RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIMP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000035862

Ensembl transcript IDs: ENST00000262768.11, ENST00000536189.6, ENST00000585421.5, ENST00000586057.5, ENST00000592761.2

Found 775 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGTACCACGCACAGGAGCCGTCACTTC +
Preference number: 1 (lower is better)
Translates to: VGGLLMGPRCRETPA*GAPRRGTTHRSRHF
Trigger: GAAGTGACGGCTCCTGTGCGTGGTACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCGACATCGAGGACCCATAAGCAGGCCTCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 90 bp TCACCAGAGTCTCCTGGTCCCAGACTCACTGGGAGTGACCCAGGGTaGGAGGTGCCCAGCACTCAGCCATGCTTCCTGCAGGGAGGGTGG +
Preference number: 1 (lower is better)
Translates to: SPESPGPRLTGSDPG*EVPSTQPCFLQGGW
Trigger: CCACCCTCCCTGCAGGAAGCATGGCTGAGTGCTGGGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTGGGACCAGGAGACTCTGGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR GCA 90 bp TCCAGGCCCTGCCCTAACCCAGCTGGGAGATCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTGCCAAGGCAGGGACTGGGAGGGAAG +
Preference number: 1 (lower is better)
Translates to: SRPCPNPAGRSLSAA*LASVTVPRQGLGGK
Trigger: CTTCCCTCCCAGTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCAGCTGGGTTAGGGCAGGGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp AGCCCTGCCTGCACCCAAGGATCGAAGCCCCAGACACATAGTGCCTaGCAGAGGGAGGATGGGATGAGGACCTTGGACCCACGTCTCCCT +
Preference number: 1 (lower is better)
Translates to: SPACTQGSKPQTHSA*QREDGMRTLDPRLP
Trigger: AGGGAGACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTGGGGCTTCGATCCTTGGGTGCAGGCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR TCA 90 bp ACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATCAAGATCTGTGCTaGCCAGGTCCCGGTGGGCATGGGGGCTGCATGCCACTTGGGGGT +
Preference number: 1 (lower is better)
Translates to: TLPVCPRKGSHQDLC*PGPGGHGGCMPLGG
Trigger: ACCCCCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAGCACAGATCTTGATGACTTCCCTTTCTAGGGCAGACTGGGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 90 bp GAGCCCAGCCGGGCCCTGCACACAAGCCCGGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCTGATGCCAGAACAGGCAAGAAGCAA +
Preference number: 1 (lower is better)
Translates to: EPSRALHTSPDKAKL*NSIQVPDARTGKKQ
Trigger: TTGCTTCTTGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp AAAGGGAAGTCATCAAGATCTGTGCTGACCAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGGGGGTCAGGAGTCTTAACAGGTGCT +
Preference number: 1 (lower is better)
Translates to: KGKSSRSVLTRSRWA*GLHATWGSGVLTGA
Trigger: AGCACCTGTTAAGACTCCTGACCCCCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAGCACAGATCTTGATGACTTCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp TGTTGCTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTaGCCAAGGAACCCTAGGCTACAAGAGGATGACCGCCTTCACCAC +
Preference number: 1 (lower is better)
Translates to: CCSQAEPRGHRQLAI*PRNPRLQEDDRLHH
Trigger: GTGGTGAAGGCGGTCATCCTCTTGTAGCCTAGGGTTCCTTGGCCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR GCA 90 bp TTTTTCTGTCCTCAGGATGTGCAGATGGGGAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAGCAAAGCTGTGCAACTCAATCCAGG +
Preference number: 1 (lower is better)
Translates to: FFCPQDVQMGSPAGP*TQARIKQSCATQSR
Trigger: CCTGGATTGAGTTGCACAGCTTTGCTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAGGACAGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 90 bp CAGGAGCCGTCACTTCTCTTGATGCAGGCGAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: QEPSLLLMQAKNLAW*PLMFFSVTQSIQRH
Trigger: GTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 90 bp CTATGCTTAGCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: LCLAGVTCRKPRAER*LSVFEGGNTKPGRA
Trigger: TGCCCTCCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAAGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp GCACAGGAGCCGTCACTTCTCTTGATGCAGGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGG +
Preference number: 1 (lower is better)
Translates to: AQEPSLLLMQAKNLA*CPLMFFSVTQSIQR
Trigger: CCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTCCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR TCA 90 bp GAGGCGTGGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCT +
Preference number: 1 (lower is better)
Translates to: EAWKLQKTRAMSLSR*KGPGRPATQSCNDP
Trigger: AGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 90 bp AATAAAAGGGCCTGGGTTTCCTGGAGACAGATTCCAGCCCAGTGTTaGTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTGG +
Preference number: 1 (lower is better)
Translates to: NKRAWVSWRQIPAQC*SQAEPRGHRQLAIW
Trigger: CCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACACTGGGCTGGAATCTGTCTCCAGGAAACCCAGGCCCTTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR GCA 90 bp GCAACGACCCTCAAAAGTTTCTGCAAAATGCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGATCCCTAAGTGCTGCCTGCTTGGCA +
Preference number: 1 (lower is better)
Translates to: ATTLKSFCKMHISRP*PNPAGRSLSAACLA
Trigger: TGCCAAGCAGGCAGCACTTAGGGATCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTTTGAGGGTCGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 90 bp TGCACACAAGCCCGGATAAAGCAAAGCTGTGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCAAGAAGCAATGGCAACCGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: CTQARIKQSCATQSR*LMPEQARSNGNRSS
Trigger: GCTGCTGCGGTTGCCATTGCTTCTTGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATCCGGGCTTGTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR TCA 90 bp CTGGTCCATTATGACATCTTACCAACTTTAGGTCACTGTACAGCATaGAAACGCCCGTGGGGCAGGGGCCGATTCCTGGATACCCTCCCA +
Preference number: 1 (lower is better)
Translates to: LVHYDILPTLGHCTA*KRPWGRGRFLDTLP
Trigger: TGGGAGGGTATCCAGGAATCGGCCCCTGCCCCACGGGCGTTTTCATGCTGTACAGTGACCTAAAGTTGGTAAGATGTCATAATGGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 90 bp GGCCGCCAAGCTTCGGTTTCATTGCGTGTGTATGTTTACATAATGTaGCTGTATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAA +
Preference number: 1 (lower is better)
Translates to: GRQASVSLRVYVYIM*LYIVSLSLQHRWEE
Trigger: TTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATATACAGGCACATTATGTAAACATACACACGCAATGAAACCGAAGCTTGGCGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp TTCTCCATGGGACCATATTCTCTCTCCCCATACAGCTCCTTTTTCTaGAAGCTACAGGTAACAGAGCTGAATTCATGCTCTTACTCTCAA +
Preference number: 1 (lower is better)
Translates to: FSMGPYSLSPYSSFF*KLQVTELNSCSYSQ
Trigger: TTGAGAGTAAGAGCATGAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGAGAATATGGTCCCATGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR TCA 90 bp TCTGGTGGAGTTGTATATACTGAAATCACATGGACTGGTCCATTATaGCATCTTACCAACTTTAGGTCACTGTACAGCATGAAAACGCCC +
Preference number: 1 (lower is better)
Translates to: SGGVVYTEITWTGPL*HLTNFRSLYSMKTP
Trigger: GGGCGTTTTCATGCTGTACAGTGACCTAAAGTTGGTAAGATGTCATAATGGACCAGTCCATGTGATTTCAGTATATACAACTCCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp AGACCGAACCTACTCAAAGATCCTTTACTTTGCAATAATTTGAACTaGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAA +
Preference number: 1 (lower is better)
Translates to: RPNLLKDPLLCNNLN*RTKDGRRMKAKMLK
Trigger: TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATTATTGCAAAGTAAAGGATCTTTGAGTAGGTTCGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 90 bp TACATAATGTGCCTGTATATCGTCAGTTTATCTTTACAACACAGGTaGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCT +
Preference number: 1 (lower is better)
Translates to: YIMCLYIVSLSLQHR*EETRDSPYHYRESS
Trigger: AGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATATACAGGCACATTATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 90 bp AACAGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTaGAGGGCAGCCACCGGCCCCGGACAGCAGCCTCAGGACAGGACC +
Preference number: 2 (lower is better)
Translates to: NRQEAMATAAAREGT*RAATGPGQQPQDRT
Trigger: GGTCCTGTCCTGAGGCTGCTGTCCGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 90 bp GGGGGCGCCGCGCCGCGGTACCACGCACAGGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTC +
Preference number: 2 (lower is better)
Translates to: GGAAPRYHAQEPSLL*MQAKNLAWCPLMFF
Trigger: GAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTCCTGTGCGTGGTACCGCGGCGCGGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGCAGACTCACTGGGAGTaGCCCAGGGTGGGAGGTGCC +
Preference number: 2 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGQTHWE*PRVGGA
Trigger: GGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTG...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGTGGGCATGGGGGCTaGATGCCACTTGGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGGHGG*MPLGGQ
Trigger: CTGACCCCCAAGTGGCATGCAGCCCCCATGCCCACC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTCTCAGCCATGCTTCCTaGAGGGAGGGTGGGGATAGG +
Preference number: 2 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTLSHAS*REGGDR
Trigger: CCTATCCCCACCCTCCCTGCAGGAAGCATGGCTGAG...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGCTGGGAGCTCATGGTaGGCACCGGGGCGATGGGAG +
Preference number: 2 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEAGSSW*APGRWE
Trigger: CTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGC...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGGTGCTGGGAGCTCATaGTGGGCACCGGGGCGATGG +
Preference number: 2 (lower is better)
Translates to: RWLWKHFARPRPGRQASVGAGSS*WAPGRW
Trigger: CCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTGCTGGGAGCTCATaGTGGGCACCGGGGCGATGG +
Preference number: 2 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFGAGSS*WAPGRW
Trigger: CCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATCTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHLRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTTGGGGTGCAGTGGTGTaGTCTCAACTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTWGAVV*SQLTAT
Trigger: GGTTGCAGTGAGTTGAGATCACACCACTGCACCCCA...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: AGVTCRKPRAERWLSVFECPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAG +
Preference number: 2 (lower is better)
Translates to: AGVTCRKPRAERWLSVFESPAGP*TQARIK
Trigger: CTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCT...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGCTCGGCCTCCCAAAGTaGCGGGATTACAGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGLGLPK*RDYRRE
Trigger: CTCACGCCTGTAATCCCGGCACTTTGGGAGGCCGAG...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 90 bp GCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGCCTGGGAGGGCACAGCAAGACCCAG +
Preference number: 2 (lower is better)
Translates to: ASHAESPVQNDGCQS*REGTLSLGGHSKTQ
Trigger: CTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCCCAAAAAGACTCAGCTaGGGCTGGAACGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: RQEAMATAAAREGTLRAAPKRLS*GWNAAQ
Trigger: CTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTGG...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: PSQDERDLVGLLHSLATTCPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: RQEAMATAAAREGTLRAAGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCCTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 2 (lower is better)
Translates to: PSQDERDLVGLLHSLATTRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCTAGGGAAGGGACCTTaGGGGCAGCCACCGGCCCCG +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHLGKGP*GQPPAP
Trigger: CGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCTAGGGAAGGGACCTTaGGGGCAGCCACCGGCCCCG +
Preference number: 2 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSLGKGP*GQPPAP
Trigger: CGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGAGATCCCTAAGTGCTaGCTGCTTGGCATCTGTGAC +
Preference number: 2 (lower is better)
Translates to: RQEAMATAAAREGTLRAAEIPKC*LLGICD
Trigger: GTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCCGAGGTCATCGGCAACTAGCAATTTGGCCAAGGAACCCTAGGCTACAAGAGGCCACATCTAGGCGCTaGACTGCTCCAGCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: PRGHRQLAIWPRNPRLQEATSRR*TAPAVP
Trigger: AGGCACAGCTGGAGCAGTGCAGCGCCTAGATGTGGC...CTCTTGTAGCCTAGGGTTCCTTGGCCAAATTGCTAGTTGCCGATGACCTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR GCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCGAGGGGGTCTAACCTaGAGGGAAGCTGTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDRGGLT*REAVPC
Trigger: GCAGGGCACAGCTTCCCTGCAGGTTAGACCCCCTCG...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGGCTGGGAGCTCATGGTaGGCACCGGGGCGATGGGAG +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAAGSSW*APGRWE
Trigger: CTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGC...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATCTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHLWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTATGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVCPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 2 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACATTCCAGCCCAGTGTTaGTCGCAAGCCGAGCCCCGA +
Preference number: 2 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDIPAQC*SQAEPR
Trigger: TCGGGGCTCGGCTTGCGAGCAACACTGGGCTGGAAT...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGCAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 2 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSWAPGR*EHLPGA
Trigger: TGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATTCAAGAACTAGCCACTaGTTCCAGGCTGCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHSRTSH*FQAALG
Trigger: TCCAAGGGCAGCCTGGAACCAGTGGCTAGTTCTTGA...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 2 (lower is better)
Translates to: RWLWKHFARPRPGRQASVGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACTGTCATGTGCAGGGATaGCAGCCTCTCCCGAGACCC +
Preference number: 2 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDCHVQG*QPLPRP
Trigger: GGGTCTCGGGAGAGGCTGCCATCCCTGCACATGACA...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CAA 90 bp TACCACGCACAGGAGCCGTCACTTCTCTTGATGCAGGCGAAGAACTaGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATC +
Preference number: 2 (lower is better)
Translates to: YHAQEPSLLLMQAKN*AWCPLMFFSVTQSI
Trigger: GATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTCCTGTGCGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR TCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCCTGCTTGGCATCTGTaGCGGTGCCAAGGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAPAWHL*RCQGRD
Trigger: GTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGAGATCCCTAAGTGCTaGCTGCTTGGCATCTGTGAC +
Preference number: 2 (lower is better)
Translates to: RWLWKHFARPRPGRQASVEIPKC*LLGICD
Trigger: GTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCTGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 2 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGCCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSLRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGG +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHRSRWA*GLHATW
Trigger: CCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCT...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGG +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSRSRWA*GLHATW
Trigger: CCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCT...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TGCAGTTGGCCACAGGGGCGTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGAAAATGTCGGGAATGTTaGAAACAGCGTAAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: CSWPQGRWRPAYGSSMSRKCREC*KQRKAC
Trigger: GCAGGCCTTACGCTGTTTCCAACATTCCCGACATTT...TCTCGACATCGAGGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR TCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: RWLWKHFARPRPGRQASVRLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHCPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGC +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHLDFLL*LAGVTC
Trigger: GCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAG...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCAACCCAGGCTGGGGTaGAGTGGTGTGATCTCAACT +
Preference number: 2 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDQPRLG*SGVIST
Trigger: AGTTGAGATCACACCACTGCACCCCAGCCTGGGTTG...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSWAPGR*EHLPGA
Trigger: TGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCA...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSLRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGCAGGGGCCGATTCCTaGATACCCTCCCAGTCTGCC +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSAGADS*IPSQSA
Trigger: GGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTACTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 2 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLLTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAG +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSSPAGP*TQARIK
Trigger: CTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCT...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGCTCCTACTGCAGGTGTaGTTCCCTTTGGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: KNLAWCPLMFFSVTQSIQLLLQV*FPLGHL
Trigger: AAGATGGCCCAAAGGGAAGCACACCTGCAGTAGGAG...CTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGCTGGGAGCTCATGGTaGGCACCGGGGCGATGGGAG +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPIAGSSW*APGRWE
Trigger: CTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACATCAAGATCTGTGCTaGCCAGGTCCCGGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSHQDLC*PGPGGH
Trigger: ATGCCCACCGGGACCTGGTCAGCACAGATCTTGATG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFDKAKL*NSIQVP
Trigger: AGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTACAGGCGTTTGCACTTaGACATTTGTAGAAAATTCT +
Preference number: 2 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTTGVCT*TFVENS
Trigger: AGAATTTTCTACAAATGTGCAAGTGCAAACGCCTGT...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAATGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKWAPGR*EHLPGA
Trigger: TGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCA...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAACTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGGAAGCGAACAGGGGTaGGGTGTTATATGGGTTGGA +
Preference number: 2 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRGSEQG*GVIWVG
Trigger: TCCAACCCATATAACACCCCACCCCTGTTCGCTTCC...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGAGGAGCAGGTGTTCAGGTATTCTCAACACACAGACCCCACATAGACACCAACATCCTCCCAAGTTGCTaGGATCACAGGCGTGCACCA +
Preference number: 2 (lower is better)
Translates to: RGAGVQVFSTHRPHIDTNILPSC*DHRRAP
Trigger: TGGTGCACGCCTGTGATCCCAGCAACTTGGGAGGAT...GTTGGTGTCTATGTGGGGTCTGTGTGTTGAGAATACCTGAACACCTGCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: PSQDERDLVGLLHSLATTKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSLTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAG +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPISPAGP*TQARIK
Trigger: CTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGTTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGCTTTGGAAGCATTTTaGAAGACCACGCCCAGGCCG +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHALEAF*KTTPRP
Trigger: CGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCTGAAGGAATCCACCTaGATAGGCCACGCGTTCCAC +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHLKEST*IGHAFH
