RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIMM22 (Homo sapiens)

Ensembl gene IDs: ENSG00000177370, ENSG00000278501

Ensembl transcript IDs: ENST00000327158.5, ENST00000613269.2, ENST00000617832.2

Found 551 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCACATGTGGCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTaGAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCG +
Preference number: 1 (lower is better)
Translates to: LHMWPQARPGPAVTS*RQCVPLGRHRRGPS
Trigger: CGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGCCACATGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp CTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTaGCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGG +
Preference number: 1 (lower is better)
Translates to: LKLGQVQQSRREGSV*LSAGTGGAHRVHGW
Trigger: CCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp GACGTCCTCTGTGAAGGCTGGCTGGAGTCCAGGAGCAGCAAAGTGTaGCTACCCCAAAGGCTGGAGGCAGAGAAGCCAGGCAGCTCCCTC +
Preference number: 1 (lower is better)
Translates to: DVLCEGWLESRSSKV*LPQRLEAEKPGSSL
Trigger: GAGGGAGCTGCCTGGCTTCTCTGCCTCCAGCCTTTGGGGTAGCCACACTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp GTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATaGGATTTCACTGCATCCCAGGAAAAGGCTGGGCTGGGCTTCTTG +
Preference number: 1 (lower is better)
Translates to: VCLSAGTGGAHRVHG*DFTASQEKAGLGFL
Trigger: CAAGAAGCCCAGCCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATaGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGCTGGGCTT +
Preference number: 1 (lower is better)
Translates to: QCVPLGRHRRGPSSS*MGFHCIPGKGWAGL
Trigger: AAGCCCAGCCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp TCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTTTaGGAGAGTCAGTGGCGTGAATATTGGCTCCCACCAGCCGAAGCA +
Preference number: 1 (lower is better)
Translates to: SACQRSWVSEGPPSL*ESQWREYWLPPAEA
Trigger: TGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTGACTCTCTCAAAGGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp AGGCCTCCGGATCAGCCAGCATCCAGGCTGCTTCTGGCTCACCTTTaGCATGTGCTGCTACAGTACAAATGTCCCACCTGGCCATCGGTG +
Preference number: 1 (lower is better)
Translates to: RPPDQPASRLLLAHL*HVLLQYKCPTWPSV
Trigger: CACCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCTGATCCGGAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp CTGGGTCTCCGAGGGCCCACCCTCCCTTTGAGAGAGTCAGTGGCGTaGATATTGGCTCCCACCAGCCGAAGCAACTGGACACTGAGTTTA +
Preference number: 1 (lower is better)
Translates to: LGLRGPTLPLRESVA*ILAPTSRSNWTLSL
Trigger: TAAACTCAGTGTCCAGTTGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTGACTCTCTCAAAGGGAGGGTGGGCCCTCGGAGACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp CGGATCAGCCAGCATCCAGGCTGCTTCTGGCTCACCTTTGCCATGTaGTGCTACAGTACAAATGTCCCACCTGGCCATCGGTGTGCCTTG +
Preference number: 1 (lower is better)
Translates to: RISQHPGCFWLTFAM*CYSTNVPPGHRCAL
Trigger: CAAGGCACACCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCTGATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp TCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTGAGAGAATCTaGCACGGGACGTCCTCTGTGAAGGCTGGCTGGAGTCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: SYMSTSCLPICCERI*HGTSSVKAGWSPGA
Trigger: TGCTCCTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGATGTTGACATATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp GCTCTTCACAAAGGCCTCCGGATCAGCCAGCATCCAGGCTGCTTCTaGCTCACCTTTGCCATGTGCTGCTACAGTACAAATGTCCCACCT +
Preference number: 1 (lower is better)
Translates to: ALHKGLRISQHPGCF*LTFAMCCYSTNVPP
Trigger: AGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCTGATCCGGAGGCCTTTGTGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp GGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTaGGAGAATCTGGCACGGGACGTCCTCTGTGAAGGCTGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: GAEFLYVNILSPDLL*ENLARDVLCEGWLE
Trigger: CTCCAGCCAGCCTTCACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp AGGAATTACCGTATTATAGGAAAAAGGAGACTCATCACCACTGGCTaGAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCTG +
Preference number: 1 (lower is better)
Translates to: RNYRIIGKRRLITTG*RCPALCGPHQATCL
Trigger: CAGGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGATGAGTCTCCTTTTTCCTATAATACGGTAATTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp ATCAGCCAGCATCCAGGCTGCTTCTGGCTCACCTTTGCCATGTGCTaGTACAGTACAAATGTCCCACCTGGCCATCGGTGTGCCTTGAAA +
Preference number: 1 (lower is better)
Translates to: ISQHPGCFWLTFAMC*YSTNVPPGHRCALK
Trigger: TTTCAAGGCACACCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp CCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTaGGCTGGGCTTCTTGAGGCAGGCCCTGGCAGATGTAATGAGCTT +
Preference number: 1 (lower is better)
Translates to: PSSSWMGFHCIPGKG*AGLLEAGPGRCNEL
Trigger: AAGCTCATTACATCTGCCAGGGCCTGCCTCAAGAAGCCCAGCCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp GACATGTTAAAACACTTCCTTGACCCTGGAGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGTCTGATCTTGGCCAGTAGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: DMLKHFLDPGERGWW*TAPQRRLILASSCC
Trigger: ACAGCAGCTACTGGCCAAGATCAGACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAACATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp TACAAACACTCGGGCCTCCAGGCCATGTACACTGAGTGTGAACGCTaGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: YKHSGLQAMYTECER*LRVCGPEDRADEEE
Trigger: TTCTTCCTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTACATGGCCTGGAGGCCCGAGTGTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp AGAAGCCAGGCAGCTCCCTCAGAATACCAACGACATGAGGGAAAATaGATGTCTTCAGGCCCTGAAGCAAGGCCCTGGTGTGGTACAGAA +
Preference number: 1 (lower is better)
Translates to: RSQAAPSEYQRHEGK*MSSGPEARPWCGTE
Trigger: TTCTGTACCACACCAGGGCCTTGCTTCAGGGCCTGAAGACATTCATTTTCCCTCATGTCGTTGGTATTCTGAGGGAGCTGCCTGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp CAACCTAGAGGGCCAGCTGTGGTCAGGCCTGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTGAGA +
Preference number: 1 (lower is better)
Translates to: QPRGPAVVRPEALWS*IPICQHPVSRSAVR
Trigger: TCTCACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp CTGGCTCCCCAGCCATCGAAAACAGGAAACTATTCATCTCTCGAGTaGATAGGCAGCGTGGACAATGCCTCGCTTACTGAACCGATGGGT +
Preference number: 1 (lower is better)
Translates to: LAPQPSKTGNYSSLE*IGSVDNASLTEPMG
Trigger: ACCCATCGGTTCAGTAAGCGAGGCATTGTCCACGCTGCCTATTCACTCGAGAGATGAATAGTTTCCTGTTTTCGATGGCTGGGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp TTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCACGGGACGTCCTCTGTGAAGGCTGGC +
Preference number: 1 (lower is better)
Translates to: FVELNSYMSTSCLPI*CERIWHGTSSVKAG
Trigger: GCCAGCCTTCACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp TTCCTTCAAAGTGGCATATCTTTGAGGCAGCCTTTTGGTCTAATCTaGTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTTTG +
Preference number: 1 (lower is better)
Translates to: FLQSGISLRQPFGLI*LSEKLGLRGPTLPL
Trigger: CAAAGGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 90 bp TGCCATGTGCTGCTACAGTACAAATGTCCCACCTGGCCATCGGTGTaGCTTGAAAGTGGCATGAAGTTGTCCACTGAACAGGAAGCGTCT +
Preference number: 1 (lower is better)
Translates to: CHVLLQYKCPTWPSV*LESGMKLSTEQEAS
Trigger: AGACGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTCAAGGCACACCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp GTCACCTCTGTGCCCACAACACCAAACAACCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGTGGAGCTGAATTCCTATATGTCAAC +
Preference number: 1 (lower is better)
Translates to: VTSVPTTPNNLEGQL*SGLKLCGAEFLYVN
Trigger: GTTGACATATAGGAATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAGGTTGTTTGGTGTTGTGGGCACAGAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp AGTGAGATAATTGGTTGGACGGCATCAGTCCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAG +
Preference number: 1 (lower is better)
Translates to: SEIIGWTASVRLALP*YSRRIVAWSSKVEQ
Trigger: CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCGTCCAACCAATTATCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp ATAGAGGAATTACCGTATTATAGGAAAAAGGAGACTCATCACCACTaGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTG +
Preference number: 1 (lower is better)
Translates to: IEELPYYRKKETHHH*LKVPSTVWPPPSDL
Trigger: CAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGATGAGTCTCCTTTTTCCTATAATACGGTAATTCCTCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp CTGGCTCACCTTTGCCATGTGCTGCTACAGTACAAATGTCCCACCTaGCCATCGGTGTGCCTTGAAAGTGGCATGAAGTTGTCCACTGAA +
Preference number: 1 (lower is better)
Translates to: LAHLCHVLLQYKCPT*PSVCLESGMKLSTE
Trigger: TTCAGTGGACAACTTCATGCCACTTTCAAGGCACACCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp TGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGCTAGACTaGAAGATGGAAGATCCCAGGCATCCTAGGACTTTGACAGGTACC +
Preference number: 1 (lower is better)
Translates to: CCEGSISCIWSHVLD*KMEDPRHPRTLTGT
Trigger: GGTACCTGTCAAAGTCCTAGGATGCCTGGGATCTTCCATCTTTCAGTCTAGCACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp AAGATGGAAGATCCCAGGCATCCTAGGACTTTGACAGGTACCAGGTaGGAATGTCTGCCCTTGCTTCAGAGTGCTTGTAGGTGTCCTATA +
Preference number: 1 (lower is better)
Translates to: KMEDPRHPRTLTGTR*ECLPLLQSACRCPI
Trigger: TATAGGACACCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCACCTGGTACCTGTCAAAGTCCTAGGATGCCTGGGATCTTCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp AGTACAAATGTCCCACCTGGCCATCGGTGTGCCTTGAAAGTGGCATaGAGTTGTCCACTGAACAGGAAGCGTCTTCTTTTATGTAAACGC +
Preference number: 1 (lower is better)
Translates to: STNVPPGHRCALKVA*SCPLNRKRLLLCKR
Trigger: GCGTTTACATAAAAGAAGACGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTCAAGGCACACCGATGGCCAGGTGGGACATTTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 90 bp CAGTGGCGTGAATATTGGCTCCCACCAGCCGAAGCAACTGGACACTaGGTTTATTCTGAAGATCAGGAACAGATGTCTCTGAAAATTGCT +
Preference number: 1 (lower is better)
Translates to: QWREYWLPPAEATGH*VYSEDQEQMSLKIA
Trigger: AGCAATTTTCAGAGACATCTGTTCCTGATCTTCAGAATAAACTCAGTGTCCAGTTGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 90 bp AGCGTCTTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTaGCATATCTTTGAGGCAGCCTTTTGGTCTAATCTGCTTGTCAGA +
Preference number: 1 (lower is better)
Translates to: SVFFYVNASLRFPSK*HIFEAAFWSNLLVR
Trigger: TCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAAGACGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGGTGCCCAGCACTGTGTaGCCCCCACCAAGCGACCTG +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQVPSTV*PPPSDL
Trigger: CAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCAC...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAACGGGACGTCCTCTGTaGAGGCTGGCTGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGTGRPL*RLAGVQ
Trigger: CTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGT...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGGCATCAGTCCGCCTTaGCCTGCCCTGGTATTCGAG +
Preference number: 2 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIGISPP*PALVFE
Trigger: CTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCC...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCGGCATCAGTCCGCCTTaGCCTGCCCTGGTATTCGAG +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAGISPP*PALVFE
Trigger: CTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCC...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGTCCTCTGTGAAGGCTaGCTGGAGTCCAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIVLCEG*LESRSS
Trigger: GCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGAC...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCGTCCTCTGTGAAGGCTaGCTGGAGTCCAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAVLCEG*LESRSS
Trigger: GCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGAC...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGAATGTCTTCAGGCCCTaGAGCAAGGCCCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQNVFRP*SKALVW
Trigger: CCACACCAGGGCCTTGCTTCAGGGCCTGAAGACATT...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCAAGCAGCACCAGTGCTaGAGCCCAACTGTAGACGGA +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAKQHQC*SPTVDG
Trigger: TCCGTCTACAGTTGGGCTTCAGCACTGGTGCTGCTT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGCCAAGAGCAAAGGCCTaGCTCCAGCAGTGTCATCCC +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQPRAKA*LQQCHP
Trigger: GGGATGACACTGCTGGAGTCAGGCCTTTGCTCTTGG...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPALEGQL*SGLKLC
Trigger: ACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAG...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGCGCTTACTGAACCGATaGGTACTGACAGCCCTGGCG +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQRLLNR*VLTALA
Trigger: CGCCAGGGCTGTCAGTACCCATCGGTTCAGTAAGCG...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCAGCTGTGGTCAGGCCTaGAGCTTTGTGGAGCTGAAT +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPASCGQA*SFVELN
Trigger: ATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGT +
Preference number: 2 (lower is better)
Translates to: APTGLAVMKPPSCETGRGERGWW*TAPQRR
Trigger: ACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTC...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCAGTCCGCCTTGCCCTaGCCTGGTATTCGAGACGGA +
Preference number: 2 (lower is better)
Translates to: APTGLAVMKPPSCETGRGQSALP*PGIRDG
Trigger: TCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: APTGLAVMKPPSCETGRGQATCL*PTQEQR
Trigger: CCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCCCCACCAAGCGACCTaGCTGTGCCCCACCCAAGAG +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPPHQAT*LCPTQE
Trigger: CTCTTGGGTGGGGCACAGGCAGGTCGCTTGGTGGGG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQLEGQL*SGLKLC
Trigger: ACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAG...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CAA 90 bp GCTGGGCTGGGCTTCTTGAGGCAGGCCCTGGCAGATGTAATGAGCTaGGTGAGGATGACACAGTCCTCTAACAACCCTGCCTCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: AGLGFLRQALADVMS*VRMTQSSNNPASAP
Trigger: GGGCGCTGAGGCAGGGTTGTTAGAGGACTGTGTCATCCTCACCAAGCTCATTACATCTGCCAGGGCCTGCCTCAAGAAGCCCAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCAATGTCTTCAGGCCCTaGAGCAAGGCCCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCINVFRP*SKALVW
Trigger: CCACACCAGGGCCTTGCTTCAGGGCCTGAAGACATT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCTCTCCCGATCTGCTGTaGGAGAATCTGGCACGGGAC +
Preference number: 2 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCISPDLL*ENLARD
Trigger: GTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGA...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACGGTAGAACAGCTTCCTaGGTGCCTGCAGAGACACTG +
Preference number: 2 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHGRTAS*VPAETL
Trigger: CAGTGTCTCTGCAGGCACTCAGGAAGCTGTTCTACC...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGAGCTTCCTGAGTGCCTaGAGAGACACTGTCACCTCT +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQSFLSA*RDTVTS
Trigger: AGAGGTGACAGTGTCTCTGCAGGCACTCAGGAAGCT...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCTGGATGGGATTTCACTaGATCCCAGGAAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAWMGFH*IPGKGW
Trigger: CCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCA...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACAGGAGCAGCAAAGTGTaGCTACCCCAAAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHRSSKV*LPQRLE
Trigger: CTCCAGCCTTTGGGGTAGCCACACTTTGCTGCTCCT...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTTCTGTGAAGGCTGGCTaGAGTCCAGGAGCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: ASSSARSSSHVVKAVCASSVKAG*SPGAAK
Trigger: CTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGA...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTT +
Preference number: 2 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHRLALP*YSRRIV
Trigger: AACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGACCGAGTCACCAAGATaGCCACAGCAGGACCCTTCA +
Preference number: 2 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWTESPR*PQQDPS
Trigger: TGAAGGGTCCTGCTGTGGTCATCTTGGTGACTCGGT...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCAC +
