RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIMELESS (Homo sapiens)

Ensembl gene IDs: ENSG00000111602

Ensembl transcript IDs: ENST00000229201.4, ENST00000553314.1, ENST00000553532.6, ENST00000555808.1, ENST00000557589.1

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGTGGTACAAAACTCCCGCCTGTCATGTCATAAAGCTCCCCATCTaGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACCA +
Preference number: 1 (lower is better)
Translates to: KWYKTPACHVIKLPI*CCDPPPRESQRNRP
Trigger: TGGTCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGACATGACAGGCGGGAGTTTTGTACCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR GCA 90 bp TGGTACAAAACTCCCGCCTGTCATGTCATAAAGCTCCCCATCTGGTaGTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACCAATA +
Preference number: 1 (lower is better)
Translates to: WYKTPACHVIKLPIW*CDPPPRESQRNRPI
Trigger: TATTGGTCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGACATGACAGGCGGGAGTTTTGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR GCA 90 bp TACAAAACTCCCGCCTGTCATGTCATAAAGCTCCCCATCTGGTGCTaGGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACCAATAAAA +
Preference number: 1 (lower is better)
Translates to: YKTPACHVIKLPIWC*DPPPRESQRNRPIK
Trigger: TTTTATTGGTCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGACATGACAGGCGGGAGTTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR TCA 90 bp GTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAACTCTGACTTaGATGCACCATCTAAAAACGTGTCTATCTCTACCCCTAGGCTTC +
Preference number: 1 (lower is better)
Translates to: VRGASGSCMTLPTLT*MHHLKTCLSLPLGF
Trigger: GAAGCCTAGGGGTAGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR TCA 90 bp ACAGGGCAATCCAAATCCATCCTTTACTTAGAAGCCTTCCTGAGCTaGATGGCTATTTTCTCAATCTCACCTTTGCCCTACCTCGGCTGG +
Preference number: 1 (lower is better)
Translates to: TGQSKSILYLEAFLS*MAIFSISPLPYLGW
Trigger: CCAGCCGAGGTAGGGCAAAGGTGAGATTGAGAAAATAGCCATTCAGCTCAGGAAGGCTTCTAAGTAAAGGATGGATTTGGATTGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
3UTR-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACAAGCTCCCCATCTGGTaGTGCGACCCACCTCCAAGA +
Preference number: 2 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNKLPIW*CDPPPR
Trigger: TCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
3UTR-3UTR CCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGTCTCCAGAGAGCTGCTaGGGCATACCGATAAAAACT +
Preference number: 2 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRSPESC*GIPIKT
Trigger: AGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGA...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR GCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACTCCCCATCTGGTGCTaGGACCCACCTCCAAGAGAA +
Preference number: 2 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQLPIWC*DPPPRE
Trigger: TTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGATAAAGCTCCCCATCTaGTGCTGCGACCCACCTCCA +
Preference number: 2 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRIKLPI*CCDPPP
Trigger: TGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTAT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR CAA 90 bp AGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAACTCTGACTaGAATGCACCATCTAAAAACGTGTCTATCTCTACCCCTAGGCTT +
Preference number: 2 (lower is better)
Translates to: SKRSFWVLYDPSNSD*NAPSKNVSISTPRL
Trigger: AAGCCTAGGGGTAGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTAGTAAGAGGAGCTTCTaGGTCCTGTATGACCCTTCC +
Preference number: 2 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGSKRSF*VLYDPS
Trigger: GGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACT...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
3UTR-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTCTCCAGAGAGCTGCTaGGGCATACCGATAAAAACT +
Preference number: 2 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLSPESC*GIPIKT
Trigger: AGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR TCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACTCAGCCTAAATCCGTaGAAGAGCCTGGGATTCTAC +
Preference number: 2 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKLSLNP*KSLGFY
Trigger: GTAGAATCCCAGGCTCTTTCACGGATTTAGGCTGAG...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAATCCGTGAAAGAGCCTaGGATTCTACTGCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQIRERA*DSTALS