Trigger: GTGGAACGCGTGGCCTATGCAGGTGGATTCCTTCAG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 2 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTTGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLWAPGR*EHLPGA
Trigger: TGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCA...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGGTGCTGGGAGCTCATaGTGGGCACCGGGGCGATGG +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLGAGSS*WAPGRW
Trigger: CCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCCACGCGTTCCACTCTaGGTCAAATGCTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAPRVPL*VKCFHD
Trigger: ATCGTGGAAGCATTTGACCCAGAGTGGAACGCGTGG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CCCCGAGGTCATCGGCAACTAGCAATTTGGCCAAGGAACCCTAGGCTACAAGAGCTTTTGATTTCATGCTaGGCACAGAGGAGTTTCGCT +
Preference number: 2 (lower is better)
Translates to: PRGHRQLAIWPRNPRLQELLISC*AQRSFA
Trigger: AGCGAAACTCCTCTGTGCCCAGCATGAAATCAAAAG...CTCTTGTAGCCTAGGGTTCCTTGGCCAAATTGCTAGTTGCCGATGACCTCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHARLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSLWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp TTCATGCTGGGCACAGAGGAGTTTCGCTTAACATACGTGTGGCTGGAGACTATGACACCAACCCAGGTGTaGAAATGTCGGGAATGTTGG +
Preference number: 2 (lower is better)
Translates to: FMLGTEEFRLTYVWLETMTPTQV*KCRECW
Trigger: CCAACATTCCCGACATTTTCACACCTGGGTTGGTGT...CATAGTCTCCAGCCACACGTATGTTAAGCGAAACTCCTCTGTGCCCAGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR GCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACTGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CCCCGAGGTCATCGGCAACTAGCAATTTGGCCAAGGAACCCTAGGCTACAAGAGTTGCTTTTGATTTCATaGTGGGCACAGAGGAGTTTC +
Preference number: 2 (lower is better)
Translates to: PRGHRQLAIWPRNPRLQELLLIS*WAQRSF
Trigger: GAAACTCCTCTGTGCCCAGCATGAAATCAAAAGCAA...CTCTTGTAGCCTAGGGTTCCTTGGCCAAATTGCTAGTTGCCGATGACCTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAACAGGCAAGAAGCAATaGCAACCGCAGCAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSTGKKQ*QPQQLG
Trigger: CCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCTGT...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHLRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGGGTGTTATATGGGTTaGAGGGGTCTGGTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHGCYMG*RGLVEL
Trigger: CAACTCCACCAGACCCCTCCAACCCATATAACACCC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACCACGCGTTCCACTCTaGGTCAAATGCTTCCACGAT +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSPRVPL*VKCFHD
Trigger: ATCGTGGAAGCATTTGACCCAGAGTGGAACGCGTGG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 90 bp AGCATCAGAGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTaGTGTGTTCCCAGCACCGGAAGGTCTCAGACTTCATATTCCAGC +
Preference number: 2 (lower is better)
Translates to: SIRDMRSLLVNFQQL*CVPSTGRSQTSYSS
Trigger: GCTGGAATATGAAGTCTGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCTCTGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 2 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAAGGAGTCTTAACAGGTaGTTTGGGGTTGCCGCTGAA +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSRSLNR*FGVAAE
Trigger: TTCAGCGGCAACCCCAAAGCACCTGTTAAGACTCCT...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 2 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHRIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATATTCCTCCTGCAAGCTaGGGAGCATGTGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHIPPAS*GACGRG
Trigger: CCCCCGCCCACATGCTCCCCAGCTTGCAGGAGGAAT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACTATTGTGAAGGTATTTaGGCGGCTTCCTCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHYCEGI*AASSVS
Trigger: GCTGACAGAGGAAGCCGCTCAAATACCTTCACAATA...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCTCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTG +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPISLSAA*LASVTV
Trigger: CACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGA...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGAGATCCCTAAGTGCTaGCTGCTTGGCATCTGTGAC +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSEIPKC*LLGICD
Trigger: GTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSLAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 2 (lower is better)
Translates to: RWLWKHFARPRPGRQASVRIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPIPRAER*LSVFEG
Trigger: TCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAGGGTGGGGTGTTATATaGGTTGGAGGGGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKGWGVI*VGGVWW
Trigger: CCACCAGACCCCTCCAACCCATATAACACCCCACCC...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTAAGACGGGAGACGAATaGAAGCAAAGATGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSKTGDE*KQRCSK
Trigger: CTTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTT...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLLTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPIATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSDKAKL*NSIQVP
Trigger: AGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCTCAAGAACTAGCCACTaGTTCCAGGCTGCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPISRTSH*FQAALG
Trigger: TCCAAGGGCAGCCTGGAACCAGTGGCTAGTTCTTGA...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 90 bp AAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTTCATaGCGTGTGTATGTTTACATAATGTGCCTGTATATCGTCAGTTTA +
Preference number: 2 (lower is better)
Translates to: KHFARPRPGRQASVS*RVYVYIMCLYIVSL
Trigger: TAAACTGACGATATACAGGCACATTATGTAAACATACACACGCAATGAAACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCCAAAAAGACTCAGCTaGGGCTGGAACGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLPKRLS*GWNAAQ
Trigger: CTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTGG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATGGAGTTGTATATACTaGAATCACATGGACTGGTCC +
Preference number: 2 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSWSCIY*NHMDWS
Trigger: GGACCAGTCCATGTGATTTCAGTATATACAACTCCA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAATTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKLAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGA +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHPRAER*LSVFEG
Trigger: TCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGTGCAATAATTTGAACTaGAGAACCAAAGACGGGAGA +
Preference number: 2 (lower is better)
Translates to: CPRTERLLKNDTKHQRHACNNLN*RTKDGR
Trigger: TCTCCCGTCTTTGGTTCTCCAGTTCAAATTATTGCA...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKRLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGAGATCCCTAAGTGCTaGCTGCTTGGCATCTGTGAC +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHEIPKC*LLGICD
Trigger: GTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATTGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSDKAKL*NSIQVP
Trigger: AGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 2 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFRIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCCTTACTATGCTTAGCTaGCGTCACATGCAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: GGRKQEILLIITEKVLPILTMLS*RHMQKA
Trigger: GGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAG...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACTCTTTACAACACAGGTaGGAGGAAACAAGAGATTCT +
Preference number: 2 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHSLQHR*EETRDS
Trigger: AGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGA...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp CTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCATGCTCTTACTCTCAAGACAGCCTTACTCTTaGGATGACTCTACCTTCCCA +
Preference number: 2 (lower is better)
Translates to: LLFLEATGNRAEFMLLLSRQPYS*DDSTFP
Trigger: TGGGAAGGTAGAGTCATCCCAAGAGTAAGGCTGTCT...TGAGAGTAAGAGCATGAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR TCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAGGAGTCTTAACAGGTaGTTTGGGGTTGCCGCTGAA +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHRSLNR*FGVAAE
Trigger: TTCAGCGGCAACCCCAAAGCACCTGTTAAGACTCCT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 2 (lower is better)
Translates to: INRIDGAPSRTSHWFQAARIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAACCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGC +
Preference number: 2 (lower is better)
Translates to: ILSCLQDENRRRELCLEHLDFLL*LAGVTC
Trigger: GCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCTTACTATGCTTAGCTaGCGTCACATGCAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLLTMLS*RHMQKA
Trigger: GGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGGTTCACCTATCATCTaGGAATTCACCTTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: HRWEETRDSPYHYRESSSGSPII*EFTFRK
Trigger: TTTTCTAAAGGTGAATTCTCAGATGATAGGTGAACC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAAACACAGCACAGGAATaGTTACAGCTGATGTCAAAA +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKNTAQE*LQLMSK
Trigger: TTTTGACATCAGCTGTAATCATTCCTGTGCTGTGTT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR GCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAAGAAGTTGGTATATCTaGAACTCAGGTTCACCTATC +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKRSWYI*NSGSPI
Trigger: GATAGGTGAACCTGAGTTGCAGATATACCAACTTCT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR TCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAGGTTCACCTATCATCTaGGAATTCACCTTTAGAAAA +
Preference number: 2 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKGSPII*EFTFRK
Trigger: TTTTCTAAAGGTGAATTCTCAGATGATAGGTGAACC...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp TCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCAGGGAGTGCAGAGGCG +
Preference number: 3 (lower is better)
Translates to: SGAGSSWWAPGR*EHLPGAGSAEA
Trigger: CGCCTCTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 72 bp GGGACTGGGAGGGAAGCCGCGTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCCCAGACACATAGTGCC +
Preference number: 3 (lower is better)
Translates to: GTGREAACPSPA*TQGSKPQTHSA
Trigger: GGCACTATGTGTCTGGGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACACGCGGCTTCCCTCCCAGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp CTGCTTATGGGTCCTCGATGTCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGTACCACGCACAGGAGC +
Preference number: 3 (lower is better)
Translates to: LLMGPRCRETPA*GAPRRGTTHRS
Trigger: GCTCCTGTGCGTGGTACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCGACATCGAGGACCCATAAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 72 bp ATCATGGGGCAGCGCGTGATCTGTCATGTGCAGGGATaGCAGCCTCTCCCGAGACCCACGGTTCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: IMGQRVICHVQG*QPLPRPTVPAG
Trigger: CCCTGCAGGAACCGTGGGTCTCGGGAGAGGCTGCCATCCCTGCACATGACAGATCACGCGCTGCCCCATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR GCA 72 bp TGCCCTAACCCAGCTGGGAGATCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTGCCAAGGCAGGGACTG +
Preference number: 3 (lower is better)
Translates to: CPNPAGRSLSAA*LASVTVPRQGL
Trigger: CAGTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCAGCTGGGTTAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 72 bp CCTCAGGATGTGCAGATGGGGAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAGCAAAGCTGTGCAACT +
Preference number: 3 (lower is better)
Translates to: PQDVQMGSPAGP*TQARIKQSCAT
Trigger: AGTTGCACAGCTTTGCTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp TGCACCCAAGGATCGAAGCCCCAGACACATAGTGCCTaGCAGAGGGAGGATGGGATGAGGACCTTGGACCCA +
Preference number: 3 (lower is better)
Translates to: CTQGSKPQTHSA*QREDGMRTLDP
Trigger: TGGGTCCAAGGTCCTCATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTGGGGCTTCGATCCTTGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp TCATCAAGATCTGTGCTGACCAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGGGGGTCAGGAGTCTTA +
Preference number: 3 (lower is better)
Translates to: SSRSVLTRSRWA*GLHATWGSGVL
Trigger: TAAGACTCCTGACCCCCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAGCACAGATCTTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATCTAAGTGCTGCCTGCTaGGCATCTGTGACGGTGCCA +
Preference number: 3 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHLSAAC*ASVTVP
Trigger: TGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAG...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGAAGCCACACAGGCGTTaGCACTTGCACATTTGTAGA +
Preference number: 3 (lower is better)
Translates to: ALVRGGDVARDHGAARDLKPHRR*HLHICR
Trigger: TCTACAAATGTGCAAGTGCAAACGCCTGTGTGGCTT...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR GCA 72 bp CGGGCCCTGCACACAAGCCCGGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCTGATGCCAGAACAGGC +
Preference number: 3 (lower is better)
Translates to: RALHTSPDKAKL*NSIQVPDARTG
Trigger: GCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATCCGGGCTTGTGTGCAGGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp CTGGTCCCAGACTCACTGGGAGTGACCCAGGGTGGGAGGTGCCCAGCACTCAGCCACAGGCGTTTGCACTaGCACATTTGTAGAAAATTC +
Preference number: 3 (lower is better)
Translates to: LVPDSLGVTQGGRCPALSHRRLH*HICRKF
Trigger: GAATTTTCTACAAATGTGCAAGTGCAAACGCCTGTG...GCTGAGTGCTGGGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTGGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 72 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCT +
Preference number: 3 (lower is better)
Translates to: AGVTCRKPRAER*LSVFEGGNTKP
Trigger: AGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp GGGGGACACAGCAACAATAAAAGGGCCTGGGTTTCCTaGAGACAGATTCCAGCCCAGTGTTGCTCGCAAGCC +
Preference number: 3 (lower is better)
Translates to: GGHSNNKRAWVS*RQIPAQCCSQA
Trigger: GGCTTGCGAGCAACACTGGGCTGGAATCTGTCTCCAGGAAACCCAGGCCCTTTTATTGTTGCTGTGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 72 bp CTGCCCTCTGGGGGACACAGCAACAATAAAAGGGCCTaGGTTTCCTGGAGACAGATTCCAGCCCAGTGTTGC +
Preference number: 3 (lower is better)
Translates to: LPSGGHSNNKRA*VSWRQIPAQCC
Trigger: GCAACACTGGGCTGGAATCTGTCTCCAGGAAACCCAGGCCCTTTTATTGTTGCTGTGTCCCCCAGAGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 72 bp CCGTCACTTCTCTTGATGCAGGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCC +
Preference number: 3 (lower is better)
Translates to: PSLLLMQAKNLA*CPLMFFSVTQS
Trigger: GGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CCA 72 bp CAAAAAGACTCAGCTGAGGCTGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTTCTACAAGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: QKDSAEAGTQLS*GFSLPFLQGSE
Trigger: CTCTGAGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp TCAAAGGCTCTGTCCCCAGCCAGACAGCCTTACTCTTaGGATGACTCTACCTTCCCAGAGCCTGGTCTTAGA +
Preference number: 3 (lower is better)
Translates to: SKALSPARQPYS*DDSTFPEPGLR
Trigger: TCTAAGACCAGGCTCTGGGAAGGTAGAGTCATCCCAAGAGTAAGGCTGTCTGGCTGGGGACAGAGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR GCA 72 bp GCCCGGATAAAGCAAAGCTGTGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCAAGAAGCAATGGCAAC +
Preference number: 3 (lower is better)
Translates to: ARIKQSCATQSR*LMPEQARSNGN
Trigger: GTTGCCATTGCTTCTTGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATCCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 72 bp TCACTTCTCTTGATGCAGGCGAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCTGTGACCCAGTCCATC +
Preference number: 3 (lower is better)
Translates to: SLLLMQAKNLAW*PLMFFSVTQSI
Trigger: GATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CAA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCCAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 3 (lower is better)
Translates to: RQEAMATAAAREGTLRAAQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGGCTTTGGAAGCATTTaGCAAGACCACGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHGFGSI*QDHAQA
Trigger: GGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGACAGGTGCTTTGGGGTaGCCGCTGAATAGAACAGGC +
Preference number: 3 (lower is better)
Translates to: CPRTERLLKNDTKHQRHATGALG*PLNRTG
Trigger: GCCTGTTCTATTCAGCGGCAACCCCAAAGCACCTGT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGAGGAAAAACTTGCTTTaGATTTCATGCTGGGCACAG +
Preference number: 3 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGRKNLL*ISCWAQ
Trigger: CTGTGCCCAGCATGAAATCAAAAGCAAGTTTTTCCT...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR-3UTR CAA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 3 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGC +
Preference number: 3 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLDGCQS*REGTLS
Trigger: GCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATC...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGC +
Preference number: 3 (lower is better)
Translates to: CPRTERLLKNDTKHQRHADGCQS*REGTLS
Trigger: GCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATC...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR TCA 72 bp TATGACATCTTACCAACTTTAGGTCACTGTACAGCATaGAAACGCCCGTGGGGCAGGGGCCGATTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: YDILPTLGHCTA*KRPWGRGRFLD
Trigger: ATCCAGGAATCGGCCCCTGCCCCACGGGCGTTTTCATGCTGTACAGTGACCTAAAGTTGGTAAGATGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 72 bp CAAAATCCTTCCCTTCCTAGGCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGCAGAAAGCCCCGTGCA +
Preference number: 3 (lower is better)
Translates to: QNPSLPRLDFLL*LAGVTCRKPRA
Trigger: TGCACGGGGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAGCCTAGGAAGGGAAGGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCAGGCTAAGGTGGCTTaGGAAGCATTTTGCAAGACC +
Preference number: 3 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAQAKVA*EAFCKT
Trigger: GGTCTTGCAAAATGCTTCCAAAGCCACCTTAGCCTG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 3 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 3 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGGCTAAGGTGGCTTaGGAAGCATTTTGCAAGACC +
Preference number: 3 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSQAKVA*EAFCKT
Trigger: GGTCTTGCAAAATGCTTCCAAAGCCACCTTAGCCTG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAACTTTCAACAACTCTaGTGTGTTCCCAGCACCGGA +
Preference number: 3 (lower is better)
Translates to: CPRTERLLKNDTKHQRHANFQQL*CVPSTG
Trigger: TCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTCAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 3 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 3 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGCTTTGGAAGCATTTaGCAAGACCACGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGFGSI*QDHAQA
Trigger: GGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 3 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 3 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 3 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR TCA 72 bp ATATGGGTTGGAGGGGTCTGGTGGAGTTGTATATACTaGAATCACATGGACTGGTCCATTATGACATCTTAC +
Preference number: 3 (lower is better)
Translates to: IWVGGVWWSCIY*NHMDWSIMTSY
Trigger: GTAAGATGTCATAATGGACCAGTCCATGTGATTTCAGTATATACAACTCCACCAGACCCCTCCAACCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR GCA 72 bp TTGATAATACTGTTTATTGTCCACGGACCGAGCGATTaGTCAAGAATGATACAAAGCATCAGAGACATGCGC +
Preference number: 3 (lower is better)
Translates to: LIILFIVHGPSD*SRMIQSIRDMR
Trigger: GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACAATAAACAGTATTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 3 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 3 (lower is better)