Preference number: 2 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHSCLPI*CERIWH
Trigger: GTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGA...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAACACTGTCACCTCTGTaGCCACAACACCAAACAACC +
Preference number: 2 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGTLSPL*PQHQTT
Trigger: GGTTGTTTGGTGTTGTGGGCACAGAGGTGACAGTGT...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGTGGATGGGATTTCACTaGATCCCAGGAAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQWMGFH*IPGKGW
Trigger: CCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCA...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPQATCL*PTQEQR
Trigger: CCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCCCCACCAAGCGACCTaGCTGTGCCCCACCCAAGAG +
Preference number: 2 (lower is better)
Translates to: TECERWLRVCGPEDRADEPHQAT*LCPTQE
Trigger: CTCTTGGGTGGGGCACAGGCAGGTCGCTTGGTGGGG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGCTTCTGGCTCACCTTTaGCATGTGCTGCTACAGTAC +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQLLAHL*HVLLQY
Trigger: GTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAG...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASARIRG*HHPSLQ
Trigger: CTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCCTGAAGCAAGGCCCTaGTGTGGTACAGAAACTGTC +
Preference number: 2 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHPEARP*CGTETV
Trigger: GACAGTTTCTGTACCACACCAGGGCCTTGCTTCAGG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGTCTGTGAAGGCTGGCTaGAGTCCAGGAGCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWSVKAG*SPGAAK
Trigger: CTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGA...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGTGCCCAGCACTGTGTaGCCCCCACCAAGCGACCTG +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASVPSTV*PPPSDL
Trigger: CAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCAC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGACGGGACGTCCTCTGTaGAGGCTGGCTGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRTGRPL*RLAGVQ
Trigger: CTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGAAAGGACATGAGCCCTaGGCAGGAACTCACATTCAT +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQKGHEP*AGTHIH
Trigger: ATGAATGTGAGTTCCTGCTCAGGGCTCATGTCCTTT...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADARIRG*HHPSLQ
Trigger: CTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGC...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCATCCCCCGCTTCCCTaGGAGCTTTCTCATTCTTTC +
Preference number: 2 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIHPPLP*ELSHSF
Trigger: GAAAGAATGAGAAAGCTCCCAGGGAAGCGGGGGATG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCCAGCAGTCACGTCGTaGAGGCAGTGTGTGCCTCTC +
Preference number: 2 (lower is better)
Translates to: TECERWLRVCGPEDRADEPAVTS*RQCVPL
Trigger: GAGAGGCACACACTGCCTTCACGACGTGACTGCTGG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGT +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASERGWW*TAPQRR
Trigger: ACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCACACTGTCACCTCTGTaGCCACAACACCAAACAACC +
Preference number: 2 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCITLSPL*PQHQTT
Trigger: GGTTGTTTGGTGTTGTGGGCACAGAGGTGACAGTGT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASQATCL*PTQEQR
Trigger: CCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTG...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGAGGAGCAGCAAAGTGTaGCTACCCCAAAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGRSSKV*LPQRLE
Trigger: CTCCAGCCTTTGGGGTAGCCACACTTTGCTGCTCCT...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTT +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPRLALP*YSRRIV
Trigger: AACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGTTTATGAGCTCATACTaGCTCCCCAGCCATCGAAAA +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQFMSSY*LPSHRK
Trigger: TTTTCGATGGCTGGGGAGCCAGTATGAGCTCATAAA...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGTACAAATGTCCCACCTaGCCATCGGTGTGCCTTGAA +
Preference number: 2 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWYKCPT*PSVCLE
Trigger: TTCAAGGCACACCGATGGCCAGGTGGGACATTTGTA...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCAGAATACCAACGACATaGGGGAAAATGAATGTCTTC +
Preference number: 2 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPARIPTT*GKMNVF
Trigger: GAAGACATTCATTTTCCCTCATGTCGTTGGTATTCT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAAGAACACAAAACAAGTaGGATAATTGGTTGGACGGC +
Preference number: 2 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGRTQNK*DNWLDG
Trigger: GCCGTCCAACCAATTATCTCACTTGTTTTGTGTTCT...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGAGAACACAAAACAAGTaGGATAATTGGTTGGACGGC +
Preference number: 2 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQRTQNK*DNWLDG
Trigger: GCCGTCCAACCAATTATCTCACTTGTTTTGTGTTCT...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGTCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCAC +
Preference number: 2 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGSCLPI*CERIWH
Trigger: GTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGA...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTTCGAGACGGATAGTTaGATGGAGTTCCAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHFETDS*MEFQGR
Trigger: TCTACCTTGGAACTCCATGCAACTATCCGTCTCGAA...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCATCTTGGCCAGTAGCTaGTGTGACCGAGTCACCAAG +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPILASS*CDRVTK
Trigger: CTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGAT...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCCAGGTGGGAATGTCTaGCCTTGCTTCAGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPPGGNV*PCFRVL
Trigger: AAGCACTCTGAAGCAAGGGCAGACATTCCCACCTGG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGTCCTCTGTGAAGGCTaGCTGGAGTCCAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADVLCEG*LESRSS
Trigger: GCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGAC...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCAGTGAGATAATTGGTTaGACGGCATCAGTCCGCCTT +
Preference number: 2 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCISEIIG*TASVRL
Trigger: AAGGCGGACTGATGCCGTCCAACCAATTATCTCACT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGAGTGAGATAATTGGTTaGACGGCATCAGTCCGCCTT +
Preference number: 2 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWSEIIG*TASVRL
Trigger: AAGGCGGACTGATGCCGTCCAACCAATTATCTCACT...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAAGAATACCAACGACATaGGGGAAAATGAATGTCTTC +
Preference number: 2 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGRIPTT*GKMNVF
Trigger: GAAGACATTCATTTTCCCTCATGTCGTTGGTATTCT...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATTCTCCCGATCTGCTGTaGGAGAATCTGGCACGGGAC +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADSPDLL*ENLARD
Trigger: GTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGA...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGGTAGAACAGCTTCCTaGGTGCCTGCAGAGACACTG +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASGRTAS*VPAETL
Trigger: CAGTGTCTCTGCAGGCACTCAGGAAGCTGTTCTACC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGGGTAGAACAGCTTCCTaGGTGCCTGCAGAGACACTG +
Preference number: 2 (lower is better)
Translates to: TECERWLRVCGPEDRADEGRTAS*VPAETL
Trigger: CAGTGTCTCTGCAGGCACTCAGGAAGCTGTTCTACC...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGT +
Preference number: 2 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVERGWW*TAPQRR
Trigger: ACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGAGAAAATGGCAAACATaGCCCAAGGAAGGTGTTACC +
Preference number: 2 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWRKWQT*PKEGVT
Trigger: GGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCT...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCAGAAAATGGCAAACATaGCCCAAGGAAGGTGTTACC +
Preference number: 2 (lower is better)
Translates to: APTGLAVMKPPSCETGRGRKWQT*PKEGVT
Trigger: GGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCT...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCACTGTAAAAGGACATaGGCCCTGAGCAGGAACTCA +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPHCKRT*ALSRNS
Trigger: TGAGTTCCTGCTCAGGGCTCATGTCCTTTTACAGTG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCGGGAATGTCTGCCCTTaGTTCAGAGTGCTTGTAGGT +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPGNVCP*FRVLVG
Trigger: ACCTACAAGCACTCTGAAGCAAGGGCAGACATTCCC...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: SFVELNSYMSTSCLPICCARIRG*HHPSLQ
Trigger: CTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGC...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGAGGAGCAGCAAAGTGTaGCTACCCCAAAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQRSSKV*LPQRLE
Trigger: CTCCAGCCTTTGGGGTAGCCACACTTTGCTGCTCCT...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCAGACGGATAGTTGCATaGAGTTCCAAGGTAGAACAG +
Preference number: 2 (lower is better)
Translates to: APTGLAVMKPPSCETGRGRRIVA*SSKVEQ
Trigger: CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCT...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCACTGAGTGTGAACGCTaGTTAAGAGTGTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPTECER*LRVCGP
Trigger: TGGCCCACACACTCTTAACCAGCGTTCACACTCAGT...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTCTCCCGATCTGCTGTaGGAGAATCTGGCACGGGAC +
Preference number: 2 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVSPDLL*ENLARD
Trigger: GTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGGCCATCGGTGTGCCTTaGAAGTGGCATGAAGTTGTC +
Preference number: 2 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRAIGVP*KWHEVV
Trigger: GACAACTTCATGCCACTTTCAAGGCACACCGATGGC...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGTCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TECERWLRVCGPEDRADESCLPI*CERIWH
Trigger: GTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGA...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGAACAGCTTCCTGAGTaGCTGCAGAGACACTGTCAC +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASEQLPE*LQRHCH
Trigger: GTGACAGTGTCTCTGCAGGCACTCAGGAAGCTGTTC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAACGTGAAGGCAGTGTGTaGCTCTCGGCCGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEREGSV*LSAGTG
Trigger: TCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACG...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATTCTGTGAAGGCTGGCTaGAGTCCAGGAGCAGCAAAG +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADSVKAG*SPGAAK
Trigger: CTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGA...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATTGCTGTGAGAGAATCTaGCACGGGACGTCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADCCERI*HGTSSV
Trigger: CACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCA...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCTTCAGATGTTATCTTTaGGCCACCCGGCACTATTTT +
Preference number: 2 (lower is better)
Translates to: APTGLAVMKPPSCETGRGFRCYL*ATRHYF
Trigger: AAAATAGTGCCGGGTGGCCCAAAGATAACATCTGAA...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCATCGAGTTCATGGATaGGATTTCACTGCATCCCAG +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPHRVHG*DFTASQ
Trigger: CTGGGATGCAGTGAAATCCCATCCATGAACTCGATG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGAGGACCCTTCACATGTaGCCTCAAGCTCGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVRTLHM*PQARPG
Trigger: ACCTGGCCGAGCTTGAGGCCACATGTGAAGGGTCCT...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CAA 90 bp CTTCAAAGTGGCATATCTTTGAGGCAGCCTTTTGGTCTAATCTGCTaGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTTTGAGA +
Preference number: 2 (lower is better)
Translates to: LQSGISLRQPFGLIC*SEKLGLRGPTLPLR
Trigger: TCTCAAAGGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATCCTGAAGCAAGGCCCTaGTGTGGTACAGAAACTGTC +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADPEARP*CGTETV
Trigger: GACAGTTTCTGTACCACACCAGGGCCTTGCTTCAGG...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGGGCCCATCGAGTTCATaGATGGGATTTCACTGCATC +
Preference number: 2 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRGPSSS*MGFHCI
Trigger: GATGCAGTGAAATCCCATCCATGAACTCGATGGGCC...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAAATGTCTTCAGGCCCTaGAGCAAGGCCCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: KQFVLSSRERSNWPSSDENVFRP*SKALVW
Trigger: CCACACCAGGGCCTTGCTTCAGGGCCTGAAGACATT...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCGACATGAGGGAAAATaGATGTCTTCAGGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: TECERWLRVCGPEDRADERHEGK*MSSGPE
Trigger: TTCAGGGCCTGAAGACATTCATTTTCCCTCATGTCG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCCGACATGAGGGAAAATaGATGTCTTCAGGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASRHEGK*MSSGPE
Trigger: TTCAGGGCCTGAAGACATTCATTTTCCCTCATGTCG...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGTTAAAACACTTCCTTaGCCCTGGAGAACGAGGATG +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASVKTLP*PWRTRM
Trigger: CATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAAC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGTTTCCAAGGCTGTTGTaGGGGCAGCATCTCTTGTAT +
Preference number: 2 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRFPRLL*GQHLLY
Trigger: ATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAA...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGATCTTGGCCAGTAGCTaGTGTGACCGAGTCACCAAG +
Preference number: 2 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVILASS*CDRVTK
Trigger: CTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGAT...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCATCGAGTTCATGGATaGGATTTCACTGCATCCCAG +
Preference number: 2 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRHRVHG*DFTASQ
Trigger: CTGGGATGCAGTGAAATCCCATCCATGAACTCGATG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACAT +
Preference number: 2 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGEALWS*IPICQH
Trigger: ATGTTGACATATAGGAATTCAGCTCCACAAAGCTTC...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACAT +
Preference number: 2 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPEALWS*IPICQH
Trigger: ATGTTGACATATAGGAATTCAGCTCCACAAAGCTTC...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGTTAAAACACTTCCTTaGCCCTGGAGAACGAGGATG +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADVKTLP*PWRTRM
Trigger: CATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAAC...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAAAGCAGCACCAGTGCTaGAGCCCAACTGTAGACGGA +
Preference number: 2 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEKQHQC*SPTVDG
Trigger: TCCGTCTACAGTTGGGCTTCAGCACTGGTGCTGCTT...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCAGAAAATGGCAAACATaGCCCAAGGAAGGTGTTACC +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASRKWQT*PKEGVT
Trigger: GGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCT...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTTGACAGGTACCAGGTaGGAATGTCTGCCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVLTGTR*ECLPLL
Trigger: AAGCAAGGGCAGACATTCCCACCTGGTACCTGTCAA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CAA 90 bp AAGAAAATGGCAAACATGACCCAAGGAAGGTGTTACCAGCTGGGTTaGACATCATCACTCATGTACAAACACTCGGGCCTCCAGGCCATG +
Preference number: 2 (lower is better)
Translates to: KKMANMTQGRCYQLG*TSSLMYKHSGLQAM
Trigger: CATGGCCTGGAGGCCCGAGTGTTTGTACATGAGTGATGATGTCAAACCCAGCTGGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGAACAGCTTCCTGAGTaGCTGCAGAGACACTGTCAC +
Preference number: 2 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEEQLPE*LQRHCH
Trigger: GTGACAGTGTCTCTGCAGGCACTCAGGAAGCTGTTC...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCAGTCCGCCTTGCCCTaGCCTGGTATTCGAGACGGA +
Preference number: 2 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPQSALP*PGIRDG
Trigger: TCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCAGAATACCAACGACATaGGGGAAAATGAATGTCTTC +
Preference number: 2 (lower is better)
Translates to: FVLSSRERSNWPSSDEASRIPTT*GKMNVF
