Pregenerated sensors for TIMM8A (Homo sapiens)
Ensembl gene IDs: ENSG00000126953Ensembl transcript IDs: ENST00000644112.2, ENST00000645279.1, ENST00000647480.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTACATTAAGGGAGATCTGTCCTTGGCAAGCAGAACACGTTGTTaGCAAGCTGCAAATACCTTCCACCCTTTTGCCAAAGTCCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: VYIKGDLSLASRTRC*QAANTFHPFAKVPS Trigger: TGAGGGGACTTTGGCAAAAGGGTGGAAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTTAATGTACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CCA 90 bp | GCCTCTGAATTCTGTGAATTGTGTACATTAAGGGAGATCTGTCCTTaGCAAGCAGAACACGTTGTTGGCAAGCTGCAAATACCTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: ASEFCELCTLREICP*QAEHVVGKLQIPST Trigger: GGTGGAAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTTAATGTACACAATTCACAGAATTCAGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CCA 90 bp | AATAAGTATGTACGTTGGAAGAGATTACACCACTTTTATAGTTACTaGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTTAGAACTGGG | + |
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Preference number: 1 (lower is better) Translates to: NKYVRWKRLHHFYSY*AGATHFSAERVRTG Trigger: CCCAGTTCTAACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATAAAAGTGGTGTAATCTCTTCCAACGTACATACTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CCA 90 bp | GGTATTACACAACAATCCAACAAGAAAGCAAATAAGTATGTACGTTaGAAGAGATTACACCACTTTTATAGTTACTGGGCTGGAGCCACT | + |
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Preference number: 1 (lower is better) Translates to: GITQQSNKKANKYVR*KRLHHFYSYWAGAT Trigger: AGTGGCTCCAGCCCAGTAACTATAAAAGTGGTGTAATCTCTTCCAACGTACATACTTATTTGCTTTCTTGTTGGATTGTTGTGTAATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR TCA 90 bp | TCCAGCAATACTGTAAGTTTATGGGAAAGGGCCTATGGAAACCAATaGCTGTATATAGTTCAAGTTAAGTGGTTCAAAAATTTCGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SSNTVSLWERAYGNQ*LYIVQVKWFKNFVH Trigger: ATGAACGAAATTTTTGAACCACTTAACTTGAACTATATACAGTCATTGGTTTCCATAGGCCCTTTCCCATAAACTTACAGTATTGCTGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCAAATACCTTCCACCCTTTTGCCAAAGTCCCCTCACAGGGCAGGCTCAATCAACCTCGGGTGCCTaGAAGTGCTGGGTGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SCKYLPPFCQSPLTGQAQSTSGA*KCWVSS Trigger: ACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGA...TTGAGCCTGCCCTGTGAGGGGACTTTGGCAAAAGGGTGGAAGGTATTTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATGAAGGTAAATCCCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTGAGCCGAGGTCCGGAATaGCAGTCCCCAGAGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: VMKVNPEESRNSRFTDSLSRGPE*QSPEKR Trigger: CCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCT...CAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGGGATTTACCTTCATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACAAGCTTCAACCTCGGGTaGCTGAAAGTGCTGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: QGRLNSSTFRPKTAWYYTSFNLG*LKVLGV Trigger: GACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCT...TGTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CAA 90 bp | CAAGCAGAACACGTTGTTGGCAAGCTGCAAATACCTTCCACCCTTTaGCCAAAGTCCCCTCACAGGGCAGGCTCAATTCCTCAACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QAEHVVGKLQIPSTL*PKSPHRAGSIPQPS Trigger: TGAAGGTTGAGGAATTGAGCCTGCCCTGTGAGGGGACTTTGGCAAAAGGGTGGAAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR GCA 90 bp | GTAATGAAGGTAAATCCCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTGAGCTTCAACCTCGGGTaGCTGAAAGTGCTGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VMKVNPEESRNSRFTDSLSFNLG*LKVLGV Trigger: GACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCT...CAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGGGATTTACCTTCATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR-3UTR CCA 90 bp | TATAGTTACTGGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTTAGAACTGGGGTGCTGGGTGTCCAGTaGCATAAGTCTTCTTTGATA | + |