Translates to: GGRKQEILLIITEKVLPIKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 3 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CCA 72 bp TGCCTGTATATCGTCAGTTTATCTTTACAACACAGGTaGGAGGAAACAAGAGATTCTCCTTATCATTACCGA +
Preference number: 3 (lower is better)
Translates to: CLYIVSLSLQHR*EETRDSPYHYR
Trigger: TCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATATACAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCAAGCTTCGGTTTCATaGCGTGTGTATGTTTACATA +
Preference number: 3 (lower is better)
Translates to: ILSCLQDENRRRELCLEHQASVS*RVYVYI
Trigger: TATGTAAACATACACACGCAATGAAACCGAAGCTTG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR TCA 72 bp GTTGTATATACTGAAATCACATGGACTGGTCCATTATaGCATCTTACCAACTTTAGGTCACTGTACAGCATG +
Preference number: 3 (lower is better)
Translates to: VVYTEITWTGPL*HLTNFRSLYSM
Trigger: CATGCTGTACAGTGACCTAAAGTTGGTAAGATGTCATAATGGACCAGTCCATGTGATTTCAGTATATACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCTAGGGAAGGGACCTTaGGGGCAGCCACCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARLGKGP*GQPPAP
Trigger: CGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGGGTGGGCATGGGGGCTaGATGCCACTTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARGGHGG*MPLGGQ
Trigger: CTGACCCCCAAGTGGCATGCAGCCCCCATGCCCACC...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARLRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARCPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWRETPA*GAPRRG
Trigger: ACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCG...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGGCAGGGGCCGATTCCTaGATACCCTCCCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARAGADS*IPSQSA
Trigger: GGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGC...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGCAGACTCACTGGGAGTaGCCCAGGGTGGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ALVRGGDVARDHGAARDLQTHWE*PRVGGA
Trigger: GGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTG...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GCCTCCAGACATCCCCTGTCAGAGATGTGCCTCAGGGCTCTCCAGGGACCAGGGGCACTGCTCCAGCTGTaGCTGGCACAACCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: ASRHPLSEMCLRALQGPGALLQL*LAQPPG
Trigger: GCCCGGAGGTTGTGCCAGGCACAGCTGGAGCAGTGC...CCCTGGTCCCTGGAGAGCCCTGAGGCACATCTCTGACAGGGGATGTCTGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp CTGGTCCCAGACTCACTGGGAGTGACCCAGGGTGGGAGGTGCCCAGCACTCAGCTCCCTGCCGTCCATCTaGAGACACTGGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LVPDSLGVTQGGRCPALSSLPSI*RHWEEA
Trigger: CGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGA...GCTGAGTGCTGGGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTGGGACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGCACCGGGGAGCAGCTaGAGGCGTCGGCCGGGCGAA +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFAPGSS*RRRPGE
Trigger: TTCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGCTGGGAGCTCATGGTaGGCACCGGGGCGATGGGAG +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAAAGSSW*APGRWE
Trigger: CTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWRSRWA*GLHATW
Trigger: CCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCT...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 72 bp GCGCCGCGGTACCACGCACAGGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: APRYHAQEPSLL*MQAKNLAWCPL
Trigger: CAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTCCTGTGCGTGGTACCGCGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCCAAAAAGACTCAGCTaGGGCTGGAACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARPKRLS*GWNAAQ
Trigger: CTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTGG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTCTAGGGAAGGGACCTTaGGGGCAGCCACCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKALGKGP*GQPPAP
Trigger: CGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAG...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCTGAAGGAATCCACCTaGATAGGCCACGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARLKEST*IGHAFH
Trigger: GTGGAACGCGTGGCCTATGCAGGTGGATTCCTTCAG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGWAPGR*EHLPGA
Trigger: TGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATTGGGCACCGGGGCGATaGGAGCACTTGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHWAPGR*EHLPGA
Trigger: TGCCCCTGGCAAGTGCTCCCATCGCCCCGGTGCCCA...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGTCCCAGCCCCCGGCATaGCGTCTCCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGSQPPA*RLLLQA
Trigger: AGCCTGGAGGAGGAGACGCCATGCCGGGGGCTGGGA...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp CCCGGCCTCCAGACATCCCCTGTCAGAGATGTGCCTCAGGGCTCTCCAGGGACCTCCATCTGGAGACACTaGGAGGAGGCGATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGLQTSPVRDVPQGSPGTSIWRH*EEAMLQ
Trigger: CTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGA...GGTCCCTGGAGAGCCCTGAGGCACATCTCTGACAGGGGATGTCTGGAGGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTAGAATGGCCTCAGCTTaGCCCTGCCCTCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTRMASA*PCPLGD
Trigger: GTCCCCCAGAGGGCAGGGCCAAGCTGAGGCCATTCT...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCCTCACCCTCCTCACCTaGCCCGCTCGGCCGCGCAAA +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFLTLLT*PARPRK
Trigger: TTTGCGCGGCCGAGCGGGGCAGGTGAGGAGGGTGAG...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR GCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAACPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGGAGATCCCTAAGTGCTaGCTGCTTGGCATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALAREIPKC*LLGICD
Trigger: GTCACAGATGCCAAGCAGGCAGCACTTAGGGATCTC...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTCAGACAGCAGCAAGGTaGGAGACGGGCAAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTQTAAR*ETGKGH
Trigger: ATGCCCCTTGCCCGTCTCGCACCTTGCTGCTGTCTG...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GCCCAGTGTTGCTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTGGACTGGGAGGAGGCGATaGTCCAGCAGAGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: AQCCSQAEPRGHRQLAIWTGRRR*SSRGRT
Trigger: GGTCCTGCCTCTGCTGGAGCATCGCCTCCTCCCAGT...CCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACACTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp TGCAGTTGGCCACAGGGGCGTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGACCCAGCACTCAGCCATaGTTCCTGCAGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CSWPQGRWRPAYGSSMSRPSTQP*FLQGGW
Trigger: CCACCCTCCCTGCAGGAAGCATGGCTGAGTGCTGGG...TCTCGACATCGAGGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARPIWYL*FRLFFW
Trigger: CCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGCTGGGAGCTCATGGTaGGCACCGGGGCGATGGGAG +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAAGSSW*APGRWE
Trigger: CTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTCTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCCTGCTTGGCATCTGTaGCGGTGCCAAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGPAWHL*RCQGRD
Trigger: GTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGCAGTTGGCCACAGGGGCGTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGATCTCCTCCTCCAGGCTaGGAGATGATGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CSWPQGRWRPAYGSSMSRSPPPG*EMMPSL
Trigger: GAGGCTGGGCATCATCTCTCAGCCTGGAGGAGGAGA...TCTCGACATCGAGGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACGGGCAAGGGGCATGGTaGTCCCAGCCCCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDGQGAW*SQPPAW
Trigger: CCATGCCGGGGGCTGGGATCACCATGCCCCTTGCCC...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGTCACAGAGGGTGATGTaGATCTTGCCGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWSQRVM*ILPSPS
Trigger: CGAGGGGGACGGCAAGATGCACATCACCCTCTGTGA...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTTCTTCTTCTGGGTGGTaGTCAGGGTGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTSSSGW*SGCPRA
Trigger: TGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGA...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATTGTCCCAGCCCTGCCTaGACCCAAGGATCGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHCPSPA*TQGSKP
Trigger: GGGCTTCGATCCTTGGGTGCAGGCAGGGCTGGGACA...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGCATGGGGGCTGCATaGCACTTGGGGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGMGAA*HLGVRS
Trigger: ACTCCTGACCCCCAAGTGGCATGCAGCCCCCATGCC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGCAACCCAGGCTGGGGTaGAGTGGTGTGATCTCAACT +
Preference number: 4 (lower is better)
Translates to: ALVRGGDVARDHGAARDLQPRLG*SGVIST
Trigger: AGTTGAGATCACACCACTGCACCCCAGCCTGGGTTG...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGCGAGGGGGTCTAACCTaGAGGGAAGCTGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGRGGLT*REAVPC
Trigger: GCAGGGCACAGCTTCCCTGCAGGTTAGACCCCCTCG...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDRETPA*GAPRRG
Trigger: ACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCG...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGTTGGAGGCCTGCTTATaGGTCCTCGATGTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARLEACL*VLDVEK
Trigger: TTTCTCGACATCGAGGACCCATAAGCAGGCCTCCAA...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCGGTGCTGGGAGCTCATaGTGGGCACCGGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTGAGSS*WAPGRW
Trigger: CCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACC...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATATTCCTCCTGCAAGCTaGGGAGCATGTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHIPPAS*GACGRG
Trigger: CCCCCGCCCACATGCTCCCCAGCTTGCAGGAGGAAT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTCTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKALRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVRSRWA*GLHATW
Trigger: CCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGTCACTGTACAGCATaGAAACGCCCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGHCTA*KRPWGR
Trigger: CCTGCCCCACGGGCGTTTTCATGCTGTACAGTGACC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATTCTCCTCCTCCAGGCTaGGAGATGATGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHSPPPG*EMMPSL
Trigger: GAGGCTGGGCATCATCTCTCAGCCTGGAGGAGGAGA...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585421.5
CDS-3UTR GCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGGCATGGGGGCTGCATaGCACTTGGGGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVGMGAA*HLGVRS
Trigger: ACTCCTGACCCCCAAGTGGCATGCAGCCCCCATGCC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCACGGACCGAGCGATTaGTCAAGAATGATACAAAGC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARHGPSD*SRMIQS
Trigger: GCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CCCGGCCTCCAGACATCCCCTGTCAGAGATGTGCCTCAGGGCTCTCCAGGGACCGTGATCTCAACTCACTaGAACCTCCACCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PGLQTSPVRDVPQGSPGTVISTH*NLHLPH
Trigger: ATGTGGGAGGTGGAGGTTGCAGTGAGTTGAGATCAC...GGTCCCTGGAGAGCCCTGAGGCACATCTCTGACAGGGGATGTCTGGAGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALVRGGDVARDHGAARDLPIWYL*FRLFFW
Trigger: CCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGG...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRRETPA*GAPRRG
Trigger: ACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCG...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTATTCCTCCTGCAAGCTaGGGAGCATGTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAIPPAS*GACGRG
Trigger: CCCCCGCCCACATGCTCCCCAGCTTGCAGGAGGAAT...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGGGGCTGCATGCCACTTaGGGGTCAGGAGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWGLHAT*GSGVLT
Trigger: TGTTAAGACTCCTGACCCCCAAGTGGCATGCAGCCC...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCCCAGTGTTGCTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTGGAGGGCCTGGGTTTCCTaGAGACAGATTCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AQCCSQAEPRGHRQLAIWRAWVS*RQIPAQ
Trigger: CTGGGCTGGAATCTGTCTCCAGGAAACCCAGGCCCT...CCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACACTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CAA 72 bp GCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGCCTGGGAGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: AESPVQNDGCQS*REGTLSLGGHS
Trigger: GCTGTGCCCTCCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTAGGGAAGGGACCTTaGGGGCAGCCACCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALGKGP*GQPPAP
Trigger: CGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGGGCAAGGGGCATGGTaGTCCCAGCCCCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAGQGAW*SQPPAW
Trigger: CCATGCCGGGGGCTGGGATCACCATGCCCCTTGCCC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGTCACAGAGGGTGATGTaGATCTTGCCGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGSQRVM*ILPSPS
Trigger: CGAGGGGGACGGCAAGATGCACATCACCCTCTGTGA...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTCTTCTTCTGGGTGGTaGTCAGGGTGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGSSSGW*SGCPRA
Trigger: TGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGGGCGTTGGAGGCCTaGTTATGGGTCCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFGALEA*LWVLDV
Trigger: GACATCGAGGACCCATAAGCAGGCCTCCAACGCCCC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGCAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCCTGAAGGAATCCACCTaGATAGGCCACGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAALKEST*IGHAFH
Trigger: GTGGAACGCGTGGCCTATGCAGGTGGATTCCTTCAG...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGGAGACATGCGCAGTCTaGTTGTCAACTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARETCAV*LSTFNN
Trigger: GTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCTC...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGGCTCTTCTTCTGGGTaGTGCTCAGGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAGSSSG*CSGCPR
Trigger: CCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGCTCTTCTTCTGGGTaGTGCTCAGGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEGSSSG*CSGCPR
Trigger: CCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCC...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCCCAGTGTTGCTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTGGTTCAGGCTCTTCTTCTaGGTGGTGCTCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AQCCSQAEPRGHRQLAIWFRLFF*VVLRVS
Trigger: GGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAA...CCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACACTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWPIWYL*FRLFFW
Trigger: CCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGG...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGHSQPI*YLWFRL
Trigger: GAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGTTGGAGGCCTGCTTATaGGTCCTCGATGTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: ALVRGGDVARDHGAARDLLEACL*VLDVEK
Trigger: TTTCTCGACATCGAGGACCCATAAGCAGGCCTCCAA...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGGTGCTGGGAGCTCATaGTGGGCACCGGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRGAGSS*WAPGRW
Trigger: CCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACC...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAAGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACGCCTGCGGGAGGTGCTaGGGGGTTACAGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDACGRC*GVTDSS
Trigger: GCTGCTGTCTGTAACCCCCCAGCACCTCCCGCAGGC...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTCCTGCTTGGCATCTGTaGCGGTGCCAAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCPAWHL*RCQGRD
Trigger: GTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGG...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACTAGGGAAGGGACCTTaGGGGCAGCCACCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSLGKGP*GQPPAP
Trigger: CGGGGCCGGTGGCTGCCCTCAAGGTCCCTTCCCTAG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGTGGAGTTGTATATACTaGAATCACATGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARWSCIY*NHMDWS
Trigger: GGACCAGTCCATGTGATTTCAGTATATACAACTCCA...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGTGCCACTATTTATTGTaGAGGTATTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARCHYLL*RYLSGF
Trigger: GAAGCCGCTCAAATACCTTCACAATAAATAGTGGCA...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCTCACAGAGGGTGATGTaGATCTTGCCGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFSQRVM*ILPSPS
Trigger: CGAGGGGGACGGCAAGATGCACATCACCCTCTGTGA...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGTCTTCTTCTGGGTGGTaGTCAGGGTGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AGVTCRKPRAERWLSVFESSSGW*SGCPRA
Trigger: TGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGA...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCGGCGATGGGAGCACTTaGCAGGGGCAGGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFGDGST*QGQGVQ
Trigger: CTGCACTCCCTGCCCCTGGCAAGTGCTCCCATCGCC...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAAATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGAGGAGTCTTAACAGGTaGTTTGGGGTTGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWRSLNR*FGVAAE
Trigger: TTCAGCGGCAACCCCAAAGCACCTGTTAAGACTCCT...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCTGAAGGAATCCACCTaGATAGGCCACGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGLKEST*IGHAFH
Trigger: GTGGAACGCGTGGCCTATGCAGGTGGATTCCTTCAG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGATCAAGCAGCAAGGTaGGAGACGGGCAAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFDQAAR*ETGKGH
Trigger: ATGCCCCTTGCCCGTCTCGCACCTTGCTGCTTGATC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585421.5
CDS-3UTR GCA 90 bp CCCCGAGGTCATCGGCAACTAGCAATTTGGCCAAGGAACCCTAGGCTACAAGAGATTCCAGCCCAGTGTTaGTCGCAAGCCGAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: PRGHRQLAIWPRNPRLQEIPAQC*SQAEPR
Trigger: TCGGGGCTCGGCTTGCGAGCAACACTGGGCTGGAAT...CTCTTGTAGCCTAGGGTTCCTTGGCCAAATTGCTAGTTGCCGATGACCTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVHSQPI*YLWFRL
Trigger: GAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTG...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAAAKNLA*CPLMFF
Trigger: GAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSRETPA*GAPRRG
Trigger: ACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGCAGTTGGCCACAGGGGCGTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGAAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: CSWPQGRWRPAYGSSMSRKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...TCTCGACATCGAGGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGCTGGGAGCTCATGGTaGGCACCGGGGCGATGGGAG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAAGSSW*APGRWE
Trigger: CTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCTCAAGAACTAGCCACTaGTTCCAGGCTGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAASRTSH*FQAALG
Trigger: TCCAAGGGCAGCCTGGAACCAGTGGCTAGTTCTTGA...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTACTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVLRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGPRAER*LSVFEG
Trigger: TCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGGTGGGGTGTTATATaGGTTGGAGGGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFGWGVI*VGGVWW
Trigger: CCACCAGACCCCTCCAACCCATATAACACCCCACCC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCGGCCTCCAGACATCCCCTGTCAGAGATGTGCCTCAGGGCTCTCCAGGGACCCCGCCTTCACCACCGTaGAAAGAAAAAGGAAAAACT +
