGTAGACAGGAGTaGCCTGGTAGATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACGGRQE*PGRCHC
Trigger: ACAATGACATCTACCAGGTCACTCCTGTCTACCGCC...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGGCGGTAGACAGGAGTaGCCTGGTAGATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAGGRQE*PGRCHC
Trigger: ACAATGACATCTACCAGGTCACTCCTGTCTACCGCC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCCCATCAGCTCCTTCATaGTCTCCTTGTCGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRCVSGTRAGISALAPACPSAPS*SPCRWS
Trigger: GCTCCAACGACAAGGAGATCATGAAGGAGCTGATGG...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCCTCATGCACCTCCATaGGGGCTTGGACAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAPHAPP*GLGQGH
Trigger: ATGGCCCTGTCCAAGCCCTCATGGAGGTGCATGAGG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCGCAGTCCAGTATTTaGGCGTCCTTCCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRPQSSI*ASFHLA
Trigger: TGCCAGATGGAAGGACGCTCAAATACTGGACTGCGG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCCGCAGTCCAGTATTTaGGCGTCCTTCCATCTGGCA +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGPQSSI*ASFHLA
Trigger: TGCCAGATGGAAGGACGCTCAAATACTGGACTGCGG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCGATGTCGCACTCATTaGCGCCGCGCACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDRCRTH*RRARCG
Trigger: TCCGCATCGTGCGCGGCGTCAATGAGTGCGACATCG...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGAGTCGGAGGTTACAGTaGGCCCTGATGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPASRRLQ*ALMGHC
Trigger: GCAGTGGCCCATCAGGGCTCACTGTAACCTCCGACT...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCGGAGACCGTGCGGTTaGAGAAGAGGTCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGRRPCG*RRGHSN
Trigger: GTTACTGTGACCTCTTCTGCAACCGCACGGTCTCCG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGTGTTCTCCTGGCAGGTaGAACGGTTACAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPCSPGR*NGYSCP
Trigger: GGGACAACTGTAACCGTTGCACCTGCCAGGAGAACA...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGTTCTTGGTCACACTaGCACTGCCTGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGGSWSH*HCLFSW
Trigger: CCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR GCA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGAGGAAGAAGTCCTCATaGACCTCCATGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGRKKSS*TSMRAW
Trigger: CCAAGCCCTCATGGAGGTGCATGAGGACTTCTTCCT...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCACATGGTGGCTCCTaGGCCCTGGTGAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDPHGGS*ALVKVW
Trigger: CCACACCTTCACCAGGGCCCAGGAGCCACCATGTGG...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGAGGAAGATGGGCGGATaGTGCCCAGGCGGTAGCGAA +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPARKMGG*CPGGSE
Trigger: TTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCT...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTCATGACCGAGGAAGATaGGCGGATGGTGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRHDRGR*ADGAQA
Trigger: CGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATG...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCGTGATCTTGACTGAGTaGGTCCCATGCCGGCGGTAT +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLVILTE*VPCRRY
Trigger: ATACCGCCGGCATGGGACCCACTCAGTCAAGATCAC...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGGAGCGTCCTTCCATCTaGCAGCGTCTCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAERPSI*QRLLSP
Trigger: TGGGGAGAGGAGACGCTGCCAGATGGAAGGACGCTC...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCTTTCATGCATGTTCATaGCCGAGGAAGATGGGCGGA +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAFHACS*PRKMGG
Trigger: TCCGCCCATCTTCCTCGGTCATGAACATGCATGAAA...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCTGGTCAAGAGGCTCATaGATCAGGTTGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLWSRGS*IRLGHF
Trigger: GAAGTGGCCCAACCTGATTCATGAGCCTCTTGACCA...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCATCAGCTCCTTCATaGTCTCCTTGTCGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLPSAPS*SPCRWS
Trigger: GCTCCAACGACAAGGAGATCATGAAGGAGCTGATGG...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCCATCAGCTCCTTCATaGTCTCCTTGTCGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGPSAPS*SPCRWS
Trigger: GCTCCAACGACAAGGAGATCATGAAGGAGCTGATGG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTTCCTGTGATCTTGACTaGGTGGGTCCCATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRSCDLD*VGPMPA
Trigger: CGCCGGCATGGGACCCACTCAGTCAAGATCACAGGA...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTAGTCGGAGGTTACAGTaGGCCCTGATGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRSRRLQ*ALMGHC
Trigger: GCAGTGGCCCATCAGGGCTCACTGTAACCTCCGACT...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACAAGATGGGCGGATGGTaGCCAGGCGGTAGCGAATGC +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDKMGGW*PGGSEC
Trigger: GCATTCGCTACCGCCTGGGCACCATCCGCCCATCTT...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGATCGGATGCCACAGCTaGTGTGGAGAAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAIGCHS*CGEGPG
Trigger: TCCTGGGCCTTCTCCACAGCAGCTGTGGCATCCGAT...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGGCGTGTGGCTGTAGATaGCTCCCTTGTATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPACGCR*LPCIGR
Trigger: TCTTCCTATACAAGGGAGGCATCTACAGCCACACGC...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTACTGAGTGGGTCCCATaGCGGCGGTATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRTEWVP*RRYLSG
Trigger: GCCAGAGAGATACCGCCGGCATGGGACCCACTCAGT...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACGACATCGCCACATGGTaGCTCCTGGGCCCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDDIATW*LLGPGE
Trigger: TTCACCAGGGCCCAGGAGCCACCATGTGGCGATGTC...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTCACAGTAACAGATaGCGCCCAGGTAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRGHSNR*RPGRAG
Trigger: CCCTGCCCTACCTGGGCGCCATCTGTTACTGTGACC...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCACTGCCTGTTCTCCTaGCAGGTGCAACGGTTACAG +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSHCLFS*QVQRLQ
Trigger: CTGTAACCGTTGCACCTGCCAGGAGAACAGGCAGTG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR CCA 90 bp CGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCGGGAAGCACCTCCCCTaGGTTCAGCACTGTATAAAT +
Preference number: 4 (lower is better)
Translates to: RCVSGTRAGISALAPACAGKHLP*VQHCIN
Trigger: ATTTATACAGTGCTGAACCCAGGGGAGGTGCTTCCC...GGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACGCTTGCCCCGACCCATaGCTCGGCTGTGCATCATAC +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDACPDP*LGCASY
Trigger: GTATGATGCACAGCCGAGCCATGGGTCGGGGCAAGC...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCACCTCCATGAGGGCTTaGACAGGGCCATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSTSMRA*TGPFSI
Trigger: GATGGAGAATGGCCCTGTCCAAGCCCTCATGGAGGT...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCTTTCATGCATGTTCATaGCCGAGGAAGATGGGCGGA +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLFHACS*PRKMGG
Trigger: TCCGCCCATCTTCCTCGGTCATGAACATGCATGAAA...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCTTTCATGCATGTTCATaGCCGAGGAAGATGGGCGGA +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGFHACS*PRKMGG
Trigger: TCCGCCCATCTTCCTCGGTCATGAACATGCATGAAA...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCTGGTCAAGAGGCTCATaGATCAGGTTGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSWSRGS*IRLGHF
Trigger: GAAGTGGCCCAACCTGATTCATGAGCCTCTTGACCA...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCGGCGGTAGACAGGAGTaGCCTGGTAGATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSGGRQE*PGRCHC
Trigger: ACAATGACATCTACCAGGTCACTCCTGTCTACCGCC...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGTGGGGCTGGAGACTTaGGGTGTCCTGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRVGLET*GVLALV
Trigger: TACCAAAGCCAGGACACCTCAAGTCTCCAGCCCCAC...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGAAGGCCCAGGAGCCTaGACAGTTGCCTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPREGPGA*TVALVK