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Preference number: 2 (lower is better) Translates to: YSYWAGATHFSAERVRTGVLGVQ*HKSSLI Trigger: TATCAAAGAAGACTTATGCCACTGGACACCCAGCAC...CCCAGTTCTAACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCATAGTCCAGCAATACTGTAAGTTTATGGGAAAGGGCCTATGGAAACCAGGCATAAGTCTTCTTTaGTACCCAGTCCTCTACACC | + |
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Preference number: 2 (lower is better) Translates to: GVIVQQYCKFMGKGLWKPGISLL*YPVLYT Trigger: GGTGTAGAGGACTGGGTATCAAAGAAGACTTATGCC...TGGTTTCCATAGGCCCTTTCCCATAAACTTACAGTATTGCTGGACTATGACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATGAAGGTAAATCCCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTGGGCATAAGTCTTCTTTaGTACCCAGTCCTCTACACC | + |
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Preference number: 2 (lower is better) Translates to: VMKVNPEESRNSRFTDSLGISLL*YPVLYT Trigger: GGTGTAGAGGACTGGGTATCAAAGAAGACTTATGCC...CAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGGGATTTACCTTCATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR-3UTR CCA 90 bp | GTAATGAAGGTAAATCCCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTGGTGCTGGGTGTCCAGTaGCATAAGTCTTCTTTGATA | + |
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Preference number: 2 (lower is better) Translates to: VMKVNPEESRNSRFTDSLVLGVQ*HKSSLI Trigger: TATCAAAGAAGACTTATGCCACTGGACACCCAGCAC...CAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGGGATTTACCTTCATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR CAA 90 bp | CTCACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTaGGTATTACACAACAATCCAACAAGAAAGCAAATAAGTATGTAC | + |
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Preference number: 2 (lower is better) Translates to: LTGQAQFLNLQTQNG*VLHNNPTRKQISMY Trigger: GTACATACTTATTTGCTTTCTTGTTGGATTGTTGTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAAATTTCGTTCATTATTCTCTGCCATGTACACAAGCCTCAGACCCTCTAATGATTCACTGACTCTCTaGGACTCGGGCTGCCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: QKFRSLFSAMYTSLRPSNDSLTL*DSGCQK Trigger: TTTTTGGCAGCCCGAGTCCCAGAGAGTCAGTGAATC...ATTAGAGGGTCTGAGGCTTGTGTACATGGCAGAGAATAATGAACGAAATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR TCA 72 bp | CCCAGTCCTCTACACCAACAAAGCCGAGGTCCGGAATaGCAGTCCCCAGAGAAGCGGAGTCACCCTTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PSPLHQQSRGPE*QSPEKRSHPSP Trigger: GGGAGAAGGGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTAGAGGACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGTACTGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAATGGCATAAGTCTTCTTaGATACCCAGTCCTCTACAC | + |
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Preference number: 3 (lower is better) Translates to: SQYWGLRSVLVTSTRQLQWHKSS*IPSPLH Trigger: GTGTAGAGGACTGGGTATCAAAGAAGACTTATGCCA...TTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCAGTACTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR GCA 72 bp | TCTGTCCTTGGCAAGCAGAACACGTTGTTGGCAAGCTaGAAATACCTTCCACCCTTTTGCCAAAGTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: SVLGKQNTLLAS*KYLPPFCQSPL Trigger: GAGGGGACTTTGGCAAAAGGGTGGAAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CCA 72 bp | CCCAGGCTTGTCCATGCACTTCTCTTTTATAGTTACTaGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: PRLVHALLFYSY*AGATHFSAERV Trigger: AACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATAAAAGAGAAGTGCATGGACAAGCCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645279.1 |
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| 3UTR TCA 72 bp | CCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTaGCTCTCTGGGACTCGGGCTGCCAAAAATAAAATC | + |
