Pregenerated sensors for TIMMDC1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272662Ensembl transcript IDs: ENST00000609598.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGGAAGGCTTCTCTAATGTTGGCAGAGTAGGTTGGACTTGTTTTTaGACAAATCGCCTTTCCCTCTTTCCCTACTCCACTTGCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: LEGFSNVGRVGWTCF*TNRLSLFPYSTCTE Trigger: TTCAGTGCAAGTGGAGTAGGGAAAGAGGGAAAGGCGATTTGTGCAAAAACAAGTCCAACCTACTCTGCCAACATTAGAGAAGCCTTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609598.1 |
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| CDS GCA 90 bp | ACTTGTTTTTGCACAAATCGCCTTTCCCTCTTTCCCTACTCCACTTaGACTGAATATTGCACTTTCTTCCTTACTGAAGCGGGATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TCFCTNRLSLFPYST*TEYCTFFLTEAGFL Trigger: CAGGAATCCCGCTTCAGTAAGGAAGAAAGTGCAATATTCAGTGCAAGTGGAGTAGGGAAAGAGGGAAAGGCGATTTGTGCAAAAACAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609598.1 |
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| CDS GCA 72 bp | TGCACAAATCGCCTTTCCCTCTTTCCCTACTCCACTTaGACTGAATATTGCACTTTCTTCCTTACTGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CTNRLSLFPYST*TEYCTFFLTEA Trigger: CGCTTCAGTAAGGAAGAAAGTGCAATATTCAGTGCAAGTGGAGTAGGGAAAGAGGGAAAGGCGATTTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609598.1 |
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| CDS GCA 72 bp | TTCTCTAATGTTGGCAGAGTAGGTTGGACTTGTTTTTaGACAAATCGCCTTTCCCTCTTTCCCTACTCCACT | + |
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Preference number: 6 (lower is better) Translates to: FSNVGRVGWTCF*TNRLSLFPYST Trigger: AGTGGAGTAGGGAAAGAGGGAAAGGCGATTTGTGCAAAAACAAGTCCAACCTACTCTGCCAACATTAGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609598.1 |
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| CDS CAA 72 bp | AGCAGAGGTTGTAGTGACGGCAAATTATACAAACACTaGATAGAAATTCCAGAAATTCTCCTGCCTTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SRGCSDGKLYKH*IEIPEILLPFE Trigger: CTCAAAAGGCAGGAGAATTTCTGGAATTTCTATCAAGTGTTTGTATAATTTGCCGTCACTACAACCTCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609598.1 |
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