Pregenerated sensors for TIMM10 (Homo sapiens)
Ensembl gene IDs: ENSG00000134809Ensembl transcript IDs: ENST00000257245.9, ENST00000525158.1, ENST00000525587.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATATATATATATACACATACATACACACACAGTCACATTCCAGTGTaGCAAATACTCCTTCACCAGGAGACAGCGCTACCACTCCGGGAT | + |
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Preference number: 1 (lower is better) Translates to: IYIYTHTYTHSHIPV*QILLHQETALPLRD Trigger: ATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGAGTATTTGTCACACTGGAATGTGACTGTGTGTGTATGTATGTGTATATATATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGTGTGACAAATACTCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCGGCAGTCTTCACAGATaGCACCCAACAGGGAGCACG | + |
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Preference number: 2 (lower is better) Translates to: FQCDKYSFTRRQRYHSGIGSLHR*HPTGST Trigger: CGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGCC...GATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGAGTATTTGTCACACTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| 3UTR TCA 72 bp | CCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTaGAGACTCTCTACAGAGAGCCTAGGCCTGGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: PSPGDSATTPGS*RLSTESLGLAV Trigger: GACTGCCAGGCCTAGGCTCTCTGTAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR GCA 90 bp | GATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACCGCAGGCCCAGAGCTCTaGTGCACCCTCTTCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: DDTQQGARLLKWEGVGYTAGPEL*CTLFIS Trigger: GCTGATGAAGAGGGTGCAGCAGAGCTCTGGGCCTGC...GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR GCA 90 bp | GATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACCCTGACAGGGACCTCATaGAGGCCCAGAGCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DDTQQGARLLKWEGVGYTLTGTS*RPRALL Trigger: CAGCAGAGCTCTGGGCCTGCATGAGGTCCCTGTCAG...GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | GATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACCTCCGCAGCCAGCTGTTaGGCCCTGAGAGGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: DDTQQGARLLKWEGVGYTSAASC*ALRGSI Trigger: GATGGATCCTCTCAGGGCCCAACAGCTGGCTGCGGA...GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR TCA 90 bp | AGCCTAGGCCTGGCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTACCCCAGGGTGTATACTaGCAGGGACCTCATGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLGLAVFTDDTQQGARLLPQGVY*QGPHAG Trigger: GCCTGCATGAGGTCCCTGTCAGTATACACCCTGGGG...TAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGCCAGGCCTAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR TCA 90 bp | TTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGCCCCAGGGTGTATACTaGCAGGGACCTCATGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FTDDTQQGARLLKWEGVGPQGVY*QGPHAG Trigger: GCCTGCATGAGGTCCCTGTCAGTATACACCCTGGGG...CCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR GCA 90 bp | TTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGCTGACAGGGACCTCATaGAGGCCCAGAGCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FTDDTQQGARLLKWEGVGLTGTS*RPRALL Trigger: CAGCAGAGCTCTGGGCCTGCATGAGGTCCCTGTCAG...CCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | GATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACCCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: DDTQQGARLLKWEGVGYTLSLAP*KGSPSG Trigger: GCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAG...GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | TTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTCCGCAGCCAGCTGTTaGGCCCTGAGAGGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: FTDDTQQGARLLKWEGVGSAASC*ALRGSI Trigger: GATGGATCCTCTCAGGGCCCAACAGCTGGCTGCGGA...CCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | TCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTGAAGACTCTCTACAGAGGCACACACTTCCGGTaGCAGGCACTGGTCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SFTRRQRYHSGILKTLYRGTHFR*QALVIL Trigger: CAGAATGACCAGTGCCTGCCACCGGAAGTGTGTGCC...TCTGTAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR TCA 90 bp | CAGTCACATTCCAGTGTGACAAATACTCCTTCACCAGGAGACAGCGCTACCACTCCAGCTGTTGGGCCCTaGGAGGATCCATCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QSHSSVTNTPSPGDSATTPAVGP*EDPSQP Trigger: AGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGG...AGTGGTAGCGCTGTCTCCTGGTGAAGGAGTATTTGTCACACTGGAATGTGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR TCA 90 bp | GCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGCCAGCTGTTGGGCCCTaGGAGGATCCATCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AVFTDDTQQGARLLKWEGPAVGP*EDPSQP Trigger: AGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGG...CCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR GCA 90 bp | GATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACCTGGGACGGATCACAATaGCCACGGAGACCCCAACTT | + |