Preference number: 4 (lower is better)
Translates to: PGLQTSPVRDVPQGSPGTPPSPP*KEKGKT
Trigger: AGTTTTTCCTTTTTCTTTCCACGGTGGTGAAGGCGG...GGTCCCTGGAGAGCCCTGAGGCACATCTCTGACAGGGGATGTCTGGAGGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATAGCCGTCACTTCTCTTaGTGCAGGCGAAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHSRHFS*CRRRTW
Trigger: CCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGAGCCGTCACTTCTCTTaGTGCAGGCGAAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGSRHFS*CRRRTW
Trigger: CCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCT...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTAGAGGGAGGATGGGATaGGGACCTTGGACCCACGTC +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCRGRMG*GPWTHV
Trigger: GACGTGGGTCCAAGGTCCTCATCCCATCCTCCCTCT...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCCCAAAAAGACTCAGCTaGGGCTGGAACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFPKRLS*GWNAAQ
Trigger: CTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTGG...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGCAGTTGGCCACAGGGGCGTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGAACACCAACCCAGGTGTaGAAATGTCGGGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: CSWPQGRWRPAYGSSMSRTPTQV*KCRECW
Trigger: CCAACATTCCCGACATTTTCACACCTGGGTTGGTGT...TCTCGACATCGAGGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCTCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTG +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFSLSAA*LASVTV
Trigger: CACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGA...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAG +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFSPAGP*TQARIK
Trigger: CTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCT...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAG +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVSPAGP*TQARIK
Trigger: CTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCT...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATTTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHLAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGCTTTGGAAGCATTTTaGAAGACCACGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEALEAF*KTTPRP
Trigger: CGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGC...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGCACGGACCGAGCGATTaGTCAAGAATGATACAAAGC +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWHGPSD*SRMIQS
Trigger: GCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTG...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCTCAGCCATGCTTCCTaGAGGGAGGGTGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDLSHAS*REGGDR
Trigger: CCTATCCCCACCCTCCCTGCAGGAAGCATGGCTGAG...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACGGCTCTTCTTCTGGGTaGTGCTCAGGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDGSSSG*CSGCPR
Trigger: CCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCC...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTTTCAGGCTCTTCTTCTaGGTGGTGCTCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAFRLFF*VVLRVS
Trigger: GGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAA...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGAKNLA*CPLMFF
Trigger: GAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGC...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTGGCCACAGGGGCGTTaGAGGCCTGCTTATGGGTCC +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRWPQGR*RPAYGS
Trigger: GGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCA...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTCAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTCAGGATGTGCAGATaGGGAGCCCAGCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALRMCR*GAQPGP
Trigger: AGGGCCCGGCTGGGCTCCCCATCTGCACATCCTGAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAPRAER*LSVFEG
Trigger: TCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGGGCTGCATGCCACTTaGGGGTCAGGAGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAGLHAT*GSGVLT
Trigger: TGTTAAGACTCCTGACCCCCAAGTGGCATGCAGCCC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLRSRWA*GLHATW
Trigger: CCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCT...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGGGTGTTATATGGGTTaGAGGGGTCTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHGCYMG*RGLVEL
Trigger: CAACTCCACCAGACCCCTCCAACCCATATAACACCC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGGGAAGCGAACAGGGGTaGGGTGTTATATGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGGSEQG*GVIWVG
Trigger: TCCAACCCATATAACACCCCACCCCTGTTCGCTTCC...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGCCACGCGTTCCACTCTaGGTCAAATGCTTCCACGAT +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGPRVPL*VKCFHD
Trigger: ATCGTGGAAGCATTTGACCCAGAGTGGAACGCGTGG...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGGTCCCAGACTCACTGGGAGTGACCCAGGGTGGGAGGTGCCCAGCACTCAGCAACAATAAAAGGGCCTaGGTTTCCTGGAGACAGATT +
Preference number: 4 (lower is better)
Translates to: LVPDSLGVTQGGRCPALSNNKRA*VSWRQI
Trigger: AATCTGTCTCCAGGAAACCCAGGCCCTTTTATTGTT...GCTGAGTGCTGGGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTGGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GGTCAAAGGCTCTGTCCCCAGCCAGACAGCCTTACTCTTGGGATGACTCTACCTCTGAGCATGACAGAATaGCCTCAGCTTGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQRLCPQPDSLTLGMTLPLSMTE*PQLGPA
Trigger: GGCAGGGCCAAGCTGAGGCCATTCTGTCATGCTCAG...AGGTAGAGTCATCCCAAGAGTAAGGCTGTCTGGCTGGGGACAGAGCCTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTAGCCGTCACTTCTCTTaGTGCAGGCGAAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVSRHFS*CRRRTW
Trigger: CCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTACCTGCTTGGCATCTGTaGCGGTGCCAAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLPAWHL*RCQGRD
Trigger: GTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGG...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTCATCAAGATCTGTGCTaGCCAGGTCCCGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCHQDLC*PGPGGH
Trigger: ATGCCCACCGGGACCTGGTCAGCACAGATCTTGATG...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAGGTCACTGTACAGCATaGAAACGCCCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVGHCTA*KRPWGR
Trigger: CCTGCCCCACGGGCGTTTTCATGCTGTACAGTGACC...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACGGTGAGGAGAGTTCCTaGAACACGCTCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDGEESS*NTLLGL
Trigger: TAGCCCCAGGAGCGTGTTTCAGGAACTCTCCTCACC...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGCACAAGACACAGAGGTaGGGAGAGTTCCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGHKTQR*GEFLKH
Trigger: GTGTTTCAGGAACTCTCCTCACCTCTGTGTCTTGTG...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACGAGACCCCACACACTaGCGAGGAGGGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSRDPTH*RGGGRV
Trigger: TACACGGCCCCCTCCTCGGCAGTGTGTGGGGTCTCG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCGGGGCGTTGGAGGCCTaGTTATGGGTCCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFGALEA*LWVLDV
Trigger: GACATCGAGGACCCATAAGCAGGCCTCCAACGCCCC...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCCAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTGCCAGGGGCAGGGAGTaGAGAGGCGTGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSARGRE*RGVEAA
Trigger: TGCAGCTTCCACGCCTCTGCACTCCCTGCCCCTGGC...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTCTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCLTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCTTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFLAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATAGGAGTCTTAACAGGTaGTTTGGGGTTGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHRSLNR*FGVAAE
Trigger: TTCAGCGGCAACCCCAAAGCACCTGTTAAGACTCCT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCCAGACAGCAGCAAGGTaGGAGACGGGCAAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFQTAAR*ETGKGH
Trigger: ATGCCCCTTGCCCGTCTCGCACCTTGCTGCTGTCTG...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586057.5
CDS-3UTR CCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEAKNLA*CPLMFF
Trigger: GAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGC...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGAGGAGCAGGTGTTCAGGTATTCTCAACACACAGACCCCACATAGACACCAACTGGCCACAGGGGCGTTaGAGGCCTGCTTATGGGTCC +
Preference number: 4 (lower is better)
Translates to: RGAGVQVFSTHRPHIDTNWPQGR*RPAYGS
Trigger: GGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCA...GTTGGTGTCTATGTGGGGTCTGTGTGTTGAGAATACCTGAACACCTGCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAGCAGGGGCCGATTCCTaGATACCCTCCCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLAGADS*IPSQSA
Trigger: GGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGC...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGGAAGCGAACAGGGGTaGGGTGTTATATGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAGSEQG*GVIWVG
Trigger: TCCAACCCATATAACACCCCACCCCTGTTCGCTTCC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGTTGTTTATCCCAAGTTaGTTGAGCACGGAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWLFIPS*LSTERV
Trigger: CACCCTTTCCGTGCTCAACCAACTTGGGATAAACAA...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGCCTGCGGGAGGTGCTaGGGGGTTACAGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHACGRC*GVTDSS
Trigger: GCTGCTGTCTGTAACCCCCCAGCACCTCCCGCAGGC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586057.5
CDS-3UTR CCA 90 bp GCCCAGTGTTGCTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTGGAAATGTCGGGAATGTTaGAAACAGCGTAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AQCCSQAEPRGHRQLAIWKCREC*KQRKAC
Trigger: GCAGGCCTTACGCTGTTTCCAACATTCCCGACATTT...CCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTCGCTTAACATACGTGTaGCTGGAGACTATGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTRLTYV*LETMSS
Trigger: TGAACTCATAGTCTCCAGCCACACGTATGTTAAGCG...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAGGTCACTGTACAGCATaGAAACGCCCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLGHCTA*KRPWGR
Trigger: CCTGCCCCACGGGCGTTTTCATGCTGTACAGTGACC...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTATTGTGAAGGTATTTaGGCGGCTTCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGYCEGI*AASSVS
Trigger: GCTGACAGAGGAAGCCGCTCAAATACCTTCACAATA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACGAGACCCCACACACTaGCGAGGAGGGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSRDPTH*RGGGRV
Trigger: TACACGGCCCCCTCCTCGGCAGTGTGTGGGGTCTCG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCCGAGACCCCACACACTaGCGAGGAGGGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFRDPTH*RGGGRV
Trigger: TACACGGCCCCCTCCTCGGCAGTGTGTGGGGTCTCG...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTCACAGAGGGTGATGTaGATCTTGCCGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRSQRVM*ILPSPS
Trigger: CGAGGGGGACGGCAAGATGCACATCACCCTCTGTGA...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCTCTTCTTCTGGGTGGTaGTCAGGGTGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFSSSGW*SGCPRA
Trigger: TGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGA...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGAGGAGCAGGTGTTCAGGTATTCTCAACACACAGACCCCACATAGACACCAACGGGGCGTTGGAGGCCTaGTTATGGGTCCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: RGAGVQVFSTHRPHIDTNGALEA*LWVLDV
Trigger: GACATCGAGGACCCATAAGCAGGCCTCCAACGCCCC...GTTGGTGTCTATGTGGGGTCTGTGTGTTGAGAATACCTGAACACCTGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCTTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTLAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGAGACATGCGCAGTCTaGTTGTCAACTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAAETCAV*LSTFNN
Trigger: GTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCTC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGCAGTTGGCCACAGGGGCGTTGGAGGCCTGCTTATGGGTCCTCGATGTCGAGATTTGGCCCTGATCACTaGAAAACACAAGACACAGAG +
Preference number: 4 (lower is better)
Translates to: CSWPQGRWRPAYGSSMSRFGPDH*KTQDTE
Trigger: CTCTGTGTCTTGTGTTTTGCAGTGATCAGGGCCAAA...TCTCGACATCGAGGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp CCCGGCCTCCAGACATCCCCTGTCAGAGATGTGCCTCAGGGCTCTCCAGGGACCACAGGCGTTTGCACTTaGACATTTGTAGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: PGLQTSPVRDVPQGSPGTTGVCT*TFVENS
Trigger: AGAATTTTCTACAAATGTGCAAGTGCAAACGCCTGT...GGTCCCTGGAGAGCCCTGAGGCACATCTCTGACAGGGGATGTCTGGAGGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp TCCCCAGGGAAGGCCAATCCCCACAGCCTCACCAGAGTCTCCTGGTCCCAGACTTTGCTTTTGATTTCATaGTGGGCACAGAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SPGKANPHSLTRVSWSQTLLLIS*WAQRSF
Trigger: GAAACTCCTCTGTGCCCAGCATGAAATCAAAAGCAA...AGTCTGGGACCAGGAGACTCTGGTGAGGCTGTGGGGATTGGCCTTCCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCCGAGAAACTCCTGCTTaGGGGGCGCCGCGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIRETPA*GAPRRG
Trigger: ACCGCGGCGCGGCGCCCCCCAAGCAGGAGTTTCTCG...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTTTGGAGGCCTGCTTATaGGTCCTCGATGTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVLEACL*VLDVEK
Trigger: TTTCTCGACATCGAGGACCCATAAGCAGGCCTCCAA...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTTGGCCACAGGGGCGTTaGAGGCCTGCTTATGGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSWPQGR*RPAYGS
Trigger: GGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCA...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAATTCCTCCTGCAAGCTaGGGAGCATGTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSIPPAS*GACGRG
Trigger: CCCCCGCCCACATGCTCCCCAGCTTGCAGGAGGAAT...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCCTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGCAGGGGCCGATTCCTaGATACCCTCCCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHAGADS*IPSQSA
Trigger: GGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGTTAAACGATGCCAAATaGAGAGCCTTCTTAAACTAT +
Preference number: 4 (lower is better)
Translates to: VRCWELMVGTGAMGALARLNDAK*RAFLNY
Trigger: ATAGTTTAAGAAGGCTCTCCATTTGGCATCGTTTAA...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTCCCAGCCCCCGGCATaGCGTCTCCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSSQPPA*RLLLQA
Trigger: AGCCTGGAGGAGGAGACGCCATGCCGGGGGCTGGGA...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585421.5
CDS-3UTR CCA 90 bp AGAGGAGCAGGTGTTCAGGTATTCTCAACACACAGACCCCACATAGACACCAACTGTCATGTGCAGGGATaGCAGCCTCTCCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: RGAGVQVFSTHRPHIDTNCHVQG*QPLPRP
Trigger: GGGTCTCGGGAGAGGCTGCCATCCCTGCACATGACA...GTTGGTGTCTATGTGGGGTCTGTGTGTTGAGAATACCTGAACACCTGCTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTCTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCLWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCATCAAGATCTGTGCTaGCCAGGTCCCGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAHQDLC*PGPGGH
Trigger: ATGCCCACCGGGACCTGGTCAGCACAGATCTTGATG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCTCTTCTTCTGGGTGGTaGTCAGGGTGTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAASSSGW*SGCPRA
Trigger: TGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGA...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEKNLAW*PLMFFS
Trigger: AGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFKNLAW*PLMFFS
Trigger: AGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCTCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTG +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFSLSAA*LASVTV
Trigger: CACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGA...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCACATTTCCAGGCCCTaGCCTAACCCAGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAHISRP*PNPAGR
Trigger: TCTCCCAGCTGGGTTAGGGCAGGGCCTGGAAATGTG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAALTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGC +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFLDFLL*LAGVTC
Trigger: GCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAG...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCCACTCTGGGTCAAATaGTTCCACGATGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTPLWVK*FHDAET
Trigger: GGTTTCTGCATCGTGGAAGCATTTGACCCAGAGTGG...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGAAAGCATCAGAGACATaGGCAGTCTGCTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGKASET*AVCLST
Trigger: AGTTGACAAGCAGACTGCGCATGTCTCTGATGCTTT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGGCTCTTCTTCTGGGTaGTGCTCAGGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSGSSSG*CSGCPR
Trigger: CCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTTCAGGCTCTTCTTCTaGGTGGTGCTCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRFRLFF*VVLRVS
Trigger: GGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAA...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTATTCAGGCTCTTCTTCTaGGTGGTGCTCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVFRLFF*VVLRVS
Trigger: GGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAA...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TTCATGCTGGGCACAGAGGAGTTTCGCTTAACATACGTGTGGCTGGAGACTATGCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FMLGTEEFRLTYVWLETMHSQPI*YLWFRL
Trigger: GAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTG...CATAGTCTCCAGCCACACGTATGTTAAGCGAAACTCCTCTGTGCCCAGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp AAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KNLAWCPLMFFSVTQSIQAKNLA*CPLMFF
Trigger: GAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGC...CTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCTTGGAGGCCTGCTTATaGGTCCTCGATGTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTLEACL*VLDVEK
Trigger: TTTCTCGACATCGAGGACCCATAAGCAGGCCTCCAA...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTACAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTACCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVPRAER*LSVFEG
Trigger: TCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGGGCTGCATGCCACTTaGGGGTCAGGAGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRGLHAT*GSGVLT
Trigger: TGTTAAGACTCCTGACCCCCAAGTGGCATGCAGCCC...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGGGTGGGGTGTTATATaGGTTGGAGGGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAGWGVI*VGGVWW
Trigger: CCACCAGACCCCTCCAACCCATATAACACCCCACCC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTGGAAGCGAACAGGGGTaGGGTGTTATATGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCGSEQG*GVIWVG
Trigger: TCCAACCCATATAACACCCCACCCCTGTTCGCTTCC...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCCGCTGTCGTCCCTGTaGGATTTGTTCCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHPLSSL*DLFRDP
Trigger: AGGGTCCCGGAACAAATCCCACAGGGACGACAGCGG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CCA 90 bp GCCCAGTGTTGCTCGCAAGCCGAGCCCCGAGGTCATCGGCAACTAGCAATTTGGTACAGCTCCTTTTTCTaGAAGCTACAGGTAACAGAG +
Preference number: 4 (lower is better)
Translates to: AQCCSQAEPRGHRQLAIWYSSFF*KLQVTE