Trigger: GAAGACATTCATTTTCCCTCATGTCGTTGGTATTCT...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGACGGGACGTCCTCTGTaGAGGCTGGCTGGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: FFYVNASLRFPSKWHIFETGRPL*RLAGVQ
Trigger: CTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGT...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACAT +
Preference number: 2 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQEALWS*IPICQH
Trigger: ATGTTGACATATAGGAATTCAGCTCCACAAAGCTTC...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATAATAAACCAACCTTTTaGACTGTAAGGTGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: YTECERWLRVCGPEDRADNKPTF*TVRCVA
Trigger: CGCCACACACCTTACAGTTCAAAAGGTTGGTTTATT...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTTCGAGACGGATAGTTaGATGGAGTTCCAAGGTAGA +
Preference number: 2 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVFETDS*MEFQGR
Trigger: TCTACCTTGGAACTCCATGCAACTATCCGTCTCGAA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCLEGQL*SGLKLC
Trigger: ACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAG...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGGCTTGTCAGAGAAGCTaGGTCTCCGAGGGCCCACCC +
Preference number: 2 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEACQRS*VSEGPP
Trigger: GGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGC...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTTGCTGTGAGAGAATCTaGCACGGGACGTCCTCTGTG +
Preference number: 2 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPCCERI*HGTSSV
Trigger: CACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCA...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGCCAAGAGCAAAGGCCTaGCTCCAGCAGTGTCATCCC +
Preference number: 2 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEPRAKA*LQQCHP
Trigger: GGGATGACACTGCTGGAGTCAGGCCTTTGCTCTTGG...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGTTACCAGCTGGGTTTaGCATCATCACTCATGTACA +
Preference number: 2 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEVTSWV*HHHSCT
Trigger: TGTACATGAGTGATGATGTCAAACCCAGCTGGTAAC...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAAGACGGATAGTTGCATaGAGTTCCAAGGTAGAACAG +
Preference number: 2 (lower is better)
Translates to: KQFVLSSRERSNWPSSDERRIVA*SSKVEQ
Trigger: CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCT...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTGGCCCATCGAGTTCATaGATGGGATTTCACTGCATC +
Preference number: 2 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPGPSSS*MGFHCI
Trigger: GATGCAGTGAAATCCCATCCATGAACTCGATGGGCC...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGAGCTGTGGTCAGGCCTaGAGCTTTGTGGAGCTGAAT +
Preference number: 2 (lower is better)
Translates to: FFYVNASLRFPSKWHIFESCGQA*SFVELN
Trigger: ATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCT...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR GCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGAGCTTCCTGAGTGCCTaGAGAGACACTGTCACCTCT +
Preference number: 2 (lower is better)
Translates to: FFYVNASLRFPSKWHIFESFLSA*RDTVTS
Trigger: AGAGGTGACAGTGTCTCTGCAGGCACTCAGGAAGCT...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTTTCAGATGTTATCTTTaGGCCACCCGGCACTATTTT +
Preference number: 2 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCFRCYL*ATRHYF
Trigger: AAAATAGTGCCGGGTGGCCCAAAGATAACATCTGAA...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR TCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTAATAAACCAACCTTTTaGACTGTAAGGTGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPNKPTF*TVRCVA
Trigger: CGCCACACACCTTACAGTTCAAAAGGTTGGTTTATT...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp TGGCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTaGAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: WPQARPGPAVTS*RQCVPLGRHRR
Trigger: CCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGCCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp GGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTaGCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTT +
Preference number: 3 (lower is better)
Translates to: GQVQQSRREGSV*LSAGTGGAHRV
Trigger: AACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp CCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGGCCTGACTCCAGCAGT +
Preference number: 3 (lower is better)
Translates to: PALCGPHQATCL*PTQEQRPDSSS
Trigger: ACTGCTGGAGTCAGGCCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGCGGCATCAGTCCGCCTaGCCCTGCCCTGGTATTCGA +
Preference number: 3 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQRHQSA*PCPGIR
Trigger: TCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCG...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCGGCATCAGTCCGCCTaGCCCTGCCCTGGTATTCGA +
Preference number: 3 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIRHQSA*PCPGIR
Trigger: TCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp TGTGAAGGCTGGCTGGAGTCCAGGAGCAGCAAAGTGTaGCTACCCCAAAGGCTGGAGGCAGAGAAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: CEGWLESRSSKV*LPQRLEAEKPG
Trigger: GCCTGGCTTCTCTGCCTCCAGCCTTTGGGGTAGCCACACTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp TCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATaGGATTTCACTGCATCCCAGGAAAAGGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: SAGTGGAHRVHG*DFTASQEKAGL
Trigger: CAGCCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp CCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATaGATGGGATTTCACTGCATCCCAGGAAAAGGCTGG +
Preference number: 3 (lower is better)
Translates to: PLGRHRRGPSSS*MGFHCIPGKGW
Trigger: CCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGTGGGAATGTCTGCCCTaGCTTCAGAGTGCTTGTAGG +
Preference number: 3 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQWECLP*LQSACR
Trigger: CCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCA...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp CGAGGGCCCACCCTCCCTTTGAGAGAGTCAGTGGCGTaGATATTGGCTCCCACCAGCCGAAGCAACTGGACA +
Preference number: 3 (lower is better)
Translates to: RGPTLPLRESVA*ILAPTSRSNWT
Trigger: TGTCCAGTTGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTGACTCTCTCAAAGGGAGGGTGGGCCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp CAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTTTaGGAGAGTCAGTGGCGTGAATATTGGCTCCCACCA +
Preference number: 3 (lower is better)
Translates to: QRSWVSEGPPSL*ESQWREYWLPP
Trigger: TGGTGGGAGCCAATATTCACGCCACTGACTCTCTCAAAGGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp AGTCACCAAGATGACCACAGCAGGACCCTTCACATGTaGCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCG +
Preference number: 3 (lower is better)
Translates to: SHQDDHSRTLHM*PQARPGPAVTS
Trigger: CGACGTGACTGCTGGACCTGGCCGAGCTTGAGGCCACATGTGAAGGGTCCTGCTGTGGTCATCTTGGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGAGGCATCCTAGGACTTaGACAGGTACCAGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWRHPRT*TGTRWE
Trigger: TTCCCACCTGGTACCTGTCAAAGTCCTAGGATGCCT...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp TCTGCTGTGAGAGAATCTGGCACGGGACGTCCTCTGTaGAGGCTGGCTGGAGTCCAGGAGCAGCAAAGTGTG +
Preference number: 3 (lower is better)
Translates to: SAVRESGTGRPL*RLAGVQEQQSV
Trigger: CACACTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp AACGAGGATGGTGGTGAACAGCCCCTCAGCGACGTCTaGTCTTGGCCAGTAGCTGCTGTGACCGAGTCACCA +
Preference number: 3 (lower is better)
Translates to: NEDGGEQPLSDV*SWPVAAVTESP
Trigger: TGGTGACTCGGTCACAGCAGCTACTGGCCAAGATCAGACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp ACAGCCCCTCAGCGACGTCTGATCTTGGCCAGTAGCTaGTGTGACCGAGTCACCAAGATGACCACAGCAGGA +
Preference number: 3 (lower is better)
Translates to: TAPQRRLILASS*CDRVTKMTTAG
Trigger: TCCTGCTGTGGTCATCTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGATCAGACGTCGCTGAGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGTGTTACCAGCTGGGTTaGACATCATCACTCATGTAC +
Preference number: 3 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQCYQLG*TSSLMY
Trigger: GTACATGAGTGATGATGTCAAACCCAGCTGGTAACA...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGGAAAGTGGCATGAAGTaGTCCACTGAACAGGAAGCG +
Preference number: 3 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWESGMK*STEQEA
Trigger: CGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTC...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp TCTTGGCCAGTAGCTGCTGTGACCGAGTCACCAAGATaGCCACAGCAGGACCCTTCACATGTGGCCTCAAGC +
Preference number: 3 (lower is better)
Translates to: SWPVAAVTESPR*PQQDPSHVASS
Trigger: GCTTGAGGCCACATGTGAAGGGTCCTGCTGTGGTCATCTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp CAGCATCCAGGCTGCTTCTGGCTCACCTTTGCCATGTaGTGCTACAGTACAAATGTCCCACCTGGCCATCGG +
Preference number: 3 (lower is better)
Translates to: QHPGCFWLTFAM*CYSTNVPPGHR
Trigger: CCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp TCGGGCCTCCAGGCCATGTACACTGAGTGTGAACGCTaGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGAT +
Preference number: 3 (lower is better)
Translates to: SGLQAMYTECER*LRVCGPEDRAD
Trigger: ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTACATGGCCTGGAGGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGCTTCAGATGTTATCTTaGGGCCACCCGGCACTATTT +
Preference number: 3 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWLQMLS*GHPALF
Trigger: AAATAGTGCCGGGTGGCCCAAAGATAACATCTGAAG...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp AAACACTTCCTTGACCCTGGAGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGTCTGATCTTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: KHFLDPGERGWW*TAPQRRLILAS
Trigger: ACTGGCCAAGATCAGACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTCTCCAGGGTCAAGGAAGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp CATCCAGGCTGCTTCTGGCTCACCTTTGCCATGTGCTaGTACAGTACAAATGTCCCACCTGGCCATCGGTGT +
Preference number: 3 (lower is better)
Translates to: HPGCFWLTFAMC*YSTNVPPGHRC
Trigger: ACACCGATGGCCAGGTGGGACATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp ATTGGTTGGACGGCATCAGTCCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTTGCATGGAGTTCCAAG +
Preference number: 3 (lower is better)
Translates to: IGWTASVRLALP*YSRRIVAWSSK
Trigger: CTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCGTCCAACCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp AGCCCCATCATTTGCACAAAACTCAGCCCTGTGGTGTaGATGTTTGTGTTCGCGGTGGTCCAGGGAAGCCAC +
Preference number: 3 (lower is better)
Translates to: SPIICTKLSPVV*MFVFAVVQGSH
Trigger: GTGGCTTCCCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAATGATGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp AGTGGCATATCTTTGAGGCAGCCTTTTGGTCTAATCTaGTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACC +
Preference number: 3 (lower is better)
Translates to: SGISLRQPFGLI*LSEKLGLRGPT
Trigger: GGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAAGATATGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp GTGCCCACAACACCAAACAACCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGTGGAGCTGAATTCCTA +
Preference number: 3 (lower is better)
Translates to: VPTTPNNLEGQL*SGLKLCGAEFL
Trigger: TAGGAATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAGGTTGTTTGGTGTTGTGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp CTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATaGAGTTCCAAGGTAGAACAGCTTCCTGAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: LALPWYSRRIVA*SSKVEQLPECL
Trigger: CAGGCACTCAGGAAGCTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp GATCCCAGGCATCCTAGGACTTTGACAGGTACCAGGTaGGAATGTCTGCCCTTGCTTCAGAGTGCTTGTAGG +
Preference number: 3 (lower is better)
Translates to: DPRHPRTLTGTR*ECLPLLQSACR
Trigger: CCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCACCTGGTACCTGTCAAAGTCCTAGGATGCCTGGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp AAAGGCCTCCGGATCAGCCAGCATCCAGGCTGCTTCTaGCTCACCTTTGCCATGTGCTGCTACAGTACAAAT +
Preference number: 3 (lower is better)
Translates to: KGLRISQHPGCF*LTFAMCCYSTN
Trigger: ATTTGTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCTGATCCGGAGGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAACGGCATCAGTCCGCCTaGCCCTGCCCTGGTATTCGA +
Preference number: 3 (lower is better)
Translates to: KQFVLSSRERSNWPSSDERHQSA*PCPGIR
Trigger: TCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCG...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGGCTTCTGGCTCACCTTaGCCATGTGCTGCTACAGTA +
Preference number: 3 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRASGSP*PCAATV
Trigger: TACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGC...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp GCAGCTCCCTCAGAATACCAACGACATGAGGGAAAATaGATGTCTTCAGGCCCTGAAGCAAGGCCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: AAPSEYQRHEGK*MSSGPEARPWC
Trigger: ACACCAGGGCCTTGCTTCAGGGCCTGAAGACATTCATTTTCCCTCATGTCGTTGGTATTCTGAGGGAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp TTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTaGGAGAATCTGGCACGGGACGTCCTCTGTGAAGGC +
Preference number: 3 (lower is better)
Translates to: FLYVNILSPDLL*ENLARDVLCEG
Trigger: GCCTTCACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGATGTTGACATATAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp TTACCGTATTATAGGAAAAAGGAGACTCATCACCACTaGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCA +
Preference number: 3 (lower is better)
Translates to: LPYYRKKETHHH*LKVPSTVWPPP
Trigger: TGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGATGAGTCTCCTTTTTCCTATAATACGGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGGCAGATGTAATGAGCTaGGTGAGGATGACACAGTCC +
Preference number: 3 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRADVMS*VRMTQS
Trigger: GGACTGTGTCATCCTCACCAAGCTCATTACATCTGC...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCTTCAGATGTTATCTTaGGGCCACCCGGCACTATTT +
Preference number: 3 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRLQMLS*GHPALF
Trigger: AAATAGTGCCGGGTGGCCCAAAGATAACATCTGAAG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTGGGAATGTCTGCCCTaGCTTCAGAGTGCTTGTAGG +
Preference number: 3 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVWECLP*LQSACR
Trigger: CCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGTCTGAAAATTGCTGTTaGGTTTATGAGCTCATACTG +
Preference number: 3 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWSENCC*VYELIL
Trigger: CAGTATGAGCTCATAAACCAAACAGCAATTTTCAGA...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp GTCCCACCTGGCCATCGGTGTGCCTTGAAAGTGGCATaGAGTTGTCCACTGAACAGGAAGCGTCTTCTTTTA +
Preference number: 3 (lower is better)
Translates to: VPPGHRCALKVA*SCPLNRKRLLL
Trigger: TAAAAGAAGACGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTCAAGGCACACCGATGGCCAGGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp CTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCACGGGACGTCCTCTGTG +
Preference number: 3 (lower is better)
Translates to: LNSYMSTSCLPI*CERIWHGTSSV
Trigger: CACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR GCA 72 bp CTGCTACAGTACAAATGTCCCACCTGGCCATCGGTGTaGCTTGAAAGTGGCATGAAGTTGTCCACTGAACAG +
Preference number: 3 (lower is better)
Translates to: LLQYKCPTWPSV*LESGMKLSTEQ
Trigger: CTGTTCAGTGGACAACTTCATGCCACTTTCAAGGCACACCGATGGCCAGGTGGGACATTTGTACTGTAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGCAGATGTAATGAGCTaGGTGAGGATGACACAGTCC +
Preference number: 3 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVADVMS*VRMTQS
Trigger: GGACTGTGTCATCCTCACCAAGCTCATTACATCTGC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp GTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTaGCCCTGGAGAACGAGGATGGTGGTGAACAGCCCC +
Preference number: 3 (lower is better)
Translates to: VKSKTRHVKTLP*PWRTRMVVNSP
Trigger: GGGGCTGTTCACCACCATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp GGCAGCATCTCTTGTATTTGGTCCCACGTGCTAGACTaGAAGATGGAAGATCCCAGGCATCCTAGGACTTTG +
Preference number: 3 (lower is better)
Translates to: GSISCIWSHVLD*KMEDPRHPRTL
Trigger: CAAAGTCCTAGGATGCCTGGGATCTTCCATCTTTCAGTCTAGCACGTGGGACCAAATACAAGAGATGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp AGGATGACAGAACACAAAACAAGTGAGATAATTGGTTaGACGGCATCAGTCCGCCTTGCCCTGCCCTGGTAT +