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Preference number: 4 (lower is better) Translates to: DDTQQGARLLKWEGVGYTWDGSQ*PRRPQL Trigger: AAGTTGGGGTCTCCGTGGGCATTGTGATCCGTCCCA...GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR GCA 90 bp | GCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGCAGGCCCAGAGCTCTaGTGCACCCTCTTCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: AVFTDDTQQGARLLKWEGAGPEL*CTLFIS Trigger: GCTGATGAAGAGGGTGCAGCAGAGCTCTGGGCCTGC...CCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | ATACTCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTGAAGACTCTCTACTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILLHQETALPLRDLEDSLLSLAP*KGSPSG Trigger: GCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAG...TAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGAGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR TCA 90 bp | CACACAGTCACATTCCAGTGTGACAAATACTCCTTCACCAGGAGACAGCGCTACGGCAGTCTTCACAGATaGCACCCAACAGGGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: HTVTFQCDKYSFTRRQRYGSLHR*HPTGST Trigger: CGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGCC...GTAGCGCTGTCTCCTGGTGAAGGAGTATTTGTCACACTGGAATGTGACTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR TCA 90 bp | TACTCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTGAAGACTCTCTACACCACTCCGGGATCTTaGAGACTCTCTACAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YSFTRRQRYHSGILKTLYTTPGS*RLSTES Trigger: GCTCTCTGTAGAGAGTCTTCAAGATCCCGGAGTGGT...GTAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR CCA 90 bp | GTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGCACACACTTCCGGTaGCAGGCACTGGTCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: VFTDDTQQGARLLKWEGVGTHFR*QALVIL Trigger: CAGAATGACCAGTGCCTGCCACCGGAAGTGTGTGCC...CACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | TCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTGAAGACTCTCTACAGAACACAGACTCGCCCTTaGAGAGCTCTGCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SFTRRQRYHSGILKTLYRTQTRP*RALLPC Trigger: ACAAGGAAGCAGAGCTCTCCAAGGGCGAGTCTGTGT...TCTGTAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR CCA 90 bp | TTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTCCAGCGGAAGCACGTaGGTTACTTCCGGGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FTDDTQQGARLLKWEGVGSSGST*VTSGRK Trigger: TTTCCTCCCGGAAGTAACCCACGTGCTTCCGCTGGA...CCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525587.1 |
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| CDS-3UTR GCA 90 bp | CAGTCACATTCCAGTGTGACAAATACTCCTTCACCAGGAGACAGCGCTACCACTGGCCTCCTAATCCACTaGCTGGGACGGATCACAATG | + |
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Preference number: 4 (lower is better) Translates to: QSHSSVTNTPSPGDSATTGLLIH*LGRITM Trigger: CATTGTGATCCGTCCCAGGCAGTGGATTAGGAGGCC...AGTGGTAGCGCTGTCTCCTGGTGAAGGAGTATTTGTCACACTGGAATGTGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR GCA 90 bp | GTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGCCCTTGGAGAGCTCTaGTTCCTTGTAGTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VFTDDTQQGARLLKWEGVALGEL*FLVVRR Trigger: CCTCCTCACTACAAGGAAGCAGAGCTCTCCAAGGGC...CACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR GCA 90 bp | GCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGCCCTTGGAGAGCTCTaGTTCCTTGTAGTGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AVFTDDTQQGARLLKWEGALGEL*FLVVRR Trigger: CCTCCTCACTACAAGGAAGCAGAGCTCTCCAAGGGC...CCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACACAGACTCGCCCTTaGAGAGCTCTGCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: TDDTQQGARLLKWEGVGYTQTRP*RALLPC Trigger: ACAAGGAAGCAGAGCTCTCCAAGGGCGAGTCTGTGT...GTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | ACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACTTGCCCATCCGCTCATaGATGTCCAGGTACTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TDDTQQGARLLKWEGVGYLPIRS*MSRYLE Trigger: CTCTAAGTACCTGGACATCCATGAGCGGATGGGCAA...GTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | TTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGGCACGTTTATTAAAGTaGGAAGGGGTGGGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: FTDDTQQGARLLKWEGVGARLLK*EGVGYT Trigger: GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGC...CCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR TCA 90 bp | TCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTGAAGACTCTCTACAGAAGTCACATTCCAGTGTaGCAAATACTCCTTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: SFTRRQRYHSGILKTLYRSHIPV*QILLHQ Trigger: CTGGTGAAGGAGTATTTGTCACACTGGAATGTGACT...TCTGTAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR CCA 90 bp | AGCCTAGGCCTGGCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTATCCGGTGGCAGGCACTaGTCATTCTGTTGTACATAT | + |