Trigger: GGACAGAGCAGTAGAATCCCAGGCTCTTTCACGGAT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTAGGCGCATGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGRRMPP*PANFCI
Trigger: AATACAAAAATTAGCCGGCCATGGTGGCATGCGCCT...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553532.6
3UTR-3UTR TCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGCTTCCAACTCTGACTTaGATGCACCATCTAAAAACG +
Preference number: 2 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLLPTLT*MHHLKT
Trigger: CGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAG...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATCTCCAGAGAGCTaGTGGGGCATACCGATAAAA +
Preference number: 2 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRKSPES*WGIPIK
Trigger: TTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR TCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATACTCAGCCTAAATCCGTaGAAGAGCCTGGGATTCTAC +
Preference number: 2 (lower is better)
Translates to: DISPSQTEMRTSNLTCLILSLNP*KSLGFY
Trigger: GTAGAATCCCAGGCTCTTTCACGGATTTAGGCTGAG...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
3UTR-3UTR GCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCAAATCTCCAGAGAGCTaGTGGGGCATACCGATAAAA +
Preference number: 2 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFKSPES*WGIPIK
Trigger: TTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTT...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR GCA 72 bp CCCGCCTGTCATGTCATAAAGCTCCCCATCTGGTGCTaGGACCCACCTCCAAGAGAAAGCCAAAGGAACAGA +
Preference number: 3 (lower is better)
Translates to: PACHVIKLPIWC*DPPPRESQRNR
Trigger: TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGACATGACAGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR GCA 72 bp ACTCCCGCCTGTCATGTCATAAAGCTCCCCATCTGGTaGTGCGACCCACCTCCAAGAGAAAGCCAAAGGAAC +
Preference number: 3 (lower is better)
Translates to: TPACHVIKLPIW*CDPPPRESQRN
Trigger: GTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGACATGACAGGCGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR CCA 72 bp AAAACTCCCGCCTGTCATGTCATAAAGCTCCCCATCTaGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGG +
Preference number: 3 (lower is better)
Translates to: KTPACHVIKLPI*CCDPPPRESQR
Trigger: CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGACATGACAGGCGGGAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CAA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGCCTTCCAACTCTGACTaGAATGCACCATCTAAAAAC +
Preference number: 3 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRPSNSD*NAPSKN
Trigger: GTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGG...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR TCA 72 bp GCTTCTGGGTCCTGTATGACCCTTCCAACTCTGACTTaGATGCACCATCTAAAAACGTGTCTATCTCTACCC +
Preference number: 3 (lower is better)
Translates to: ASGSCMTLPTLT*MHHLKTCLSLP
Trigger: GGGTAGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATACAGGACCCAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CAA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAACTCACTCCTCTTATTaGCTAAGGAGCTCCAATAAC +
Preference number: 3 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQTHSSY*LRSSNN
Trigger: GTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR-3UTR CAA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACCTTCCAACTCTGACTaGAATGCACCATCTAAAAAC +
Preference number: 3 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQPSNSD*NAPSKN
Trigger: GTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATCCAGGCCGCTGAGGTaGATCGCCCAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRSRPLR*IAQRSW
Trigger: CCAGCTCCTCTGGGCGATTCACCTCAGCGGCCTGGA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGTCCTCTGGGCCCTGCTaGCGGGGAAGTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRSSGPC*RGSGAE
Trigger: CTCTGCTCCACTTCCCCGGCAGCAGGGCCCAGAGGA...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACGCCAGAAGGTTTCCTaGCCAGAGGCAGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRRQKVS*PEAGGR
Trigger: TCGGCCCCCTGCCTCTGGGCAGGAAACCTTCTGGCG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACGAGCCACCGGCCCTCTaGCGCGGGGCCGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNEPPAL*RGAAAF
Trigger: AAAGGCTGCGGCCCCGCGCCAGAGGGCCGGTGGCTC...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATCTGCACTCCGCTCCTaGGCTAAGCGTCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRSALRS*AKRPCP