Preference number: 3 (lower is better)
Translates to: RMTEHKTSEIIG*TASVRLALPWY
Trigger: ATACCAGGGCAGGGCAAGGCGGACTGATGCCGTCCAACCAATTATCTCACTTGTTTTGTGTTCTGTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp CAGCCATCGAAAACAGGAAACTATTCATCTCTCGAGTaGATAGGCAGCGTGGACAATGCCTCGCTTACTGAA +
Preference number: 3 (lower is better)
Translates to: QPSKTGNYSSLE*IGSVDNASLTE
Trigger: TTCAGTAAGCGAGGCATTGTCCACGCTGCCTATTCACTCGAGAGATGAATAGTTTCCTGTTTTCGATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp GAATATTGGCTCCCACCAGCCGAAGCAACTGGACACTaGGTTTATTCTGAAGATCAGGAACAGATGTCTCTG +
Preference number: 3 (lower is better)
Translates to: EYWLPPAEATGH*VYSEDQEQMSL
Trigger: CAGAGACATCTGTTCCTGATCTTCAGAATAAACTCAGTGTCCAGTTGCTTCGGCTGGTGGGAGCCAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR TCA 72 bp GGAGGGGCGTTATATAGAATTCACTGTAAAAGGACATaGGCCCTGAGCAGGAACTCACATTCATTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: GGALYRIHCKRT*ALSRNSHSFQE
Trigger: TTCTTGGAATGAATGTGAGTTCCTGCTCAGGGCTCATGTCCTTTTACAGTGAATTCTATATAACGCCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CCA 72 bp TTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTaGCATATCTTTGAGGCAGCCTTTTGGTCTAATCTG +
Preference number: 3 (lower is better)
Translates to: FYVNASLRFPSK*HIFEAAFWSNL
Trigger: CAGATTAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR-3UTR CAA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGTCTGAAAATTGCTGTTaGGTTTATGAGCTCATACTG +
Preference number: 3 (lower is better)
Translates to: FFYVNASLRFPSKWHIFESENCC*VYELIL
Trigger: CAGTATGAGCTCATAAACCAAACAGCAATTTTCAGA...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCGTGCCCAGCACTGTGTaGCCCCCACCAAGCGACCTG +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAVPSTV*PPPSDL
Trigger: CAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCAC...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCGGGCGGCCGCCGCCATaGCAGTCGCTGCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIGRPPP*QSLPKQ
Trigger: TTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCC...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCACTCTTGGCTGGACTTaGGATCCCGCCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPATLGWT*DPAQAP
Trigger: GGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCCCAGCAGTCACGTCGTaGAGGCAGTGTGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIPAVTS*RQCVPL
Trigger: GAGAGGCACACACTGCCTTCACGACGTGACTGCTGG...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCCCCCTCAGCGACGTCTaGTCTTGGCCAGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAPLSDV*SWPVAA
Trigger: AGCAGCTACTGGCCAAGATCAGACGTCGCTGAGGGG...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGT +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAERGWW*TAPQRR
Trigger: ACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTC...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTCCCCACCAAGCGACCTaGCTGTGCCCCACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASPHQAT*LCPTQE
Trigger: CTCTTGGGTGGGGCACAGGCAGGTCGCTTGGTGGGG...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHARIRG*HHPSLQ
Trigger: CTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGC...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGTGCGGGGAGGTGGGCTaGAGCCCTCTCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQCGEVG*SPLLAL
Trigger: AAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCGCA...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGACAGTCCGCCTTGCCCTaGCCTGGTATTCGAGACGGA +
Preference number: 4 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGQSALP*PGIRDG
Trigger: TCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTG...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCTCTGCTCCTCACTCTTaGCTGGACTTGGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPISAPHS*LDLGSR
Trigger: GCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGA...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCACGGGACGTCCTCTGTaGAGGCTGGCTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIITGRPL*RLAGVQ
Trigger: CTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGT...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCACCGAGTCACCAAGATaGCCACAGCAGGACCCTTCA +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPATESPR*PQQDPS
Trigger: TGAAGGGTCCTGCTGTGGTCATCTTGGTGACTCGGT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCACCGAGTCACCAAGATaGCCACAGCAGGACCCTTCA +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPITESPR*PQQDPS
Trigger: TGAAGGGTCCTGCTGTGGTCATCTTGGTGACTCGGT...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTCCCCTCAGCGACGTCTaGTCTTGGCCAGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASPLSDV*SWPVAA
Trigger: AGCAGCTACTGGCCAAGATCAGACGTCGCTGAGGGG...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCAAGCAGCACCAGTGCTaGAGCCCAACTGTAGACGGA +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIKQHQC*SPTVDG
Trigger: TCCGTCTACAGTTGGGCTTCAGCACTGGTGCTGCTT...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHQATCL*PTQEQR
Trigger: CCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCACTCTTGGCTGGACTTaGGATCCCGCCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIITLGWT*DPAQAP
Trigger: GGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGT...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGTCTGCTCCTCACTCTTaGCTGGACTTGGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQSAPHS*LDLGSR
Trigger: GCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGA...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGGCTTGTCAGAGAAGCTaGGTCTCCGAGGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWACQRS*VSEGPP
Trigger: GGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGC...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCAGGCCAGCGCAGCCTTaGAAGCGCAGCTTTCCATCG +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGRPAQP*KRSFPS
Trigger: CGATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCT...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCAGCTGTGGTCAGGCCTaGAGCTTTGTGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPISCGQA*SFVELN
Trigger: ATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCT...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCCAGCAGTCACGTCGTaGAGGCAGTGTGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGPAVTS*RQCVPL
Trigger: GAGAGGCACACACTGCCTTCACGACGTGACTGCTGG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGACCGAGTCACCAAGATaGCCACAGCAGGACCCTTCA +
Preference number: 4 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQTESPR*PQQDPS
Trigger: TGAAGGGTCCTGCTGTGGTCATCTTGGTGACTCGGT...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGT +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIERGWW*TAPQRR
Trigger: ACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTC...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGAGGAGCAGGCTGTACTaGAGCGGAGCTTCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWRSRLY*SGASAE
Trigger: TTCCGCCGAAGCTCCGCTGCAGTACAGCCTGCTCCT...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCGAACAGCTTCCTGAGTaGCTGCAGAGACACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAEQLPE*LQRHCH
Trigger: GTGACAGTGTCTCTGCAGGCACTCAGGAAGCTGTTC...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAACAGCTTCCTGAGTaGCTGCAGAGACACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIEQLPE*LQRHCH
Trigger: GTGACAGTGTCTCTGCAGGCACTCAGGAAGCTGTTC...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCAGTCCGCCTTGCCCTaGCCTGGTATTCGAGACGGA +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIQSALP*PGIRDG
Trigger: TCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCATCTTGGCCAGTAGCTaGTGTGACCGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAILASS*CDRVTK
Trigger: CTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGAT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCACCTGGCCATCGGTGTaGCTTGAAAGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPATWPSV*LESGMK
Trigger: CTTCATGCCACTTTCAAGGCACACCGATGGCCAGGT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCTCCTCACTCTTGGCTaGACTTGGGATCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIILLTLG*TWDPAQ
Trigger: CTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGTCCAGGAGCCGGGGCTaGCGCTTGTCACCCACCAGG +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRSRSRG*RLSPTR
Trigger: CCTGGTGGGTGACAAGCGTCAGCCCCGGCTCCTGGA...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTGGTAGAACAGCTTCCTaGGTGCCTGCAGAGACACTG +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASGRTAS*VPAETL
Trigger: CAGTGTCTCTGCAGGCACTCAGGAAGCTGTTCTACC...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCCAAGAGCAAAGGCCTaGCTCCAGCAGTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGPRAKA*LQQCHP
Trigger: GGGATGACACTGCTGGAGTCAGGCCTTTGCTCTTGG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACAGAGAGTCAGTGGCGTaGATATTGGCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHRESVA*ILAPTS
Trigger: GCTGGTGGGAGCCAATATTCACGCCACTGACTCTCT...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGCCTTGAAAGTGGCATaGAGTTGTCCACTGAACAGG +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIALKVA*SCPLNR
Trigger: CCTGTTCAGTGGACAACTTCATGCCACTTTCAAGGC...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCCCCACCAAGCGACCTaGCTGTGCCCCACCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFPHQAT*LCPTQE
Trigger: CTCTTGGGTGGGGCACAGGCAGGTCGCTTGGTGGGG...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGAGCCAGCATCCAGGCTaGTTCTGGCTCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWSQHPG*FWLTFA
Trigger: GGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCT...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCAGCCAGCATCCAGGCTaGTTCTGGCTCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCISQHPG*FWLTFA
Trigger: GGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTCTGTGAAGGCTGGCTaGAGTCCAGGAGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHSVKAG*SPGAAK
Trigger: CTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGA...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCAGGACCCTTCACATGTaGCCTCAAGCTCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGRTLHM*PQARPG
Trigger: ACCTGGCCGAGCTTGAGGCCACATGTGAAGGGTCCT...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCGTGCCCAGCACTGTGTaGCCCCCACCAAGCGACCTG +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFVPSTV*PPPSDL
Trigger: CAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCAC...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTGAGACTCATCACCACTaGCTGAAGGTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASETHHH*LKVPST
Trigger: AGTGCTGGGCACCTTCAGCCAGTGGTGATGAGTCTC...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCGCTTACTGAACCGATaGGTACTGACAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIRLLNR*VLTALA
Trigger: CGCCAGGGCTGTCAGTACCCATCGGTTCAGTAAGCG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGGCTTGTCAGAGAAGCTaGGTCTCCGAGGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGACQRS*VSEGPP
Trigger: GGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGC...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTCATCCAGGCTGCTTCTaGCTCACCTTTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASHPGCF*LTFAMC
Trigger: GCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATG...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCATCCAGGCTGCTTCTaGCTCACCTTTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHHPGCF*LTFAMC
Trigger: GCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACATCCAGGAGCCGGGGCTaGCGCTTGTCACCCACCAGG +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTSRSRG*RLSPTR
Trigger: CCTGGTGGGTGACAAGCGTCAGCCCCGGCTCCTGGA...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGAGGCCAGCGCAGCCTTaGAAGCGCAGCTTTCCATCG +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGRPAQP*KRSFPS
Trigger: CGATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCT...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCACTGTTCTTCCAGTCTaGTGTTCCCCGGTAAGATTC +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPITVLPV*CSPVRF
Trigger: GAATCTTACCGGGGAACATCAGACTGGAAGAACAGT...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCCGACATGAGGGAAAATaGATGTCTTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIRHEGK*MSSGPE
Trigger: TTCAGGGCCTGAAGACATTCATTTTCCCTCATGTCG...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCGGTAGAACAGCTTCCTaGGTGCCTGCAGAGACACTG +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGGRTAS*VPAETL
Trigger: CAGTGTCTCTGCAGGCACTCAGGAAGCTGTTCTACC...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCAAGCAGCACCAGTGCTaGAGCCCAACTGTAGACGGA +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIKQHQC*SPTVDG
Trigger: TCCGTCTACAGTTGGGCTTCAGCACTGGTGCTGCTT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACGCCATCGGTGTGCCTTaGAAGTGGCATGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHAIGVP*KWHEVV
Trigger: GACAACTTCATGCCACTTTCAAGGCACACCGATGGC...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGGGCATCAGTCCGCCTTaGCCTGCCCTGGTATTCGAG +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGGISPP*PALVFE
Trigger: CTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCC...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGQATCL*PTQEQR
Trigger: CCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTG...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCCAGGTGGGAATGTCTaGCCTTGCTTCAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHPGGNV*PCFRVL
Trigger: AAGCACTCTGAAGCAAGGGCAGACATTCCCACCTGG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCTCTGTGAAGGCTGGCTaGAGTCCAGGAGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCISVKAG*SPGAAK
Trigger: CTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGA...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCTGCTGTGAGAGAATCTaGCACGGGACGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIICCERI*HGTSSV
Trigger: CACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCA...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTT +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIRLALP*YSRRIV
Trigger: AACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCAGTGAGATAATTGGTTaGACGGCATCAGTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPASEIIG*TASVRL
Trigger: AAGGCGGACTGATGCCGTCCAACCAATTATCTCACT...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCGAGACTCATCACCACTaGCTGAAGGTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIETHHH*LKVPST
Trigger: AGTGCTGGGCACCTTCAGCCAGTGGTGATGAGTCTC...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCAGTGGCGTGAATATTaGCTCCCACCAGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIQWREY*LPPAEA
Trigger: TGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATACAAATGTCCCACCTaGCCATCGGTGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGYKCPT*PSVCLE
Trigger: TTCAAGGCACACCGATGGCCAGGTGGGACATTTGTA...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCTGCGGGGAGGTGGGCTaGAGCCCTCTCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFCGEVG*SPLLAL
Trigger: AAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCGCA...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCTCAGCCCTGTGGTGTaGATGTTTGTGTTCGCGGTG +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGLSPVV*MFVFAV
Trigger: CACCGCGAACACAAACATCCACACCACAGGGCTGAG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCAGCTGTGGTCAGGCCTaGAGCTTTGTGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGSCGQA*SFVELN
Trigger: ATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCT...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAGTTAAAACACTTCCTTaGCCCTGGAGAACGAGGATG +
Preference number: 4 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGVKTLP*PWRTRM
Trigger: CATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAAC...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCTATTCATCTCTCGAGTaGATAGGCAGCGTGGACAAT +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIYSSLE*IGSVDN