Trigger: CTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTC...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACATCGGATGCCACAGCTaGTGTGGAGAAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDIGCHS*CGEGPG
Trigger: TCCTGGGCCTTCTCCACAGCAGCTGTGGCATCCGAT...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGGCGTGTGGCTGTAGATaGCTCCCTTGTATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRACGCR*LPCIGR
Trigger: TCTTCCTATACAAGGGAGGCATCTACAGCCACACGC...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGAAGCACCTCCCCTaGGTTCAGCACTGTATAAAT +
Preference number: 4 (lower is better)
Translates to: PTGRSGGSASLACPRLPGGKHLP*VQHCIN
Trigger: ATTTATACAGTGCTGAACCCAGGGGAGGTGCTTCCC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGAGGAAGAAGTCCTCATaGACCTCCATGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPARKKSS*TSMRAW
Trigger: CCAAGCCCTCATGGAGGTGCATGAGGACTTCTTCCT...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGATGTGTCCCAGAGAATaGATTGAGACACGATCGGAT +
Preference number: 4 (lower is better)
Translates to: CVSGTRAGISALAPACAPMCPRE*IETRSD
Trigger: ATCCGATCGTGTCTCAATCCATTCTCTGGGACACAT...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTACCTCCATGAGGGCTTaGACAGGGCCATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRTSMRA*TGPFSI
Trigger: GATGGAGAATGGCCCTGTCCAAGCCCTCATGGAGGT...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACGTGATCTTGACTGAGTaGGTCCCATGCCGGCGGTAT +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDVILTE*VPCRRY
Trigger: ATACCGCCGGCATGGGACCCACTCAGTCAAGATCAC...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACTGTTCTCCTGGCAGGTaGAACGGTTACAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDCSPGR*NGYSCP
Trigger: GGGACAACTGTAACCGTTGCACCTGCCAGGAGAACA...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR GCA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACAGGAGCCTGCACAGTTaGCTTGGTCAAGAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDRSLHS*LGQEAH
Trigger: ATGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCT...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTAGGAGCCTGCACAGTTaGCTTGGTCAAGAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRRSLHS*LGQEAH
Trigger: ATGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCT...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCGCCCACGACCCTGCTaGGCACCCAGAGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIRPRPC*APRAKW
Trigger: CCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CCA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCATGTGTCCCAGAGAATaGATTGAGACACGATCGGAT +
Preference number: 4 (lower is better)
Translates to: PVPTGRSGGSASLACPRLMCPRE*IETRSD
Trigger: ATCCGATCGTGTCTCAATCCATTCTCTGGGACACAT...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGGTACGTTCCCAAGACTaGATAGATACGACCTCCATG +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAVRSQD*IDTTSM
Trigger: CATGGAGGTCGTATCTATCCAGTCTTGGGAACGTAC...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCGCCCTGATGGGCCACTaGACTCCAACCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIALMGH*TPTWAT
Trigger: CGTTGCCCAGGTTGGAGTGCAGTGGCCCATCAGGGC...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGATGTGTCCCAGAGAATaGATTGAGACACGATCGGAT +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAMCPRE*IETRSD
Trigger: ATCCGATCGTGTCTCAATCCATTCTCTGGGACACAT...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR TCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCAGTCGGAGGTTACAGTaGGCCCTGATGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGISRRLQ*ALMGHC
Trigger: GCAGTGGCCCATCAGGGCTCACTGTAACCTCCGACT...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCCTCATCCAGGGTCATaGCCCAGAAGGCGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIPHPGS*PRRRCG
Trigger: ACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCAAGACAGCAGGTTCTaGGGCGACAGGACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIQDSRF*GDRTGV
Trigger: GACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR GCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCAGCAGTCGGAGACCGTaGGGTTGCAGAAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGISSRRP*GCRRGH
Trigger: GTGACCTCTTCTGCAACCGCACGGTCTCCGACTGCT...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGATGCATACATCCAACTaGTGTTTGGGAAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAMHTSN*CLGSSS
Trigger: TGAAGAACTTCCCAAACAGCAGTTGGATGTATGCAT...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537531.2
CDS-3UTR GCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCGGAGACCGTGCGGTTaGAGAAGAGGTCACAGTAAC +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIRRPCG*RRGHSN
Trigger: GTTACTGTGACCTCTTCTGCAACCGCACGGTCTCCG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR GCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCGGTTCTTGGTCACACTaGCACTGCCTGTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIGSWSH*HCLFSW
Trigger: CCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACC...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCACTGCCTGTTCTCCTaGCAGGTGCAACGGTTACAG +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIHCLFS*QVQRLQ
Trigger: CTGTAACCGTTGCACCTGCCAGGAGAACAGGCAGTG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR TCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCTCCCAGAGAATGGATTaGGACACGATCGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGISQRMD*DTIGCH
Trigger: GTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGA...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCGGGAAGCACCTCCCCTaGGTTCAGCACTGTATAAAT +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIGKHLP*VQHCIN
Trigger: ATTTATACAGTGCTGAACCCAGGGGAGGTGCTTCCC...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CCA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCGTACGTTCCCAAGACTaGATAGATACGACCTCCATG +
Preference number: 4 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIVRSQD*IDTTSM
Trigger: CATGGAGGTCGTATCTATCCAGTCTTGGGAACGTAC...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGGCAGTGGCCTGGCGCTaGCCCCGACCCATGGCTCGG +
Preference number: 5 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGAVAWR*PRPMAR
Trigger: CCGAGCCATGGGTCGGGGCAAGCGCCAGGCCACTGC...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS GCA 90 bp TGCTCCTGGCAGTACCGGCCTCCCGCGTCCCGGATGCCCCGCAGGTaGAGACCCGGTGCTAGCTCCCGGCGCCCACGACCCTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: CSWQYRPPASRMPRR*RPGASSRRPRPCWA
Trigger: TGCCCAGCAGGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAGGCCGGTACTGCCAGGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 90 bp CCCCGCAGGTGCAGACCCGGTGCTAGCTCCCGGCGCCCACGACCCTaGTGGGCACCCAGAGCCAAGTGGCCAGCCAGCGGCAGCAACAGC +
Preference number: 5 (lower is better)
Translates to: PRRCRPGASSRRPRP*WAPRAKWPASGSNS
Trigger: GCTGTTGCTGCCGCTGGCTGGCCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCACCTGCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 90 bp AGCACAGGTCCTGCTCCTGGCAGTACCGGCCTCCCGCGTCCCGGATaGCCCGCAGGTGCAGACCCGGTGCTAGCTCCCGGCGCCCACGAC +
Preference number: 5 (lower is better)
Translates to: STGPAPGSTGLPRPG*PAGADPVLAPGAHD
Trigger: GTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAGGCCGGTACTGCCAGGAGCAGGACCTGTGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS-3UTR CAA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACGCAGTGGCCTGGCGCTaGCCCCGACCCATGGCTCGG +
Preference number: 5 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDAVAWR*PRPMAR
Trigger: CCGAGCCATGGGTCGGGGCAAGCGCCAGGCCACTGC...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCTGGCTTTGGTAGTCTaGAGTGGGGGCGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: CVSGTRAGISALAPACAPLALVV*SGGARG
Trigger: GCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGCTGGGCCCCAGGAGTaGGCCGCAGTCCAGTATTTG +
Preference number: 5 (lower is better)
Translates to: PTGRSGGSASLACPRLPGAGPQE*AAVQYL