Trigger: AGGGCAGGGACGCTTAGCTCAGGAGCGGAGTGCAGA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAGCTGCCCTCCGGAGCTaGGTAGGACTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRAALRS*VGLSLA
Trigger: AGCCAAGCTGAGTCCTACCCAGCTCCGGAGGGCAGC...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGGCTGCCCTCCGGAGCTaGGTAGGACTCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRAALRS*VGLSLA
Trigger: AGCCAAGCTGAGTCCTACCCAGCTCCGGAGGGCAGC...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACTCCACTGGCACCTCTaGGGCCGCATCAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRLHWHL*GRIKGN
Trigger: GTTCCCTTTGATGCGGCCTCAGAGGTGCCAGTGGAG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGGAGCCACCGGCCCTCTaGCGCGGGGCCGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLEPPAL*RGAAAF
Trigger: AAAGGCTGCGGCCCCGCGCCAGAGGGCCGGTGGCTC...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAGCTCTCGGGCGGCCTaGCGACGTTTAGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRSSRAA*RRLGTF
Trigger: AAAGGTGCCTAAACGTCGCCAGGCCGCCCGAGAGCT...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACGCCACCAGGCTCAGCTaGACCGGTCCCCGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNATRLS*TGPRLR
Trigger: GCGCAGGCGGGGACCGGTCCAGCTGAGCCTGGTGGC...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAAGGGCAGAACGGCGCTaGATGGACAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPRAERR*MDSSRA
Trigger: CGCCCGAGAGCTGTCCATTCAGCGCCGTTCTGCCCT...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGGGAAGGTACGGACACTaGGGGTCTCAGAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRGRYGH*GSQKPG
Trigger: GCCTGGTTTCTGAGACCCTCAGTGTCCGTACCTTCC...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATACAGCTCCCGAAGATaGGCCTCTTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRYSSRR*ASSSGL
Trigger: GAGCCCCGAAGAAGAGGCTCATCTTCGGGAGCTGTA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGATCGAGAATGCCTGTTaGCTCGCTGGAGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRIENAC*LAGGLE
Trigger: CTCGAGCCCTCCAGCGAGGCAACAGGCATTCTCGAT...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACCGCCAGAAGGTTTCCTaGCCAGAGGCAGGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNRQKVS*PEAGGR
Trigger: TCGGCCCCCTGCCTCTGGGCAGGAAACCTTCTGGCG...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACCAGGGACTTTAGGCTaGAGCTCTGGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRPGTLG*SSGCSF
Trigger: GAAGCTGCAGCCAGAGCTGCAGCCTAAAGTCCCTGG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAAGCTCCCCATCTGGTaGTGCGACCCACCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRKLPIW*CDPPPR
Trigger: TCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGACCAATGGAACGGCCTaGGAGCAGCCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRTNGTA*EQPSSS
Trigger: GGAAGAGGATGGCTGCTCCCAGGCCGTTCCATTGGT...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACCCTACTCCCGCCAGCTaGTCGGGGTTCTGGTCACGA +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNPTPAS*SGFWSR
Trigger: TCGTGACCAGAACCCCGAGCAGCTGGCGGGAGTAGG...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGGACACCTGGACCACTTaGAACTCCTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRDTWTT*NSSSSS
Trigger: GGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGGTGTC...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATTGACTCAAAGAAGCTaGTGCCCTCCGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRLTQRS*CPPELG
Trigger: ACCCAGCTCCGGAGGGCAGCAGCTTCTTTGAGTCAA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAAAGAGAGGCTTGTCCTaGTGGTGCTGGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRKRGLS*WCWVRM
Trigger: CATCCTCACCCAGCACCACCAGGACAAGCCTCTCTT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATGCCTGTTGCCTCGCTaGAGGGCTCGAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRCLLPR*RARVFF
Trigger: AAAGAAGACTCGAGCCCTCCAGCGAGGCAACAGGCA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACTCAGAAACCAGGCCTaGCCGGAAGGAGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPLRNQA*PEGGSS
Trigger: CGAGCTGCCTCCTTCCGGCCAGGCCTGGTTTCTGAG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGTCCATTTTGAGGTCATaGGCCAGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRSILRS*ASRCSI