Trigger: ATTGTCCACGCTGCCTATTCACTCGAGAGATGAATA...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCCATGAAGTTGTCCACTaGACAGGAAGCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAHEVVH*TGSVFF
Trigger: AAAGAAGACGCTTCCTGTTCAGTGGACAACTTCATG...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCGCCATCGGTGTGCCTTaGAAGTGGCATGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIAIGVP*KWHEVV
Trigger: GACAACTTCATGCCACTTTCAAGGCACACCGATGGC...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCGGCATCATCCTTCCCTaGAGGCAATTACTCTCACCG +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIGIILP*RQLLSP
Trigger: CGGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCC...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGGGCATCATCCTTCCCTaGAGGCAATTACTCTCACCG +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWGIILP*RQLLSP
Trigger: CGGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCC...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCTCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCAC +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIISCLPI*CERIWH
Trigger: GTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGA...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCAGCTTCCTGAGTGCCTaGAGAGACACTGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIISFLSA*RDTVTS
Trigger: AGAGGTGACAGTGTCTCTGCAGGCACTCAGGAAGCT...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCGAACAGCTTCCTGAGTaGCTGCAGAGACACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIEQLPE*LQRHCH
Trigger: GTGACAGTGTCTCTGCAGGCACTCAGGAAGCTGTTC...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCGTGAAGGCAGTGTGTaGCTCTCGGCCGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRREGSV*LSAGTG
Trigger: TCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCATCTTGGCCAGTAGCTaGTGTGACCGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIILASS*CDRVTK
Trigger: CTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGAT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACGGGAATGTCTGCCCTTaGTTCAGAGTGCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHGNVCP*FRVLVG
Trigger: ACCTACAAGCACTCTGAAGCAAGGGCAGACATTCCC...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCCTCACCTTTGCCATGTaGTGCTACAGTACAAATGTC +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPALTFAM*CYSTNV
Trigger: GACATTTGTACTGTAGCAGCACATGGCAAAGGTGAG...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCAACCTCCACAACCAATaGCCCCAGCCTTTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIINLHNQ*PQPLSQ
Trigger: CTGGCTTAAAGGCTGGGGCCATTGGTTGTGGAGGTT...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCATCCCCCGCTTCCCTaGGAGCTTTCTCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIHPPLP*ELSHSF
Trigger: GAAAGAATGAGAAAGCTCCCAGGGAAGCGGGGGATG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTACTGAGTGTGAACGCTaGTTAAGAGTGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASTECER*LRVCGP
Trigger: TGGCCCACACACTCTTAACCAGCGTTCACACTCAGT...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGCTTGTCAGAGAAGCTaGGTCTCCGAGGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASACQRS*VSEGPP
Trigger: GGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTTACAAATGTCCCACCTaGCCATCGGTGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASYKCPT*PSVCLE
Trigger: TTCAAGGCACACCGATGGCCAGGTGGGACATTTGTA...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGCAAAACTCAGCCCTGTaGTGTGGATGTTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQQNSAL*CGCLCS
Trigger: CGAACACAAACATCCACACCACAGGGCTGAGTTTTG...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGCCAGCAGTCACGTCGTaGAGGCAGTGTGTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQPAVTS*RQCVPL
Trigger: GAGAGGCACACACTGCCTTCACGACGTGACTGCTGG...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTTTCCAAGGCTGTTGTaGGGGCAGCATCTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHFPRLL*GQHLLY
Trigger: ATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAA...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCGCCTTGAAAGTGGCATaGAGTTGTCCACTGAACAGG +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGALKVA*SCPLNR
Trigger: CCTGTTCAGTGGACAACTTCATGCCACTTTCAAGGC...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGAGGAGCAGGCTGTACTaGAGCGGAGCTTCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADERSRLY*SGASAE
Trigger: TTCCGCCGAAGCTCCGCTGCAGTACAGCCTGCTCCT...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCGGGAATGTCTGCCCTTaGTTCAGAGTGCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIGNVCP*FRVLVG
Trigger: ACCTACAAGCACTCTGAAGCAAGGGCAGACATTCCC...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCGGGAATGTCTGCCCTTaGTTCAGAGTGCTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGGNVCP*FRVLVG
Trigger: ACCTACAAGCACTCTGAAGCAAGGGCAGACATTCCC...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGACTCACCTTTGCCATGTaGTGCTACAGTACAAATGTC +
Preference number: 4 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGLTFAM*CYSTNV
Trigger: GACATTTGTACTGTAGCAGCACATGGCAAAGGTGAG...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCAGCCAGCATCCAGGCTaGTTCTGGCTCACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFSQHPG*FWLTFA
Trigger: GGCAAAGGTGAGCCAGAAGCAGCCTGGATGCTGGCT...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCTCCTCACTCTTGGCTaGACTTGGGATCCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADELLTLG*TWDPAQ
Trigger: CTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVARIRG*HHPSLQ
Trigger: CTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGTCCTCTGTGAAGGCTaGCTGGAGTCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASVLCEG*LESRSS
Trigger: GCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGAC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTT +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGRLALP*YSRRIV
Trigger: AACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCG...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCATCGAGTTCATGGATaGGATTTCACTGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHHRVHG*DFTASQ
Trigger: CTGGGATGCAGTGAAATCCCATCCATGAACTCGATG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCAGGACCCTTCACATGTaGCCTCAAGCTCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFRTLHM*PQARPG
Trigger: ACCTGGCCGAGCTTGAGGCCACATGTGAAGGGTCCT...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCACTGAGTGTGAACGCTaGTTAAGAGTGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIITECER*LRVCGP
Trigger: TGGCCCACACACTCTTAACCAGCGTTCACACTCAGT...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGAGGGAACGCTCCAACTaGCCTAGCAGTGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGRERSN*PSSDEA
Trigger: GGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCT...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCTTGACAGGTACCAGGTaGGAATGTCTGCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGLTGTR*ECLPLL
Trigger: AAGCAAGGGCAGACATTCCCACCTGGTACCTGTCAA...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCTTTGAGGCAGCCTTTTaGTCTAATCTGCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPAFEAAF*SNLLVR
Trigger: TCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAA...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCAAAACTCAGCCCTGTaGTGTGGATGTTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHQNSAL*CGCLCS
Trigger: CGAACACAAACATCCACACCACAGGGCTGAGTTTTG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAATGTCTTCAGGCCCTaGAGCAAGGCCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRNVFRP*SKALVW
Trigger: CCACACCAGGGCCTTGCTTCAGGGCCTGAAGACATT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACAT +
Preference number: 4 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIEALWS*IPICQH
Trigger: ATGTTGACATATAGGAATTCAGCTCCACAAAGCTTC...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCCAAGAGCAAAGGCCTaGCTCCAGCAGTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADEPRAKA*LQQCHP
Trigger: GGGATGACACTGCTGGAGTCAGGCCTTTGCTCTTGG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTAGAAAATGGCAAACATaGCCCAAGGAAGGTGTTACC +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASRKWQT*PKEGVT
Trigger: GGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCT...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCAAAGGACATGAGCCCTaGGCAGGAACTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGKGHEP*AGTHIH
Trigger: ATGAATGTGAGTTCCTGCTCAGGGCTCATGTCCTTT...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCAAAGGACATGAGCCCTaGGCAGGAACTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIKGHEP*AGTHIH
Trigger: ATGAATGTGAGTTCCTGCTCAGGGCTCATGTCCTTT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTCCCACGTGCTAGACTaGAAGATGGAAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPSHVLD*KMEDPR
Trigger: CCTGGGATCTTCCATCTTTCAGTCTAGCACGTGGGA...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGTTGCTGTTTGGTTTATaGGCTCATACTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWLLFGL*AHTGSP
Trigger: TGGGGAGCCAGTATGAGCTCATAAACCAAACAGCAA...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCATGAAGTTGTCCACTaGACAGGAAGCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHHEVVH*TGSVFF
Trigger: AAAGAAGACGCTTCCTGTTCAGTGGACAACTTCATG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAAGGAGCAGGCTGTACTaGAGCGGAGCTTCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTRSRLY*SGASAE
Trigger: TTCCGCCGAAGCTCCGCTGCAGTACAGCCTGCTCCT...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTCACCCACCAGGTACTaGAGGAGCAGGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASSPTRY*RSRLYC
Trigger: GCAGTACAGCCTGCTCCTGCAGTACCTGGTGGGTGA...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGGCATCAGTCCGCCTTaGCCTGCCCTGGTATTCGAG +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADGISPP*PALVFE
Trigger: CTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCC...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGCAAAGCCCCATCATTTaGACAAAACTCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWQSPII*TKLSPV
Trigger: CACAGGGCTGAGTTTTGTGCAAATGATGGGGCTTTG...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTCTGCTCCTCACTCTTaGCTGGACTTGGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASSAPHS*LDLGSR
Trigger: GCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGA...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCAGGAGCAGCAAAGTGTaGCTACCCCAAAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFRSSKV*LPQRLE
Trigger: CTCCAGCCTTTGGGGTAGCCACACTTTGCTGCTCCT...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTCCTCTGTGAAGGCTaGCTGGAGTCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTVLCEG*LESRSS
Trigger: GCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGAC...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGCATCCCCCGCTTCCCTaGGAGCTTTCTCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGHPPLP*ELSHSF
Trigger: GAAAGAATGAGAAAGCTCCCAGGGAAGCGGGGGATG...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCATCGAGTTCATGGATaGGATTTCACTGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIHRVHG*DFTASQ
Trigger: CTGGGATGCAGTGAAATCCCATCCATGAACTCGATG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCCGCTTACTGAACCGATaGGTACTGACAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASRLLNR*VLTALA
Trigger: CGCCAGGGCTGTCAGTACCCATCGGTTCAGTAAGCG...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTTTTATGAGCTCATACTaGCTCCCCAGCCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASFMSSY*LPSHRK
Trigger: TTTTCGATGGCTGGGGAGCCAGTATGAGCTCATAAA...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCTCAGCCCTGTGGTGTaGATGTTTGTGTTCGCGGTG +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFLSPVV*MFVFAV
Trigger: CACCGCGAACACAAACATCCACACCACAGGGCTGAG...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CAA 72 bp GGCTTCTTGAGGCAGGCCCTGGCAGATGTAATGAGCTaGGTGAGGATGACACAGTCCTCTAACAACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GFLRQALADVMS*VRMTQSSNNPA
Trigger: GGCAGGGTTGTTAGAGGACTGTGTCATCCTCACCAAGCTCATTACATCTGCCAGGGCCTGCCTCAAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CAA 72 bp GGCATATCTTTGAGGCAGCCTTTTGGTCTAATCTGCTaGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GISLRQPFGLIC*SEKLGLRGPTL
Trigger: GAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAAGATATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATAATGTCTTCAGGCCCTaGAGCAAGGCCCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADNVFRP*SKALVW
Trigger: CCACACCAGGGCCTTGCTTCAGGGCCTGAAGACATT...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGCCCCTCAGCGACGTCTaGTCTTGGCCAGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVPLSDV*SWPVAA
Trigger: AGCAGCTACTGGCCAAGATCAGACGTCGCTGAGGGG...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGTATTCATCTCTCGAGTaGATAGGCAGCGTGGACAAT +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWYSSLE*IGSVDN
Trigger: ATTGTCCACGCTGCCTATTCACTCGAGAGATGAATA...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTGAAGCAACTGGACACTaGGTTTATTCTGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASEATGH*VYSEDQ
Trigger: CTGATCTTCAGAATAAACTCAGTGTCCAGTTGCTTC...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCTCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFSCLPI*CERIWH
Trigger: GTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGA...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGACACTGTCACCTCTGTaGCCACAACACCAAACAACC +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGTLSPL*PQHQTT
Trigger: GGTTGTTTGGTGTTGTGGGCACAGAGGTGACAGTGT...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCTTCGAGACGGATAGTTaGATGGAGTTCCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIFETDS*MEFQGR
Trigger: TCTACCTTGGAACTCCATGCAACTATCCGTCTCGAA...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCTTCGAGACGGATAGTTaGATGGAGTTCCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIFETDS*MEFQGR
Trigger: TCTACCTTGGAACTCCATGCAACTATCCGTCTCGAA...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGGCATCAGTCCGCCTTaGCCTGCCCTGGTATTCGAG +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVGISPP*PALVFE
Trigger: CTCGAATACCAGGGCAGGGCAAGGCGGACTGATGCC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCCTTTTGGTCTAATCTaGTTGTCAGAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGPFGLI*LSEKLG
Trigger: ACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCACATGGCTCCCACAATaGCGAAATTTTTGGCATAGG +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIITWLPQ*RNFWHR
Trigger: CCTATGCCAAAAATTTCGCCATTGTGGGAGCCATGT...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTCTGTGAAGGCTGGCTaGAGTCCAGGAGCAGCAAAG +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQSVKAG*SPGAAK
Trigger: CTTTGCTGCTCCTGGACTCCAGCCAGCCTTCACAGA...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCAGACGGATAGTTGCATaGAGTTCCAAGGTAGAACAG +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIRRIVA*SSKVEQ
Trigger: CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCT...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGCGCCTTGCCCTGCCCTaGTATTCGAGACGGATAGTT +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQRLALP*YSRRIV
Trigger: AACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCG...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCGGCCCATCGAGTTCATaGATGGGATTTCACTGCATC +
Preference number: 4 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPGPSSS*MGFHCI
Trigger: GATGCAGTGAAATCCCATCCATGAACTCGATGGGCC...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAGGGAACGCTCCAACTaGCCTAGCAGTGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRRERSN*PSSDEA
Trigger: GGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCTTTATGAGCTCATACTaGCTCCCCAGCCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIFMSSY*LPSHRK
Trigger: TTTTCGATGGCTGGGGAGCCAGTATGAGCTCATAAA...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCAGTGGCGTGAATATTaGCTCCCACCAGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRQWREY*LPPAEA
Trigger: TGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTTTTGAGGCAGCCTTTTaGTCTAATCTGCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASFEAAF*SNLLVR