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Preference number: 4 (lower is better) Translates to: SLGLAVFTDDTQQGARLLSGGRH*SFCCTY Trigger: ATATGTACAACAGAATGACCAGTGCCTGCCACCGGA...TAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGCCAGGCCTAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR CCA 90 bp | GTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGTTGCCCATCCGCTCATaGATGTCCAGGTACTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: VFTDDTQQGARLLKWEGVLPIRS*MSRYLE Trigger: CTCTAAGTACCTGGACATCCATGAGCGGATGGGCAA...CACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CCA 90 bp | GCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGCACGTTTATTAAAGTaGGAAGGGGTGGGGTACACC | + |
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Preference number: 4 (lower is better) Translates to: AVFTDDTQQGARLLKWEGARLLK*EGVGYT Trigger: GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGC...CCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR GCA 90 bp | GCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGACTCTGTCAACTTTTTaGCCATCCGCTCATGGATGT | + |
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Preference number: 4 (lower is better) Translates to: AVFTDDTQQGARLLKWEGTLSTF*PSAHGC Trigger: ACATCCATGAGCGGATGGGCAAAAAGTTGACAGAGT...CCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS TCA 90 bp | CGGCCATCATCTCCACCTCCAGCTCCGCAGCCAGCTGTTGGGCCCTaGGAGGATCCATCTCAGCCTAGCACCGTGGAAGGGATCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RPSSPPPAPQPAVGP*EDPSQPSTVEGISF Trigger: GAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGGCTGCGGAGCTGGAGGTGGAGATGATGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS CCA 90 bp | AGCCAGCTGTTGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGCCTCCTAATCCACTGCCTGGGACGG | + |
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Preference number: 5 (lower is better) Translates to: SQLLGPERIHLSLAP*KGSPSGLLIHCLGR Trigger: CCGTCCCAGGCAGTGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS CCA 90 bp | AGCCAGCTGTTGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGCCTCCTAATCCTCCCGAGAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SQLLGPERIHLSLAP*KGSPSGLLILPRGS Trigger: GGAGCCTCTCGGGAGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525587.1 |
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| CDS GCA 90 bp | AGAGACACATCGGTCCAGGCACACAGACTCGCCCTTGGAGAGCTCTaGTTCCTTGTAGTGAGGAGGCACACACTTCCGGTGGCAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: RDTSVQAHRLALGEL*FLVVRRHTLPVAGT Trigger: AGTGCCTGCCACCGGAAGTGTGTGCCTCCTCACTACAAGGAAGCAGAGCTCTCCAAGGGCGAGTCTGTGTGCCTGGACCGATGTGTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS CCA 90 bp | AGCCAGCTGTTGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGCCTCCTAATCCTGGGAGCAGACATC | + |
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Preference number: 5 (lower is better) Translates to: SQLLGPERIHLSLAP*KGSPSGLLILGADI Trigger: GATGTCTGCTCCCAGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525158.1 |
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| CDS-3UTR CAA 90 bp | TTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGCACACAGACTCGCCCTaGGAGAGCTCTGCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: FTDDTQQGARLLKWEGVGHTDSP*ESSASL Trigger: CAAGGAAGCAGAGCTCTCCAAGGGCGAGTCTGTGTG...CCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS-3UTR CAA 90 bp | ACAGTCACATTCCAGTGTGACAAATACTCCTTCACCAGGAGACAGCGCTACCACCACACAGACTCGCCCTaGGAGAGCTCTGCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TVTFQCDKYSFTRRQRYHHTDSP*ESSASL Trigger: CAAGGAAGCAGAGCTCTCCAAGGGCGAGTCTGTGTG...GTGGTAGCGCTGTCTCCTGGTGAAGGAGTATTTGTCACACTGGAATGTGACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR CAA 90 bp | TCCTTCACCAGGAGACAGCGCTACCACTCCGGGATCTTGAAGACTCTCTACAGAGCACTGGTCATTCTGTaGTACATATCGGCCATCATC | + |
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Preference number: 5 (lower is better) Translates to: SFTRRQRYHSGILKTLYRALVIL*YISAII Trigger: GATGATGGCCGATATGTACAACAGAATGACCAGTGC...TCTGTAGAGAGTCTTCAAGATCCCGGAGTGGTAGCGCTGTCTCCTGGTGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS-3UTR CAA 90 bp | GATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGTGGGGTACACCAACTCTGTCAACTTTTaGCCCATCCGCTCATGGATG | + |