Trigger: GATGCTGCACCGGCTGGCCCATGACCTCAAAATGGA...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACGGATCAGGCAGTTCTaGAGCCATAGGAGCGGGATA +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRRIRQF*SHRSGI
Trigger: TATCCCGCTCCTATGGCTCCAGAACTGCCTGATCCG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGTCATGGGCCAGCCGGTaGAGCATCTTCACAATGCAA +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRSWASR*SIFTMQ
Trigger: TTGCATTGTGAAGATGCTGCACCGGCTGGCCCATGA...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGTTCCCGATCATCAGCTaGTCGGATCAGGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRFPIIS*SDQAVL
Trigger: CAGAACTGCCTGATCCGAGCAGCTGATGATCGGGAA...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATCCTCATCAGAGCCTTaGTCTCCAGGGACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRSSSEP*SPGTLG
Trigger: GCCTAAAGTCCCTGGAGAGCAAGGCTCTGATGAGGA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATCGTTTCTTGGGTGCTaGCTTCAGCGGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRSFLGC*LQRLFT
Trigger: GGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGGGTCATCCAGGCCGCTaGGGTGAATCGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLGHPGR*GESPRG
Trigger: TCCTCTGGGCGATTCACCTCAGCGGCCTGGATGACC...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACGGTCATCCAGGCCGCTaGGGTGAATCGCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNGHPGR*GESPRG
Trigger: TCCTCTGGGCGATTCACCTCAGCGGCCTGGATGACC...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTCTGCACTCCGCTCCTaGGCTAAGCGTCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLSALRS*AKRPCP
Trigger: AGGGCAGGGACGCTTAGCTCAGGAGCGGAGTGCAGA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAGGAAGGTACGGACACTaGGGGTCTCAGAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPGRYGH*GSQKPG
Trigger: GCCTGGTTTCTGAGACCCTCAGTGTCCGTACCTTCC...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGGGCTCGAACGACAGTTaGACATGCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRGSNDS*TCKAFQ
Trigger: CTGAAACGCTTTGCATGTTCAACTGTCGTTCGAGCC...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAGTAGGGCTTCCATTTTaGGGTCATGGGCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPVGLPF*GHGPAG
Trigger: ACCGGCTGGCCCATGACCTCAAAATGGAAGCCCTAC...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTGGGCTGCCCCCAGCTaGTGCCGCACATCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNWAAPS*CRTSRV
Trigger: GACACGAGATGTGCGGCAGCAGCTGGGGGCAGCCCA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAGCTGGTCATGGGCACTaGCGTCATCATCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRAGHGH*RHHQSS
Trigger: AGAAGATTGATGATGACGCCAGTGCCCATGACCAGC...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCAGAACGGCGCTGAATaGACAGCTCTCGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNQNGAE*TALGRP
Trigger: AGGCCGCCCGAGAGCTGTCCATTCAGCGCCGTTCTG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACTCCTCCCAGCCCAGCTaGAGCAGCTCATACAAGGTT +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNSSQPS*SSSYKV
Trigger: AACCTTGTATGAGCTGCTGCAGCTGGGCTGGGAGGA...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCCTACTCCCGCCAGCTaGTCGGGGTTCTGGTCACGA +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNPTPAS*SGFWSR
Trigger: TCGTGACCAGAACCCCGAGCAGCTGGCGGGAGTAGG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAGGCACCTTTTTCGGCTaGTTTCCCAAATCTGAACTG +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRGTFFG*FPKSEL
Trigger: CAGTTCAGATTTGGGAAAGCAGCCGAAAAAGGTGCC...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATCCTCTGGGCCCTGCTaGCGGGGAAGTGGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSSGPC*RGSGAE
Trigger: CTCTGCTCCACTTCCCCGGCAGCAGGGCCCAGAGGA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTCGCTCTGTAGGATCTaGGCTGCCCCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNSLCRI*AAPSCC
Trigger: GCAGCAGCTGGGGGCAGCCCAGATCCTACAGAGCGA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGATCGCCCAGAGGAGCTaGTCATGGGCACTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLIAQRS*SWALAS
Trigger: TGACGCCAGTGCCCATGACCAGCTCCTCTGGGCGAT...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACAGCTCTCGGGCGGCCTaGCGACGTTTAGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNSSRAA*RRLGTF
Trigger: AAAGGTGCCTAAACGTCGCCAGGCCGCCCGAGAGCT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACCGGATCAGGCAGTTCTaGAGCCATAGGAGCGGGATA +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNRIRQF*SHRSGI