Trigger: CAAATACTGGACTGCGGCCAACTCCTGGGGCCCAGC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCCTGGCTTTGGTAGTCTaGAGTGGGGGCGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PTGRSGGSASLACPRLPGLALVV*SGGARG
Trigger: GCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAG...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS CCA 90 bp CGCAGGTGCAGACCCGGTGCTAGCTCCCGGCGCCCACGACCCTGCTaGGCACCCAGAGCCAAGTGGCCAGCCAGCGGCAGCAACAGCAGT +
Preference number: 5 (lower is better)
Translates to: RRCRPGASSRRPRPC*APRAKWPASGSNSS
Trigger: ACTGCTGTTGCTGCCGCTGGCTGGCCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCACCTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS-3UTR CAA 90 bp GGGCGCTGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCTCCTTCATGATCTCCTaGTCGTTGGAGCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GRCVSGTRAGISALAPACSFMIS*SLEPRR
Trigger: CCGCCTCGGCTCCAACGACAAGGAGATCATGAAGGA...GCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCAGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGGGGCACCTCCATGAGGGCTaGGACAGGGCCATTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LGGLGAPPVSPARGSQAGHLHEG*DRAILH
Trigger: ATGGAGAATGGCCCTGTCCAAGCCCTCATGGAGGTG...CCCCGCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGCCCCATCCTGTGATCTaGACTGAGTGGGTCCCATGC +
Preference number: 5 (lower is better)
Translates to: CVSGTRAGISALAPACAPPHPVI*TEWVPC
Trigger: GCATGGGACCCACTCAGTCAAGATCACAGGATGGGG...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGGCCGCAGTCCAGTATTaGAGCGTCCTTCCATCTGGC +
Preference number: 5 (lower is better)
Translates to: CVSGTRAGISALAPACAPAAVQY*SVLPSG
Trigger: GCCAGATGGAAGGACGCTCAAATACTGGACTGCGGC...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCTCGATGTCGCACTCATaGACGCCGCGCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSSMSHS*TPRTMR
Trigger: CCGCATCGTGCGCGGCGTCAATGAGTGCGACATCGA...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS CCA 90 bp GCTAGCTCCCGGCGCCCACGACCCTGCTGGGCACCCAGAGCCAAGTaGCCAGCCAGCGGCAGCAACAGCAGTAGCCCCAGTGGACATCGC +
Preference number: 5 (lower is better)
Translates to: ASSRRPRPCWAPRAK*PASGSNSSSPSGHR
Trigger: GCGATGTCCACTGGGGCTACTGCTGTTGCTGCCGCTGGCTGGCCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCGGGAGCTAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS-3UTR CAA 90 bp TGCGTCAGCGGAACCCGCGCCGGGATTAGCGCCCTGGCGCCCGCCTGCGCCCCGTCCATGCATACATCCTaGGATCGGGGGAAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: CVSGTRAGISALAPACAPSMHTS*DRGKRG
Trigger: CCCCCTTTTCCCCCGATCCAAGGATGTATGCATGGA...CGGGGCGCAGGCGGGCGCCAGGGCGCTAATCCCGGCGCGGGTTCCGCTGACGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CAA 90 bp CCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCGCCGCAGTCCAGTATTaGAGCGTCCTTCCATCTGGC +
Preference number: 5 (lower is better)
Translates to: PTGRSGGSASLACPRLPGAAVQY*SVLPSG
Trigger: GCCAGATGGAAGGACGCTCAAATACTGGACTGCGGC...GCCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGGCTGGGCCCCAGGAGTaGGCCGCAGTCCAGTATTTG +
Preference number: 5 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAAGPQE*AAVQYL
Trigger: CAAATACTGGACTGCGGCCAACTCCTGGGGCCCAGC...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGCTGGCTTTGGTAGTCTaGAGTGGGGGCGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PLGPLPPALSLDPRPDPALALVV*SGGARG
Trigger: GCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAG...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS GCA 90 bp ACCCCGCGTGGTGCCCGCAGCCTCAGTGATGACCCATGTCCTCCATaGCCACGCGGCCCCAGACGCCCAGCACGAAGCTCTCGATGTCGC +
Preference number: 5 (lower is better)
Translates to: TPRGARSLSDDPCPP*PRGPRRPARSSRCR
Trigger: GCGACATCGAGAGCTTCGTGCTGGGCGTCTGGGGCCGCGTGGGCATGGAGGACATGGGTCATCACTGAGGCTGCGGGCACCACGCGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000463112.1
ENST00000481165.5
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCTCCATGCATACATCCTaGGATCGGGGGAAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: PVPTGRSGGSASLACPRLSMHTS*DRGKRG
Trigger: CCCCCTTTTCCCCCGATCCAAGGATGTATGCATGGA...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000457433.6
CDS-3UTR CAA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCTCCTTCATGATCTCCTaGTCGTTGGAGCCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSSFMIS*SLEPRR
Trigger: CCGCCTCGGCTCCAACGACAAGGAGATCATGAAGGA...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCCCCCATCCTGTGATCTaGACTGAGTGGGTCCCATGC +
Preference number: 5 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSPHPVI*TEWVPC
Trigger: GCATGGGACCCACTCAGTCAAGATCACAGGATGGGG...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACGCTGGGCCCCAGGAGTaGGCCGCAGTCCAGTATTTG +
Preference number: 5 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDAGPQE*AAVQYL
Trigger: CAAATACTGGACTGCGGCCAACTCCTGGGGCCCAGC...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACTCGATGTCGCACTCATaGACGCCGCGCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDSMSHS*TPRTMR
Trigger: CCGCATCGTGCGCGGCGTCAATGAGTGCGACATCGA...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS GCA 90 bp CGCAGGAACCACCAGGCACCATCGAGACGCCCACCGCGGCAGCCCTaGTGCTGGTGGGTGTCACAAGACAGCAGGTTCTGGGGCGACAGG +
Preference number: 5 (lower is better)
Translates to: RRNHQAPSRRPPRQP*CWWVSQDSRFWGDR
Trigger: CCTGTCGCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTGGTGGTTCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS CCA 90 bp CACCAGGCACCATCGAGACGCCCACCGCGGCAGCCCTGCTGCTGGTaGGTGTCACAAGACAGCAGGTTCTGGGGCGACAGGACAGGCGTC +
Preference number: 5 (lower is better)
Translates to: HQAPSRRPPRQPCCW*VSQDSRFWGDRTGV
Trigger: GACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCGTGCAACGGTTACAGTaGTCCCAGTACGTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PVPTGRSGGSASLACPRLVQRLQ*SQYVPK
Trigger: CTTGGGAACGTACTGGGACAACTGTAACCGTTGCAC...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCGTCCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCGTCCCAGAGAATGGATaGAGACACGATCGGATGCCA +
Preference number: 5 (lower is better)
Translates to: PVPTGRSGGSASLACPRLVPENG*RHDRMP
Trigger: TGGCATCCGATCGTGTCTCAATCCATTCTCTGGGAC...GAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGGTCCCAGAGAATGGATaGAGACACGATCGGATGCCA +
Preference number: 5 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRVPENG*RHDRMP
Trigger: TGGCATCCGATCGTGTCTCAATCCATTCTCTGGGAC...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CCCCACTGGGAGGTCTGGGGGCTCCGCCAGTCTCGCCTGCCCGCGGCTCCCAGGCAGCAACGGTTACAGTaGTCCCAGTACGTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PHWEVWGLRQSRLPAAPRQQRLQ*SQYVPK
Trigger: CTTGGGAACGTACTGGGACAACTGTAACCGTTGCTG...CCTGGGAGCCGCGGGCAGGCGAGACTGGCGGAGCCCCCAGACCTCCCAGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457433.6
CDS CCA 90 bp AGCAGTCGGAGACCGTGCGGTTGCAGAAGAGGTCACAGTAACAGATaGCGCCCAGGTAGGGCAGGGCACAGTCGTCGGCACGGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: SSRRPCGCRRGHSNR*RPGRAGHSRRHGRG
Trigger: GCCGCGGCCGTGCCGACGACTGTGCCCTGCCCTACCTGGGCGCCATCTGTTACTGTGACCTCTTCTGCAACCGCACGGTCTCCGACTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS CCA 90 bp AACCACCAGGCACCATCGAGACGCCCACCGCGGCAGCCCTGCTGCTaGTGGGTGTCACAAGACAGCAGGTTCTGGGGCGACAGGACAGGC +
Preference number: 5 (lower is better)
Translates to: NHQAPSRRPPRQPCC*WVSQDSRFWGDRTG
Trigger: GCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTGGTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS-3UTR CAA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCAGGAGCCTGCACAGTaGCCTTGGTCAAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDQEPAQ*PWSRGS
Trigger: TGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCTG...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTCAGGAGCCTGCACAGTaGCCTTGGTCAAGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRQEPAQ*PWSRGS
Trigger: TGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCTG...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp TTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGGTGCCCGCAGCGTCCCAGAGAATGGATaGAGACACGATCGGATGCCA +
Preference number: 5 (lower is better)
Translates to: FRRPLAWIPGRTPRGARSVPENG*RHDRMP