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Preference number: 3 (lower is better) Translates to: PRSPGIADSLIH*LSGTRAAKNKI Trigger: GATTTTATTTTTGGCAGCCCGAGTCCCAGAGAGTCAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| 3UTR CCA 72 bp | AAGGGAGATCTGTCCTTGGCAAGCAGAACACGTTGTTaGCAAGCTGCAAATACCTTCCACCCTTTTGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: KGDLSLASRTRC*QAANTFHPFAK Trigger: TTTGGCAAAAGGGTGGAAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CCA 72 bp | GTACGTTGGAAGAGATTACACCACTTTTATAGTTACTaGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: VRWKRLHHFYSY*AGATHFSAERV Trigger: AACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATAAAAGTGGTGTAATCTCTTCCAACGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CCA 72 bp | TTCTGTGAATTGTGTACATTAAGGGAGATCTGTCCTTaGCAAGCAGAACACGTTGTTGGCAAGCTGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: FCELCTLREICP*QAEHVVGKLQI Trigger: TATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTTAATGTACACAATTCACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAAATTTCGTTCATTATTCTCTGCCATGTACACAAGCCTCAGACCCTCTAATCAAGGAAAATTATCCTaGGCCTCTGAATTCTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: QKFRSLFSAMYTSLRPSNQGKLS*ASEFCE Trigger: TTCACAGAATTCAGAGGCCAAGGATAATTTTCCTTG...ATTAGAGGGTCTGAGGCTTGTGTACATGGCAGAGAATAATGAACGAAATTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR-3UTR CAA 90 bp | CAAAAATTTCGTTCATTATTCTCTGCCATGTACACAAGCCTCAGACCCTCTAATTCTGAATTCTGTGAATaGTGTACATTAAGGGAGATC | + |
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Preference number: 3 (lower is better) Translates to: QKFRSLFSAMYTSLRPSNSEFCE*CTLREI Trigger: GATCTCCCTTAATGTACACAATTCACAGAATTCAGA...ATTAGAGGGTCTGAGGCTTGTGTACATGGCAGAGAATAATGAACGAAATTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR TCA 90 bp | TGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAACCTCGGGTGTCCGATCAGTCTTGGTaGCCAGCACTAGGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: WGLRSVLVTSTRQLQPRVSDQSW*PALGSF Trigger: GAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGA...CACCCGAGGTTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR TCA 90 bp | TCCCAGTACTGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAATCAACCTCGGGTGCCTaGAAGTGCTGGGTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SQYWGLRSVLVTSTRQLQSTSGA*KCWVSS Trigger: ACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGA...TTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCAGTACTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCCCTCACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCGGGATTACAGGCGGGTaGCACCCCGCCCAGCTAATT | + |
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Preference number: 4 (lower is better) Translates to: QSPLTGQAQFLNLQTQNGGITGG*HPAQLI Trigger: AATTAGCTGGGCGGGGTGGCACCCGCCTGTAATCCC...GCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGTGAGGGGACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR GCA 90 bp | TACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCGCCCAGGCTTGTCCATaGACTTCTCCTGCTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: YTNKAEVRNDSPQRSGVTAQACP*TSPAQD Trigger: GTCCTGAGCAGGAGAAGTGCATGGACAAGCCTGGGC...GGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCTTCAACCTCGGGTGCCTGAAAGTGCTGGGTGTCCAGTGGCATAAGTCTTCCGATCAGTCTTGGTaGCCAGCACTAGGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSFNLGCLKVLGVQWHKSSDQSW*PALGSF Trigger: GAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGA...AGACTTATGCCACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR GCA 90 bp | GGCAGCTTCAACCTCGGGTGCCTGAAAGTGCTGGGTGTCCAGTGGCATAAGTCTAGCTTCAACCTCGGGTaGCTGAAAGTGCTGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GSFNLGCLKVLGVQWHKSSFNLG*LKVLGV Trigger: GACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCT...AGACTTATGCCACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR TCA 90 bp | TTCTTTGATACCCAGTCCTCTACACCAACAAAGCCGAGGTCCGGAATGACAGTCAGCCGAGGTCCGGAATaGCAGTCCCCAGAGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: FFDTQSSTPTKPRSGMTVSRGPE*QSPEKR Trigger: CCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCT...GACTGTCATTCCGGACCTCGGCTTTGTTGGTGTAGAGGACTGGGTATCAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR TCA 90 bp | GGCAGCTTCAACCTCGGGTGCCTGAAAGTGCTGGGTGTCCAGTGGCATAAGTCTGATTCACTGATTCACTaGCTCTCTGGGACTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GSFNLGCLKVLGVQWHKSDSLIH*LSGTRA Trigger: AGCCCGAGTCCCAGAGAGTCAGTGAATCAGTGAATC...AGACTTATGCCACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR GCA 90 bp | GGCAGCTTCAACCTCGGGTGCCTGAAAGTGCTGGGTGTCCAGTGGCATAAGTCTTACCTTCCACCCTTTTaGCAAAGTCCCCTCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSFNLGCLKVLGVQWHKSYLPPF*QSPLTG Trigger: CCCTGTGAGGGGACTTTGGCAAAAGGGTGGAAGGTA...AGACTTATGCCACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | TGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAACCTCGGGTGATAAAATCCCAGTACTaGGGGCTCCGATCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: WGLRSVLVTSTRQLQPRVIKSQY*GLRSVL Trigger: CAAGACTGATCGGAGCCCCCAGTACTGGGATTTTAT...CACCCGAGGTTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR GCA 90 bp | TACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCTTCAAGCCATTCTCGTaGCTCAGCTTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: YTNKAEVRNDSPQRSGVTFKPFS*LSFLSS Trigger: GCTACTCAGGAAGCTGAGGCACGAGAATGGCTTGAA...GGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR TCA 90 bp | TACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCGGCATAAGTCTTCTTTaGTACCCAGTCCTCTACACC | + |
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Preference number: 4 (lower is better) Translates to: YTNKAEVRNDSPQRSGVTGISLL*YPVLYT Trigger: GGTGTAGAGGACTGGGTATCAAAGAAGACTTATGCC...GGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR CCA 90 bp | ACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCCGTGCTGGGTGTCCAGTaGCATAAGTCTTCTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: TPTKPRSGMTVPREAESPVLGVQ*HKSSLI Trigger: TATCAAAGAAGACTTATGCCACTGGACACCCAGCAC...GGGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR CCA 90 bp | CAAAGTCCCCTCACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCGATTCACTGACTCTCTaGGACTCGGGCTGCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: QSPLTGQAQFLNLQTQNGDSLTL*DSGCQK Trigger: TTTTTGGCAGCCCGAGTCCCAGAGAGTCAGTGAATC...GCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGTGAGGGGACTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CAA 72 bp | CACGTTGTTGGCAAGCTGCAAATACCTTCCACCCTTTaGCCAAAGTCCCCTCACAGGGCAGGCTCAATTCCT | + |
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Preference number: 4 (lower is better) Translates to: HVVGKLQIPSTL*PKSPHRAGSIP Trigger: AGGAATTGAGCCTGCCCTGTGAGGGGACTTTGGCAAAAGGGTGGAAGGTATTTGCAGCTTGCCAACAACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR GCA 90 bp | TATAGTTACTGGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTTAGAACTGGGAGCTTCAACCTCGGGTaGCTGAAAGTGCTGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: YSYWAGATHFSAERVRTGSFNLG*LKVLGV Trigger: GACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCT...CCCAGTTCTAACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR CCA 90 bp | GTCCTCTACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTGCTGGGTGTCCAGTaGCATAAGTCTTCTTTGATA | + |
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Preference number: 4 (lower is better) Translates to: VLYTNKAEVRNDSPQRSGVLGVQ*HKSSLI Trigger: TATCAAAGAAGACTTATGCCACTGGACACCCAGCAC...TCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTAGAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR TCA 90 bp | AAGGGAGATCTGTCCTTGGCAAGCAGAACACGTTGTTGGCAAGCTGCAAATACCGATTCACTGATTCACTaGCTCTCTGGGACTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KGDLSLASRTRCWQAANTDSLIH*LSGTRA Trigger: AGCCCGAGTCCCAGAGAGTCAGTGAATCAGTGAATC...GGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR GCA 90 bp | CAAAGTCCCCTCACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTCCATGCACTTCTCCTaGTCAGGACAAGATACAGAA | + |
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Preference number: 4 (lower is better) Translates to: QSPLTGQAQFLNLQTQNGSMHFS*SGQDTE Trigger: TTCTGTATCTTGTCCTGAGCAGGAGAAGTGCATGGA...GCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGTGAGGGGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACACAGGCTGGAGTGCAGTaGCATGATCTCACTGTAACC | + |