Trigger: TATCCCGCTCCTATGGCTCCAGAACTGCCTGATCCG...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACTTCTGTTCCTCCTCTaGTTGACTCAAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRLLFLL*LTQRSC
Trigger: GCAGCTTCTTTGAGTCAACCAGAGGAGGAACAGAAG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAGCAACCTCTGCCTCCTaGGTTCAGGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPATSAS*VQAILL
Trigger: CAGGAGAATTGCCTGAACCCAGGAGGCAGAGGTTGC...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTCCAGGCCGCTGAGGTaGATCGCCCAGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISSRPLR*IAQRSW
Trigger: CCAGCTCCTCTGGGCGATTCACCTCAGCGGCCTGGA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCTCCACTGGCACCTCTaGGGCCGCATCAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRLHWHL*GRIKGN
Trigger: GTTCCCTTTGATGCGGCCTCAGAGGTGCCAGTGGAG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACAAAGGCTTTTTGGTTaGCTGCAGCCAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRQRLFG*LQPVQK
Trigger: TTTTTGCACTGGCTGCAGTCAACCAAAAAGCCTTTG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTACAGCTCCCGAAGATaGGCCTCTTCTTCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLYSSRR*ASSSGL
Trigger: GAGCCCCGAAGAAGAGGCTCATCTTCGGGAGCTGTA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCATCCTTTGGAAGTCCTTaGCACTGTCAGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPSFGSP*HCQPVP
Trigger: TGGGACTGGCTGACAGTGTCAAGGACTTCCAAAGGA...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTGCAGCTCCAACTCCTaGTCCCCCGTCCACAGTACA +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLCSSNS*SPVHST
Trigger: TGTACTGTGGACGGGGGATCAGGAGTTGGAGCTGCA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACACTATTCGGGCCCGTaGGCGTTTGGCTGTGATATT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPHYSGP*AFGCDI
Trigger: AATATCACAGCCAAACGCTCACGGGCCCGAATAGTG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAGCTGCCCCCAGCTGCTaGCGCACATCTCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKAAPSC*RTSRVS
Trigger: TGAGACACGAGATGTGCGGCAGCAGCTGGGGGCAGC...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCAAGTGCATCCGGCGTaGCCAGGAGGCAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNQVHPA*PGGSFL
Trigger: AAGGAAGCTGCCTCCTGGGCACGCCGGATGCACTTG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACGCTTCCACCACATCCTaGCCTTCCACGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNASTTS*PSTSLL
Trigger: CAATAAGGACGTGGAAGGGCAGGATGTGGTGGAAGC...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGGGCCCTCAGGGCTTGTaGTCGGTGCTCTTTACAGTG +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLGPQGL*SVLFTV
Trigger: CACTGTAAAGAGCACCGAGCACAAGCCCTGAGGGCC...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACGGCCCTCAGGGCTTGTaGTCGGTGCTCTTTACAGTG +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNGPQGL*SVLFTV
Trigger: CACTGTAAAGAGCACCGAGCACAAGCCCTGAGGGCC...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAATCTGTACCAGATGGTaGATGATCTGCTTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRICTRW*MICLRV
Trigger: AACACGCAAGCAGATCATCCACCATCTGGTACAGAT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAGCAATTGTCGTTTCTTaGGTGCTGCCTTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPAIVVS*VLPSAA
Trigger: AGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGC...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACGGCCTTTGTGAAAGATaGGGTCCCTCTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNGLCER*GPSPQW
Trigger: CCATTGGGGAGAGGGACCTCATCTTTCACAAAGGCC...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCAGGGCAGAACGGCGCTaGATGGACAGCTCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFRAERR*MDSSRA
Trigger: CGCCCGAGAGCTGTCCATTCAGCGCCGTTCTGCCCT...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGGGAAGAGCCTCACATTaGGGGCAGAACGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRGRASH*GQNGAE
Trigger: TTCAGCGCCGTTCTGCCCTCAATGTGAGGCTCTTCC...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGGTCTCATCATGCTGCTaGGCTTTCTCCCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLVSSCC*AFSRSR
Trigger: CCTGCTTCGGGAGAAAGCTCAGCAGCATGATGAGAC...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTCCACGGAGTCCATGCTaGGCTCAGAATTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGPRSPC*AQNSGH