Trigger: TGGCATCCGATCGTGTCTCAATCCATTCTCTGGGAC...GCTGCGGGCACCACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCACCTCCATGAGGGCTaGGACAGGGCCATTCTCCAT +
Preference number: 5 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDHLHEG*DRAILH
Trigger: ATGGAGAATGGCCCTGTCCAAGCCCTCATGGAGGTG...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS-3UTR CAA 90 bp ACCGCCCCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCCATCCTGTGATCTaGACTGAGTGGGTCCCATGC +
Preference number: 5 (lower is better)
Translates to: TAPLGPLPPALSLDPRPDPHPVI*TEWVPC
Trigger: GCATGGGACCCACTCAGTCAAGATCACAGGATGGGG...GTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGGGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS GCA 90 bp GGCGGATGGTGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGTCATaGCCCAGAAGGCGCTGTGGTTCCCAGCCTGCCAGCCATAGTTGC +
Preference number: 5 (lower is better)
Translates to: GGWCPGGSECPHPGS*PRRRCGSQPASHSC
Trigger: GCAACTATGGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGGCATTCGCTACCGCCTGGGCACCATCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000271064.12
ENST00000468635.5
ENST00000478398.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 90 bp AGGAACCACCAGGCACCATCGAGACGCCCACCGCGGCAGCCCTGCTaGTGGTGGGTGTCACAAGACAGCAGGTTCTGGGGCGACAGGACA +
Preference number: 5 (lower is better)
Translates to: RNHQAPSRRPPRQPC*WWVSQDSRFWGDRT
Trigger: TGTCCTGTCGCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTGGTGGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 90 bp GGCGGATGGTGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGTCATaGCCCAGAAGGCGCTGTGGTTCCCAGCCTGCCAGCAACGGTTAC +
Preference number: 5 (lower is better)
Translates to: GGWCPGGSECPHPGS*PRRRCGSQPASNGY
Trigger: GTAACCGTTGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGGCATTCGCTACCGCCTGGGCACCATCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457433.6
CDS-3UTR CAA 90 bp CCATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGGTGCAACGGTTACAGTaGTCCCAGTACGTTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PLGPLPPALSLDPRPDPAVQRLQ*SQYVPK
Trigger: CTTGGGAACGTACTGGGACAACTGTAACCGTTGCAC...CGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000537531.2
CDS GCA 90 bp TGCCCACACGCCCCTCACCCTGTGATCTTGACTGAGTGGGTCCCATaGCGGCGGTATCTCTCTGGCCTCCCAAGGCTCACTGGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: CPHAPHPVILTEWVP*RRYLSGLPRLTGVW
Trigger: CCACACGCCAGTGAGCCTTGGGAGGCCAGAGAGATACCGCCGGCATGGGACCCACTCAGTCAAGATCACAGGGTGAGGGGCGTGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480586.1
ENST00000481165.5
CDS-3UTR CAA 90 bp CATTGGGGCCTCTTCCGCCGGCCCTTAGCCTGGATCCCAGGCCGGACCCCGCGTGCCTGCACAGTTGCCTaGGTCAAGAGGCTCATGAAT +
Preference number: 5 (lower is better)
Translates to: HWGLFRRPLAWIPGRTPRACTVA*VKRLMN
Trigger: ATTCATGAGCCTCTTGACCAAGGCAACTGTGCAGGC...ACGCGGGGTCCGGCCTGGGATCCAGGCTAAGGGCCGGCGGAAGAGGCCCCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS TCA 90 bp CCAGGGTCATGCCCCAGAAGGCGCTGTGGTTCCCAGCCTGCCAGCTaGAGGAGAGGGGACGGAAGGAAGTCACAGATCTGCCGAGGCTCA +
Preference number: 5 (lower is better)
Translates to: PGSCPRRRCGSQPAS*RRGDGRKSQICRGS
Trigger: TGAGCCTCGGCAGATCTGTGACTTCCTTCCGTCCCCTCTCCTTCAGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS GCA 90 bp CCCTCATCCAGGGTCATGCCCCAGAAGGCGCTGTGGTTCCCAGCCTaGCAGCTGAAGGAGAGGGGACGGAAGGAAGTCACAGATCTGCCG +
Preference number: 5 (lower is better)
Translates to: PSSRVMPQKALWFPA*QLKERGRKEVTDLP
Trigger: CGGCAGATCTGTGACTTCCTTCCGTCCCCTCTCCTTCAGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS GCA 90 bp GGGAGCTGGGTCTACCTGCTCTCAGGAGCTCCAATCCCGGAAACCTaGCCCATCCAGCCCCCAGTTGCCTTTGGAGGGTTGGGTACACCC +
Preference number: 5 (lower is better)
Translates to: GSWVYLLSGAPIPET*PIQPPVAFGGLGTP
Trigger: GGGTGTACCCAACCCTCCAAAGGCAACTGGGGGCTGGATGGGGCAGGTTTCCGGGATTGGAGCTCCTGAGAGCAGGTAGACCCAGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481165.5
CDS CCA 90 bp GACGGAAGGAAGTCACAGATCTGCCGAGGCTCAGGGTCCTTGGCGTaGGTGCATGTGGGTGGGAGAGACGCACAGTGGCTGAGCGCACAC +
Preference number: 5 (lower is better)
Translates to: DGRKSQICRGSGSLA*VHVGGRDAQWLSAH
Trigger: GTGTGCGCTCAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACCCTGAGCCTCGGCAGATCTGTGACTTCCTTCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS TCA 90 bp GGTCCTTGGCGTGGGTGCATGTGGGTGGGAGAGACGCACAGTGGCTaGGCGCACACACAGTCAAATCTGGGTGTAGGAGTGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GPWRGCMWVGETHSG*AHTQSNLGVGVACW
Trigger: CCAGCAGGCCACTCCTACACCCAGATTTGACTGTGTGTGCGCTCAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS GCA 90 bp GGCAGAAGTCCCAGAAGTCAGGGCAGCAGTCGGAGACCGTGCGGTTaGAGAAGAGGTCACAGTAACAGATGGCGCCCAGGTAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GRSPRSQGSSRRPCG*RRGHSNRWRPGRAG
Trigger: CCCTGCCCTACCTGGGCGCCATCTGTTACTGTGACCTCTTCTGCAACCGCACGGTCTCCGACTGCTGCCCTGACTTCTGGGACTTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 90 bp AGCGTCTCCTCTCCCCATCCTGTGATCTTGACTGAGTGGGTCCCATaGCGGCGGTATCTCTCTGGCCTCCCAAGGCTCACTGGCGTGTGG +
Preference number: 5 (lower is better)
Translates to: SVSSPHPVILTEWVP*RRYLSGLPRLTGVW
Trigger: CCACACGCCAGTGAGCCTTGGGAGGCCAGAGAGATACCGCCGGCATGGGACCCACTCAGTCAAGATCACAGGATGGGGAGAGGAGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000463112.1
ENST00000537531.2
CDS GCA 90 bp CTCAGGAGCTCCAATCCCGGAAACCTGCCCCATCCAGCCCCCAGTTaGCTTTGGAGGGTTGGGTACACCCTTAGGGCTCAGGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: LRSSNPGNLPHPAPS*LWRVGYTLRAQAGL
Trigger: GAGACCTGCCTGAGCCCTAAGGGTGTACCCAACCCTCCAAAGGCAACTGGGGGCTGGATGGGGCAGGTTTCCGGGATTGGAGCTCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481165.5
CDS CCA 90 bp CCGCGGCAGCCCTGCTGCTGGTGGGTGTCACAAGACAGCAGGTTCTaGGGCGACAGGACAGGCGTCATGTGTCCCAGAGAATGGATTGAG +
Preference number: 5 (lower is better)
Translates to: PRQPCCWWVSQDSRF*GDRTGVMCPREWIE
Trigger: CTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCGCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS-3UTR CAA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCTCGATGTCGCACTCATaGACGCCGCGCACGATGCGG +
Preference number: 5 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGISMSHS*TPRTMR
Trigger: CCGCATCGTGCGCGGCGTCAATGAGTGCGACATCGA...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS CCA 90 bp ACAGATCTGCCGAGGCTCAGGGTCCTTGGCGTGGGTGCATGTGGGTaGGAGAGACGCACAGTGGCTGAGCGCACACACAGTCAAATCTGG +
Preference number: 5 (lower is better)
Translates to: TDLPRLRVLGVGACG*ERRTVAERTHSQIW
Trigger: CCAGATTTGACTGTGTGTGCGCTCAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACCCTGAGCCTCGGCAGATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS CCA 90 bp CACTTTGGGCCTGGTTTTCATTCCTCTCCCAGAGGGTCCCACTGGTaGGAAGGGAGAAGCCCTCTCCTCCCTTGGGGTTCCGCTGAACCG +
Preference number: 5 (lower is better)
Translates to: HFGPGFHSSPRGSHW*EGRSPLLPWGSAEP
Trigger: CGGTTCAGCGGAACCCCAAGGGAGGAGAGGGCTTCTCCCTTCCCACCAGTGGGACCCTCTGGGAGAGGAATGAAAACCAGGCCCAAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 90 bp AGCTCCAATCCCGGAAACCTGCCCCATCCAGCCCCCAGTTGCCTTTaGAGGGTTGGGTACACCCTTAGGGCTCAGGCAGGTCTCTGTACC +
Preference number: 5 (lower is better)
Translates to: SSNPGNLPHPAPSCL*RVGYTLRAQAGLCT
Trigger: GGTACAGAGACCTGCCTGAGCCCTAAGGGTGTACCCAACCCTCCAAAGGCAACTGGGGGCTGGATGGGGCAGGTTTCCGGGATTGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481165.5
CDS GCA 90 bp CCTCAGGGGAGGGAAGAGGCAGTAGGGTCCCGTGACCAGGCAGTCTaGCAACACAAACAGCAAGAGGCAGAAAATAGCCAGAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PQGREEAVGSRDQAV*QHKQQEAENSQRPR
Trigger: CCTGGGCCTCTGGCTATTTTCTGCCTCTTGCTGTTTGTGTTGGCAGACTGCCTGGTCACGGGACCCTACTGCCTCTTCCCTCCCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 90 bp GGGCCACTTCTCAGAGGCCTCGAAGGCTGTGGGAAGCACCTCCCCTaGGTTCAGCACTGTCTGCAAGATAAAGGTTGCCCTGTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GPLLRGLEGCGKHLP*VQHCLQDKGCPVCL
Trigger: GAGGCAGACAGGGCAACCTTTATCTTGCAGACAGTGCTGAACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCTCTGAGAAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS-3UTR CAA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCCACCTCCATGAGGGCTaGGACAGGGCCATTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGIHLHEG*DRAILH