Trigger: TCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAA...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACAGAATACCAACGACATaGGGGAAAATGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHRIPTT*GKMNVF
Trigger: GAAGACATTCATTTTCCCTCATGTCGTTGGTATTCT...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTAGAATACCAACGACATaGGGGAAAATGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: ASSSARSSSHVVKAVCASRIPTT*GKMNVF
Trigger: GAAGACATTCATTTTCCCTCATGTCGTTGGTATTCT...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTCCCACGTGCTAGACTaGAAGATGGAAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASSHVLD*KMEDPR
Trigger: CCTGGGATCTTCCATCTTTCAGTCTAGCACGTGGGA...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGTTGCTGTTTGGTTTATaGGCTCATACTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGLLFGL*AHTGSP
Trigger: TGGGGAGCCAGTATGAGCTCATAAACCAAACAGCAA...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGAGCTTCCTGAGTGCCTaGAGAGACACTGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADESFLSA*RDTVTS
Trigger: AGAGGTGACAGTGTCTCTGCAGGCACTCAGGAAGCT...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTCGTGAAGGCAGTGTGTaGCTCTCGGCCGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCREGSV*LSAGTG
Trigger: TCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACG...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCCAGGTGGGAATGTCTaGCCTTGCTTCAGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRPGGNV*PCFRVL
Trigger: AAGCACTCTGAAGCAAGGGCAGACATTCCCACCTGG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCACCTGGCCATCGGTGTaGCTTGAAAGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASTWPSV*LESGMK
Trigger: CTTCATGCCACTTTCAAGGCACACCGATGGCCAGGT...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCAGTACAAGAAAACATaGCTCCCACAATGGCGAAAT +
Preference number: 4 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIQYKKT*LPQWRN
Trigger: ATTTCGCCATTGTGGGAGCCATGTTTTCTTGTACTG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAACCTCCACAACCAATaGCCCCAGCCTTTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRNLHNQ*PQPLSQ
Trigger: CTGGCTTAAAGGCTGGGGCCATTGGTTGTGGAGGTT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCCTGAAGCAAGGCCCTaGTGTGGTACAGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRPEARP*CGTETV
Trigger: GACAGTTTCTGTACCACACCAGGGCCTTGCTTCAGG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACATGCTGTGAGAGAATCTaGCACGGGACGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTCCERI*HGTSSV
Trigger: CACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCA...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGCGCTTTCCTTCAAAGTaGCATATCTTTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGRFPSK*HIFEAA
Trigger: GGCTGCCTCAAAGATATGCCACTTTGAAGGAAAGCG...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACACATCCAGGCTGCTTCTaGCTCACCTTTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTHPGCF*LTFAMC
Trigger: GCACATGGCAAAGGTGAGCCAGAAGCAGCCTGGATG...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTGTTTGTGTTCGCGGTaGTCCAGGGAAGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQCLCSR*SREATN
Trigger: ATTGGTGGCTTCCCTGGACCACCGCGAACACAAACA...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTTCCAGGAGCCGGGGCTaGCGCTTGTCACCCACCAGG +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPSRSRG*RLSPTR
Trigger: CCTGGTGGGTGACAAGCGTCAGCCCCGGCTCCTGGA...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACAT +
Preference number: 4 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWEALWS*IPICQH
Trigger: ATGTTGACATATAGGAATTCAGCTCCACAAAGCTTC...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTGAACGAGGATGGTGGTaGACAGCCCCTCAGCGACGT +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCERGWW*TAPQRR
Trigger: ACGTCGCTGAGGGGCTGTTCACCACCATCCTCGTTC...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCGTTAAAACACTTCCTTaGCCCTGGAGAACGAGGATG +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFVKTLP*PWRTRM
Trigger: CATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAAC...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCACTGTAAAAGGACATaGGCCCTGAGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADEHCKRT*ALSRNS
Trigger: TGAGTTCCTGCTCAGGGCTCATGTCCTTTTACAGTG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGCCTTGAAAGTGGCATaGAGTTGTCCACTGAACAGG +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASALKVA*SCPLNR
Trigger: CCTGTTCAGTGGACAACTTCATGCCACTTTCAAGGC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATAGCTTCCTGAGTGCCTaGAGAGACACTGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADSFLSA*RDTVTS
Trigger: AGAGGTGACAGTGTCTCTGCAGGCACTCAGGAAGCT...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAACCTGGCCATCGGTGTaGCTTGAAAGTGGCATGAAG +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTTWPSV*LESGMK
Trigger: CTTCATGCCACTTTCAAGGCACACCGATGGCCAGGT...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCAATGGCGAAATTTTTaGCATAGGACATTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGQWRNF*HRTFLS
Trigger: AGAGAGGAATGTCCTATGCCAAAAATTTCGCCATTG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCACATGGCTCCCACAATaGCGAAATTTTTGGCATAGG +
Preference number: 4 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPTWLPQ*RNFWHR
Trigger: CCTATGCCAAAAATTTCGCCATTGTGGGAGCCATGT...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAAACCTCCACAACCAATaGCCCCAGCCTTTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTNLHNQ*PQPLSQ
Trigger: CTGGCTTAAAGGCTGGGGCCATTGGTTGTGGAGGTT...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACACCTGAAGCAAGGCCCTaGTGTGGTACAGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTPEARP*CGTETV
Trigger: GACAGTTTCTGTACCACACCAGGGCCTTGCTTCAGG...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTGTCCTCTGTGAAGGCTaGCTGGAGTCCAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCVLCEG*LESRSS
Trigger: GCTGCTCCTGGACTCCAGCCAGCCTTCACAGAGGAC...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTGTGCCCAGCACTGTGTaGCCCCCACCAAGCGACCTG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCVPSTV*PPPSDL
Trigger: CAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCAC...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGAGACTCATCACCACTaGCTGAAGGTGCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVETHHH*LKVPST
Trigger: AGTGCTGGGCACCTTCAGCCAGTGGTGATGAGTCTC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTTGACAGGTACCAGGTaGGAATGTCTGCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQLTGTR*ECLPLL
Trigger: AAGCAAGGGCAGACATTCCCACCTGGTACCTGTCAA...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTTTATGAGCTCATACTaGCTCCCCAGCCATCGAAAA +
Preference number: 4 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPFMSSY*LPSHRK
Trigger: TTTTCGATGGCTGGGGAGCCAGTATGAGCTCATAAA...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCACTGTTCTTCCAGTCTaGTGTTCCCCGGTAAGATTC +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASTVLPV*CSPVRF
Trigger: GAATCTTACCGGGGAACATCAGACTGGAAGAACAGT...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCGACATGAGGGAAAATaGATGTCTTCAGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRRHEGK*MSSGPE
Trigger: TTCAGGGCCTGAAGACATTCATTTTCCCTCATGTCG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTTCTCCCGATCTGCTGTaGGAGAATCTGGCACGGGAC +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCSPDLL*ENLARD
Trigger: GTCCCGTGCCAGATTCTCTCACAGCAGATCGGGAGA...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGAGCTGTGGTCAGGCCTaGAGCTTTGTGGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVSCGQA*SFVELN
Trigger: ATTCAGCTCCACAAAGCTTCAGGCCTGACCACAGCT...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCCAGGAAAAGGCTGGGAATAAACCAACCTTTTaGACTGTAAGGTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GAHRVHGWDFTASQEKAGNKPTF*TVRCVA
Trigger: CGCCACACACCTTACAGTTCAAAAGGTTGGTTTATT...CCCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGGTTAAAACACTTCCTTaGCCCTGGAGAACGAGGATG +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQVKTLP*PWRTRM
Trigger: CATCCTCGTTCTCCAGGGTCAAGGAAGTGTTTTAAC...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAAAGGACATGAGCCCTaGGCAGGAACTCACATTCAT +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRKGHEP*AGTHIH
Trigger: ATGAATGTGAGTTCCTGCTCAGGGCTCATGTCCTTT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATCACTGTAAAAGGACATaGGCCCTGAGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADHCKRT*ALSRNS
Trigger: TGAGTTCCTGCTCAGGGCTCATGTCCTTTTACAGTG...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTTGCTGTTTGGTTTATaGGCTCATACTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQLLFGL*AHTGSP
Trigger: TGGGGAGCCAGTATGAGCTCATAAACCAAACAGCAA...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCATGAAGTTGTCCACTaGACAGGAAGCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFHEVVH*TGSVFF
Trigger: AAAGAAGACGCTTCCTGTTCAGTGGACAACTTCATG...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGGGGCGGCCGCCGCCATaGCAGTCGCTGCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEGRPPP*QSLPKQ
Trigger: TTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCC...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTTCACCCACCAGGTACTaGAGGAGCAGGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCSPTRY*RSRLYC
Trigger: GCAGTACAGCCTGCTCCTGCAGTACCTGGTGGGTGA...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATACACTGTCACCTCTGTaGCCACAACACCAAACAACC +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADTLSPL*PQHQTT
Trigger: GGTTGTTTGGTGTTGTGGGCACAGAGGTGACAGTGT...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACATGGATGGGATTTCACTaGATCCCAGGAAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTWMGFH*IPGKGW
Trigger: CCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCA...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCAAAGCCCCATCATTTaGACAAAACTCAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRQSPII*TKLSPV
Trigger: CACAGGGCTGAGTTTTGTGCAAATGATGGGGCTTTG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPARIRG*HHPSLQ
Trigger: CTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGC...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGGCCCATCGAGTTCATaGATGGGATTTCACTGCATC +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADGPSSS*MGFHCI
Trigger: GATGCAGTGAAATCCCATCCATGAACTCGATGGGCC...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCCTGAAAATTGCTGTTTaGTTTATGAGCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: APTGLAVMKPPSCETGRGLKIAV*FMSSYW
Trigger: CCAGTATGAGCTCATAAACCAAACAGCAATTTTCAG...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCGCTTTCCTTCAAAGTaGCATATCTTTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADERFPSK*HIFEAA
Trigger: GGCTGCCTCAAAGATATGCCACTTTGAAGGAAAGCG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATTACAAATGTCCCACCTaGCCATCGGTGTGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADYKCPT*PSVCLE
Trigger: TTCAAGGCACACCGATGGCCAGGTGGGACATTTGTA...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTGTTTGTGTTCGCGGTaGTCCAGGGAAGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVCLCSR*SREATN
Trigger: ATTGGTGGCTTCCCTGGACCACCGCGAACACAAACA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTACGGGACGTCCTCTGTaGAGGCTGGCTGGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPTGRPL*RLAGVQ
Trigger: CTGGACTCCAGCCAGCCTTCACAGAGGACGTCCCGT...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCAGAACACAAAACAAGTaGGATAATTGGTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFRTQNK*DNWLDG
Trigger: GCCGTCCAACCAATTATCTCACTTGTTTTGTGTTCT...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCGTGAAGGCAGTGTGTaGCTCTCGGCCGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPREGSV*LSAGTG
Trigger: TCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTCAAGCGACCTGCCTGTaGCCCACCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCQATCL*PTQEQR
Trigger: CCTTTGCTCTTGGGTGGGGCACAGGCAGGTCGCTTG...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGCTTCTGGCTCACCTTTaGCATGTGCTGCTACAGTAC +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVLLAHL*HVLLQY
Trigger: GTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAG...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTACTCTTGGCTGGACTTaGGATCCCGCCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPTLGWT*DPAQAP
Trigger: GGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGT...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAGACGGATAGTTGCATaGAGTTCCAAGGTAGAACAG +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRRRIVA*SSKVEQ
Trigger: CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTTGCGGGGAGGTGGGCTaGAGCCCTCTCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPCGEVG*SPLLAL
Trigger: AAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCGCA...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTCTCAGCCCTGTGGTGTaGATGTTTGTGTTCGCGGTG +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCLSPVV*MFVFAV
Trigger: CACCGCGAACACAAACATCCACACCACAGGGCTGAG...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCGAAGCTTTGTGGAGCTaGATTCCTATATGTCAACAT +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFEALWS*IPICQH
Trigger: ATGTTGACATATAGGAATTCAGCTCCACAAAGCTTC...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAGAACACAAAACAAGTaGGATAATTGGTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRRTQNK*DNWLDG
Trigger: GCCGTCCAACCAATTATCTCACTTGTTTTGTGTTCT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCAATAAACCAACCTTTTaGACTGTAAGGTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: FVLSSRERSNWPSSDEASNKPTF*TVRCVA
Trigger: CGCCACACACCTTACAGTTCAAAAGGTTGGTTTATT...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGGAAGCAACTGGACACTaGGTTTATTCTGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: TECERWLRVCGPEDRADEEATGH*VYSEDQ
Trigger: CTGATCTTCAGAATAAACTCAGTGTCCAGTTGCTTC...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATTTTCAGCACTTCTTTTaGAGTCGGTGTACGGTAAGG +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADFQHFF*SRCTVR
Trigger: CCTTACCGTACACCGACTGCAAAAGAAGTGCTGAAA...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAATGGCGAAATTTTTaGCATAGGACATTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: ISPPCPALVFETDSCMEFQWRNF*HRTFLS
Trigger: AGAGAGGAATGTCCTATGCCAAAAATTTCGCCATTG...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCAGTACAAGAAAACATaGCTCCCACAATGGCGAAAT +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRQYKKT*LPQWRN
Trigger: ATTTCGCCATTGTGGGAGCCATGTTTTCTTGTACTG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTCGCTTACTGAACCGATaGGTACTGACAGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCRLLNR*VLTALA
Trigger: CGCCAGGGCTGTCAGTACCCATCGGTTCAGTAAGCG...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCTGAAAATTGCTGTTTaGTTTATGAGCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPLKIAV*FMSSYW
Trigger: CCAGTATGAGCTCATAAACCAAACAGCAATTTTCAG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTTTGAGGCAGCCTTTTaGTCTAATCTGCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQFEAAF*SNLLVR
Trigger: TCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAA...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGAGAATACCAACGACATaGGGGAAAATGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRRIPTT*GKMNVF
Trigger: GAAGACATTCATTTTCCCTCATGTCGTTGGTATTCT...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTGGTAGAACAGCTTCCTaGGTGCCTGCAGAGACACTG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCGRTAS*VPAETL
Trigger: CAGTGTCTCTGCAGGCACTCAGGAAGCTGTTCTACC...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAAGAACACAAAACAAGTaGGATAATTGGTTGGACGGC +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTRTQNK*DNWLDG
Trigger: GCCGTCCAACCAATTATCTCACTTGTTTTGTGTTCT...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAAATAAACCAACCTTTTaGACTGTAAGGTGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CPALVFETDSCMEFQGRTNKPTF*TVRCVA
Trigger: CGCCACACACCTTACAGTTCAAAAGGTTGGTTTATT...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCCAAGAGCAAAGGCCTaGCTCCAGCAGTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPPRAKA*LQQCHP