Trigger: GTGCCCAGAATTCTGAGCTCAGCATGGACTCCGTGG...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACCGTACCATAGCTTCTaGCCGCTGCTCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQPYHSF*PLLLHW
Trigger: CCAGTGGAGGAGCAGCGGGCAGAAGCTATGGTACGG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACTTGACTCAAAGAAGCTaGTGCCCTCCGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNLTQRS*CPPELG
Trigger: ACCCAGCTCCGGAGGGCAGCAGCTTCTTTGAGTCAA...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCTCCCCATCTGGTGCTaGGACCCACCTCCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNLPIWC*DPPPRE
Trigger: TTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAAAAACAGAGCAAGGCTaGTTGTGTCAAGTTCACCAT +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRKTEQG*LCQVHH
Trigger: ATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAGCTGGTCATGGGCACTaGCGTCATCATCAATCTTCT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPAGHGH*RHHQSS
Trigger: AGAAGATTGATGATGACGCCAGTGCCCATGACCAGC...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCAGAGGAGCTGGTCATaGGCACTGGCGTCATCATCA +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNQRSWS*ALASSS
Trigger: TGATGATGACGCCAGTGCCCATGACCAGCTCCTCTG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAATCGCCCAGAGGAGCTaGTCATGGGCACTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQIAQRS*SWALAS
Trigger: TGACGCCAGTGCCCATGACCAGCTCCTCTGGGCGAT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCCTCAGCAGACGAGCTaGCCAGAAAGAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNPQQTS*PERGAG
Trigger: ACCTGCTCCTCTTTCTGGCCAGCTCGTCTGCTGAGG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAGCCAGGAGACAGTCTTaGATCCGTACCATAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPARRQS*IRTIAS
Trigger: AGAAGCTATGGTACGGATCCAAGACTGTCTCCTGGC...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATCTTCCAGATCTTCCTaGCAAAAATCTTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRSSRSS*QKSFRD
Trigger: GTCCCTGAAAGATTTTTGCCAGGAAGATCTGGAAGA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTGGAGCTCCCAACTCTaGTGCTCTGTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRWSSQL*CSVPAL
Trigger: GAGGGCAGGAACAGAGCACCAGAGTTGGGAGCTCCA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACATAAAGCTCCCCATCTaGTGCTGCGACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNIKLPI*CCDPPP
Trigger: TGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTAT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATGTCTCATCATGCTGCTaGGCTTTCTCCCGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNVSSCC*AFSRSR
Trigger: CCTGCTTCGGGAGAAAGCTCAGCAGCATGATGAGAC...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACCACGGAGTCCATGCTaGGCTCAGAATTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKPRSPC*AQNSGH
Trigger: GTGCCCAGAATTCTGAGCTCAGCATGGACTCCGTGG...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCCTCATTTTCCTCTGTaGGTGGCACCAATGGAACGG +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNPHFPL*VAPMER
Trigger: CCGTTCCATTGGTGCCACTCACAGAGGAAAATGAGG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACTGTTCCTCCTCTGGTTaGCTCAAAGAAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNCSSSG*LKEAAA
Trigger: GGCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACA...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCCCGGTCTCAAACTCCTaGCCTCAGGTGATCCGCCCG +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFPVSNS*PQVIRP
Trigger: CGGGCGGATCACCTGAGGTCAGGAGTTTGAGACCGG...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGCTGCCCCCAGCTGCTaGCGCACATCTCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQAAPSC*RTSRVS
Trigger: TGAGACACGAGATGTGCGGCAGCAGCTGGGGGCAGC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGACATGTAGGCTCCATTaGTCCTCAGCAGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLTCRLH*SSADEL
Trigger: CAGCTCGTCTGCTGAGGAGCAATGGAGCCTACATGT...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGCACAGCACTGTAGCTaGTCAGCCAGGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQAQHCS*SARAGH
Trigger: GTGGCCAGCCCTGGCTGAGCAGCTACAGTGCTGTGC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAGGGGCTCCATGTAGGTaGTCTGCGACTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQGAPCR*SATGRP