Trigger: ATGGAGAATGGCCCTGTCCAAGCCCTCATGGAGGTG...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000537531.2
CDS TCA 90 bp GAGAAGGCCCAGGAGCCTGCACAGTTGCCTTGGTCAAGAGGCTCATaGATCAGGTTGGGCCACTTCTCAGAGGCCTCGAAGGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: EKAQEPAQLPWSRGS*IRLGHFSEASKAVG
Trigger: TCCCACAGCCTTCGAGGCCTCTGAGAAGTGGCCCAACCTGATTCATGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS TCA 90 bp GTTCTGGGGCGACAGGACAGGCGTCATGTGTCCCAGAGAATGGATTaGGACACGATCGGATGCCACAGCTGCTGTGGAGAAGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: VLGRQDRRHVSQRMD*DTIGCHSCCGEGPG
Trigger: TCCTGGGCCTTCTCCACAGCAGCTGTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCGCCCCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 90 bp CGGATGCCACAGCTGCTGTGGAGAAGGCCCAGGAGCCTGCACAGTTaGCTTGGTCAAGAGGCTCATGAATCAGGTTGGGCCACTTCTCAG +
Preference number: 5 (lower is better)
Translates to: RMPQLLWRRPRSLHS*LGQEAHESGWATSQ
Trigger: CTGAGAAGTGGCCCAACCTGATTCATGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTCTCCACAGCAGCTGTGGCATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 90 bp TCAGGTGCCCATTGGCACTGGAGGGCCACCAAGTCCAGGGCCTTCTaGAGTTTAATCTTGAGCCCTCCTGCTGCTGCAGGATTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SGAHWHWRATKSRAF*SLILSPPAAAGFQL
Trigger: CAGCTGGAATCCTGCAGCAGCAGGAGGGCTCAAGATTAAACTGCAGAAGGCCCTGGACTTGGTGGCCCTCCAGTGCCAATGGGCACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 90 bp CTCAGCCCGTTGGCACAGGCACTGGAGCCTGAGTCTATTGAGATGTaGCCAGGCACCAGGGTCCCTCCATACCAAAGCTCTAAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LSPLAQALEPESIEM*PGTRVPPYQSSKCS
Trigger: GGAGCACTTAGAGCTTTGGTATGGAGGGACCCTGGTGCCTGGGCACATCTCAATAGACTCAGGCTCCAGTGCCTGTGCCAACGGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 90 bp AGCAGGTTCTGGGGCGACAGGACAGGCGTCATGTGTCCCAGAGAATaGATTGAGACACGATCGGATGCCACAGCTGCTGTGGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SRFWGDRTGVMCPRE*IETRSDATAAVEKA
Trigger: GGCCTTCTCCACAGCAGCTGTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCGCCCCAGAACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS CCA 90 bp ATGAGGGCTGTGGGCAGATGTCAAGGTAGGGTCCACTCAGCCCGTTaGCACAGGCACTGGAGCCTGAGTCTATTGAGATGTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: MRAVGRCQGRVHSAR*HRHWSLSLLRCAQA
Trigger: TGCCTGGGCACATCTCAATAGACTCAGGCTCCAGTGCCTGTGCCAACGGGCTGAGTGGACCCTACCTTGACATCTGCCCACAGCCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 90 bp CTCGTTCACGGCCCGAGAAGGGGTAGCAGTGGTCAGACACCACCCTaGAAAGGCAGCAAGAGGGAGCAAAGGCAGAAAGACTCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: LVHGPRRGSSGQTPP*KGSKREQRQKDSVH
Trigger: ATGCACTGAGTCTTTCTGCCTTTGCTCCCTCTTGCTGCCTTTGCAGGGTGGTGTCTGACCACTGCTACCCCTTCTCGGGCCGTGAACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 90 bp CCTGGCCCTACTGGACATGCTGCTGAATGCTGTGCAGGCCACTTGTaGTACTGTGCCCACTCTCAAGCAGGCACAAGCTTCTGGAACCAG +
Preference number: 5 (lower is better)
Translates to: PGPTGHAAECCAGHL*YCAHSQAGTSFWNQ
Trigger: CTGGTTCCAGAAGCTTGTGCCTGCTTGAGAGTGGGCACAGTAGCACAAGTGGCCTGCACAGCATTCAGCAGCATGTCCAGTAGGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 90 bp CTGTGCCCACTCTCAAGCAGGCACAAGCTTCTGGAACCAGGGTGCTaGATAAGGGGGTTTACCTTGGACAGGGCCATTCTCCATCAGCTC +
Preference number: 5 (lower is better)
Translates to: LCPLSSRHKLLEPGC*IRGFTLDRAILHQL
Trigger: GAGCTGATGGAGAATGGCCCTGTCCAAGGTAAACCCCCTTATCCAGCACCCTGGTTCCAGAAGCTTGTGCCTGCTTGAGAGTGGGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 90 bp CTACTGTGCCCACTCTCAAGCAGGCACAAGCTTCTGGAACCAGGGTaGTGGATAAGGGGGTTTACCTTGGACAGGGCCATTCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: LLCPLSSRHKLLEPG*WIRGFTLDRAILHQ
Trigger: CTGATGGAGAATGGCCCTGTCCAAGGTAAACCCCCTTATCCAGCACCCTGGTTCCAGAAGCTTGTGCCTGCTTGAGAGTGGGCACAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 90 bp ACATCCACCTGCCCTCCCTCACTTGGGGATCCAGGGAGGGGTAGGTaGCAAGGGCCAGAAGGAAGACACTCTGAGAATATGGGTATCTTA +
Preference number: 5 (lower is better)
Translates to: TSTCPPSLGDPGRGR*QGPEGRHSENMGIL
Trigger: TAAGATACCCATATTCTCAGAGTGTCTTCCTTCTGGCCCTTGGCACCTACCCCTCCCTGGATCCCCAAGTGAGGGAGGGCAGGTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480586.1
ENST00000481165.5
CDS CCA 90 bp GTTGCCCTGGTTGATGGCTTTGATCATGTCTGGATCCACCAGGCATaGTTCTTGGTCACACTGCCACTGCCTGTTCTCCTGGCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: VALVDGFDHVWIHQA*FLVTLPLPVLLAGA
Trigger: TGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGCCATCAACCAGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271064.12
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000537531.2
CDS CCA 90 bp CAGCCCAAGAGTGAGTCAGCAGGTGCGGCCAGCACCTTCCGTGTCTaGAAAAGAGACAGGATTGGGAGAAAATGTGGGAGGTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: QPKSESAGAASTFRV*KRDRIGRKCGRLPF
Trigger: AAAGGGCAACCTCCCACATTTTCTCCCAATCCTGTCTCTTTTCCAGACACGGAAGGTGCTGGCCGCACCTGCTGACTCACTCTTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS CCA 90 bp GGGGTTCCGCTGAACCGGCATTTATTTCCGAGAACTGCTGCCCTCTaGCCAGAACTGGAGGAGTGTGTGTCCTTCCCTTCCCAAAATACC +
Preference number: 5 (lower is better)
Translates to: GVPLNRHLFPRTAAL*PELEECVSFPSQNT
Trigger: GGTATTTTGGGAAGGGAAGGACACACACTCCTCCAGTTCTGGCCAGAGGGCAGCAGTTCTCGGAAATAAATGCCGGTTCAGCGGAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 90 bp TGGTTGATGGCTTTGATCATGTCTGGATCCACCAGGCATGGTTCTTaGTCACACTGCCACTGCCTGTTCTCCTGGCAGGTGCTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: WLMALIMSGSTRHGS*SHCHCLFSWQVLAL
Trigger: AAGGGCCAGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGCCATCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498429.5
CDS CCA 90 bp GTTGCCCTGGTTGATGGCTTTGATCATGTCTGGATCCACCAGGCATaGTTCTTGGTCACACTGCCACTGCCTGTTCTCCTGGCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: VALVDGFDHVWIHQA*FLVTLPLPVLLAGA
Trigger: AGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGCCATCAACCAGGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498429.5
CDS GCA 90 bp ATCATGTCTGGATCCACCAGGCATGGTTCTTGGTCACACTGCCACTaGCTGTTCTCCTGGCAGGTGCAACGGTTACAGTTGTCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: IMSGSTRHGSWSHCH*LFSWQVQRLQLSQY
Trigger: GTACTGGGACAACTGTAACCGTTGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271064.12
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000537531.2
CDS GCA 90 bp GCTTTGATCATGTCTGGATCCACCAGGCATGGTTCTTGGTCACACTaGCACTGCCTGTTCTCCTGGCAGGTGCAACGGTTACAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: ALIMSGSTRHGSWSH*HCLFSWQVQRLQLS
Trigger: GGACAACTGTAACCGTTGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271064.12
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000537531.2
CDS CCA 90 bp AGCAGGTGCGGCCAGCACCTTCCGTGTCTGGAAAAGAGACAGGATTaGGAGAAAATGTGGGAGGTTGCCCTTTCCCTGGGCCAAATTAGA +
Preference number: 5 (lower is better)
Translates to: SRCGQHLPCLEKRQD*EKMWEVALSLGQIR
Trigger: TCTAATTTGGCCCAGGGAAAGGGCAACCTCCCACATTTTCTCCCAATCCTGTCTCTTTTCCAGACACGGAAGGTGCTGGCCGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS CCA 90 bp TGGTTGATGGCTTTGATCATGTCTGGATCCACCAGGCATGGTTCTTaGTCACACTGCCACTGCCTGTTCTCCTGGCAGGTGCAACGGTTA +
Preference number: 5 (lower is better)
Translates to: WLMALIMSGSTRHGS*SHCHCLFSWQVQRL
Trigger: TAACCGTTGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGCCATCAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271064.12
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000537531.2
CDS CCA 90 bp GGATGGACTTACATAAATTTCATGCATGTTCATGACCGAGGAAGATaGGCGGATGGTGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGT +
Preference number: 5 (lower is better)
Translates to: GWTYINFMHVHDRGR*ADGAQAVANALIQG
Trigger: ACCCTGGATGAGGGCATTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGAAATTTATGTAAGTCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481165.5
CDS TCA 90 bp GCATTGTGGGGAAGGATGGACTTACATAAATTTCATGCATGTTCATaGCCGAGGAAGATGGGCGGATGGTGCCCAGGCGGTAGCGAATGC +
Preference number: 5 (lower is better)