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Preference number: 4 (lower is better) Translates to: QGRLNSSTFRPKTAWYYTQAGVQ*HDLTVT Trigger: GGTTACAGTGAGATCATGCCACTGCACTCCAGCCTG...TGTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCAAATACCTTCCACCCTTTTGCCAAAGTCCCCTCACAGGGCAGGCTCAACATAGGGCCAGAAAATaGCAGAGCTGGGATATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SCKYLPPFCQSPLTGQAQHRARK*QSWDIP Trigger: TGGAATATCCCAGCTCTGCCATTTTCTGGCCCTATG...TTGAGCCTGCCCTGTGAGGGGACTTTGGCAAAAGGGTGGAAGGTATTTGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | TACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCCAAAGAGGAAAACTGTaGCACAGAGATACTTTACCC | + |
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Preference number: 4 (lower is better) Translates to: YTNKAEVRNDSPQRSGVTQRGKL*HRDTLP Trigger: GGGTAAAGTATCTCTGTGCCACAGTTTTCCTCTTTG...GGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | TACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCCTCTTTTATAGTTACTaGGCTGGAGCCACTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: YTNKAEVRNDSPQRSGVTLFYSY*AGATHF Trigger: AAAATGAGTGGCTCCAGCCCAGTAACTATAAAAGAG...GGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645279.1 |
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| 3UTR CAA 72 bp | CTGAAAGTGCTGGGTGTCCAGTGGCATAAGTCTTCTTaGATACCCAGTCCTCTACACCAACAAAGCCGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LKVLGVQWHKSS*IPSPLHQQSRG Trigger: ACCTCGGCTTTGTTGGTGTAGAGGACTGGGTATCAAAGAAGACTTATGCCACTGGACACCCAGCACTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR TCA 90 bp | CAAAAATTTCGTTCATTATTCTCTGCCATGTACACAAGCCTCAGACCCTCTAATAGCCGAGGTCCGGAATaGCAGTCCCCAGAGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QKFRSLFSAMYTSLRPSNSRGPE*QSPEKR Trigger: CCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCT...ATTAGAGGGTCTGAGGCTTGTGTACATGGCAGAGAATAATGAACGAAATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACGGCATAAGTCTTCTTTaGTACCCAGTCCTCTACACC | + |
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Preference number: 4 (lower is better) Translates to: TGQAQFLNLQTQNGLVLHGISLL*YPVLYT Trigger: GGTGTAGAGGACTGGGTATCAAAGAAGACTTATGCC...GTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | TATAGTTACTGGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTTAGAACTGGGAGGGAGATCTGTCCTTaGCAAGCAGAACACGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: YSYWAGATHFSAERVRTGREICP*QAEHVV Trigger: AACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCT...CCCAGTTCTAACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTACTGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAAAATACTGTAAGTTTATaGGAAAGGGCCTATGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SQYWGLRSVLVTSTRQLQNTVSL*ERAYGN Trigger: GTTTCCATAGGCCCTTTCCCATAAACTTACAGTATT...TTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCAGTACTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACAAGAATCAAAGCACTCTaGTCCAAGGCAGACCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: QGRLNSSTFRPKTAWYYTRIKAL*SKADQS Trigger: ACTCTGGTCTGCCTTGGACCAGAGTGCTTTGATTCT...TGTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTACTGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAACTGATAGTTCACATTTaGCAGCTGACCAAGTATATA | + |
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Preference number: 4 (lower is better) Translates to: SQYWGLRSVLVTSTRQLQLIVHI*QLTKYI Trigger: TATATACTTGGTCAGCTGCCAAATGTGAACTATCAG...TTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCAGTACTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR GCA 90 bp | ACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACACGTTGTTGGCAAGCTaGAAATACCTTCCACCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TGQAQFLNLQTQNGLVLHTLLAS*KYLPPF Trigger: AAAGGGTGGAAGGTATTTGCAGCTTGCCAACAACGT...GTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCTTCAACCTCGGGTGCCTGAAAGTGCTGGGTGTCCAGTGGCATAAGTCTAAGGAAAATTATCCTTaGCCTCTGAATTCTGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: GSFNLGCLKVLGVQWHKSKENYP*PLNSVN Trigger: ATTCACAGAATTCAGAGGCCAAGGATAATTTTCCTT...AGACTTATGCCACTGGACACCCAGCACTTTCAGGCACCCGAGGTTGAAGCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR TCA 90 bp | CAAAAATTTCGTTCATTATTCTCTGCCATGTACACAAGCCTCAGACCCTCTAATACTCCTGACCTCAAGTaGTCCACCCGCCTCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QKFRSLFSAMYTSLRPSNTPDLK*STRLPK