Trigger: CTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTA...CCAAATTGCTAGTTGCCGATGACCTCGGGGCTCGGCTTGCGAGCAACACTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp TGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGGCACTCGTCCGGGCTTTTGATTTCATGCTaGGCACAGAGGAGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: CPLMFFSVTQSIQRHSSGLLISC*AQRSFA
Trigger: AGCGAAACTCCTCTGTGCCCAGCATGAAATCAAAAG...CCCGGACGAGTGCCTCTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp GGTCAAAGGCTCTGTCCCCAGCCAGACAGCCTTACTCTTGGGATGACTCTACCTCGGCCTTTCCTGCAATaGGATATTCCTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQRLCPQPDSLTLGMTLPRPFLQ*DIPSFL
Trigger: GAGGAAAGAAGGAATATCTCATTGCAGGAAAGGCCG...AGGTAGAGTCATCCCAAGAGTAAGGCTGTCTGGCTGGGGACAGAGCCTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCRLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTGGAGTTGTATATACTaGAATCACATGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGWSCIY*NHMDWS
Trigger: GGACCAGTCCATGTGATTTCAGTATATACAACTCCA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTAAGACGGGAGACGAATaGAAGCAAAGATGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAKTGDE*KQRCSK
Trigger: CTTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTT...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATGCGATTGCTCAAGAATaGTACAAAGCATCAGAGACA +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHAIAQE*YKASET
Trigger: TGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGC...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGGCAAGGGGCATGGTaGTCCCAGCCCCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGQGAW*SQPPAW
Trigger: CCATGCCGGGGGCTGGGATCACCATGCCCCTTGCCC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACGGTGAGGAGAGTTCCTaGAACACGCTCCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHGEESS*NTLLGL
Trigger: TAGCCCCAGGAGCGTGTTTCAGGAACTCTCCTCACC...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATCACAGAGGGTGATGTaGATCTTGCCGTCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSSQRVM*ILPSPS
Trigger: CGAGGGGGACGGCAAGATGCACATCACCCTCTGTGA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCTCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAASLSAA*LASVTV
Trigger: CACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGA...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTCCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEDKAKL*NSIQVP
Trigger: AGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATC...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTGAAGGAATCCACCTaGATAGGCCACGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALKEST*IGHAFH
Trigger: GTGGAACGCGTGGCCTATGCAGGTGGATTCCTTCAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGCTTCCTCTGTCAGCTaGCACCCGGCTCTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAASSVS*HPALLN
Trigger: GTTAAGAAGAGCCGGGTGGCAGCTGACAGAGGAAGC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAGCTTCCTCTGTCAGCTaGCACCCGGCTCTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLASSVS*HPALLN
Trigger: GTTAAGAAGAGCCGGGTGGCAGCTGACAGAGGAAGC...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTAAAGCATCAGAGACATaGGCAGTCTGCTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAKASET*AVCLST
Trigger: AGTTGACAAGCAGACTGCGCATGTCTCTGATGCTTT...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACAGGGATCAAAATCCCTaGCGTCCATCTGGAGACACT +
Preference number: 4 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDRDQNP*RPSGDT
Trigger: AGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCT...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTACAGACACATAGTGCCTaGCAGAGGGAGGATGGGATG +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLQTHSA*QREDGM
Trigger: CATCCCATCCTCCCTCTGCCAGGCACTATGTGTCTG...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCACAGGCAAGAAGCAATaGCAACCGCAGCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAATGKKQ*QPQQLG
Trigger: CCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCTGT...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGACAGGCAAGAAGCAATaGCAACCGCAGCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHATGKKQ*QPQQLG
Trigger: CCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCTGT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCTCTTTACAACACAGGTaGGAGGAAACAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: RQEAMATAAAREGTLRAASLQHR*EETRDS
Trigger: AGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGA...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCAGGTCCCGGTGGGCATaGGGGCTGCATGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIRSRWA*GLHATW
Trigger: CCAAGTGGCATGCAGCCCCCATGCCCACCGGGACCT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTCAAAGGCTCTGTCCCCAGCCAGACAGCCTTACTCTTGGGATGACTCTACCTGGGATTAACGGGTCCTaGAAAGCCAGGGATCAAAAT +
Preference number: 4 (lower is better)
Translates to: GQRLCPQPDSLTLGMTLPGINGS*KARDQN
Trigger: ATTTTGATCCCTGGCTTTCCAGGACCCGTTAATCCC...AGGTAGAGTCATCCCAAGAGTAAGGCTGTCTGGCTGGGGACAGAGCCTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAAGCCGTCACTTCTCTTaGTGCAGGCGAAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLSRHFS*CRRRTW
Trigger: CCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCT...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCAGCCGTCACTTCTCTTaGTGCAGGCGAAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAASRHFS*CRRRTW
Trigger: CCAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCT...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGAACACAGCACAGGAATaGTTACAGCTGATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGNTAQE*LQLMSK
Trigger: TTTTGACATCAGCTGTAATCATTCCTGTGCTGTGTT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGCGATTGCTCAAGAATaGTACAAAGCATCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAAIAQE*YKASET
Trigger: TGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAAACGCCTGTTGCGGGTaGACCGGGGAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKNACCG*TGEQLQ
Trigger: CTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTTCCCTAAGTGCTGCCTaGTTGGCATCTGTGACGGTG +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSSLSAA*LASVTV
Trigger: CACCGTCACAGATGCCAAGCAGGCAGCACTTAGGGA...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCTGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTGCTTTGGAAGCATTTTaGAAGACCACGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSALEAF*KTTPRP
Trigger: CGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGC...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGGCATGGGGGCTGCATaGCACTTGGGGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIGMGAA*HLGVRS
Trigger: ACTCCTGACCCCCAAGTGGCATGCAGCCCCCATGCC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCCCACTCTGGGTCAAATaGTTCCACGATGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRPLWVK*FHDAET
Trigger: GGTTTCTGCATCGTGGAAGCATTTGACCCAGAGTGG...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCAGCAGAGGCAGGACCTaGTTACCTTGCACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFSRGRT*LPCTRS
Trigger: GCTGCGAGTGCAAGGTAAGCAGGTCCTGCCTCTGCT...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTATCAAGAACTAGCCACTaGTTCCAGGCTGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLSRTSH*FQAALG
Trigger: TCCAAGGGCAGCCTGGAACCAGTGGCTAGTTCTTGA...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACACAGGCAAGAAGCAATaGCAACCGCAGCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHTGKKQ*QPQQLG
Trigger: CCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCTGT...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCCCCGTGCAGAACGATaGCTGTCAGTCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHPRAER*LSVFEG
Trigger: TCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTGGGCTGCATGCCACTTaGGGGTCAGGAGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSGLHAT*GSGVLT
Trigger: TGTTAAGACTCCTGACCCCCAAGTGGCATGCAGCCC...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCTGACCAGGTCCCGGTaGGCATGGGGGCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLLTRSR*AWGLHA
Trigger: GGCATGCAGCCCCCATGCCCACCGGGACCTGGTCAG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGGAAGCGAACAGGGGTaGGGTGTTATATGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAGSEQG*GVIWVG
Trigger: TCCAACCCATATAACACCCCACCCCTGTTCGCTTCC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATAAAGACCAACGTGTGTaGATCAAATATAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHKDQRV*IKYKGH
Trigger: GTGGCCTTTATATTTGATCCACACACGTTGGTCTTT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCCGGCCTTTCCTGCAATaGGATATTCCTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFRPFLQ*DIPSFL
Trigger: GAGGAAAGAAGGAATATCTCATTGCAGGAAAGGCCG...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTACGGCCTTTCCTGCAATaGGATATTCCTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVRPFLQ*DIPSFL
Trigger: GAGGAAAGAAGGAATATCTCATTGCAGGAAAGGCCG...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACCAAAAAGACTCAGCTaGGGCTGGAACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSPKRLS*GWNAAQ
Trigger: CTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTGG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGGGTTCACCTATCATCTaGGAATTCACCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGGSPII*EFTFRK
Trigger: TTTTCTAAAGGTGAATTCTCAGATGATAGGTGAACC...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHLWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTAACACAGCACAGGAATaGTTACAGCTGATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKANTAQE*LQLMSK
Trigger: TTTTGACATCAGCTGTAATCATTCCTGTGCTGTGTT...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCTATTGTGAAGGTATTTaGGCGGCTTCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFYCEGI*AASSVS
Trigger: GCTGACAGAGGAAGCCGCTCAAATACCTTCACAATA...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCTGCCACTATTTATTGTaGAGGTATTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTCHYLL*RYLSGF
Trigger: GAAGCCGCTCAAATACCTTCACAATAAATAGTGGCA...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCGCCTTACTCTTGGGATaGCTCTACCTTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFALLLG*LYLPRA
Trigger: GGCTCTGGGAAGGTAGAGTCATCCCAAGAGTAAGGC...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCTGGGGTGCAGTGGTGTaGTCTCAACTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFWGAVV*SQLTAT
Trigger: GGTTGCAGTGAGTTGAGATCACACCACTGCACCCCA...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCGAGACCCCACACACTaGCGAGGAGGGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLRDPTH*RGGGRV
Trigger: TACACGGCCCCCTCCTCGGCAGTGTGTGGGGTCTCG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRKNLAW*PLMFFS
Trigger: AGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGAGGCGTGGAAGCTaGAGAAAACAAGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSQRRGS*RKQGPC
Trigger: ACATGGCCCTTGTTTTCTGCAGCTTCCACGCCTCTG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTGCAACTCAATCCAGGTaGCTGATGCCAGAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSATQSR*LMPEQA
Trigger: TGCCTGTTCTGGCATCAGGCACCTGGATTGAGTTGC...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTTTAGCTGGCGTCACATaGAGAAAGCCCCGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSLAGVT*RKPRAE
Trigger: TTCTGCACGGGGCTTTCTGCATGTGACGCCAGCTAA...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTAGAAGTTGGTATATCTaGAACTCAGGTTCACCTATC +
Preference number: 4 (lower is better)
Translates to: RWLWKHFARPRPGRQASVRSWYI*NSGSPI
Trigger: GATAGGTGAACCTGAGTTGCAGATATACCAACTTCT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAGCTTTGGAAGCATTTTaGAAGACCACGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSALEAF*KTTPRP
Trigger: CGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGC...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGGTGGGCATGGGGGCTaGATGCCACTTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLGGHGG*MPLGGQ
Trigger: CTGACCCCCAAGTGGCATGCAGCCCCCATGCCCACC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGTGGGCATGGGGGCTaGATGCCACTTGGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGGHGG*MPLGGQ
Trigger: CTGACCCCCAAGTGGCATGCAGCCCCCATGCCCACC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTACCACTCTGGGTCAAATaGTTCCACGATGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLPLWVK*FHDAET
Trigger: GGTTTCTGCATCGTGGAAGCATTTGACCCAGAGTGG...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCAGGACCTGCTTACCTTaGACTCGCAGCCCATCTGGT +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFRTCLP*TRSPSG
Trigger: ACCAGATGGGCTGCGAGTGCAAGGTAAGCAGGTCCT...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCCTCATCCTCCCAAGTTaGTGGGATCACAGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFLILPS*WDHRRA
Trigger: TGCACGCCTGTGATCCCAGCAACTTGGGAGGATGAG...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp AAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGAGCCACACAGGCGTTTaGACTTGCACATTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KNLAWCPLMFFSVTQSIQSHTGV*TCTFVE
Trigger: TTCTACAAATGTGCAAGTGCAAACGCCTGTGTGGCT...CTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp CTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCATGCTCTTACTCTCAGCCACATCTAGGCGCTaGACTGCTCCAGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLFLEATGNRAEFMLLLSATSRR*TAPAVP
Trigger: AGGCACAGCTGGAGCAGTGCAGCGCCTAGATGTGGC...TGAGAGTAAGAGCATGAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCATTCAGGCTCTTCTTCTaGGTGGTGCTCAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSFRLFF*VVLRVS
Trigger: GGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAA...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSHSQPI*YLWFRL
Trigger: GAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTG...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAATGGCCACAGGGGCGTTaGAGGCCTGCTTATGGGTCC +
Preference number: 4 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKWPQGR*RPAYGS
Trigger: GGACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCA...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGGCTGCCCTTGGATGTaGGGGGAGTCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLGCPWM*GESGAG
Trigger: CCCAGCACCTGACTCCCCCCACATCCAAGGGCAGCC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACTCAAGAACTAGCCACTaGTTCCAGGCTGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHSRTSH*FQAALG
Trigger: TCCAAGGGCAGCCTGGAACCAGTGGCTAGTTCTTGA...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATCAAGAACTAGCCACTaGTTCCAGGCTGCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSSRTSH*FQAALG
Trigger: TCCAAGGGCAGCCTGGAACCAGTGGCTAGTTCTTGA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAATTCCTCCTGCAAGCTaGGGAGCATGTGGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKIPPAS*GACGRG
Trigger: CCCCCGCCCACATGCTCCCCAGCTTGCAGGAGGAAT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTACTTACTATGCTTAGCTaGCGTCACATGCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVLTMLS*RHMQKA
Trigger: GGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAG...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGAATACAAGCAGAAGTTaGTATATCTGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGNTSRS*YICNSG
Trigger: ACCTGAGTTGCAGATATACCAACTTCTGCTTGTATT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTGGGTGTTATATGGGTTaGAGGGGTCTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSGCYMG*RGLVEL
Trigger: CAACTCCACCAGACCCCTCCAACCCATATAACACCC...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCCACGCGTTCCACTCTaGGTCAAATGCTTCCACGAT +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHPRVPL*VKCFHD
Trigger: ATCGTGGAAGCATTTGACCCAGAGTGGAACGCGTGG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTTGCAATAATTTGAACTaGAGAACCAAAGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKACNNLN*RTKDGR
Trigger: TCTCCCGTCTTTGGTTCTCCAGTTCAAATTATTGCA...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCTACCCTGGGATGTCCTaGGTTGTTTATCCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFYPGMS*VVYPKL
Trigger: CAACTTGGGATAAACAACCCAGGACATCCCAGGGTA...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536189.6
3UTR CAA 72 bp GACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTaGTGTGTTCCCAGCACCGGAAGGTCTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: DMRSLLVNFQQL*CVPSTGRSQTS
Trigger: TGAAGTCTGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCGGCCTTTCCTGCAATaGGATATTCCTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAARPFLQ*DIPSFL
Trigger: GAGGAAAGAAGGAATATCTCATTGCAGGAAAGGCCG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGGCCTTTCCTGCAATaGGATATTCCTTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHARPFLQ*DIPSFL
Trigger: GAGGAAAGAAGGAATATCTCATTGCAGGAAAGGCCG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCCTGCTTGGCATCTGTaGCGGTGCCAAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHPAWHL*RCQGRD
Trigger: GTCCCTGCCTTGGCACCGTCACAGATGCCAAGCAGG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTGGTTCACCTATCATCTaGGAATTCACCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LRLERSSAGVSRSHFYKAGSPII*EFTFRK
Trigger: TTTTCTAAAGGTGAATTCTCAGATGATAGGTGAACC...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSLWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAGGTCACTGTACAGCATaGAAACGCCCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKGHCTA*KRPWGR
Trigger: CCTGCCCCACGGGCGTTTTCATGCTGTACAGTGACC...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCAAGACGGGAGACGAATaGAAGCAAAGATGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRKTGDE*KQRCSK
Trigger: CTTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTT...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCTATTGTGAAGGTATTTaGGCGGCTTCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAYCEGI*AASSVS
Trigger: GCTGACAGAGGAAGCCGCTCAAATACCTTCACAATA...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCACAAGACACAGAGGTaGGGAGAGTTCCTGAAACAC +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHHKTQR*GEFLKH
Trigger: GTGTTTCAGGAACTCTCCTCACCTCTGTGTCTTGTG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586057.5
CDS-3UTR TCA 90 bp AAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGGGAAAAACTTGCTTTTaGTTTCATGCTGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: KNLAWCPLMFFSVTQSIQGKTCF*FHAGHR
Trigger: TCTGTGCCCAGCATGAAATCAAAAGCAAGTTTTTCC...CTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCCGAGACCCCACACACTaGCGAGGAGGGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIRDPTH*RGGGRV
Trigger: TACACGGCCCCCTCCTCGGCAGTGTGTGGGGTCTCG...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCATGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTACCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTAGCCCAGCCGGGCCCTaGACACAAGCCCGGATAAAG +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLSPAGP*TQARIK
Trigger: CTTTATCCGGGCTTGTGTGCAGGGCCCGGCTGGGCT...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGC +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAALDFLL*LAGVTC
Trigger: GCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGC +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALDFLL*LAGVTC
Trigger: GCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGCTTTGGAAGCATTTTaGAAGACCACGCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSALEAF*KTTPRP
Trigger: CGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGCATGGGGGCTGCATaGCACTTGGGGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGMGAA*HLGVRS