Trigger: AGGTCTTCCAGTCGCAGAGCACCTACATGGAGCCCC...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACAGATGGTGGATGATCTaGTTGCGTGTTCGAGGAACA +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNRWWMI*LRVRGT
Trigger: TGTTCCTCGAACACGCAAGCAGATCATCCACCATCT...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACCAGGGACTTTAGGCTaGAGCTCTGGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQPGTLG*SSGCSF
Trigger: GAAGCTGCAGCCAGAGCTGCAGCCTAAAGTCCCTGG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGCGGTGCTCTTTACAGTaGTCCTCATCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLRCSLQ*SSSEPC
Trigger: GCAAGGCTCTGATGAGGAGCACTGTAAAGAGCACCG...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACAGGGCTTGTGCTCGGTaGTCTTTACAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNRACAR*SLQCSS
Trigger: TGAGGAGCACTGTAAAGAGCACCGAGCACAAGCCCT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAGCTCCCAACTCTGGTaGTCTGTTCCTGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRSSQLW*SVPALI
Trigger: GATGAGGGCAGGAACAGAGCACCAGAGTTGGGAGCT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGGTGACCTTAGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRVTLAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCTAAGGTCAC...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCTCGCTCTGTAGGATCTaGGCTGCCCCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFSLCRI*AAPSCC
Trigger: GCAGCAGCTGGGGGCAGCCCAGATCCTACAGAGCGA...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTGCCTGTTGCCTCGCTaGAGGGCTCGAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNCLLPR*RARVFF
Trigger: AAAGAAGACTCGAGCCCTCCAGCGAGGCAACAGGCA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACTCAGAAACCAGGCCTaGCCGGAAGGAGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQLRNQA*PEGGSS
Trigger: CGAGCTGCCTCCTTCCGGCCAGGCCTGGTTTCTGAG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACTCTTTCTCCGACACCTaGACCACTTGCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNSFSDT*TTCNSS
Trigger: GGAGGAGTTGCAAGTGGTCCAGGTGTCGGAGAAAGA...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTCCATTTTGAGGTCATaGGCCAGCCGGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRSILRS*ASRCSI
Trigger: GATGCTGCACCGGCTGGCCCATGACCTCAAAATGGA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATCAGGTGGGCCAAGATaGCTTCCACCACATCCTGCC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSGGPR*LPPHPA
Trigger: GGCAGGATGTGGTGGAAGCCATCTTGGCCCACCTGA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACTTCTGTTCCTCCTCTaGTTGACTCAAAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPLLFLL*LTQRSC
Trigger: GCAGCTTCTTTGAGTCAACCAGAGGAGGAACAGAAG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACCCGCTTTCTTCTTGTaGGCTAGCAAGAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQPAFFL*ASKRAL
Trigger: GAGGGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTTGCCCTACCTCGGCTaGAAGCACAGGAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLLPYLG*KHRKQE
Trigger: TTCTTGCTTCCTGTGCTTCCAGCCGAGGTAGGGCAA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAGGCCTTTGTGAAAGATaGGGTCCCTCTCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQGLCER*GPSPQW
Trigger: CCATTGGGGAGAGGGACCTCATCTTTCACAAAGGCC...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACAAAGGCTTTTTGGTTaGCTGCAGCCAGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPQRLFG*LQPVQK
Trigger: TTTTTGCACTGGCTGCAGTCAACCAAAAAGCCTTTG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTGTACCAGATGGTGGATaGTCTGCTTGCGTGTTCGAG +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGVPDGG*SACVFE
Trigger: CTCGAACACGCAAGCAGATCATCCACCATCTGGTAC...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTCCTTTGGAAGTCCTTaGCACTGTCAGCCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNSFGSP*HCQPVP
Trigger: TGGGACTGGCTGACAGTGTCAAGGACTTCCAAAGGA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACACCCAGGACATCATCTaGGTCCCGGAATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNTQDII*VPEFLK
Trigger: TTTGAGGAATTCCGGGACTCAGATGATGTCCTGGGT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCCTCATTTTCCTCTGTaGGTGGCACCAATGGAACGG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNPHFPL*VAPMER
Trigger: CCGTTCCATTGGTGCCACTCACAGAGGAAAATGAGG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTATCGAGAATGCCTGTTaGCTCGCTGGAGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISIENAC*LAGGLE