Trigger: CTTTGGGAGGCGGGTGGATCACTTGAGGTCAGGAGT...ATTAGAGGGTCTGAGGCTTGTGTACATGGCAGAGAATAATGAACGAAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | GTAATGAAGGTAAATCCCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTGATAAAATCCCAGTACTaGGGGCTCCGATCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VMKVNPEESRNSRFTDSLIKSQY*GLRSVL Trigger: CAAGACTGATCGGAGCCCCCAGTACTGGGATTTTAT...CAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGGGATTTACCTTCATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR CCA 90 bp | ACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACCACTTTTATAGTTACTaGGCTGGAGCCACTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: TGQAQFLNLQTQNGLVLHHFYSY*AGATHF Trigger: AAAATGAGTGGCTCCAGCCCAGTAACTATAAAAGTG...GTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTTGGTATTACACAAGACCCAAAACGGCTTaGTATTACACAACAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: QGRLNSSTFRPKTAWYYTRPKTA*YYTTIQ Trigger: TTGGATTGTTGTGTAATACCAAGCCGTTTTGGGTCT...TGTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | GAGATCTGTCCTTGGCAAGCAGAACACGTTGTTGGCAAGCTGCAAATACCTTCCATGGGAAAGGGCCTATaGAAACCAATGACTGTATAT | + |
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Preference number: 4 (lower is better) Translates to: EICPWQAEHVVGKLQIPSMGKGL*KPMTVY Trigger: ATATACAGTCATTGGTTTCCATAGGCCCTTTCCCAT...GGAAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CCA 90 bp | GTAATGAAGGTAAATCCCGAGGAGTCCAGGAATAGCAGATTCACTGATTCACTGAGAAAATGGCAGAGCTaGGATATTCCAGAGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VMKVNPEESRNSRFTDSLRKWQS*DIPEQE Trigger: TTCTTGCTCTGGAATATCCCAGCTCTGCCATTTTCT...CAGTGAATCAGTGAATCTGCTATTCCTGGACTCCTCGGGATTTACCTTCATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CAA 72 bp | CAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCTaGGTATTACACAACAATCCAACAAGAAAGCAAATA | + |
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Preference number: 4 (lower is better) Translates to: QAQFLNLQTQNG*VLHNNPTRKQI Trigger: TATTTGCTTTCTTGTTGGATTGTTGTGTAATACCAAGCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| 3UTR CAA 72 bp | CAAGGAAAATTATCCTTGGCCTCTGAATTCTGTGAATaGTGTACATTAAGGGAGATCTGTCCTTGGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QGKLSLASEFCE*CTLREICPWQA Trigger: TGCTTGCCAAGGACAGATCTCCCTTAATGTACACAATTCACAGAATTCAGAGGCCAAGGATAATTTTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS TCA 90 bp | TCTTTGATACCCAGTCCTCTACACCAACAAAGCCGAGGTCCGGAATaGCAGTCCCCAGAGAAGCGGAGTCACCCTTCTCCCATCCGGCTA | + |
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Preference number: 5 (lower is better) Translates to: SLIPSPLHQQSRGPE*QSPEKRSHPSPIRL Trigger: TAGCCGGATGGGAGAAGGGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTAGAGGACTGGGTATCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000644112.2 ENST00000645279.1 ENST00000647480.1 |
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| CDS-3UTR CAA 90 bp | ACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCCGGCAAGCAGAACACGTaGTTGGCAAGCTGCAAATAC | + |
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Preference number: 5 (lower is better) Translates to: TPTKPRSGMTVPREAESPGKQNT*LASCKY Trigger: GTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCC...GGGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | TTCTTTGATACCCAGTCCTCTACACCAACAAAGCCGAGGTCCGGAATGACAGTCGGGCTCCGATCAGTCTaGGTGACCAGCACTAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FFDTQSSTPTKPRSGMTVGLRSV*VTSTRQ Trigger: CTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCC...GACTGTCATTCCGGACCTCGGCTTTGTTGGTGTAGAGGACTGGGTATCAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR CAA 90 bp | TACACCAACAAAGCCGAGGTCCGGAATGACAGTCCCCAGAGAAGCGGAGTCACCAAGGGAGATCTGTCCTaGGCAAGCAGAACACGTTGT | + |