Translates to: ALWGRMDLHKFHACS*PRKMGGWCPGGSEC
Trigger: GCATTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGAAATTTATGTAAGTCCATCCTTCCCCACAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481165.5
CDS CCA 90 bp CTGGCAGGTGCAACGGTTACAGTTGTCCCAGTACGTTCCCAAGACTaGATAGATACGACCTCCATGCATACATCCTTGGATCGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: LAGATVTVVPVRSQD*IDTTSMHTSLDRGK
Trigger: TTTCCCCCGATCCAAGGATGTATGCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGGACAACTGTAACCGTTGCACCTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271064.12
ENST00000481165.5
CDS CCA 90 bp AGCCTGCCAGCAACGGTTACAGTTGTCCCAGTACGTTCCCAAGACTaGATAGATACGACCTCCATGCATACATCCTTGGATCGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: SLPATVTVVPVRSQD*IDTTSMHTSLDRGK
Trigger: TTTCCCCCGATCCAAGGATGTATGCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGGACAACTGTAACCGTTGCTGGCAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457433.6
CDS-3UTR CAA 90 bp TTGAGGTGTCCTGGCTTTGGTAGTCTTGAGTGGGGGCGCCAGAGGCCTGGGATCACATCCAACTGCTGTTaGGGAAGTTCTTCAATGATT +
Preference number: 5 (lower is better)
Translates to: LRCPGFGSLEWGRQRPGITSNCC*GSSSMI
Trigger: AATCATTGAAGAACTTCCCAAACAGCAGTTGGATGT...GATCCCAGGCCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537531.2
CDS CCA 90 bp CTGGCAGGTGCAACGGTTACAGTTGTCCCAGTACGTTCCCAAGACTaGATAGATACGACCTCCATGCATACATCCAACTGCTGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: LAGATVTVVPVRSQD*IDTTSMHTSNCCLG
Trigger: TCCCAAACAGCAGTTGGATGTATGCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGGACAACTGTAACCGTTGCACCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468635.5
ENST00000537531.2
CDS GCA 90 bp TCCCTGGGCCAAATTAGAATTCTAACCAAGGAGCTTCTTCAGTCTTaGTGGAGAGTAAAGTTCCCAGAGGGGCAGGGAAGAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SLGQIRILTKELLQS*WRVKFPEGQGRVPD
Trigger: ATCTGGGACTCTTCCCTGCCCCTCTGGGAACTTTACTCTCCAGCAAGACTGAAGAAGCTCCTTGGTTAGAATTCTAATTTGGCCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS CCA 90 bp CTGGGCCAAATTAGAATTCTAACCAAGGAGCTTCTTCAGTCTTGCTaGAGAGTAAAGTTCCCAGAGGGGCAGGGAAGAGTCCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: LGQIRILTKELLQSC*RVKFPEGQGRVPDS
Trigger: AGAATCTGGGACTCTTCCCTGCCCCTCTGGGAACTTTACTCTCCAGCAAGACTGAAGAAGCTCCTTGGTTAGAATTCTAATTTGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS GCA 72 bp CAGTACCGGCCTCCCGCGTCCCGGATGCCCCGCAGGTaGAGACCCGGTGCTAGCTCCCGGCGCCCACGACCC +
Preference number: 6 (lower is better)
Translates to: QYRPPASRMPRR*RPGASSRRPRP
Trigger: GGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAGGCCGGTACTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 72 bp CCTGCTCCTGGCAGTACCGGCCTCCCGCGTCCCGGATaGCCCGCAGGTGCAGACCCGGTGCTAGCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: PAPGSTGLPRPG*PAGADPVLAPG
Trigger: GCCGGGAGCTAGCACCGGGTCTGCACCTGCGGGGCATCCGGGACGCGGGAGGCCGGTACTGCCAGGAGCAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 72 bp TGCAGACCCGGTGCTAGCTCCCGGCGCCCACGACCCTaGTGGGCACCCAGAGCCAAGTGGCCAGCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: CRPGASSRRPRP*WAPRAKWPASG
Trigger: GCCGCTGGCTGGCCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS CCA 72 bp AGACCCGGTGCTAGCTCCCGGCGCCCACGACCCTGCTaGGCACCCAGAGCCAAGTGGCCAGCCAGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: RPGASSRRPRPC*APRAKWPASGS
Trigger: GCTGCCGCTGGCTGGCCACTTGGCTCTGGGTGCCCAGCAGGGTCGTGGGCGCCGGGAGCTAGCACCGGGTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 72 bp CAGGCACCATCGAGACGCCCACCGCGGCAGCCCTGCTaGTGGTGGGTGTCACAAGACAGCAGGTTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: QAPSRRPPRQPC*WWVSQDSRFWG
Trigger: GCCCCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS CCA 72 bp TCCTGCTCTGCCCTGGCCTGCCCCTCAGGTGCCCATTaGCACTGGAGGGCCACCAAGTCCAGGGCCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SCSALACPSGAH*HWRATKSRAFC
Trigger: GCAGAAGGCCCTGGACTTGGTGGCCCTCCAGTGCCAATGGGCACCTGAGGGGCAGGCCAGGGCAGAGCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp TGCCCAGGCGGTAGCGAATGCCCTCATCCAGGGTCATaGCCCAGAAGGCGCTGTGGTTCCCAGCCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: CPGGSECPHPGS*PRRRCGSQPAS
Trigger: GCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGGCATTCGCTACCGCCTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 72 bp CACCAGGCACCATCGAGACGCCCACCGCGGCAGCCCTaGTGCTGGTGGGTGTCACAAGACAGCAGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: HQAPSRRPPRQP*CWWVSQDSRFW
Trigger: CCAGAACCTGCTGTCTTGTGACACCCACCAGCAGCAGGGCTGCCGCGGTGGGCGTCTCGATGGTGCCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 72 bp CCCCTGCCTCCCCGCTGCCTGCCACTGATGGACAAATaGTCCGGCACATGTCCCGGTCCAGGCCTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: PLPPRCLPLMDK*SGTCPGPGLLK
Trigger: CTTCAGCAGGCCTGGACCGGGACATGTGCCGGAGCATTTGTCCATCAGTGGCAGGCAGCGGGGAGGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS TCA 72 bp AGACGCCCAGCACGAAGCTCTCGATGTCGCACTCATTaGCGCCGCGCACGATGCGGAAGTGGCCCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: RRPARSSRCRTH*RRARCGSGPSR
Trigger: GCGAGAGGGGCCACTTCCGCATCGTGCGCGGCGTCAATGAGTGCGACATCGAGAGCTTCGTGCTGGGCGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000463112.1
ENST00000481165.5
ENST00000537531.2
CDS CCA 72 bp ATGCCCTCATCCAGGGTCATGCCCCAGAAGGCGCTGTaGTTCCCAGCCTGCCAGCTGAAGGAGAGGGGACGG +
Preference number: 6 (lower is better)
Translates to: MPSSRVMPQKAL*FPACQLKERGR
Trigger: CCGTCCCCTCTCCTTCAGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS CCA 72 bp TGCCCACACGCCCCTCACCCTGTGATCTTGACTGAGTaGGTCCCATGCCGGCGGTATCTCTCTGGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: CPHAPHPVILTE*VPCRRYLSGLP
Trigger: TGGGAGGCCAGAGAGATACCGCCGGCATGGGACCCACTCAGTCAAGATCACAGGGTGAGGGGCGTGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480586.1
ENST00000481165.5
CDS CAA 90 bp AGAGGGGACGGAAGGAAGTCACAGATCTGCCGAGGCTCAGGGTCCTaGGCGTGGGTGCATGTGGGTGGGAGAGACGCACAGTGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RGDGRKSQICRGSGS*AWVHVGGRDAQWLS
Trigger: GCTCAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACCCTGAGCCTCGGCAGATCTGTGACTTCCTTCCGTCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS GCA 72 bp AGGGTCATGCCCCAGAAGGCGCTGTGGTTCCCAGCCTaGCAGCTGAAGGAGAGGGGACGGAAGGAAGTCACA +
Preference number: 6 (lower is better)
Translates to: RVMPQKALWFPA*QLKERGRKEVT
Trigger: TGTGACTTCCTTCCGTCCCCTCTCCTTCAGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS GCA 72 bp GCCCCTCACCCTGTGATCTTGACTGAGTGGGTCCCATaGCGGCGGTATCTCTCTGGCCTCCCAAGGCTCACT +
Preference number: 6 (lower is better)
Translates to: APHPVILTEWVP*RRYLSGLPRLT
Trigger: AGTGAGCCTTGGGAGGCCAGAGAGATACCGCCGGCATGGGACCCACTCAGTCAAGATCACAGGGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480586.1
ENST00000481165.5
CDS CCA 72 bp AGACCGTGCGGTTGCAGAAGAGGTCACAGTAACAGATaGCGCCCAGGTAGGGCAGGGCACAGTCGTCGGCAC +
Preference number: 6 (lower is better)
Translates to: RPCGCRRGHSNR*RPGRAGHSRRH
Trigger: GTGCCGACGACTGTGCCCTGCCCTACCTGGGCGCCATCTGTTACTGTGACCTCTTCTGCAACCGCACGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS CCA 72 bp AAGTCACAGATCTGCCGAGGCTCAGGGTCCTTGGCGTaGGTGCATGTGGGTGGGAGAGACGCACAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: KSQICRGSGSLA*VHVGGRDAQWL
Trigger: CAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACCCTGAGCCTCGGCAGATCTGTGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS CAA 72 bp GGAAGGAAGTCACAGATCTGCCGAGGCTCAGGGTCCTaGGCGTGGGTGCATGTGGGTGGGAGAGACGCACAG +
Preference number: 6 (lower is better)
Translates to: GRKSQICRGSGS*AWVHVGGRDAQ
Trigger: CTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACCCTGAGCCTCGGCAGATCTGTGACTTCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS TCA 72 bp GGGGACCCCTACTCCTGGCCCTACTGGACATGCTGCTaGATGCTGTGCAGGCCACTTGTGCTACTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: GDPYSWPYWTCC*MLCRPLVLLCP
Trigger: TGGGCACAGTAGCACAAGTGGCCTGCACAGCATTCAGCAGCATGTCCAGTAGGGCCAGGAGTAGGGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp ATGCCCTCATCCAGGGTCATGCCCCAGAAGGCGCTGTaGTTCCCAGCCTGCCAGCAACGGTTACAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: MPSSRVMPQKAL*FPACQQRLQLS