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Preference number: 5 (lower is better) Translates to: DDTQQGARLLKWEGVGYTNSVNF*PIRSWM Trigger: CATCCATGAGCGGATGGGCAAAAAGTTGACAGAGTT...GGTGTACCCCACCCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS CCA 90 bp | TCATCCTGCATAGACAACTCTGTCAACTTTTTGCCCATCCGCTCATaGATGTCCAGGTACTTAGAGACACATCGGTCCAGGCACACAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSCIDNSVNFLPIRS*MSRYLETHRSRHTD Trigger: GTCTGTGTGCCTGGACCGATGTGTCTCTAAGTACCTGGACATCCATGAGCGGATGGGCAAAAAGTTGACAGAGTTGTCTATGCAGGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTCACAGATGACACCCAACAGGGAGCACGTTTATTAAAGTGGGAAGGGGCACTGGTCATTCTGTaGTACATATCGGCCATCATC | + |
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Preference number: 5 (lower is better) Translates to: AVFTDDTQQGARLLKWEGALVIL*YISAII Trigger: GATGATGGCCGATATGTACAACAGAATGACCAGTGC...CCCTTCCCACTTTAATAAACGTGCTCCCTGTTGGGTGTCATCTGTGAAGACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000257245.9 ENST00000525587.1 |
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| CDS CCA 72 bp | CCATCTCAGCCTAGCACCGTGGAAGGGATCTCCTTCTaGCCTCCTAATCCTCCCGAGAGGCTCCAGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PSQPSTVEGISF*PPNPPERLQRK Trigger: CTTCCGCTGGAGCCTCTCGGGAGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525587.1 |
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| CDS CAA 90 bp | GTACATATCGGCCATCATCTCCACCTCCAGCTCCGCAGCCAGCTGTaGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTGGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VHIGHHLHLQLRSQL*GPERIHLSLAPWKG Trigger: TCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAACAGCTGGCTGCGGAGCTGGAGGTGGAGATGATGGCCGATATGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS GCA 72 bp | TCGGTCCAGGCACACAGACTCGCCCTTGGAGAGCTCTaGTTCCTTGTAGTGAGGAGGCACACACTTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SVQAHRLALGEL*FLVVRRHTLPV Trigger: CACCGGAAGTGTGTGCCTCCTCACTACAAGGAAGCAGAGCTCTCCAAGGGCGAGTCTGTGTGCCTGGACCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS GCA 72 bp | GGGTACACCCCAGGGTGTATACTGACAGGGACCTCATaGAGGCCCAGAGCTCTGCTGCACCCTCTTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: GYTPGCILTGTS*RPRALLHPLHQ Trigger: CTGATGAAGAGGGTGCAGCAGAGCTCTGGGCCTGCATGAGGTCCCTGTCAGTATACACCCTGGGGTGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS CCA 72 bp | CTCCTAATCCTCCCGAGAGGCTCCAGCGGAAGCACGTaGGTTACTTCCGGGAGGAAAGTCCCGCCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLILPRGSSGST*VTSGRKVPPLL Trigger: AAGAAGAGGCGGGACTTTCCTCCCGGAAGTAACCCACGTGCTTCCGCTGGAGCCTCTCGGGAGGATTAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525587.1 |
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| CDS CCA 72 bp | TTGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGCCTCCTAATCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: LGPERIHLSLAP*KGSPSGLLILP Trigger: CGGGAGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525587.1 |
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| CDS CCA 72 bp | TTGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGCCTCCTAATCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: LGPERIHLSLAP*KGSPSGLLIHC Trigger: GCAGTGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS CCA 72 bp | TTGGGCCCTGAGAGGATCCATCTCAGCCTAGCACCGTaGAAGGGATCTCCTTCTGGCCTCCTAATCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LGPERIHLSLAP*KGSPSGLLILG Trigger: TCCCAGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGGATCCTCTCAGGGCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525158.1 |
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| CDS CCA 72 bp | CCATCTCAGCCTAGCACCGTGGAAGGGATCTCCTTCTaGCCTCCTAATCCACTGCCTGGGACGGATCACAAT | + |
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Preference number: 6 (lower is better) Translates to: PSQPSTVEGISF*PPNPLPGTDHN Trigger: ATTGTGATCCGTCCCAGGCAGTGGATTAGGAGGCCAGAAGGAGATCCCTTCCACGGTGCTAGGCTGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257245.9 |
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| CDS CCA 72 bp | ATAGACAACTCTGTCAACTTTTTGCCCATCCGCTCATaGATGTCCAGGTACTTAGAGACACATCGGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IDNSVNFLPIRS*MSRYLETHRSR Trigger: CCTGGACCGATGTGTCTCTAAGTACCTGGACATCCATGAGCGGATGGGCAAAAAGTTGACAGAGTTGTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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| CDS CAA 72 bp | AGCTCTTCATCCTGCATAGACAACTCTGTCAACTTTTaGCCCATCCGCTCATGGATGTCCAGGTACTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSSCIDNSVNF*PIRSWMSRYLE Trigger: CTCTAAGTACCTGGACATCCATGAGCGGATGGGCAAAAAGTTGACAGAGTTGTCTATGCAGGATGAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000257245.9 ENST00000525158.1 ENST00000525587.1 |
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