Trigger: ACTCCTGACCCCCAAGTGGCATGCAGCCCCCATGCC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCGAGACATGCGCAGTCTaGTTGTCAACTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRETCAV*LSTFNN
Trigger: GTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCTC...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAAAAGCATCAGAGACATaGGCAGTCTGCTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVKASET*AVCLST
Trigger: AGTTGACAAGCAGACTGCGCATGTCTCTGATGCTTT...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCACGGACCGAGCGATTaGTCAAGAATGATACAAAGC +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAHGPSD*SRMIQS
Trigger: GCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCCTCCTACTGCAGGTGTaGTTCCCTTTGGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFLLLQV*FPLGHL
Trigger: AAGATGGCCCAAAGGGAAGCACACCTGCAGTAGGAG...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAGCGAAGAACTTGGCCTaGTGCCCGTTGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSAKNLA*CPLMFF
Trigger: GAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGC...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTTACTATGCTTAGCTaGCGTCACATGCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALTMLS*RHMQKA
Trigger: GGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGGGTGGGGTGTTATATaGGTTGGAGGGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIGWGVI*VGGVWW
Trigger: CCACCAGACCCCTCCAACCCATATAACACCCCACCC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTCCGGGACCCTACCCTaGGATGTCCTGGGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSSGTLP*DVLGCL
Trigger: TAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGA...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR TCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCCCAAAAAGACTCAGCTaGGGCTGGAACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIPKRLS*GWNAAQ
Trigger: CTGAGCTGCGTTCCAGCCTCAGCTGAGTCTTTTTGG...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCGGTTCACCTATCATCTaGGAATTCACCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTGSPII*EFTFRK
Trigger: TTTTCTAAAGGTGAATTCTCAGATGATAGGTGAACC...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAAGACGGGAGACGAATaGAAGCAAAGATGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAKTGDE*KQRCSK
Trigger: CTTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATATTGTGAAGGTATTTaGGCGGCTTCCTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSYCEGI*AASSVS
Trigger: GCTGACAGAGGAAGCCGCTCAAATACCTTCACAATA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTATGCCACTATTTATTGTaGAGGTATTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVCHYLL*RYLSGF
Trigger: GAAGCCGCTCAAATACCTTCACAATAAATAGTGGCA...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSKNLAW*PLMFFS
Trigger: AGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGGGGCGTTGGAGGCCTaGTTATGGGTCCTCGATGTC +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLGALEA*LWVLDV
Trigger: GACATCGAGGACCCATAAGCAGGCCTCCAACGCCCC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCCCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: INRIDGAPSRTSHWFQAAPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAAAGCATCAGAGACATaGGCAGTCTGCTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAKASET*AVCLST
Trigger: AGTTGACAAGCAGACTGCGCATGTCTCTGATGCTTT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGGAACGCAGCTCAGCTaGGGTTTCTCGCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIGTQLS*GFSLPF
Trigger: AAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCTTACTATGCTTAGCTaGCGTCACATGCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSLTMLS*RHMQKA
Trigger: GGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTTCTTTACAACACAGGTaGGAGGAAACAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCSLQHR*EETRDS
Trigger: AGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGA...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTAAAGACCAACGTGTGTaGATCAAATATAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCKDQRV*IKYKGH
Trigger: GTGGCCTTTATATTTGATCCACACACGTTGGTCTTT...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCCTTTGGGGTTGCCGCTaGATAGAACAGGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPILWGCR*IEQAKV
Trigger: CACCTTAGCCTGTTCTATTCAGCGGCAACCCCAAAG...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCATCAAGATCTGTGCTaGCCAGGTCCCGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHHQDLC*PGPGGH
Trigger: ATGCCCACCGGGACCTGGTCAGCACAGATCTTGATG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCTTGAACATCTTTATCTaGTTGATCTCATACTGGATC +
Preference number: 4 (lower is better)
Translates to: PSQDERDLVGLLHSLATTLNIFI*LISYWI
Trigger: GATCCAGTATGAGATCAAGCAGATAAAGATGTTCAA...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCAAGAACTTGGCCTGGTaGCCGTTGATGTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFKNLAW*PLMFFS
Trigger: AGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCACCTGCTACACAGTCTTaGAACGACCCTCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSPATQS*NDPQKF
Trigger: AAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGG...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCTCACCGATTCCTCCTaGAAGCTGGGGAGCATGTGG +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHLTDSS*KLGSMW
Trigger: CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAAGAAGTTGGTATATCTaGAACTCAGGTTCACCTATC +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVRSWYI*NSGSPI
Trigger: GATAGGTGAACCTGAGTTGCAGATATACCAACTTCT...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCAGAAGTTGGTATATCTaGAACTCAGGTTCACCTATC +
Preference number: 4 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFRSWYI*NSGSPI
Trigger: GATAGGTGAACCTGAGTTGCAGATATACCAACTTCT...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTGAGACATGCGCAGTCTaGTTGTCAACTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSETCAV*LSTFNN
Trigger: GTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCTC...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATTTGGCCCTGATCACTaGAAAACACAAGACACAGAG +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSFGPDH*KTQDTE
Trigger: CTCTGTGTCTTGTGTTTTGCAGTGATCAGGGCCAAA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCGGCTCTTCTTCTGGGTaGTGCTCAGGGTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIGSSSG*CSGCPR
Trigger: CCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCC...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTAATACAAGCAGAAGTTaGTATATCTGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCNTSRS*YICNSG
Trigger: ACCTGAGTTGCAGATATACCAACTTCTGCTTGTATT...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCTGCAATAATTTGAACTaGAGAACCAAAGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRCNNLN*RTKDGR
Trigger: TCTCCCGTCTTTGGTTCTCCAGTTCAAATTATTGCA...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TTCATGCTGGGCACAGAGGAGTTTCGCTTAACATACGTGTGGCTGGAGACTATGGTAGAAAATTCTCCATaGGACCATATTCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FMLGTEEFRLTYVWLETMVENSP*DHILSP
Trigger: GGGAGAGAGAATATGGTCCCATGGAGAATTTTCTAC...CATAGTCTCCAGCCACACGTATGTTAAGCGAAACTCCTCTGTGCCCAGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR TCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIRLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAACACAGCACAGGAATaGTTACAGCTGATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHANTAQE*LQLMSK
Trigger: TTTTGACATCAGCTGTAATCATTCCTGTGCTGTGTT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTTTGAACATCTTTATCTaGTTGATCTCATACTGGATC +
Preference number: 4 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCLNIFI*LISYWI
Trigger: GATCCAGTATGAGATCAAGCAGATAAAGATGTTCAA...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCAGGAGTCTTAACAGGTaGTTTGGGGTTGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPIRSLNR*FGVAAE
Trigger: TTCAGCGGCAACCCCAAAGCACCTGTTAAGACTCCT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGCTTCCTCTGTCAGCTaGCACCCGGCTCTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLASSVS*HPALLN
Trigger: GTTAAGAAGAGCCGGGTGGCAGCTGACAGAGGAAGC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCTTGGAGGCCTGCTTATaGGTCCTCGATGTCGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPILEACL*VLDVEK
Trigger: TTTCTCGACATCGAGGACCCATAAGCAGGCCTCCAA...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGGAGTGCAGAGGCGTaGAAGCTGCAGAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGSAEA*KLQKTR
Trigger: CCTTGTTTTCTGCAGCTTCCACGCCTCTGCACTCCC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAAATACAAGCAGAAGTTaGTATATCTGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVNTSRS*YICNSG
Trigger: ACCTGAGTTGCAGATATACCAACTTCTGCTTGTATT...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCGGGTGGGGTGTTATATaGGTTGGAGGGGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIGWGVI*VGGVWW
Trigger: CCACCAGACCCCTCCAACCCATATAACACCCCACCC...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAAAGACCAACGTGTGTaGATCAAATATAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAKDQRV*IKYKGH
Trigger: GTGGCCTTTATATTTGATCCACACACGTTGGTCTTT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAAAAGACCAACGTGTGTaGATCAAATATAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLKDQRV*IKYKGH
Trigger: GTGGCCTTTATATTTGATCCACACACGTTGGTCTTT...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCATGCTCTTACTCTCAAGGTGTGCTTCCCTTTaGGCCATCTTCTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLFLEATGNRAEFMLLLSRCASL*AIFYLP
Trigger: AGGAAGGTAGAAGATGGCCCAAAGGGAAGCACACCT...TGAGAGTAAGAGCATGAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
3UTR CAA 72 bp GTGGGGTGTTATATGGGTTGGAGGGGTCTGGTGGAGTaGTATATACTGAAATCACATGGACTGGTCCATTAT +
Preference number: 4 (lower is better)
Translates to: VGCYMGWRGLVE*YILKSHGLVHY
Trigger: ATAATGGACCAGTCCATGTGATTTCAGTATATACAACTCCACCAGACCCCTCCAACCCATATAACACCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTATGTCCCTCTCAAGATaGAAGGGACCTGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLMSLSR*KGPGRP
Trigger: AGGCCTACCAGGTCCCTTTCATCTTGAGAGGGACAT...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCATGGAGTTGTATATACTaGAATCACATGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSWSCIY*NHMDWS
Trigger: GGACCAGTCCATGTGATTTCAGTATATACAACTCCA...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCATGCCACTATTTATTGTaGAGGTATTTGAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSCHYLL*RYLSGF
Trigger: GAAGCCGCTCAAATACCTTCACAATAAATAGTGGCA...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAGCGATTGCTCAAGAATaGTACAAAGCATCAGAGACA +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSAIAQE*YKASET
Trigger: TGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGC...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCCTGGACTTCTTACTATaGTTAGCTGGCGTCACATGC +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPILDFLL*LAGVTC
Trigger: GCATGTGACGCCAGCTAAGCATAGTAAGAAGTCCAG...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLPIWYL*FRLFFW
Trigger: CCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCACAGGCAAGAAGCAATaGCAACCGCAGCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPITGKKQ*QPQQLG
Trigger: CCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCTGT...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCATCTTTACAACACAGGTaGGAGGAAACAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSSLQHR*EETRDS
Trigger: AGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGA...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCCACGCGTTCCACTCTaGGTCAAATGCTTCCACGAT +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHPRVPL*VKCFHD
Trigger: ATCGTGGAAGCATTTGACCCAGAGTGGAACGCGTGG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHRLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTAGGCTGAGAAAGAAGTaGGTGTGTCACCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLRLRKK*VCHQSH
Trigger: GTGGCTTTGGTGACACACTCACTTCTTTCTCAGCCT...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGGTTCACCTATCATCTaGGAATTCACCTTTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSGSPII*EFTFRK
Trigger: TTTTCTAAAGGTGAATTCTCAGATGATAGGTGAACC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCTGGGAGATCCCTAAGTaGTGCCTGCTTGGCATCTGT +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIWEIPK*CLLGIC
Trigger: ACAGATGCCAAGCAGGCAGCACTTAGGGATCTCCCA...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTCCACTCTGGGTCAAATaGTTCCACGATGCAGAAACC +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLPLWVK*FHDAET
Trigger: GGTTTCTGCATCGTGGAAGCATTTGACCCAGAGTGG...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIPIWYL*FRLFFW
Trigger: CCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGG...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCAAGGGATGTCAGAGCTaGACCAGTCGAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIKGCQS*TSRNPW
Trigger: CCAAGGGTTTCGACTGGTCCAGCTCTGACATCCCTT...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHARIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCCCACGCGTTCCACTCTaGGTCAAATGCTTCCACGAT +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIPRVPL*VKCFHD
Trigger: ATCGTGGAAGCATTTGACCCAGAGTGGAACGCGTGG...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGTTAAACGATGCCAAATaGAGAGCCTTCTTAAACTAT +
Preference number: 4 (lower is better)
Translates to: CPRTERLLKNDTKHQRHALNDAK*RAFLNY
Trigger: ATAGTTTAAGAAGGCTCTCCATTTGGCATCGTTTAA...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAGGAGAATCGAACACTaGAGAATAGACAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHRRIEH*RIDRPL
Trigger: CAGCGGCCTGTCTATTCTCCAGTGTTCGATTCTCCT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR TCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCAACACAGCACAGGAATaGTTACAGCTGATGTCAAAA +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSNTAQE*LQLMSK
Trigger: TTTTGACATCAGCTGTAATCATTCCTGTGCTGTGTT...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCAGAAGTTGGTATATCTaGAACTCAGGTTCACCTATC +
Preference number: 4 (lower is better)
Translates to: HRWEETRDSPYHYRESSSRSWYI*NSGSPI
Trigger: GATAGGTGAACCTGAGTTGCAGATATACCAACTTCT...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATCACGGACCGAGCGATTaGTCAAGAATGATACAAAGC +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHHGPSD*SRMIQS
Trigger: GCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTG...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHRIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
3UTR CAA 72 bp TTTGATAATACTGTTTATTGTCCACGGACCGAGCGATaGCTCAAGAATGATACAAAGCATCAGAGACATGCG +
Preference number: 4 (lower is better)
Translates to: FDNTVYCPRTER*LKNDTKHQRHA
Trigger: CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACAATAAACAGTATTATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTAAAGTTTCTGCAAAATaGACATTTCCAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLKVSAK*TFPGPA
Trigger: GGCAGGGCCTGGAAATGTGCATTTTGCAGAAACTTT...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR GCA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTGATAAAGCAAAGCTGTaGAACTCAATCCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLDKAKL*NSIQVP
Trigger: AGGCACCTGGATTGAGTTGCACAGCTTTGCTTTATC...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCCTTACTATGCTTAGCTaGCGTCACATGCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPILTMLS*RHMQKA
Trigger: GGCTTTCTGCATGTGACGCCAGCTAAGCATAGTAAG...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCTGCAATAATTTGAACTaGAGAACCAAAGACGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPICNNLN*RTKDGR
Trigger: TCTCCCGTCTTTGGTTCTCCAGTTCAAATTATTGCA...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCATTAAACGATGCCAAATaGAGAGCCTTCTTAAACTAT +
Preference number: 4 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSLNDAK*RAFLNY
Trigger: ATAGTTTAAGAAGGCTCTCCATTTGGCATCGTTTAA...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR TCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCAAGACGGGAGACGAATaGAAGCAAAGATGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIKTGDE*KQRCSK
Trigger: CTTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTT...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCAATACAAGCAGAAGTTaGTATATCTGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGRKQEILLIITEKVLPINTSRS*YICNSG
Trigger: ACCTGAGTTGCAGATATACCAACTTCTGCTTGTATT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATTCTTTACAACACAGGTaGGAGGAAACAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: ILSCLQDENRRRELCLEHSLQHR*EETRDS
Trigger: AGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGA...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAAAGAATCATATTAATTTaGACCCATGGGATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKRIILI*THGMSV
Trigger: AACACTCATCCCATGGGTCCAAATTAATATGATTCT...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CCA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCTTAAACGATGCCAAATaGAGAGCCTTCTTAAACTAT +
Preference number: 4 (lower is better)
Translates to: HLRNTSRSWYICNSGSPILNDAK*RAFLNY
Trigger: ATAGTTTAAGAAGGCTCTCCATTTGGCATCGTTTAA...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS GCA 90 bp CATCTGCATTGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAGCTaGAGGCGTCGGCCGGGCGAAGCAGCGTCGCCAGCAGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: HLHCKTPVAGAPGSS*RRRPGEAASPAAGG
Trigger: GCCTCCTGCTGCTGGCGACGCTGCTTCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CAA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGCAGAATGGCCTCAGCTaGGCCCTGCCCTCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ALVRGGDVARDHGAARDLQNGLS*ALPSGG
Trigger: TCCCCCAGAGGGCAGGGCCAAGCTGAGGCCATTCTG...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS GCA 90 bp TTGGCCCTGATCACTACATCTGCATTGCAAAACGCCTGTTGCGGGTaGACCGGGGAGCAGCTGCAGGCGTCGGCCGGGCGAAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: LALITTSALQNACCG*TGEQLQASAGRSSV
Trigger: GACGCTGCTTCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGATGTAGTGATCAGGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CAA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGTTGGCCACAGGGGCGTaGGAGGCCTGCTTATGGGTC +
Preference number: 5 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWLATGA*EACLWV
Trigger: GACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAA...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS CCA 90 bp ATGGGGCAGCGCGTGATCTTGCACTCGCAGCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGGGTGGTGCTCAGGGTGTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: MGQRVILHSQPIWYL*FRLFFWVVLRVSQG
Trigger: GCCCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTGCAAGATCACGCGCTGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGAGGGTGATGTGCATCTaGCCGTCCCCCTCGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWRVMCI*PSPSAF
Trigger: AAAGGCCGAGGGGGACGGCAAGATGCACATCACCCT...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCTTGGCCACAGGGGCGTaGGAGGCCTGCTTATGGGTC +
Preference number: 5 (lower is better)
Translates to: RQEAMATAAAREGTLRAALATGA*EACLWV
Trigger: GACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAA...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTTGGCCACAGGGGCGTaGGAGGCCTGCTTATGGGTC +
Preference number: 5 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGLATGA*EACLWV
Trigger: GACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGGTCTTAACAGGTGCTTaGGGGTTGCCGCTGAATAGA +
Preference number: 5 (lower is better)
Translates to: VRCWELMVGTGAMGALARVLTGA*GLPLNR