Trigger: GGACAACTGTAACCGTTGCTGGCAGGCTGGGAACCACAGCGCCTTCTGGGGCATGACCCTGGATGAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457433.6
CDS CCA 72 bp GAAGGAAGTCACAGATCTGCCGAGGCTCAGGGTCCTTaGCGTGGGTGCATGTGGGTGGGAGAGACGCACAGT +
Preference number: 6 (lower is better)
Translates to: EGSHRSAEAQGP*RGCMWVGETHS
Trigger: ACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAAGGACCCTGAGCCTCGGCAGATCTGTGACTTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS CCA 72 bp CCTGGTTTTCATTCCTCTCCCAGAGGGTCCCACTGGTaGGAAGGGAGAAGCCCTCTCCTCCCTTGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: PGFHSSPRGSHW*EGRSPLLPWGS
Trigger: GGAACCCCAAGGGAGGAGAGGGCTTCTCCCTTCCCACCAGTGGGACCCTCTGGGAGAGGAATGAAAACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp TCAGGTTGGGCCACTTCTCAGAGGCCTCGAAGGCTGTaGGAAGCACCTCCCCTGGGTTCAGCACTGTCTGCA +
Preference number: 6 (lower is better)
Translates to: SGWATSQRPRRL*EAPPLGSALSA
Trigger: TGCAGACAGTGCTGAACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCTCTGAGAAGTGGCCCAACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CAA 72 bp TCAGCCCGTTGGCACAGGCACTGGAGCCTGAGTCTATaGAGATGTGCCCAGGCACCAGGGTCCCTCCATACC +
Preference number: 6 (lower is better)
Translates to: SARWHRHWSLSL*RCAQAPGSLHT
Trigger: GGTATGGAGGGACCCTGGTGCCTGGGCACATCTCAATAGACTCAGGCTCCAGTGCCTGTGCCAACGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CAA 90 bp GGTTCTGGGGCGACAGGACAGGCGTCATGTGTCCCAGAGAATGGATaGAGACACGATCGGATGCCACAGCTGCTGTGGAGAAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GSGATGQASCVPENG*RHDRMPQLLWRRPR
Trigger: CCTGGGCCTTCTCCACAGCAGCTGTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCGCCCCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS TCA 72 bp CGTGGGTGCATGTGGGTGGGAGAGACGCACAGTGGCTaGGCGCACACACAGTCAAATCTGGGTGTAGGAGTG +
Preference number: 6 (lower is better)
Translates to: RGCMWVGETHSG*AHTQSNLGVGV
Trigger: CACTCCTACACCCAGATTTGACTGTGTGTGCGCTCAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS TCA 72 bp TTTCCCTCAGGGGAGGGAAGAGGCAGTAGGGTCCCGTaGCCAGGCAGTCTGCCAACACAAACAGCAAGAGGC +
Preference number: 6 (lower is better)
Translates to: FPSGEGRGSRVP*PGSLPTQTARG
Trigger: GCCTCTTGCTGTTTGTGTTGGCAGACTGCCTGGTCACGGGACCCTACTGCCTCTTCCCTCCCCTGAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp AAGGCAGAAAGACTCAGTGCATCATGGCCCAGGCCATaGCCACGGAGCTCCTTGCCCTCTTCTCTGCCCACA +
Preference number: 6 (lower is better)
Translates to: KAERLSASWPRP*PRSSLPSSLPT
Trigger: TGTGGGCAGAGAAGAGGGCAAGGAGCTCCGTGGGCATGGCCTGGGCCATGATGCACTGAGTCTTTCTGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp TTGGCGTGGGTGCATGTGGGTGGGAGAGACGCACAGTaGCTGAGCGCACACACAGTCAAATCTGGGTGTAGG +
Preference number: 6 (lower is better)
Translates to: LAWVHVGGRDAQ*LSAHTVKSGCR
Trigger: CCTACACCCAGATTTGACTGTGTGTGCGCTCAGCCACTGTGCGTCTCTCCCACCCACATGCACCCACGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS CCA 72 bp CAAGAGGGAGCAAAGGCAGAAAGACTCAGTGCATCATaGCCCAGGCCATGCCCACGGAGCTCCTTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: QEGAKAERLSAS*PRPCPRSSLPS
Trigger: AGAGGGCAAGGAGCTCCGTGGGCATGGCCTGGGCCATGATGCACTGAGTCTTTCTGCCTTTGCTCCCTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CAA 90 bp AGGGTCCACTCAGCCCGTTGGCACAGGCACTGGAGCCTGAGTCTATaGAGATGTGCCCAGGCACCAGGGTCCCTCCATACCAAAGCTCTA +
Preference number: 6 (lower is better)
Translates to: RVHSARWHRHWSLSL*RCAQAPGSLHTKAL
Trigger: TAGAGCTTTGGTATGGAGGGACCCTGGTGCCTGGGCACATCTCAATAGACTCAGGCTCCAGTGCCTGTGCCAACGGGCTGAGTGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS TCA 72 bp GGAAGGGAGAAGCCCTCTCCTCCCTTGGGGTTCCGCTaGACCGGCATTTATTTCCGAGAACTGCTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: GREKPSPPLGFR*TGIYFRELLPS
Trigger: AGAGGGCAGCAGTTCTCGGAAATAAATGCCGGTTCAGCGGAACCCCAAGGGAGGAGAGGGCTTCTCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp AGAAGTCCCAGAAGTCAGGGCAGCAGTCGGAGACCGTaGGGTTGCAGAAGAGGTCACAGTAACAGATGGCGC +
Preference number: 6 (lower is better)
Translates to: RSPRSQGSSRRP*GCRRGHSNRWR
Trigger: GCGCCATCTGTTACTGTGACCTCTTCTGCAACCGCACGGTCTCCGACTGCTGCCCTGACTTCTGGGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000466998.1
ENST00000481165.5
CDS GCA 72 bp GCGCACACACAGTCAAATCTGGGTGTAGGAGTGGCCTaGTGGACGTGCCCCACAGCACAGCATGCGTGTATA +
Preference number: 6 (lower is better)
Translates to: AHTQSNLGVGVA*WTCPTAQHACI
Trigger: TATACACGCATGCTGTGCTGTGGGGCACGTCCAGCAGGCCACTCCTACACCCAGATTTGACTGTGTGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS GCA 72 bp CATTGGCACTGGAGGGCCACCAAGTCCAGGGCCTTCTaGAGTTTAATCTTGAGCCCTCCTGCTGCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: HWHWRATKSRAF*SLILSPPAAAG
Trigger: TCCTGCAGCAGCAGGAGGGCTCAAGATTAAACTGCAGAAGGCCCTGGACTTGGTGGCCCTCCAGTGCCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp ACCCCTACTCCTGGCCCTACTGGACATGCTGCTGAATaGTGTGCAGGCCACTTGTGCTACTGTGCCCACTCT +
Preference number: 6 (lower is better)
Translates to: TPTPGPTGHAAE*CAGHLCYCAHS
Trigger: AGAGTGGGCACAGTAGCACAAGTGGCCTGCACAGCATTCAGCAGCATGTCCAGTAGGGCCAGGAGTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp TGGGGCGACAGGACAGGCGTCATGTGTCCCAGAGAATaGATTGAGACACGATCGGATGCCACAGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: WGDRTGVMCPRE*IETRSDATAAV
Trigger: CACAGCAGCTGTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS CAA 90 bp ACTCCTGGCCCTACTGGACATGCTGCTGAATGCTGTGCAGGCCACTaGTGCTACTGTGCCCACTCTCAAGCAGGCACAAGCTTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: TPGPTGHAAECCAGH*CYCAHSQAGTSFWN
Trigger: GTTCCAGAAGCTTGTGCCTGCTTGAGAGTGGGCACAGTAGCACAAGTGGCCTGCACAGCATTCAGCAGCATGTCCAGTAGGGCCAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CAA 90 bp CTGGTTGATGGCTTTGATCATGTCTGGATCCACCAGGCATGGTTCTaGGTCACACTGCCACTGCCTGTTCTCCTGGCAGGTGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: LVDGFDHVWIHQAWF*VTLPLPVLLAGAGP
Trigger: AGGGCCAGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGCCATCAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498429.5
CDS TCA 72 bp CAGGAGCCTGCACAGTTGCCTTGGTCAAGAGGCTCATaGATCAGGTTGGGCCACTTCTCAGAGGCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: QEPAQLPWSRGS*IRLGHFSEASK
Trigger: CTTCGAGGCCTCTGAGAAGTGGCCCAACCTGATTCATGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 72 bp CTGGCCTCCCAAGGCTCACTGGCGTGTGGCTGTAGATaGCTCCCTTGTATAGGAAGAAGTCCTCATGCACCT +
Preference number: 6 (lower is better)
Translates to: LASQGSLACGCR*LPCIGRSPHAP
Trigger: AGGTGCATGAGGACTTCTTCCTATACAAGGGAGGCATCTACAGCCACACGCCAGTGAGCCTTGGGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000463112.1
ENST00000480586.1
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 72 bp TGGGGTTCCGCTGAACCGGCATTTATTTCCGAGAACTaGTGCCCTCTGGCCAGAACTGGAGGAGTGTGTGTC +
Preference number: 6 (lower is better)
Translates to: WGSAEPAFISEN*CPLARTGGVCV
Trigger: GACACACACTCCTCCAGTTCTGGCCAGAGGGCAGCAGTTCTCGGAAATAAATGCCGGTTCAGCGGAACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp TTGGCACAGGCACTGGAGCCTGAGTCTATTGAGATGTaGCCAGGCACCAGGGTCCCTCCATACCAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: LAQALEPESIEM*PGTRVPPYQSS
Trigger: AGAGCTTTGGTATGGAGGGACCCTGGTGCCTGGGCACATCTCAATAGACTCAGGCTCCAGTGCCTGTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp TCAGGTTGGGCCACTTCTCAGAGGCCTCGAAGGCTGTaGGAAGCACCTCCCCTGGGTTCAGCACTGTATAAA +
Preference number: 6 (lower is better)
Translates to: SGWATSQRPRRL*EAPPLGSALYK
Trigger: TTTATACAGTGCTGAACCCAGGGGAGGTGCTTCCCACAGCCTTCGAGGCCTCTGAGAAGTGGCCCAACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000498429.5
ENST00000537531.2
CDS CCA 72 bp GTTGGCCGCAGTCCAGTATTTGAGCGTCCTTCCATCTaGCAGCGTCTCCTCTCCCCATCCTGTGATCTTGAC +
Preference number: 6 (lower is better)
Translates to: VGRSPVFERPSI*QRLLSPSCDLD
Trigger: GTCAAGATCACAGGATGGGGAGAGGAGACGCTGCCAGATGGAAGGACGCTCAAATACTGGACTGCGGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000463112.1
ENST00000537531.2
CDS CCA 72 bp GTGGGCAGATGTCAAGGTAGGGTCCACTCAGCCCGTTaGCACAGGCACTGGAGCCTGAGTCTATTGAGATGT +
Preference number: 6 (lower is better)