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Preference number: 5 (lower is better) Translates to: YTNKAEVRNDSPQRSGVTKGDLS*ASRTRC Trigger: ACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTT...GGTGACTCCGCTTCTCTGGGGACTGTCATTCCGGACCTCGGCTTTGTTGGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTACTGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAAAAGCAGAACACGTTGTaGGCAAGCTGCAAATACCTT | + |
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Preference number: 5 (lower is better) Translates to: SQYWGLRSVLVTSTRQLQKQNTL*ASCKYL Trigger: AAGGTATTTGCAGCTTGCCAACAACGTGTTCTGCTT...TTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCAGTACTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAACCTCGGGTGACTGATAGTTCACATTaGGCAGCTGACCAAGTATAT | + |
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Preference number: 5 (lower is better) Translates to: WGLRSVLVTSTRQLQPRVTDSSH*AADQVY Trigger: ATATACTTGGTCAGCTGCCAAATGTGAACTATCAGT...CACCCGAGGTTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCATAGTCCAGCAATACTGTAAGTTTATGGGAAAGGGCCTATGGAAACCAGGGCTCCGATCAGTCTaGGTGACCAGCACTAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GVIVQQYCKFMGKGLWKPGLRSV*VTSTRQ Trigger: CTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCC...TGGTTTCCATAGGCCCTTTCCCATAAACTTACAGTATTGCTGGACTATGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTCCCCTCACAGGGCAGGCTCAATTCCTCAACCTTCAGACCCAAAACGGCCAGACCCAAAACGGCTaGGTATTACACAACAATCCA | + |
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Preference number: 5 (lower is better) Translates to: QSPLTGQAQFLNLQTQNGQTQNG*VLHNNP Trigger: TGGATTGTTGTGTAATACCAAGCCGTTTTGGGTCTG...GCCGTTTTGGGTCTGAAGGTTGAGGAATTGAGCCTGCCCTGTGAGGGGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | AAGGGAGATCTGTCCTTGGCAAGCAGAACACGTTGTTGGCAAGCTGCAAATACCATACCTTCCACCCTTTaGCCAAAGTCCCCTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: KGDLSLASRTRCWQAANTIPSTL*PKSPHR Trigger: CCTGTGAGGGGACTTTGGCAAAAGGGTGGAAGGTAT...GGTATTTGCAGCTTGCCAACAACGTGTTCTGCTTGCCAAGGACAGATCTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTACTGGGGGCTCCGATCAGTCTTGGTGACCAGCACTAGGCAGCTTCAACAAGGAAAATTATCCTaGGCCTCTGAATTCTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SQYWGLRSVLVTSTRQLQQGKLS*ASEFCE Trigger: TTCACAGAATTCAGAGGCCAAGGATAATTTTCCTTG...TTGAAGCTGCCTAGTGCTGGTCACCAAGACTGATCGGAGCCCCCAGTACTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | TATAGTTACTGGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTTAGAACTGGGTGGCATAAGTCTTCTTaGATACCCAGTCCTCTACAC | + |
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Preference number: 5 (lower is better) Translates to: YSYWAGATHFSAERVRTGWHKSS*IPSPLH Trigger: GTGTAGAGGACTGGGTATCAAAGAAGACTTATGCCA...CCCAGTTCTAACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000644112.2 ENST00000645279.1 |
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| CDS-3UTR CAA 90 bp | TATAGTTACTGGGCTGGAGCCACTCATTTTTCAGCGGAGAGGGTTAGAACTGGGTCTGAATTCTGTGAATaGTGTACATTAAGGGAGATC | + |
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Preference number: 5 (lower is better) Translates to: YSYWAGATHFSAERVRTGSEFCE*CTLREI Trigger: GATCTCCCTTAATGTACACAATTCACAGAATTCAGA...CCCAGTTCTAACCCTCTCCGCTGAAAAATGAGTGGCTCCAGCCCAGTAACTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCATAGTCCAGCAATACTGTAAGTTTATGGGAAAGGGCCTATGGAAACCAAATCACAAAGGGAACTaGGAAAGAAAAAGACGGTTG | + |
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Preference number: 5 (lower is better) Translates to: GVIVQQYCKFMGKGLWKPNHKGN*ERKRRL Trigger: CAACCGTCTTTTTCTTTCCAAGTTCCCTTTGTGATT...TGGTTTCCATAGGCCCTTTCCCATAAACTTACAGTATTGCTGGACTATGACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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| CDS-3UTR CAA 90 bp | CAAAAATTTCGTTCATTATTCTCTGCCATGTACACAAGCCTCAGACCCTCTAATTGGCATAAGTCTTCTTaGATACCCAGTCCTCTACAC | + |
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Preference number: 5 (lower is better) Translates to: QKFRSLFSAMYTSLRPSNWHKSS*IPSPLH Trigger: GTGTAGAGGACTGGGTATCAAAGAAGACTTATGCCA...ATTAGAGGGTCTGAGGCTTGTGTACATGGCAGAGAATAATGAACGAAATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644112.2 |
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