Trigger: TCTATTCAGCGGCAACCCCAAAGCACCTGTTAAGAC...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS GCA 90 bp GATCAAAATCCCTGCCGTCCATCTGGAGACACTGGGAGGAGGCGATaGTCCAGCAGAGGCAGGACCTGCTTACCTTGCACTCGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: DQNPCRPSGDTGRRR*SSRGRTCLPCTRSP
Trigger: TGGGCTGCGAGTGCAAGGTAAGCAGGTCCTGCCTCTGCTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGATTTTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS GCA 90 bp GAGCCGGGGATTAACGGGTCCTGGAAAGCCAGGGATCAAAATCCCTaGCGTCCATCTGGAGACACTGGGAGGAGGCGATGCTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: EPGINGSWKARDQNP*RPSGDTGRRRCSSR
Trigger: TCTGCTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCTGGCTTTCCAGGACCCGTTAATCCCCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CCA 90 bp CTCCAGCAGAGGCAGGACCTGCTTACCTTGCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTCTTCTTCTGGGTGGTGCTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LQQRQDLLTLHSQPI*YLWFRLFFWVVLRV
Trigger: CACCCTGAGCACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTGCAAGGTAAGCAGGTCCTGCCTCTGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGTTGGCCTGGTGCCCGTaGATGTTCTTCTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWLAWCP*MFFSVT
Trigger: GGTCACAGAGAAGAACATCAACGGGCACCAGGCCAA...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGTTGGCCACAGGGGCGTaGGAGGCCTGCTTATGGGTC +
Preference number: 5 (lower is better)
Translates to: AGVTCRKPRAERWLSVFELATGA*EACLWV
Trigger: GACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAA...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCCTAAGTGCTGCCTGCTaGGCATCTGTGACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: RQEAMATAAAREGTLRAALSAAC*ASVTVP
Trigger: TGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAG...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGGGGGTGTTATATGGGTaGGAGGGGTCTGGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWGVLYG*EGSGGV
Trigger: AACTCCACCAGACCCCTCCAACCCATATAACACCCC...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS CCA 90 bp CTGGAAAGCCAGGGATCAAAATCCCTGCCGTCCATCTGGAGACACTaGGAGGAGGCGATGCTCCAGCAGAGGCAGGACCTGCTTACCTTG +
Preference number: 5 (lower is better)
Translates to: LESQGSKSLPSIWRH*EEAMLQQRQDLLTL
Trigger: CAAGGTAAGCAGGTCCTGCCTCTGCTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCTGGCTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTATTGCAAAACGCCTGTaGCGGGTGCACCGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: RWLWKHFARPRPGRQASVIAKRL*RVHRGA
Trigger: TGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAAT...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CAA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGATGCAGGCGAAGAACTaGGCCTGGTGCCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGMQAKN*AWCPLM
Trigger: CATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCAT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCACTCGTCCGGGGAGGAGATGTAGCACGGGATCATGGGGCAGCGCGTGATCTGTTCTCACTGACCGCTTaGGCCCTGATCACTGCAAAA +
Preference number: 5 (lower is better)
Translates to: ALVRGGDVARDHGAARDLFSLTA*ALITAK
Trigger: TTTTGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAA...CAGATCACGCGCTGCCCCATGATCCCGTGCTACATCTCCTCCCCGGACGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp CTTGATGCAGGCGAAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACGATTCCAGCCCAGTGTaGCTCGCAAGCCGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: LDAGEELGLVPVDVLLCDDSSPV*LASRAP
Trigger: CGGGGCTCGGCTTGCGAGCAACACTGGGCTGGAATC...GTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCATCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTG +
Preference number: 5 (lower is better)
Translates to: RQEAMATAAAREGTLRAAEPSLL*MQAKNL
Trigger: CAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTC...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATACAGGTGCTTTGGGGTaGCCGCTGAATAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHTGALG*PLNRTG
Trigger: GCCTGTTCTATTCAGCGGCAACCCCAAAGCACCTGT...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGACAGGTGCTTTGGGGTaGCCGCTGAATAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGTGALG*PLNRTG
Trigger: GCCTGTTCTATTCAGCGGCAACCCCAAAGCACCTGT...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGAGGGGTCTGGTGGAGTaGTATATACTGAAATCACAT +
Preference number: 5 (lower is better)
Translates to: VRCWELMVGTGAMGALARRGLVE*YILKSH
Trigger: ATGTGATTTCAGTATATACAACTCCACCAGACCCCT...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTTCTCACTGACCGCTTaGGCCCTGATCACTGCATCG +
Preference number: 5 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGFSLTA*ALITAS
Trigger: CGATGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 90 bp GTCGTCCCTGTGGGATTTGTTCCGGGACCCTACCCTGGGATGTCCTaGGTTGTTTATCCCAAGTTGGTTGAGCACGGAAAGGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: VVPVGFVPGPYPGMS*VVYPKLVEHGKGDW
Trigger: CCAGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCACAGGGACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 90 bp CGCTTTGGCCCTGATCACTGCATCGCTTCGAGGAGAATCGAACACTaGAGAATAGACAGGCCGCTGTCGTCCCTGTGGGATTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: RFGPDHCIASRRIEH*RIDRPLSSLWDLFR
Trigger: CCGGAACAAATCCCACAGGGACGACAGCGGCCTGTCTATTCTCCAGTGTTCGATTCTCCTCGAAGCGATGCAGTGATCAGGGCCAAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 90 bp TCCCAGAGCCTGGTCTTAGATCAGGAGCCGGGGATTAACGGGTCCTaGAAAGCCAGGGATCAAAATCCCTGCCGTCCATCTGGAGACACT +
Preference number: 5 (lower is better)
Translates to: SQSLVLDQEPGINGS*KARDQNPCRPSGDT
Trigger: AGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCTGGCTTTCCAGGACCCGTTAATCCCCGGCTCCTGATCTAAGACCAGGCTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp AGGCAAGAAGCAATGGCAACCGCAGCAGCTAGGGAAGGGACCTTGAGGGCAGCCTTCTCACTGACCGCTTaGGCCCTGATCACTACATCT +
Preference number: 5 (lower is better)
Translates to: RQEAMATAAAREGTLRAAFSLTA*ALITTS
Trigger: AGATGTAGTGATCAGGGCCAAAGCGGTCAGTGAGAA...GGCTGCCCTCAAGGTCCCTTCCCTAGCTGCTGCGGTTGCCATTGCTTCTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CAA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTTTGGCCTGGTGCCCGTaGATGTTCTTCTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: RWLWKHFARPRPGRQASVLAWCP*MFFSVT
Trigger: GGTCACAGAGAAGAACATCAACGGGCACCAGGCCAA...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCATGCAGGCGAAGAACTaGGCCTGGTGCCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: PSQDERDLVGLLHSLATTMQAKN*AWCPLM
Trigger: CATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCAT...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGCAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 5 (lower is better)
Translates to: VRCWELMVGTGAMGALARQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GTCAGGTGCTGGGAGCTCATGGTGGGCACCGGGGCGATGGGAGCACTTGCCAGGAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: VRCWELMVGTGAMGALARKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...CCTGGCAAGTGCTCCCATCGCCCCGGTGCCCACCATGAGCTCCCAGCACCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGGGGTGTTATATGGGTaGGAGGGGTCTGGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: RWLWKHFARPRPGRQASVGVLYG*EGSGGV
Trigger: AACTCCACCAGACCCCTCCAACCCATATAACACCCC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGGAGGGAACACTAAGCCTGGGTTCTCACTGACCGCTTaGGCCCTGATCAAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PRAERWLSVFEGGNTKPGFSLTA*ALIKQQ
Trigger: TTGCTGCTTGATCAGGGCCAAAGCGGTCAGTGAGAA...CCCAGGCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATCGTTCTGCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585421.5
CDS-3UTR CAA 90 bp CTGGTCCCAGACTCACTGGGAGTGACCCAGGGTGGGAGGTGCCCAGCACTCAGCAGGAAAAACTTGCTTTaGATTTCATGCTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: LVPDSLGVTQGGRCPALSRKNLL*ISCWAQ
Trigger: CTGTGCCCAGCATGAAATCAAAAGCAAGTTTTTCCT...GCTGAGTGCTGGGCACCTCCCACCCTGGGTCACTCCCAGTGAGTCTGGGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CCA 90 bp AGGAGAATCGAACACTGGAGAATAGACAGGCCGCTGTCGTCCCTGTaGGATTTGTTCCGGGACCCTACCCTGGGATGTCCTGGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: RRIEHWRIDRPLSSL*DLFRDPTLGCPGLF
Trigger: AAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCACAGGGACGACAGCGGCCTGTCTATTCTCCAGTGTTCGATTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CAA 90 bp AAGAACTTGGCCTGGTGCCCGTTGATGTTCTTCTCTGTGACCCAGTCCATCCAGATGCAGGCGAAGAACTaGGCCTGGTGCCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: KNLAWCPLMFFSVTQSIQMQAKN*AWCPLM
Trigger: CATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCAT...CTGGATGGACTGGGTCACAGAGAAGAACATCAACGGGCACCAGGCCAAGTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTG +
Preference number: 5 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFEPSLL*MQAKNL
Trigger: CAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTC...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTG +
Preference number: 5 (lower is better)
Translates to: RWLWKHFARPRPGRQASVEPSLL*MQAKNL
Trigger: CAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGAGGAGCAGGTGTTCAGGTATTCTCAACACACAGACCCCACATAGACACCAACTTGGCCACAGGGGCGTaGGAGGCCTGCTTATGGGTC +
Preference number: 5 (lower is better)
Translates to: RGAGVQVFSTHRPHIDTNLATGA*EACLWV
Trigger: GACCCATAAGCAGGCCTCCAACGCCCCTGTGGCCAA...GTTGGTGTCTATGTGGGGTCTGTGTGTTGAGAATACCTGAACACCTGCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGC +
Preference number: 5 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEDGCQS*REGTLS
Trigger: GCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATC...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGC +
Preference number: 5 (lower is better)
Translates to: RWLWKHFARPRPGRQASVDGCQS*REGTLS
Trigger: GCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATC...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GGCAGGGGCCGATTCCTGGATACCCTCCCAGTCTGCCCTAGAAAGGGAAGTCATCTGGGATGTCCTGGGTaGTTTATCCCAAGTTGGTTG +
Preference number: 5 (lower is better)
Translates to: GRGRFLDTLPVCPRKGSHLGCPG*FIPSWL
Trigger: CAACCAACTTGGGATAAACAACCCAGGACATCCCAG...ATGACTTCCCTTTCTAGGGCAGACTGGGAGGGTATCCAGGAATCGGCCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 90 bp TTCCGGGACCCTACCCTGGGATGTCCTGGGTTGTTTATCCCAAGTTaGTTGAGCACGGAAAGGGTGACTGGGAATAAGAGAAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: FRDPTLGCPGLFIPS*LSTERVTGNKRRQP
Trigger: AGGCTGCCTTCTCTTATTCCCAGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CAA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCGGCTTTGGAAGCATTTaGCAAGACCACGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFGFGSI*QDHAQA
Trigger: GGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCC...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GGAAGCTGCAGAAAACAAGGGCCATGTCCCTCTCAAGATGAAAGGGACCTGGTAGGCTTTGGAAGCATTTaGCAAGACCACGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GSCRKQGPCPSQDERDLVGFGSI*QDHAQA
Trigger: GGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCC...TACCAGGTCCCTTTCATCTTGAGAGGGACATGGCCCTTGTTTTCTGCAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCTGGCGTCACATGCAGAAAGCCCCGTGCAGAACGATGGCTGTCAGTCTTTGAGCAGGCTAAGGTGGCTTaGGAAGCATTTTGCAAGACC +
Preference number: 5 (lower is better)
Translates to: AGVTCRKPRAERWLSVFEQAKVA*EAFCKT
Trigger: GGTCTTGCAAAATGCTTCCAAAGCCACCTTAGCCTG...CTCAAAGACTGACAGCCATCGTTCTGCACGGGGCTTTCTGCATGTGACGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCAGCCTCAGGACAGGACCTCACCGATTCCTCCTGCAAGCTGGGGAGCATGTGGAGGGGTCTGGTGGAGTaGTATATACTGAAATCACAT +
Preference number: 5 (lower is better)
Translates to: AASGQDLTDSSCKLGSMWRGLVE*YILKSH
Trigger: ATGTGATTTCAGTATATACAACTCCACCAGACCCCT...CCACATGCTCCCCAGCTTGCAGGAGGAATCGGTGAGGTCCTGTCCTGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS GCA 90 bp GAGATATTCCTTCTTTCCTCCAACGTCCAGCGAGACCCCACACACTaGCGAGGAGGGGGCCGTGTAGATAAACTCTATATCCTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: EIFLLSSNVQRDPTH*RGGGRVDKLYILLR
Trigger: CCTGAGAAGGATATAGAGTTTATCTACACGGCCCCCTCCTCGGCAGTGTGTGGGGTCTCGCTGGACGTTGGAGGAAAGAAGGAATATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
ENST00000592761.2
CDS-3UTR CAA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAAACTTTCTCTCCTCTTaGTCTCGGGGGCGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSNFLSS*SRGREG
Trigger: CCCCTCGCGCCCCCGAGACAAAGAGGAGAGAAAGTT...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CAA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTACTAAGTGCTGCCTGCTaGGCATCTGTGACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLLSAAC*ASVTVP
Trigger: TGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAG...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: PSQDERDLVGLLHSLATTACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS GCA 90 bp TCCAGAGTCCACTTCCTTCTCACTGACCGCTTTGGCCCTGATCACTaGAAAACACAAGACACAGAGGTGAGGAGAGTTCCTGAAACACGC +
Preference number: 5 (lower is better)
Translates to: SRVHFLLTDRFGPDH*KTQDTEVRRVPETR
Trigger: GCGTGTTTCAGGAACTCTCCTCACCTCTGTGTCTTGTGTTTTGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAAGGAAGTGGACTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586057.5
ENST00000592761.2
CDS-3UTR CAA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGGGCAGCGCGTGATCTaGCACTCGCAGCCCATCTGG +
Preference number: 5 (lower is better)
Translates to: GGRKQEILLIITEKVLPIGQRVI*HSQPIW
Trigger: CCAGATGGGCTGCGAGTGCAAGATCACGCGCTGCCC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGAGGAGCAGGTGTTCAGGTATTCTCAACACACAGACCCCACATAGACACCAACTTGGCCTGGTGCCCGTaGATGTTCTTCTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: RGAGVQVFSTHRPHIDTNLAWCP*MFFSVT
Trigger: GGTCACAGAGAAGAACATCAACGGGCACCAGGCCAA...GTTGGTGTCTATGTGGGGTCTGTGTGTTGAGAATACCTGAACACCTGCTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTGTCTTAACAGGTGCTTaGGGGTTGCCGCTGAATAGA +
Preference number: 5 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCVLTGA*GLPLNR
Trigger: TCTATTCAGCGGCAACCCCAAAGCACCTGTTAAGAC...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGGGGGTGTTATATGGGTaGGAGGGGTCTGGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAGVLYG*EGSGGV
Trigger: AACTCCACCAGACCCCTCCAACCCATATAACACCCC...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CTGAGGCTGGAACGCAGCTCAGCTGGGGTTTCTCGCTCCCATTTCTACAAGGCTACATGCGCAGTCTGCTaGTCAACTTTCAACAACTCT +
Preference number: 5 (lower is better)
Translates to: LRLERSSAGVSRSHFYKATCAVC*STFNNS
Trigger: AGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGT...AGCCTTGTAGAAATGGGAGCGAGAAACCCCAGCTGAGCTGCGTTCCAGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCGTTGTTTATCCCAAGTaGGTTGAGCACGGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: PSQDERDLVGLLHSLATTVVYPK*VEHGKG
Trigger: ACCCTTTCCGTGCTCAACCAACTTGGGATAAACAAC...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CAA 90 bp GGTCAAAGGCTCTGTCCCCAGCCAGACAGCCTTACTCTTGGGATGACTCTACCTAAGCCACACAGGCGTTaGCACTTGCACATTTGTAGA +
Preference number: 5 (lower is better)
Translates to: GQRLCPQPDSLTLGMTLPKPHRR*HLHICR
Trigger: TCTACAAATGTGCAAGTGCAAACGCCTGTGTGGCTT...AGGTAGAGTCATCCCAAGAGTAAGGCTGTCTGGCTGGGGACAGAGCCTTTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp CCCCGAGGTCATCGGCAACTAGCAATTTGGCCAAGGAACCCTAGGCTACAAGAGTTCAGAATTCCTGTTTaGAACATGCGGAGAAGGGGC +
Preference number: 5 (lower is better)
Translates to: PRGHRQLAIWPRNPRLQEFRIPV*NMRRRG
Trigger: GCCCCTTCTCCGCATGTTCAAAACAGGAATTCTGAA...CTCTTGTAGCCTAGGGTTCCTTGGCCAAATTGCTAGTTGCCGATGACCTCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACTTGGCCTGGTGCCCGTaGATGTTCTTCTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHLAWCP*MFFSVT
Trigger: GGTCACAGAGAAGAACATCAACGGGCACCAGGCCAA...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGC +
Preference number: 5 (lower is better)
Translates to: INRIDGAPSRTSHWFQAADGCQS*REGTLS
Trigger: GCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATC...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCCCACGGACCGAGCGATaGCTCAAGAATGATACAAAG +
Preference number: 5 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRPRTER*LKNDTK
Trigger: CTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGG...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCTCAAAAGTTTCTTCTCACTGACCGCTTaGGCCCTGATCACTGCAAAA +
Preference number: 5 (lower is better)
Translates to: ERDLVGLLHSLATTLKSFFSLTA*ALITAK
Trigger: TTTTGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAA...GAAACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586057.5
CDS-3UTR CAA 90 bp TTCATGCTGGGCACAGAGGAGTTTCGCTTAACATACGTGTGGCTGGAGACTATGCAGGGTTTCGCCATGTaGGTGAGGCTGATTTCCAAC +
Preference number: 5 (lower is better)
Translates to: FMLGTEEFRLTYVWLETMQGFAM*VRLISN
Trigger: GTTGGAAATCAGCCTCACCAACATGGCGAAACCCTG...CATAGTCTCCAGCCACACGTATGTTAAGCGAAACTCCTCTGTGCCCAGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGGGCAGCGCGTGATCTaGCACTCGCAGCCCATCTGG +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHGQRVI*HSQPIW
Trigger: CCAGATGGGCTGCGAGTGCAAGATCACGCGCTGCCC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTG +
Preference number: 5 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSEPSLL*MQAKNL
Trigger: CAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTC...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGGCCTGCTACACAGTCTaGCAACGACCCTCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAACYTV*QRPSKV
Trigger: AACTTTTGAGGGTCGTTGCAAGACTGTGTAGCAGGC...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GCTAAGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: AKVALEAFCKTTPRPPSFKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...GAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGGTGGCTTTGGAAGCATTTTGCAAGACCACGCCCAGGCCGCCAAGCTTCGGTTCAAGCTTCGGTTTCATaGCGTGTGTATGTTTACATA +
Preference number: 5 (lower is better)
Translates to: RWLWKHFARPRPGRQASVQASVS*RVYVYI
Trigger: TATGTAAACATACACACGCAATGAAACCGAAGCTTG...AACCGAAGCTTGGCGGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTACAGGCTAAGGTGGCTTaGGAAGCATTTTGCAAGACC +
Preference number: 5 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLQAKVA*EAFCKT
Trigger: GGTCTTGCAAAATGCTTCCAAAGCCACCTTAGCCTG...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGGTCTTAACAGGTGCTTaGGGGTTGCCGCTGAATAGA +
Preference number: 5 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAVLTGA*GLPLNR
Trigger: TCTATTCAGCGGCAACCCCAAAGCACCTGTTAAGAC...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ACACTAAGCCTGGGAGGGCACAGCAAGACCCAGCTTTTTCTGTCCTCAGGATGTACATGCGCAGTCTGCTaGTCAACTTTCAACAACTCT +
Preference number: 5 (lower is better)
Translates to: TLSLGGHSKTQLFLSSGCTCAVC*STFNNS
Trigger: AGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGT...ACATCCTGAGGACAGAAAAAGCTGGGTCTTGCTGTGCCCTCCCAGGCTTAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCATGCTCTTACTCTCACAGGACCTGCTTACCTaGCACTCGCAGCCCATCTGG +
Preference number: 5 (lower is better)
Translates to: LLFLEATGNRAEFMLLLSQDLLT*HSQPIW
Trigger: CCAGATGGGCTGCGAGTGCAAGGTAAGCAGGTCCTG...TGAGAGTAAGAGCATGAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCATGCAGGCGAAGAACTaGGCCTGGTGCCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: GGRKQEILLIITEKVLPIMQAKN*AWCPLM
Trigger: CATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCAT...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCTCTCCCCATACAGCTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCGAGCCGTCACTTCTCTaGATGCAGGCGAAGAACTTG +