Trigger: GGGATGACACTGCTGGAGTCAGGCCTTTGCTCTTGG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TACACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAAGCAACTGGACACTaGGTTTATTCTGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: YTECERWLRVCGPEDRADEATGH*VYSEDQ
Trigger: CTGATCTTCAGAATAAACTCAGTGTCCAGTTGCTTC...ATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTTGGATGGGATTTCACTaGATCCCAGGAAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCWMGFH*IPGKGW
Trigger: CCAGCCTTTTCCTGGGATGCAGTGAAATCCCATCCA...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGCCTTTTGGTCTAATCTaGTTGTCAGAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVPFGLI*LSEKLG
Trigger: ACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGG...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGACCTTTGCCATGTGCTaGTACAGTACAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVTFAMC*YSTNVP
Trigger: TGGGACATTTGTACTGTAGCAGCACATGGCAAAGGT...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAACTTCTGGCTCACCTTTaGCATGTGCTGCTACAGTAC +
Preference number: 4 (lower is better)
Translates to: KQFVLSSRERSNWPSSDELLAHL*HVLLQY
Trigger: GTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAG...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTTGCTGTGAGAGAATCTaGCACGGGACGTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCCCERI*HGTSSV
Trigger: CACAGAGGACGTCCCGTGCCAGATTCTCTCACAGCA...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGAGACGGATAGTTGCATaGAGTTCCAAGGTAGAACAG +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVRRIVA*SSKVEQ
Trigger: CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCT...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTAGGACCCTTCACATGTaGCCTCAAGCTCGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPRTLHM*PQARPG
Trigger: ACCTGGCCGAGCTTGAGGCCACATGTGAAGGGTCCT...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTCAGTGGCGTGAATATTaGCTCCCACCAGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCQWREY*LPPAEA
Trigger: TGCTTCGGCTGGTGGGAGCCAATATTCACGCCACTG...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTACTGTTCTTCCAGTCTaGTGTTCCCCGGTAAGATTC +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCTVLPV*CSPVRF
Trigger: GAATCTTACCGGGGAACATCAGACTGGAAGAACAGT...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTTCCCACGTGCTAGACTaGAAGATGGAAGATCCCAGG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCSHVLD*KMEDPR
Trigger: CCTGGGATCTTCCATCTTTCAGTCTAGCACGTGGGA...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAATTCTCGATCATCTTCTaGTCCTCACTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEFSIIF*SSLLAG
Trigger: TCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAA...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTTCCTGTCTCCCGATCTaGTGTGAGAGAATCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCSCLPI*CERIWH
Trigger: GTGCCAGATTCTCTCACAGCAGATCGGGAGACAGGA...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGCAGTCCGCCTTGCCCTaGCCTGGTATTCGAGACGGA +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEQSALP*PGIRDG
Trigger: TCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTG...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPLEGQL*SGLKLC
Trigger: ACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTTCAGATGTTATCTTTaGGCCACCCGGCACTATTTT +
Preference number: 4 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVFRCYL*ATRHYF
Trigger: AAAATAGTGCCGGGTGGCCCAAAGATAACATCTGAA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTTGCACAAAACTCAGCCCTGTGGTGTGGATGTTTGTGTTCGCGGTGGTCCAGGCTGAAAATTGCTGTTTaGTTTATGAGCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: FAQNSALWCGCLCSRWSRLKIAV*FMSSYW
Trigger: CCAGTATGAGCTCATAAACCAAACAGCAATTTTCAG...CCTGGACCACCGCGAACACAAACATCCACACCACAGGGCTGAGTTTTGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTGTTACCAGCTGGGTTTaGCATCATCACTCATGTACA +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCVTSWV*HHHSCT
Trigger: TGTACATGAGTGATGATGTCAAACCCAGCTGGTAAC...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTAGAAAATGGCAAACATaGCCCAAGGAAGGTGTTACC +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCRKWQT*PKEGVT
Trigger: GGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCT...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTTATTCATCTCTCGAGTaGATAGGCAGCGTGGACAAT +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCYSSLE*IGSVDN
Trigger: ATTGTCCACGCTGCCTATTCACTCGAGAGATGAATA...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAATTTCAGCACTTCTTTTaGAGTCGGTGTACGGTAAGG +
Preference number: 4 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEFQHFF*SRCTVR
Trigger: CCTTACCGTACACCGACTGCAAAAGAAGTGCTGAAA...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTTTTCAGCACTTCTTTTaGAGTCGGTGTACGGTAAGG +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCFQHFF*SRCTVR
Trigger: CCTTACCGTACACCGACTGCAAAAGAAGTGCTGAAA...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAATTCGAGACGGATAGTTaGATGGAGTTCCAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEFETDS*MEFQGR
Trigger: TCTACCTTGGAACTCCATGCAACTATCCGTCTCGAA...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTCTCACCTTTGCCATGTaGTGCTACAGTACAAATGTC +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCLTFAM*CYSTNV
Trigger: GACATTTGTACTGTAGCAGCACATGGCAAAGGTGAG...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTGGCCCATCGAGTTCATaGATGGGATTTCACTGCATC +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCGPSSS*MGFHCI
Trigger: GATGCAGTGAAATCCCATCCATGAACTCGATGGGCC...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
3UTR CAA 72 bp ACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTaGAGGCAGCCTTTTGGTCTAATCTGCTTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TLLYAFLQSGIS*RQPFGLICLSE
Trigger: CTCTGACAAGCAGATTAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGAGAGAGTCAGTGGCGTaGATATTGGCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFERESVA*ILAPTS
Trigger: GCTGGTGGGAGCCAATATTCACGCCACTGACTCTCT...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTACACTGTCACCTCTGTaGCCACAACACCAAACAACC +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPTLSPL*PQHQTT
Trigger: GGTTGTTTGGTGTTGTGGGCACAGAGGTGACAGTGT...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTCAGTACAAGAAAACATaGCTCCCACAATGGCGAAAT +
Preference number: 4 (lower is better)
Translates to: SFVELNSYMSTSCLPICCQYKKT*LPQWRN
Trigger: ATTTCGCCATTGTGGGAGCCATGTTTTCTTGTACTG...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGCTAGAGGGCCAGCTGTaGTCAGGCCTGAAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFELEGQL*SGLKLC
Trigger: ACAAAGCTTCAGGCCTGACCACAGCTGGCCCTCTAG...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTCAAAACTCAGCCCTGTaGTGTGGATGTTTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCQNSAL*CGCLCS
Trigger: CGAACACAAACATCCACACCACAGGGCTGAGTTTTG...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTTTTCCAAGGCTGTTGTaGGGGCAGCATCTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPFPRLL*GQHLLY
Trigger: ATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAA...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGGGCATCATCCTTCCCTaGAGGCAATTACTCTCACCG +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEGIILP*RQLLSP
Trigger: CGGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCC...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGATCTTGGCCAGTAGCTaGTGTGACCGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEILASS*CDRVTK
Trigger: CTTGGTGACTCGGTCACAGCAGCTACTGGCCAAGAT...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTACCTTTGCCATGTGCTaGTACAGTACAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCTFAMC*YSTNVP
Trigger: TGGGACATTTGTACTGTAGCAGCACATGGCAAAGGT...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCATCGAGTTCATGGATaGGATTTCACTGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPHRVHG*DFTASQ
Trigger: CTGGGATGCAGTGAAATCCCATCCATGAACTCGATG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTAGAAAATGGCAAACATaGCCCAAGGAAGGTGTTACC +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPRKWQT*PKEGVT
Trigger: GGTAACACCTTCCTTGGGTCATGTTTGCCATTTTCT...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGCACTGTAAAAGGACATaGGCCCTGAGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEHCKRT*ALSRNS
Trigger: TGAGTTCCTGCTCAGGGCTCATGTCCTTTTACAGTG...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCCTTTTGGTCTAATCTaGTTGTCAGAGAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPPFGLI*LSEKLG
Trigger: ACCCAGCTTCTCTGACAAGCAGATTAGACCAAAAGG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGCTTCTGGCTCACCTTTaGCATGTGCTGCTACAGTAC +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFELLAHL*HVLLQY
Trigger: GTACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAG...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGTTGACAGGTACCAGGTaGGAATGTCTGCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFELTGTR*ECLPLL
Trigger: AAGCAAGGGCAGACATTCCCACCTGGTACCTGTCAA...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR GCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGTTCTCGATCATCTTCTaGTCCTCACTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEFSIIF*SSLLAG
Trigger: TCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAA...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp CACACAACTAGGCCAAGAAAAATACCACAAGGTCAAGTCGAAAACACGACATGTCAATGGCGAAATTTTTaGCATAGGACATTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HTTRPRKIPQGQVENTTCQWRNF*HRTFLS
Trigger: AGAGAGGAATGTCCTATGCCAAAAATTTCGCCATTG...ACATGTCGTGTTTTCGACTTGACCTTGTGGTATTTTTCTTGGCCTAGTTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGAGTGAGATAATTGGTTaGACGGCATCAGTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFESEIIG*TASVRL
Trigger: AAGGCGGACTGATGCCGTCCAACCAATTATCTCACT...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR TCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGGTTACCAGCTGGGTTTaGCATCATCACTCATGTACA +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEVTSWV*HHHSCT
Trigger: TGTACATGAGTGATGATGTCAAACCCAGCTGGTAAC...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CCA 90 bp TTCTTTTATGTAAACGCTTCTCTACGCTTTCCTTCAAAGTGGCATATCTTTGAGTTCAGATGTTATCTTTaGGCCACCCGGCACTATTTT +
Preference number: 4 (lower is better)
Translates to: FFYVNASLRFPSKWHIFEFRCYL*ATRHYF
Trigger: AAAATAGTGCCGGGTGGCCCAAAGATAACATCTGAA...CTCAAAGATATGCCACTTTGAAGGAAAGCGTAGAGAAGCGTTTACATAAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS TCA 90 bp GGACTTGGGATCCCGCCCAGGCTCCCAGGCTCCAGGAGCCGGGGCTaGCGCTTGTCACCCACCAGGTACTGCAGGAGCAGGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: GLGIPPRLPGSRSRG*RLSPTRYCRSRLYC
Trigger: GCAGTACAGCCTGCTCCTGCAGTACCTGGTGGGTGACAAGCGTCAGCCCCGGCTCCTGGAGCCTGGGAGCCTGGGCGGGATCCCAAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCCGGCATCAGTCCGCCTaGCCCTGCCCTGGTATTCGA +
Preference number: 5 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIRHQSA*PCPGIR
Trigger: TCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCG...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 90 bp CATCGCCTTCTCGATCATCTTCTGCTCCTCACTCTTGGCTGGACTTaGGATCCCGCCCAGGCTCCCAGGCTCCAGGAGCCGGGGCTGACG +
Preference number: 5 (lower is better)
Translates to: HRLLDHLLLLTLGWT*DPAQAPRLQEPGLT
Trigger: CGTCAGCCCCGGCTCCTGGAGCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 90 bp GCTTTCCATCGCCTTCTCGATCATCTTCTGCTCCTCACTCTTGGCTaGACTTGGGATCCCGCCCAGGCTCCCAGGCTCCAGGAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: AFHRLLDHLLLLTLG*TWDPAQAPRLQEPG
Trigger: CCCCGGCTCCTGGAGCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCTTCTGCTCCTCACTCTaGGCTGGACTTGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIFCSSL*AGLGIP
Trigger: CGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAA...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACCGGCATCAGTCCGCCTaGCCCTGCCCTGGTATTCGA +
Preference number: 5 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHRHQSA*PCPGIR
Trigger: TCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCG...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 90 bp CGCAGCTTTCCATCGCCTTCTCGATCATCTTCTGCTCCTCACTCTTaGCTGGACTTGGGATCCCGCCCAGGCTCCCAGGCTCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RSFPSPSRSSSAPHS*LDLGSRPGSQAPGA
Trigger: GGCTCCTGGAGCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGGAAAGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAGGGTCAAAGCCCACGTaGGTATCGATGCCAGCGGTA +
Preference number: 5 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGGSKPT*VSMPAV
Trigger: TACCGCTGGCATCGATACCAACGTGGGCTTTGACCC...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CGGGGAGGTGGGCTGGAGCCCTCTCCTTGCTCTTCACAAAGGCCTCCGGATCAGGGGTCAAAGCCCACGTaGGTATCGATGCCAGCGGTA +
Preference number: 5 (lower is better)
Translates to: RGGGLEPSPCSSQRPPDQGSKPT*VSMPAV
Trigger: TACCGCTGGCATCGATACCAACGTGGGCTTTGACCC...CTGATCCGGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGCCCACCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGACAGCGACGTCTGATCTaGGCCAGTAGCTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGQRRLI*ASSCCD
Trigger: GTCACAGCAGCTACTGGCCAAGATCAGACGTCGCTG...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACGCTGGAGCCCTCTCCTaGCTCTTCACAAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VPLGRHRRGPSSSWMGFHAGALS*LFTKAS
Trigger: GGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGC...GTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCAGGCATCCTAGGACTTaGACAGGTACCAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SHVVKAVCASRPAQEGPIRHPRT*TGTRWE
Trigger: TTCCCACCTGGTACCTGTCAAAGTCCTAGGATGCCT...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCTCCAACTGGCCTAGCAGTGATGAAGCCTCCTAGCTGTGAGACTGGGAGGGGCGCTGGAGCCCTCTCCTaGCTCTTCACAAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: APTGLAVMKPPSCETGRGAGALS*LFTKAS
Trigger: GGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGC...GCCCCTCCCAGTCTCACAGCTAGGAGGCTTCATCACTGCTAGGCCAGTTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCGGGTCAAAGCCCACGTaGGTATCGATGCCAGCGGTA +
Preference number: 5 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIGSKPT*VSMPAV
Trigger: TACCGCTGGCATCGATACCAACGTGGGCTTTGACCC...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAAGGCATCCTAGGACTTaGACAGGTACCAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGRHPRT*TGTRWE
Trigger: TTCCCACCTGGTACCTGTCAAAGTCCTAGGATGCCT...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAGCTTCTGGCTCACCTTaGCCATGTGCTGCTACAGTA +
Preference number: 5 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGASGSP*PCAATV
Trigger: TACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGC...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS GCA 90 bp GCAGCCTTGAAAGCGCAGCTTTCCATCGCCTTCTCGATCATCTTCTaGTCCTCACTCTTGGCTGGACTTGGGATCCCGCCCAGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: AALKAQLSIAFSIIF*SSLLAGLGIPPRLP
Trigger: TGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGGAAAGCTGCGCTTTCAAGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TCACCACTGGCTGAAGGTGCCCAGCACTGTGTGGCCCCCACCAAGCGACCTGCCCTTTCAGCACTTCTTTaGCAGTCGGTGTACGGTAAG +
Preference number: 5 (lower is better)
Translates to: SPLAEGAQHCVAPTKRPALSALL*QSVYGK
Trigger: CTTACCGTACACCGACTGCAAAAGAAGTGCTGAAAG...GGCAGGTCGCTTGGTGGGGGCCACACAGTGCTGGGCACCTTCAGCCAGTGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAGCAGATGTAATGAGCTaGGTGAGGATGACACAGTCC +
Preference number: 5 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGADVMS*VRMTQS
Trigger: GGACTGTGTCATCCTCACCAAGCTCATTACATCTGC...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGAGCAAAGCCCCATCATTaGCACAAAACTCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: QCVPLGRHRRGPSSSWMGAKPHH*HKTQPC
Trigger: ACAGGGCTGAGTTTTGTGCAAATGATGGGGCTTTGC...TCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCTTCTGCTCCTCACTCTaGGCTGGACTTGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPFCSSL*AGLGIP
Trigger: CGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAA...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAGGCCAGCGCAGCCTaGAAAGCGCAGCTTTCCATC +
Preference number: 5 (lower is better)
Translates to: ISPPCPALVFETDSCMEFQASAA*KAQLSI