Translates to: VGRCQGRVHSAR*HRHWSLSLLRC
Trigger: ACATCTCAATAGACTCAGGCTCCAGTGCCTGTGCCAACGGGCTGAGTGGACCCTACCTTGACATCTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CAA 72 bp TGCTGTGGAGAAGGCCCAGGAGCCTGCACAGTTGCCTaGGTCAAGAGGCTCATGAATCAGGTTGGGCCACTT +
Preference number: 6 (lower is better)
Translates to: CCGEGPGACTVA*VKRLMNQVGPL
Trigger: AAGTGGCCCAACCTGATTCATGAGCCTCTTGACCAAGGCAACTGTGCAGGCTCCTGGGCCTTCTCCACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS CAA 72 bp GCGACAGGACAGGCGTCATGTGTCCCAGAGAATGGATaGAGACACGATCGGATGCCACAGCTGCTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: ATGQASCVPENG*RHDRMPQLLWR
Trigger: TCTCCACAGCAGCTGTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS CAA 72 bp CCTACTGGACATGCTGCTGAATGCTGTGCAGGCCACTaGTGCTACTGTGCCCACTCTCAAGCAGGCACAAGC +
Preference number: 6 (lower is better)
Translates to: PTGHAAECCAGH*CYCAHSQAGTS
Trigger: GCTTGTGCCTGCTTGAGAGTGGGCACAGTAGCACAAGTGGCCTGCACAGCATTCAGCAGCATGTCCAGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS TCA 72 bp CGACAGGACAGGCGTCATGTGTCCCAGAGAATGGATTaGGACACGATCGGATGCCACAGCTGCTGTGGAGAA +
Preference number: 6 (lower is better)
Translates to: RQDRRHVSQRMD*DTIGCHSCCGE
Trigger: TTCTCCACAGCAGCTGTGGCATCCGATCGTGTCTCAATCCATTCTCTGGGACACATGACGCCTGTCCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000463112.1
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000498429.5
ENST00000537531.2
CDS GCA 72 bp AGGGAAGAGGCAGTAGGGTCCCGTGACCAGGCAGTCTaGCAACACAAACAGCAAGAGGCAGAAAATAGCCAG +
Preference number: 6 (lower is better)
Translates to: REEAVGSRDQAV*QHKQQEAENSQ
Trigger: CTGGCTATTTTCTGCCTCTTGCTGTTTGTGTTGGCAGACTGCCTGGTCACGGGACCCTACTGCCTCTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp CCACTCTCAAGCAGGCACAAGCTTCTGGAACCAGGGTaGTGGATAAGGGGGTTTACCTTGGACAGGGCCATT +
Preference number: 6 (lower is better)
Translates to: PLSSRHKLLEPG*WIRGFTLDRAI
Trigger: AATGGCCCTGTCCAAGGTAAACCCCCTTATCCAGCACCCTGGTTCCAGAAGCTTGTGCCTGCTTGAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp ACTGGACATGCTGCTGAATGCTGTGCAGGCCACTTGTaGTACTGTGCCCACTCTCAAGCAGGCACAAGCTTC +
Preference number: 6 (lower is better)
Translates to: TGHAAECCAGHL*YCAHSQAGTSF
Trigger: GAAGCTTGTGCCTGCTTGAGAGTGGGCACAGTAGCACAAGTGGCCTGCACAGCATTCAGCAGCATGTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp CACACACAGTCAAATCTGGGTGTAGGAGTGGCCTGCTaGACGTGCCCCACAGCACAGCATGCGTGTATACAT +
Preference number: 6 (lower is better)
Translates to: HTQSNLGVGVAC*TCPTAQHACIH
Trigger: ATGTATACACGCATGCTGTGCTGTGGGGCACGTCCAGCAGGCCACTCCTACACCCAGATTTGACTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461030.5
ENST00000481165.5
CDS CCA 72 bp CTCTCAAGCAGGCACAAGCTTCTGGAACCAGGGTGCTaGATAAGGGGGTTTACCTTGGACAGGGCCATTCTC +
Preference number: 6 (lower is better)
Translates to: LSSRHKLLEPGC*IRGFTLDRAIL
Trigger: GAGAATGGCCCTGTCCAAGGTAAACCCCCTTATCCAGCACCCTGGTTCCAGAAGCTTGTGCCTGCTTGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CAA 90 bp CTGGTTGATGGCTTTGATCATGTCTGGATCCACCAGGCATGGTTCTaGGTCACACTGCCACTGCCTGTTCTCCTGGCAGGTGCAACGGTT +
Preference number: 6 (lower is better)
Translates to: LVDGFDHVWIHQAWF*VTLPLPVLLAGATV
Trigger: AACCGTTGCACCTGCCAGGAGAACAGGCAGTGGCAGTGTGACCAAGAACCATGCCTGGTGGATCCAGACATGATCAAAGCCATCAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000271064.12
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000481165.5
ENST00000537531.2
CDS CAA 90 bp ACAGAGCTTCCCCTGGAAATGTCAGTGCATCCATCAGCTTTGCTCTaGAGCCTTGCTGAGTCTGAGGTGGACAAAGTGACCCACCCTCCT +
Preference number: 6 (lower is better)
Translates to: TELPLEMSVHPSALL*SLAESEVDKVTHPP
Trigger: AGGAGGGTGGGTCACTTTGTCCACCTCAGACTCAGCAAGGCTCAAGAGCAAAGCTGATGGATGCACTGACATTTCCAGGGGAAGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS CAA 90 bp AGGCACAAGCTTCTGGAACCAGGGTGCTGGATAAGGGGGTTTACCTaGGACAGGGCCATTCTCCATCAGCTCCTTCATGATCTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: RHKLLEPGCWIRGFT*DRAILHQLLHDLLV
Trigger: GACAAGGAGATCATGAAGGAGCTGATGGAGAATGGCCCTGTCCAAGGTAAACCCCCTTATCCAGCACCCTGGTTCCAGAAGCTTGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp CAGGGCCTTCTGCAGTTTAATCTTGAGCCCTCCTGCTaGTGCAGGATTCCAGCTGCCTCCAATTTTGACTTG +
Preference number: 6 (lower is better)
Translates to: QGLLQFNLEPSC*CRIPAASNFDL
Trigger: CAAGTCAAAATTGGAGGCAGCTGGAATCCTGCAGCAGCAGGAGGGCTCAAGATTAAACTGCAGAAGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp TGTATAAATTTCATGCATGTTCATGACCGAGGAAGATaGGCGGATGGTGCCCAGGCGGTAGCGAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: CINFMHVHDRGR*ADGAQAVANAL
Trigger: GAGGGCATTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGAAATTTATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000461030.5
ENST00000468635.5
ENST00000478398.5
ENST00000498429.5
ENST00000537531.2
CDS CCA 72 bp TACATAAATTTCATGCATGTTCATGACCGAGGAAGATaGGCGGATGGTGCCCAGGCGGTAGCGAATGCCCTC +
Preference number: 6 (lower is better)
Translates to: YINFMHVHDRGR*ADGAQAVANAL
Trigger: GAGGGCATTCGCTACCGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGAAATTTATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481165.5
CDS CAA 72 bp CCCCTGGAAATGTCAGTGCATCCATCAGCTTTGCTCTaGAGCCTTGCTGAGTCTGAGGTGGACAAAGTGACC +
Preference number: 6 (lower is better)
Translates to: PLEMSVHPSALL*SLAESEVDKVT
Trigger: GGTCACTTTGTCCACCTCAGACTCAGCAAGGCTCAAGAGCAAAGCTGATGGATGCACTGACATTTCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS CAA 90 bp GATTCTACAGAGCTTCCCCTGGAAATGTCAGTGCATCCATCAGCTTaGCTCTTGAGCCTTGCTGAGTCTGAGGTGGACAAAGTGACCCAC +
Preference number: 6 (lower is better)
Translates to: DSTELPLEMSVHPSA*LLSLAESEVDKVTH
Trigger: GTGGGTCACTTTGTCCACCTCAGACTCAGCAAGGCTCAAGAGCAAAGCTGATGGATGCACTGACATTTCCAGGGGAAGCTCTGTAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS TCA 72 bp GGAAGGATGGACTTACATAAATTTCATGCATGTTCATaGCCGAGGAAGATGGGCGGATGGTGCCCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: GRMDLHKFHACS*PRKMGGWCPGG
Trigger: ACCGCCTGGGCACCATCCGCCCATCTTCCTCGGTCATGAACATGCATGAAATTTATGTAAGTCCATCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS GCA 72 bp GGCCTTCTGCAGTTTAATCTTGAGCCCTCCTGCTGCTaGAGGATTCCAGCTGCCTCCAATTTTGACTTGTGT +
Preference number: 6 (lower is better)
Translates to: GLLQFNLEPSCC*RIPAASNFDLC
Trigger: ACACAAGTCAAAATTGGAGGCAGCTGGAATCCTGCAGCAGCAGGAGGGCTCAAGATTAAACTGCAGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463112.1
ENST00000481165.5
CDS CCA 72 bp GCAACGGTTACAGTTGTCCCAGTACGTTCCCAAGACTaGATAGATACGACCTCCATGCATACATCCAACTGC +
Preference number: 6 (lower is better)
Translates to: ATVTVVPVRSQD*IDTTSMHTSNC
Trigger: GCAGTTGGATGTATGCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGGACAACTGTAACCGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468635.5
ENST00000537531.2
CDS CCA 72 bp GCAACGGTTACAGTTGTCCCAGTACGTTCCCAAGACTaGATAGATACGACCTCCATGCATACATCCTTGGAT +
Preference number: 6 (lower is better)
Translates to: ATVTVVPVRSQD*IDTTSMHTSLD
Trigger: ATCCAAGGATGTATGCATGGAGGTCGTATCTATCCAGTCTTGGGAACGTACTGGGACAACTGTAACCGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271064.12
ENST00000457433.6
ENST00000481165.5
CDS CAA 72 bp GGACAGGTGCTGAGGTGGGGAGAGGTTGAGAAACTCTaGAGGCTCTCTTCATATTGGAGTTATTTTATCCCA +
Preference number: 6 (lower is better)
Translates to: GQVLRWGEVEKL*RLSSYWSYFIP
Trigger: TGGGATAAAATAACTCCAATATGAAGAGAGCCTCAAGAGTTTCTCAACCTCTCCCCACCTCAGCACCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480586.1
ENST00000481165.5
CDS GCA 72 bp CAAATTAGAATTCTAACCAAGGAGCTTCTTCAGTCTTaGTGGAGAGTAAAGTTCCCAGAGGGGCAGGGAAGA +
Preference number: 6 (lower is better)
Translates to: QIRILTKELLQS*WRVKFPEGQGR
Trigger: TCTTCCCTGCCCCTCTGGGAACTTTACTCTCCAGCAAGACTGAAGAAGCTCCTTGGTTAGAATTCTAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466998.1
CDS CAA 72 bp CCAATTCCCACCGTAAAGCACATTTCACCGAGTTCATaGAAGTCAGTGATCCTAACATCTATATTCCCTAAA +
Preference number: 6 (lower is better)
Translates to: PIPTVKHISPSS*KSVILTSIFPK
Trigger: TTTAGGGAATATAGATGTTAGGATCACTGACTTCAATGAACTCGGTGAAATGTGCTTTACGGTGGGAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480586.1
ENST00000481165.5