Preference number: 5 (lower is better)
Translates to: SLPIQLLFLEATGNRAEFEPSLL*MQAKNL
Trigger: CAAGTTCTTCGCCTGCATCAAGAGAAGTGACGGCTC...GAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAGCTGTATGGGGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp CCCTCTCAAGATGAAAGGGACCTGGTAGGCCTGCTACACAGTCTTGCAACGACCCAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 5 (lower is better)
Translates to: PSQDERDLVGLLHSLATTQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...GGTCGTTGCAAGACTGTGTAGCAGGCCTACCAGGTCCCTTTCATCTTGAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCTATCGGCTTTGGAAGCATTTaGCAAGACCACGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GGRKQEILLIITEKVLPIGFGSI*QDHAQA
Trigger: GGCCTGGGCGTGGTCTTGCAAAATGCTTCCAAAGCC...GATAGGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCAGGCTAAGGTGGCTTaGGAAGCATTTTGCAAGACC +
Preference number: 5 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHQAKVA*EAFCKT
Trigger: GGTCTTGCAAAATGCTTCCAAAGCCACCTTAGCCTG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCACAGGTGCTTTGGGGTaGCCGCTGAATAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: HRWEETRDSPYHYRESSSTGALG*PLNRTG
Trigger: GCCTGTTCTATTCAGCGGCAACCCCAAAGCACCTGT...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCGGGGTGTTATATGGGTaGGAGGGGTCTGGTGGAGTT +
Preference number: 5 (lower is better)
Translates to: HRWEETRDSPYHYRESSSGVLYG*EGSGGV
Trigger: AACTCCACCAGACCCCTCCAACCCATATAACACCCC...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCACTGGCTTCAGGAAACCACACTGAGGGAACACATAGGTTCCCTAGTTCCCTAAACTTTCAACAACTCTaGTGTGTTCCCAGCACCGGA +
Preference number: 5 (lower is better)
Translates to: SLASGNHTEGTHRFPSSLNFQQL*CVPSTG
Trigger: TCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTT...TAGGGAACTAGGGAACCTATGTGTTCCCTCAGTGTGGTTTCCTGAAGCCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp GTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCACATGCGCAGTCTGCTaGTCAACTTTCAACAACTCT +
Preference number: 5 (lower is better)
Translates to: VHGPSDCSRMIQSIRDMRTCAVC*STFNNS
Trigger: AGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGT...GCGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCCACGGACCGAGCGATaGCTCAAGAATGATACAAAG +
Preference number: 5 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHPRTER*LKNDTK
Trigger: CTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGG...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCAATCACTACATCTGCATaGCAAAACGCCTGTTGCGGG +
Preference number: 5 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSITTSA*QNACCG
Trigger: CCCGCAACAGGCGTTTTGCAATGCAGATGTAGTGAT...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS-3UTR CAA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAACTAAGTGCTGCCTGCTaGGCATCTGTGACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKLSAAC*ASVTVP
Trigger: TGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAG...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGACATGCGCAGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACAACTTTCAACAACTCTaGTGTGTTCCCAGCACCGGA +
Preference number: 5 (lower is better)
Translates to: RHAQSACQLSTTLVCSQHNFQQL*CVPSTG
Trigger: TCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTT...GTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGACATGCGCAGTCTGCTaGTCAACTTTCAACAACTCT +
Preference number: 5 (lower is better)
Translates to: CPRTERLLKNDTKHQRHATCAVC*STFNNS
Trigger: AGAGTTGTTGAAAGTTGACAAGCAGACTGCGCATGT...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCTCTTAAAACAGGCCATAGTGTCCTGGAGGCTGAGAAAGAAGTGAGTGTGTCACCACGGACCGAGCGATaGCTCAAGAATGATACAAAG +
Preference number: 5 (lower is better)
Translates to: SLKTGHSVLEAEKEVSVSPRTER*LKNDTK
Trigger: CTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGG...TGACACACTCACTTCTTTCTCAGCCTCCAGGACACTATGGCCTGTTTTAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATATCGTCAGTTTATCTTTACAACACAGGTGGGAGGAAACAAGAGATTCTCCTTTCGTCCCTGTGGGATTaGTTCCGGGACCCTACCCTG +
Preference number: 5 (lower is better)
Translates to: ISSVYLYNTGGRKQEILLSSLWD*FRDPTL
Trigger: CAGGGTAGGGTCCCGGAACAAATCCCACAGGGACGA...AAGGAGAATCTCTTGTTTCCTCCCACCTGTGTTGTAAAGATAAACTGACGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CAA 90 bp CTCCTTTTTCTGGAAGCTACAGGTAACAGAGCTGAATTCATGCTCTTACTCTCACAGGTGTGCTTCCCTTaGGGCCATCTTCTACCTTCC +
Preference number: 5 (lower is better)
Translates to: LLFLEATGNRAEFMLLLSQVCFP*GHLLPS
Trigger: GGAAGGTAGAAGATGGCCCAAAGGGAAGCACACCTG...TGAGAGTAAGAGCATGAATTCAGCTCTGTTACCTGTAGCTTCCAGAAAAAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAATTGGCCTGGTGCCCGTaGATGTTCTTCTCTGTGACC +
Preference number: 5 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKLAWCP*MFFSVT
Trigger: GGTCACAGAGAAGAACATCAACGGGCACCAGGCCAA...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATATGCAGGCGAAGAACTaGGCCTGGTGCCCGTTGATG +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHMQAKN*AWCPLM
Trigger: CATCAACGGGCACCAGGCCAAGTTCTTCGCCTGCAT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CACAGGTGGGAGGAAACAAGAGATTCTCCTTATCATTACCGAGAAAGTTCTTCCCAGGCTAAGGTGGCTTaGGAAGCATTTTGCAAGACC +
Preference number: 5 (lower is better)
Translates to: HRWEETRDSPYHYRESSSQAKVA*EAFCKT
Trigger: GGTCTTGCAAAATGCTTCCAAAGCCACCTTAGCCTG...GGAAGAACTTTCTCGGTAATGATAAGGAGAATCTCTTGTTTCCTCCCACCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTAATAGGATTGATGGGGCTCCTTCAAGAACTAGCCACTGGTTCCAGGCTGCCAGGGGTCTGGTGGAGTaGTATATACTGAAATCACAT +
Preference number: 5 (lower is better)
Translates to: INRIDGAPSRTSHWFQAARGLVE*YILKSH
Trigger: ATGTGATTTCAGTATATACAACTCCACCAGACCCCT...GGCAGCCTGGAACCAGTGGCTAGTTCTTGAAGGAGCCCCATCAATCCTATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TTCATGCTGGGCACAGAGGAGTTTCGCTTAACATACGTGTGGCTGGAGACTATGCACAGGCGTTTGCACTaGCACATTTGTAGAAAATTC +
Preference number: 5 (lower is better)
Translates to: FMLGTEEFRLTYVWLETMHRRLH*HICRKF
Trigger: GAATTTTCTACAAATGTGCAAGTGCAAACGCCTGTG...CATAGTCTCCAGCCACACGTATGTTAAGCGAAACTCCTCTGTGCCCAGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS-3UTR CAA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCCTAAGTGCTGCCTGCTaGGCATCTGTGACGGTGCCA +
Preference number: 5 (lower is better)
Translates to: HLRNTSRSWYICNSGSPILSAAC*ASVTVP
Trigger: TGGCACCGTCACAGATGCCAAGCAGGCAGCACTTAG...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TGTCCACGGACCGAGCGATTGCTCAAGAATGATACAAAGCATCAGAGACATGCGCAAGCTTCGGTTTCATaGCGTGTGTATGTTTACATA +
Preference number: 5 (lower is better)
Translates to: CPRTERLLKNDTKHQRHAQASVS*RVYVYI
Trigger: TATGTAAACATACACACGCAATGAAACCGAAGCTTG...CGCATGTCTCTGATGCTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATACAGGTGCTTTGGGGTaGCCGCTGAATAGAACAGGC +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHTGALG*PLNRTG
Trigger: GCCTGTTCTATTCAGCGGCAACCCCAAAGCACCTGT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATGATGGCTGTCAGTCTTaGAGGGAGGGAACACTAAGC +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHDGCQS*REGTLS
Trigger: GCTTAGTGTTCCCTCCCTCAAAGACTGACAGCCATC...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp TCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: SACQLSTTLVCSQHRKVSKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...TGAGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AGTCTGCTTGTCAACTTTCAACAACTCTTGTGTGTTCCCAGCACCGGAAGGTCTCAAGCTTCGGTTTCATaGCGTGTGTATGTTTACATA +
Preference number: 5 (lower is better)
Translates to: SLLVNFQQLLCVPSTGRSQASVS*RVYVYI
Trigger: TATGTAAACATACACACGCAATGAAACCGAAGCTTG...AGACCTTCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTTGACAAGCAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAACCACGGACCGAGCGATaGCTCAAGAATGATACAAAG +
Preference number: 5 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKPRTER*LKNDTK
Trigger: CTTTGTATCATTCTTGAGCAATCGCTCGGTCCGTGG...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAACTTTCAACAACTCTaGTGTGTTCCCAGCACCGGA +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHNFQQL*CVPSTG
Trigger: TCCGGTGCTGGGAACACACAAGAGTTGTTGAAAGTT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATTTTATCCCAAGTTGGTaGAGCACGGAAAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHFIPSW*STERVT
Trigger: AGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAA...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS-3UTR CAA 90 bp AATTTGAACTGGAGAACCAAAGACGGGAGACGAATGAAAGCAAAGATGCTCAAACAGAATCATATTAATTaGGACCCATGGGATGAGTGT +
Preference number: 5 (lower is better)
Translates to: NLNWRTKDGRRMKAKMLKQNHIN*DPWDEC
Trigger: ACACTCATCCCATGGGTCCAAATTAATATGATTCTG...TTTGAGCATCTTTGCTTTCATTCGTCTCCCGTCTTTGGTTCTCCAGTTCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAGGGGTCTGGTGGAGTaGTATATACTGAAATCACAT +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHRGLVE*YILKSH
Trigger: ATGTGATTTCAGTATATACAACTCCACCAGACCCCT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp ATTTTGAGTTGCTTGCAGGATGAAAATAGGAGAAGAGAGCTGTGCTTAGAACATAAATACAAGCAGAAGTaGGTATATCTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: ILSCLQDENRRRELCLEHKYKQK*VYLQLR
Trigger: CCTGAGTTGCAGATATACCAACTTCTGCTTGTATTT...ATGTTCTAAGCACAGCTCTCTTCTCCTATTTTCATCCTGCAAGCAACTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS-3UTR CAA 90 bp CATTTAAGAAATACAAGCAGAAGTTGGTATATCTGCAACTCAGGTTCACCTATCCAAGCTTCGGTTTCATaGCGTGTGTATGTTTACATA +
Preference number: 5 (lower is better)
Translates to: HLRNTSRSWYICNSGSPIQASVS*RVYVYI
Trigger: TATGTAAACATACACACGCAATGAAACCGAAGCTTG...GATAGGTGAACCTGAGTTGCAGATATACCAACTTCTGCTTGTATTTCTTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS GCA 72 bp TGCAAAACGCCTGTTGCGGGTGCACCGGGGAGCAGCTaGAGGCGTCGGCCGGGCGAAGCAGCGTCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: CKTPVAGAPGSS*RRRPGEAASPA
Trigger: TGCTGGCGACGCTGCTTCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS TCA 72 bp GACAGCAGCAAGGTGCGAGACGGGCAAGGGGCATGGTaGTCCCAGCCCCCGGCATGGCGTCTCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: DSSKVRDGQGAW*SQPPAWRLLLQ
Trigger: CTGGAGGAGGAGACGCCATGCCGGGGGCTGGGATCACCATGCCCCTTGCCCGTCTCGCACCTTGCTGCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS TCA 72 bp TCAAGCAGCAAGGTGCGAGACGGGCAAGGGGCATGGTaGTCCCAGCCCCCGGCATGGCGTCTCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SSSKVRDGQGAW*SQPPAWRLLLQ
Trigger: CTGGAGGAGGAGACGCCATGCCGGGGGCTGGGATCACCATGCCCCTTGCCCGTCTCGCACCTTGCTGCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585421.5
CDS CAA 90 bp GACCGCTTTGGCCCTGATCACTACATCTGCATTGCAAAACGCCTGTaGCGGGTGCACCGGGGAGCAGCTGCAGGCGTCGGCCGGGCGAAG +
Preference number: 6 (lower is better)
Translates to: DRFGPDHYICIAKRL*RVHRGAAAGVGRAK
Trigger: CTTCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGATGTAGTGATCAGGGCCAAAGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS GCA 72 bp ATCACTACATCTGCATTGCAAAACGCCTGTTGCGGGTaGACCGGGGAGCAGCTGCAGGCGTCGGCCGGGCGA +
Preference number: 6 (lower is better)
Translates to: ITTSALQNACCG*TGEQLQASAGR
Trigger: TCGCCCGGCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGATGTAGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS CAA 72 bp GGCCCTGATCACTACATCTGCATTGCAAAACGCCTGTaGCGGGTGCACCGGGGAGCAGCTGCAGGCGTCGGC +
Preference number: 6 (lower is better)
Translates to: GPDHYICIAKRL*RVHRGAAAGVG
Trigger: GCCGACGCCTGCAGCTGCTCCCCGGTGCACCCGCAACAGGCGTTTTGCAATGCAGATGTAGTGATCAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS GCA 72 bp CCCTGCCGTCCATCTGGAGACACTGGGAGGAGGCGATaGTCCAGCAGAGGCAGGACCTGCTTACCTTGCACT +
Preference number: 6 (lower is better)
Translates to: PCRPSGDTGRRR*SSRGRTCLPCT
Trigger: AGTGCAAGGTAAGCAGGTCCTGCCTCTGCTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS GCA 72 bp ACTGGGAGGAGGCGATGCTCCAGCAGAGGCAGGACCTaGTTACCTTGCACTCGCAGCCCATCTGGTACCTGT +
Preference number: 6 (lower is better)
Translates to: TGRRRCSSRGRT*LPCTRSPSGTC
Trigger: ACAGGTACCAGATGGGCTGCGAGTGCAAGGTAAGCAGGTCCTGCCTCTGCTGGAGCATCGCCTCCTCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CCA 72 bp CAGGGATCAAAATCCCTGCCGTCCATCTGGAGACACTaGGAGGAGGCGATGCTCCAGCAGAGGCAGGACCTG +
Preference number: 6 (lower is better)
Translates to: QGSKSLPSIWRH*EEAMLQQRQDL
Trigger: CAGGTCCTGCCTCTGCTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CCA 72 bp CAGCCCATCTGGTACCTGTGGTTCAGGCTCTTCTTCTaGGTGGTGCTCAGGGTGTCCCAGGGCACGATGAAG +
Preference number: 6 (lower is better)
Translates to: QPIWYLWFRLFF*VVLRVSQGTMK
Trigger: CTTCATCGTGCCCTGGGACACCCTGAGCACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
ENST00000592761.2
CDS CCA 72 bp CGCGTGATCTTGCACTCGCAGCCCATCTGGTACCTGTaGTTCAGGCTCTTCTTCTGGGTGGTGCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: RVILHSQPIWYL*FRLFFWVVLRV
Trigger: CACCCTGAGCACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTGCAAGATCACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS CCA 72 bp ATGGGGCAGCGCGTGATCTTGCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTCTTCTTCTGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: MGQRVILHSQPI*YLWFRLFFWVV
Trigger: CACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTGCAAGATCACGCGCTGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
CDS CCA 72 bp CTGGAAAGCCAGGGATCAAAATCCCTGCCGTCCATCTaGAGACACTGGGAGGAGGCGATGCTCCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LESQGSKSLPSI*RHWEEAMLQQR
Trigger: CCTCTGCTGGAGCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCTGGCTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CAA 72 bp TGGAGAATAGACAGGCCGCTGTCGTCCCTGTGGGATTaGTTCCGGGACCCTACCCTGGGATGTCCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: WRIDRPLSSLWD*FRDPTLGCPGL
Trigger: CAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCACAGGGACGACAGCGGCCTGTCTATTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 72 bp GAACACTGGAGAATAGACAGGCCGCTGTCGTCCCTGTaGGATTTGTTCCGGGACCCTACCCTGGGATGTCCT +
Preference number: 6 (lower is better)
Translates to: EHWRIDRPLSSL*DLFRDPTLGCP
Trigger: AGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCACAGGGACGACAGCGGCCTGTCTATTCTCCAGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 72 bp AGGCAGGACCTGCTTACCTTGCACTCGCAGCCCATCTaGTACCTGTGGTTCAGGCTCTTCTTCTGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: RQDLLTLHSQPI*YLWFRLFFWVV
Trigger: CACCACCCAGAAGAAGAGCCTGAACCACAGGTACCAGATGGGCTGCGAGTGCAAGGTAAGCAGGTCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS GCA 72 bp ATTAACGGGTCCTGGAAAGCCAGGGATCAAAATCCCTaGCGTCCATCTGGAGACACTGGGAGGAGGCGATGC +
Preference number: 6 (lower is better)
Translates to: INGSWKARDQNP*RPSGDTGRRRC
Trigger: GCATCGCCTCCTCCCAGTGTCTCCAGATGGACGGCAGGGATTTTGATCCCTGGCTTTCCAGGACCCGTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CAA 72 bp TCGTTTCCAGAGTCCACTTCCTTCTCACTGACCGCTTaGGCCCTGATCAAGCAGCAAGGTGCGAGACGGGCA +
Preference number: 6 (lower is better)
Translates to: SFPESTSFSLTA*ALIKQQGARRA
Trigger: TGCCCGTCTCGCACCTTGCTGCTTGATCAGGGCCAAAGCGGTCAGTGAGAAGGAAGTGGACTCTGGAAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585421.5
CDS CAA 90 bp CGGGACCCTACCCTGGGATGTCCTGGGTTGTTTATCCCAAGTTGGTaGAGCACGGAAAGGGTGACTGGGAATAAGAGAAGGCAGCCTGGT +
Preference number: 6 (lower is better)
Translates to: RDPTLGCPGLFIPSW*STERVTGNKRRQPG
Trigger: ACCAGGCTGCCTTCTCTTATTCCCAGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CAA 90 bp ATCGAACACTGGAGAATAGACAGGCCGCTGTCGTCCCTGTGGGATTaGTTCCGGGACCCTACCCTGGGATGTCCTGGGTTGTTTATCCCA +
Preference number: 6 (lower is better)
Translates to: IEHWRIDRPLSSLWD*FRDPTLGCPGLFIP
Trigger: TGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCACAGGGACGACAGCGGCCTGTCTATTCTCCAGTGTTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 72 bp CCTGATCACTGCATCGCTTCGAGGAGAATCGAACACTaGAGAATAGACAGGCCGCTGTCGTCCCTGTGGGAT +
Preference number: 6 (lower is better)
Translates to: PDHCIASRRIEH*RIDRPLSSLWD
Trigger: ATCCCACAGGGACGACAGCGGCCTGTCTATTCTCCAGTGTTCGATTCTCCTCGAAGCGATGCAGTGATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 72 bp CTGGTCTTAGATCAGGAGCCGGGGATTAACGGGTCCTaGAAAGCCAGGGATCAAAATCCCTGCCGTCCATCT +
Preference number: 6 (lower is better)
Translates to: LVLDQEPGINGS*KARDQNPCRPS
Trigger: AGATGGACGGCAGGGATTTTGATCCCTGGCTTTCCAGGACCCGTTAATCCCCGGCTCCTGATCTAAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592761.2
CDS CAA 72 bp CAGGGCACGATGAAGTCACAGAGGGTGATGTGCATCTaGCCGTCCCCCTCGGCCTTTCCTGCAATGAGATAT +
Preference number: 6 (lower is better)
Translates to: QGTMKSQRVMCI*PSPSAFPAMRY
Trigger: ATATCTCATTGCAGGAAAGGCCGAGGGGGACGGCAAGATGCACATCACCCTCTGTGACTTCATCGTGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262768.11
ENST00000536189.6
ENST00000585421.5
ENST00000586057.5
ENST00000592761.2
CDS CAA 90 bp TCCCTGTGGGATTTGTTCCGGGACCCTACCCTGGGATGTCCTGGGTaGTTTATCCCAAGTTGGTTGAGCACGGAAAGGGTGACTGGGAAT +
Preference number: 6 (lower is better)
Translates to: SLWDLFRDPTLGCPG*FIPSWLSTERVTGN
Trigger: ATTCCCAGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCACAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CCA 72 bp GTGGGATTTGTTCCGGGACCCTACCCTGGGATGTCCTaGGTTGTTTATCCCAAGTTGGTTGAGCACGGAAAG +
Preference number: 6 (lower is better)
Translates to: VGFVPGPYPGMS*VVYPKLVEHGK
Trigger: CTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CAA 72 bp GATTTGTTCCGGGACCCTACCCTGGGATGTCCTGGGTaGTTTATCCCAAGTTGGTTGAGCACGGAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: DLFRDPTLGCPG*FIPSWLSTERV
Trigger: CACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGGGTCCCGGAACAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CAA 72 bp TCGTTTCCAGAGTCCACTTCCTTCTCACTGACCGCTTaGGCCCTGATCACTGCATCGCTTCGAGGAGAATCG +
Preference number: 6 (lower is better)
Translates to: SFPESTSFSLTA*ALITASLRGES
Trigger: CGATTCTCCTCGAAGCGATGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAAGGAAGTGGACTCTGGAAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS GCA 72 bp CACTTCCTTCTCACTGACCGCTTTGGCCCTGATCACTaGAAAACACAAGACACAGAGGTGAGGAGAGTTCCT +
Preference number: 6 (lower is better)
Translates to: HFLLTDRFGPDH*KTQDTEVRRVP
Trigger: AGGAACTCTCCTCACCTCTGTGTCTTGTGTTTTGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAAGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586057.5
ENST00000592761.2
CDS CCA 72 bp CCTACCCTGGGATGTCCTGGGTTGTTTATCCCAAGTTaGTTGAGCACGGAAAGGGTGACTGGGAATAAGAGA +
Preference number: 6 (lower is better)
Translates to: PTLGCPGLFIPS*LSTERVTGNKR
Trigger: TCTCTTATTCCCAGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CAA 72 bp TCGTTTCCAGAGTCCACTTCCTTCTCACTGACCGCTTaGGCCCTGATCACTACATCTGCATTGCAAAACGCC +
Preference number: 6 (lower is better)
Translates to: SFPESTSFSLTA*ALITTSALQNA
Trigger: GGCGTTTTGCAATGCAGATGTAGTGATCAGGGCCAAAGCGGTCAGTGAGAAGGAAGTGGACTCTGGAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262768.11
CDS CAA 72 bp ACCCTGGGATGTCCTGGGTTGTTTATCCCAAGTTGGTaGAGCACGGAAAGGGTGACTGGGAATAAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: TLGCPGLFIPSW*STERVTGNKRR
Trigger: CCTTCTCTTATTCCCAGTCACCCTTTCCGTGCTCAACCAACTTGGGATAAACAACCCAGGACATCCCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536189.6
CDS CAA 72 bp TCGTTTCCAGAGTCCACTTCCTTCTCACTGACCGCTTaGGCCCTGATCACTGCAAAACACAAGACACAGAGG +
Preference number: 6 (lower is better)
Translates to: SFPESTSFSLTA*ALITAKHKTQR
Trigger: CCTCTGTGTCTTGTGTTTTGCAGTGATCAGGGCCAAAGCGGTCAGTGAGAAGGAAGTGGACTCTGGAAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586057.5
ENST00000592761.2