Trigger: GATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCTG...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCTGGGAATGTCTGCCCTaGCTTCAGAGTGCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCIWECLP*LQSACR
Trigger: CCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCA...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TTTTGGTCTAATCTGCTTGTCAGAGAAGCTGGGTCTCCGAGGGCCCACCCTCCCCTGTGGTGTGGATGTTaGTGTTCGCGGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FWSNLLVREAGSPRAHPPLWCGC*CSRWSR
Trigger: CCTGGACCACCGCGAACACAAACATCCACACCACAG...GGGAGGGTGGGCCCTCGGAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTGCAAAGCCCCATCATTaGCACAAAACTCAGCCCTGT +
Preference number: 5 (lower is better)
Translates to: ASSSARSSSHVVKAVCASAKPHH*HKTQPC
Trigger: ACAGGGCTGAGTTTTGTGCAAATGATGGGGCTTTGC...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS GCA 90 bp TCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCTTCCCTaGAGGCAATTACTCTCACCGGAGGTAATAATCAATCGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SSREQPGSGAGIILP*RQLLSPEVIINRSR
Trigger: TCTGCTGCGATTGATTATTACCTCCGGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 90 bp TGTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAGGCAATTACTCTCACCGGAGGTAAT +
Preference number: 5 (lower is better)
Translates to: CGTETVLQRAARIRG*HHPSLQAITLTGGN
Trigger: ATTACCTCCGGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCAGGCCAGCGCAGCCTaGAAAGCGCAGCTTTCCATC +
Preference number: 5 (lower is better)
Translates to: TECERWLRVCGPEDRADEQASAA*KAQLSI
Trigger: GATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCTG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCAGCATCTCTTGTATTaGGTCCCACGTGCTAGACTG +
Preference number: 5 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIQHLLY*VPRARL
Trigger: CAGTCTAGCACGTGGGACCAAATACAAGAGATGCTG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTTTTGGTCTAATCTGCTaGTCAGAGAAGCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: ASSSARSSSHVVKAVCASFGLIC*SEKLGL
Trigger: GAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAA...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS TCA 90 bp ATGCACCTCCTAAGACAAATCCTCCCACGCAGGCCAGCGCAGCCTTaGAAGCGCAGCTTTCCATCGCCTTCTCGATCATCTTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: MHLLRQILPRRPAQP*KRSFPSPSRSSSAP
Trigger: AGGAGCAGAAGATGATCGAGAAGGCGATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCTGCGTGGGAGGATTTGTCTTAGGAGGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCTTTCAGCACTTCTTTaGCAGTCGGTGTACGGTAAG +
Preference number: 5 (lower is better)
Translates to: VVQKLSSREQPGSGAGIILSALL*QSVYGK
Trigger: CTTACCGTACACCGACTGCAAAAGAAGTGCTGAAAG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGCTTTCAGCACTTCTTTaGCAGTCGGTGTACGGTAAG +
Preference number: 5 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWLSALL*QSVYGK
Trigger: CTTACCGTACACCGACTGCAAAAGAAGTGCTGAAAG...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CTCGGCCGGCACAGGAGGGGCCCATCGAGTTCATGGATGGGATTTCACTGCATCCTTCAGATGTTATCTTaGGGCCACCCGGCACTATTT +
Preference number: 5 (lower is better)
Translates to: LGRHRRGPSSSWMGFHCILQMLS*GHPALF
Trigger: AAATAGTGCCGGGTGGCCCAAAGATAACATCTGAAG...GATGCAGTGAAATCCCATCCATGAACTCGATGGGCCCCTCCTGTGCCGGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCCAGCGACGTCTGATCTaGGCCAGTAGCTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: FVLSSRERSNWPSSDEASQRRLI*ASSCCD
Trigger: GTCACAGCAGCTACTGGCCAAGATCAGACGTCGCTG...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCCTCAAGCTCGGCCAGGTCCAGCAGTCACGTCGTGAAGGCAGTGTGTGCCTCTTGTTACCAGCTGGGTTaGACATCATCACTCATGTAC +
Preference number: 5 (lower is better)
Translates to: ASSSARSSSHVVKAVCASCYQLG*TSSLMY
Trigger: GTACATGAGTGATGATGTCAAACCCAGCTGGTAACA...AGAGGCACACACTGCCTTCACGACGTGACTGCTGGACCTGGCCGAGCTTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCTGTGGTGTGGATGTTaGTGTTCGCGGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TECERWLRVCGPEDRADELWCGC*CSRWSR
Trigger: CCTGGACCACCGCGAACACAAACATCCACACCACAG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGTCACGTCGTGAAGGCAGTGTGTGCCTCTCGGCCGGCACAGGAGGGGCCCATCTCTGAAAATTGCTGTTaGGTTTATGAGCTCATACTG +
Preference number: 5 (lower is better)
Translates to: SHVVKAVCASRPAQEGPISENCC*VYELIL
Trigger: CAGTATGAGCTCATAAACCAAACAGCAATTTTCAGA...GATGGGCCCCTCCTGTGCCGGCCGAGAGGCACACACTGCCTTCACGACGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ATCTGTTTACCTAGTTCACTCCCCTTGAGCCTCCCTGTGGCCCACGGGGGCTGGCAAAGTGGCATATCTTaGAGGCAGCCTTTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: ICLPSSLPLSLPVAHGGWQSGIS*RQPFGL
Trigger: TAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTG...CCAGCCCCCGTGGGCCACAGGGAGGCTCAAGGGGAGTGAACTAGGTAAACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GTGGTACAGAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTGGCATCATCCAAAGTGGCATATCTTaGAGGCAGCCTTTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: VVQKLSSREQPGSGAGIIQSGIS*RQPFGL
Trigger: TAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTG...GATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTCTGTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGCTGGAGCCCTCTCCTaGCTCTTCACAAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVAGALS*LFTKAS
Trigger: GGAGGCCTTTGTGAAGAGCAAGGAGAGGGCTCCAGC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTTCTGCTCCTCACTCTaGGCTGGACTTGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVFCSSL*AGLGIP
Trigger: CGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGTGGGAATGTCTGCCCTaGCTTCAGAGTGCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQWECLP*LQSACR
Trigger: CCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCA...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCGAAAGTGGCATGAAGTaGTCCACTGAACAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: ISPPCPALVFETDSCMEFESGMK*STEQEA
Trigger: CGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTC...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAAGCCTCCGCTTCTGGCTCACCTTaGCCATGTGCTGCTACAGTA +
Preference number: 5 (lower is better)
Translates to: FVLSSRERSNWPSSDEASASGSP*PCAATV
Trigger: TACTGTAGCAGCACATGGCAAAGGTGAGCCAGAAGC...GGAGGCTTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGCAGCATCTCTTGTATTaGGTCCCACGTGCTAGACTG +
Preference number: 5 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQQHLLY*VPRARL
Trigger: CAGTCTAGCACGTGGGACCAAATACAAGAGATGCTG...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS GCA 90 bp GGCATAGGACATTCCTCTCTGCCCCATGTCTTTCAGCACTTCTTTTaGAGTCGGTGTACGGTAAGGATCCTTAGGGTCAAAGCCCACGTT +
Preference number: 5 (lower is better)
Translates to: GIGHSSLPHVFQHFF*SRCTVRILRVKAHV
Trigger: AACGTGGGCTTTGACCCTAAGGATCCTTACCGTACACCGACTGCAAAAGAAGTGCTGAAAGACATGGGGCAGAGAGGAATGTCCTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGCTTCAGATGTTATCTTaGGGCCACCCGGCACTATTT +
Preference number: 5 (lower is better)
Translates to: TECERWLRVCGPEDRADELQMLS*GHPALF
Trigger: AAATAGTGCCGGGTGGCCCAAAGATAACATCTGAAG...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGCAGATGTAATGAGCTaGGTGAGGATGACACAGTCC +
Preference number: 5 (lower is better)
Translates to: CPALVFETDSCMEFQGRTADVMS*VRMTQS
Trigger: GGACTGTGTCATCCTCACCAAGCTCATTACATCTGC...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAACAGCGACGTCTGATCTaGGCCAGTAGCTGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEQRRLI*ASSCCD
Trigger: GTCACAGCAGCTACTGGCCAAGATCAGACGTCGCTG...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGAAAGTGGCATGAAGTaGTCCACTGAACAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: CPALVFETDSCMEFQGRTESGMK*STEQEA
Trigger: CGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTC...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTCTGTGGTGTGGATGTTaGTGTTCGCGGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SFVELNSYMSTSCLPICCLWCGC*CSRWSR
Trigger: CCTGGACCACCGCGAACACAAACATCCACACCACAG...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTCGGCATCAGTCCGCCTaGCCCTGCCCTGGTATTCGA +
Preference number: 5 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPRHQSA*PCPGIR
Trigger: TCGAATACCAGGGCAGGGCAAGGCGGACTGATGCCG...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp TGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACACTTCAGATGTTATCTTaGGGCCACCCGGCACTATTT +
Preference number: 5 (lower is better)
Translates to: CPALVFETDSCMEFQGRTLQMLS*GHPALF
Trigger: AAATAGTGCCGGGTGGCCCAAAGATAACATCTGAAG...TGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGCAGCATCTCTTGTATTaGGTCCCACGTGCTAGACTG +
Preference number: 5 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVQHLLY*VPRARL
Trigger: CAGTCTAGCACGTGGGACCAAATACAAGAGATGCTG...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp GCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCCAAGGTAGAACAGCAAAGTGGCATATCTTaGAGGCAGCCTTTTGGTCTA +
Preference number: 5 (lower is better)
Translates to: ALPWYSRRIVAWSSKVEQQSGIS*RQPFGL
Trigger: TAGACCAAAAGGCTGCCTCAAAGATATGCCACTTTG...CTGTTCTACCTTGGAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGGAAAGTGGCATGAAGTaGTCCACTGAACAGGAAGCG +
Preference number: 5 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVESGMK*STEQEA
Trigger: CGCTTCCTGTTCAGTGGACAACTTCATGCCACTTTC...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AAACAATTTGTTCTGAGCTCTAGGGAACGCTCCAACTGGCCTAGCAGTGATGAATGGGAATGTCTGCCCTaGCTTCAGAGTGCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: KQFVLSSRERSNWPSSDEWECLP*LQSACR
Trigger: CCTACAAGCACTCTGAAGCAAGGGCAGACATTCCCA...TTCATCACTGCTAGGCCAGTTGGAGCGTTCCCTAGAGCTCAGAACAAATTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTAGGCATCCTAGGACTTaGACAGGTACCAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SFVELNSYMSTSCLPICCRHPRT*TGTRWE
Trigger: TTCCCACCTGGTACCTGTCAAAGTCCTAGGATGCCT...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp CATCTTTTCCAAGGCTGTTGTGAGGGCAGCATCTCTTGTATTTGGTCCCACGTGTTTGGTCTAATCTGCTaGTCAGAGAAGCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: HLFQGCCEGSISCIWSHVFGLIC*SEKLGL
Trigger: GAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAA...CACGTGGGACCAAATACAAGAGATGCTGCCCTCACAACAGCCTTGGAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ATCAGTCCGCCTTGCCCTGCCCTGGTATTCGAGACGGATAGTTGCATGGAGTTCTCTGAAAATTGCTGTTaGGTTTATGAGCTCATACTG +
Preference number: 5 (lower is better)
Translates to: ISPPCPALVFETDSCMEFSENCC*VYELIL
Trigger: CAGTATGAGCTCATAAACCAAACAGCAATTTTCAGA...GAACTCCATGCAACTATCCGTCTCGAATACCAGGGCAGGGCAAGGCGGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp ACTGAGTGTGAACGCTGGTTAAGAGTGTGTGGGCCAGAAGACAGGGCAGATGAGTCTGAAAATTGCTGTTaGGTTTATGAGCTCATACTG +
Preference number: 5 (lower is better)
Translates to: TECERWLRVCGPEDRADESENCC*VYELIL
Trigger: CAGTATGAGCTCATAAACCAAACAGCAATTTTCAGA...CTCATCTGCCCTGTCTTCTGGCCCACACACTCTTAACCAGCGTTCACACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AGCTTTGTGGAGCTGAATTCCTATATGTCAACATCCTGTCTCCCGATCTGCTGTTTTGGTCTAATCTGCTaGTCAGAGAAGCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: SFVELNSYMSTSCLPICCFGLIC*SEKLGL
Trigger: GAGACCCAGCTTCTCTGACAAGCAGATTAGACCAAA...ACAGCAGATCGGGAGACAGGATGTTGACATATAGGAATTCAGCTCCACAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS-3UTR CAA 90 bp AATACCACAAGGTCAAGTCGAAAACACGACATGTTAAAACACTTCCTTGACCCTTGTTACCAGCTGGGTTaGACATCATCACTCATGTAC +
Preference number: 5 (lower is better)
Translates to: NTTRSSRKHDMLKHFLDPCYQLG*TSSLMY
Trigger: GTACATGAGTGATGATGTCAAACCCAGCTGGTAACA...AGGGTCAAGGAAGTGTTTTAACATGTCGTGTTTTCGACTTGACCTTGTGGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CAA 72 bp GCGGAACCCGCTGTCTCAGGGGCCGAGCCTCCGGCATaGGGGGCGGCCGCCGCCATGACAGTCGCTGCCCAA +
Preference number: 6 (lower is better)
Translates to: AEPAVSGAEPPA*GAAAAMTVAAQ
Trigger: TTGGGCAGCGACTGTCATGGCGGCGGCCGCCCCCAATGCCGGAGGCTCGGCCCCTGAGACAGCGGGTTCCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613269.2
ENST00000617832.2
CDS CAA 90 bp GGAGCTTCGGCGGAACCCGCTGTCTCAGGGGCCGAGCCTCCGGCATaGGGGGCGGCCGCCGCCATGACAGTCGCTGCCCAAGCAACCCTC +
Preference number: 6 (lower is better)
Translates to: GASAEPAVSGAEPPA*GAAAAMTVAAQATL
Trigger: GAGGGTTGCTTGGGCAGCGACTGTCATGGCGGCGGCCGCCCCCAATGCCGGAGGCTCGGCCCCTGAGACAGCGGGTTCCGCCGAAGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613269.2
ENST00000617832.2
CDS GCA 72 bp TTGTCACCCACCAGGTACTGCAGGAGCAGGCTGTACTaGAGCGGAGCTTCGGCGGAACCCGCTGTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: LSPTRYCRSRLY*SGASAEPAVSG
Trigger: CCCTGAGACAGCGGGTTCCGCCGAAGCTCCGCTGCAGTACAGCCTGCTCCTGCAGTACCTGGTGGGTGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CAA 90 bp GCGCAGCTTTCCATCGCCTTCTCGATCATCTTCTGCTCCTCACTCTaGGCTGGACTTGGGATCCCGCCCAGGCTCCCAGGCTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: AQLSIAFSIIFCSSL*AGLGIPPRLPGSRS
Trigger: GCTCCTGGAGCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGGAAAGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 72 bp CGCCTTCTCGATCATCTTCTGCTCCTCACTCTTGGCTaGACTTGGGATCCCGCCCAGGCTCCCAGGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RLLDHLLLLTLG*TWDPAQAPRLQ
Trigger: CTGGAGCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 72 bp CCATCGCCTTCTCGATCATCTTCTGCTCCTCACTCTTaGCTGGACTTGGGATCCCGCCCAGGCTCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: PSPSRSSSAPHS*LDLGSRPGSQA
Trigger: AGCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CAA 72 bp TCCATCGCCTTCTCGATCATCTTCTGCTCCTCACTCTaGGCTGGACTTGGGATCCCGCCCAGGCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SIAFSIIFCSSL*AGLGIPPRLPG
Trigger: GCCTGGGAGCCTGGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 72 bp GAAACTGTCCTCCAGAGAGCAGCCCGGATCCGGGGCTaGCATCATCCTTCCCTGCAGGCAATTACTCTCACC +
Preference number: 6 (lower is better)
Translates to: ETVLQRAARIRG*HHPSLQAITLT
Trigger: GGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGCTGCTCTCTGGAGGACAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS GCA 72 bp AAAGCGCAGCTTTCCATCGCCTTCTCGATCATCTTCTaGTCCTCACTCTTGGCTGGACTTGGGATCCCGCCC +
Preference number: 6 (lower is better)
Translates to: KAQLSIAFSIIF*SSLLAGLGIPP
Trigger: GGGCGGGATCCCAAGTCCAGCCAAGAGTGAGGAGCAGAAGATGATCGAGAAGGCGATGGAAAGCTGCGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CAA 72 bp CCTAAGACAAATCCTCCCACGCAGGCCAGCGCAGCCTaGAAAGCGCAGCTTTCCATCGCCTTCTCGATCATC +
Preference number: 6 (lower is better)
Translates to: PKTNPPTQASAA*KAQLSIAFSII
Trigger: GATGATCGAGAAGGCGATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCTGCGTGGGAGGATTTGTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CAA 90 bp AATGCACCTCCTAAGACAAATCCTCCCACGCAGGCCAGCGCAGCCTaGAAAGCGCAGCTTTCCATCGCCTTCTCGATCATCTTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: NAPPKTNPPTQASAA*KAQLSIAFSIIFCS
Trigger: GGAGCAGAAGATGATCGAGAAGGCGATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCTGCGTGGGAGGATTTGTCTTAGGAGGTGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS TCA 72 bp CTAAGACAAATCCTCCCACGCAGGCCAGCGCAGCCTTaGAAGCGCAGCTTTCCATCGCCTTCTCGATCATCT +
Preference number: 6 (lower is better)
Translates to: LRQILPRRPAQP*KRSFPSPSRSS
Trigger: AGATGATCGAGAAGGCGATGGAAAGCTGCGCTTTCAAGGCTGCGCTGGCCTGCGTGGGAGGATTTGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS GCA 72 bp GAGCAGCCCGGATCCGGGGCTGGCATCATCCTTCCCTaGAGGCAATTACTCTCACCGGAGGTAATAATCAAT +
Preference number: 6 (lower is better)
Translates to: EQPGSGAGIILP*RQLLSPEVIIN
Trigger: ATTGATTATTACCTCCGGTGAGAGTAATTGCCTGCAGGGAAGGATGATGCCAGCCCCGGATCCGGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS TCA 72 bp CGTGATGCAGCCACTGATGACACTGTTCTTCCAGTCTaGTGTTCCCCGGTAAGATTCTATCAAACACTCAGT +
Preference number: 6 (lower is better)
Translates to: RDAATDDTVLPV*CSPVRFYQTLS
Trigger: ACTGAGTGTTTGATAGAATCTTACCGGGGAACATCAGACTGGAAGAACAGTGTCATCAGTGGCTGCATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2
CDS CCA 72 bp TCAAACACTCAGTACAAGAAAACATGGCTCCCACAATaGCGAAATTTTTGGCATAGGACATTCCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SNTQYKKTWLPQ*RNFWHRTFLSA
Trigger: GGCAGAGAGGAATGTCCTATGCCAAAAATTTCGCCATTGTGGGAGCCATGTTTTCTTGTACTGAGTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327158.5
ENST00000613269.2
ENST00000617832.2