Trigger: CTCGAGCCCTCCAGCGAGGCAACAGGCATTCTCGAT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAGGAGGCAGCTTCCTTaGGGTCAGTCAGCATCATCT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRRRQLP*GQSASS
Trigger: AGATGATGCTGACTGACCGCAAGGAAGCTGCCTCCT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTATAGCTTCTGCCCGCTaGTCCTCCACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISIASAR*SSTGTS
Trigger: AGAGGTGCCAGTGGAGGAGCAGCGGGCAGAAGCTAT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTCTCTTCTTCTTCCTCTaGCCCACGTTCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISLFFFL*PTFLWA
Trigger: GGCCCAGAGGAACGTGGGGCAGAGGAAGAAGAAGAG...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTTCCCGATCATCAGCTaGTCGGATCAGGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNFPIIS*SDQAVL
Trigger: CAGAACTGCCTGATCCGAGCAGCTGATGATCGGGAA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAGCCGAACCCCTAGCTTaGGCAACAGCTGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKAEPLA*ATAAET
Trigger: AGTTTCAGCAGCTGTTGCGCAAGCTAGGGGTTCGGC...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTCGTTTCTTGGGTGCTaGCTTCAGCGGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRSFLGC*LQRLFT
Trigger: GGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAAGCTCCCAACTCTGGTaGTCTGTTCCTGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSSQLW*SVPALI
Trigger: GATGAGGGCAGGAACAGAGCACCAGAGTTGGGAGCT...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAAAGAGAGGCTTGTCCTaGTGGTGCTGGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQKRGLS*WCWVRM
Trigger: CATCCTCACCCAGCACCACCAGGACAAGCCTCTCTT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAATCTGCCATCTCTCGCTaGCGCAACACCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQSAISR*RNTSSS
Trigger: AGAACTGGAGGTGTTGCGCCAGCGAGAGATGGCAGA...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGGGTCCCTCTCCCCAATaGATTTCAACCCCTGGACAA +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRGPSPQ*ISTPGQ
Trigger: TTGTCCAGGGGTTGAAATCCATTGGGGAGAGGGACC...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTGGTCCCTCTCCCCAATaGATTTCAACCCCTGGACAA +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGGPSPQ*ISTPGQ
Trigger: TTGTCCAGGGGTTGAAATCCATTGGGGAGAGGGACC...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACATTACCAGAAACAATaGCCTGGTCTAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPHYQKQ*PGLGPS
Trigger: AGAAGGTCCTAGACCAGGCCATTGTTTCTGGTAATG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCTTCCACGTCCTTATTaGCGAGGTACAGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRLPRPY*RGTAPE
Trigger: TTCGGGAGCTGTACCTCGCCAATAAGGACGTGGAAG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATGGAACAGTATTCAGGTaGGCCAAGATGGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNGTVFR*AKMAST
Trigger: GGTGGAAGCCATCTTGGCCCACCTGAATACTGTTCC...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCCCATCTGTACCAGATaGTGGATGATCTGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNPICTR*WMICLR
Trigger: ACGCAAGCAGATCATCCACCATCTGGTACAGATGGG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCATGGGTTCCTTTCCTTTaGAAGTCCTTGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPWVPFL*KSLTLS
Trigger: TGACAGTGTCAAGGACTTCCAAAGGAAAGGAACCCA...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACAGGACTCAGCTTGGCTaGAATTCGCCAGAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNRTQLG*NSPEGF
Trigger: GAAACCTTCTGGCGAATTCCAGCCAAGCTGAGTCCT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACATCCGTGAAAGAGCCTaGGATTCTACTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNIRERA*DSTALS
Trigger: GGACAGAGCAGTAGAATCCCAGGCTCTTTCACGGAT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGGAAGAGCCTCACATTaGGGGCAGAACGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQGRASH*GQNGAE
Trigger: TTCAGCGCCGTTCTGCCCTCAATGTGAGGCTCTTCC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCAGGTGATCCTTTACTaGTCCCATGAGCCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNQVILY*SHEPVV
Trigger: TACAACCGGCTCATGGGATCAGTAAAGGATCACCTG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATGGCTCGAACGACAGTTaGACATGCAAAGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNGSNDS*TCKAFQ
Trigger: CTGAAACGCTTTGCATGTTCAACTGTCGTTCGAGCC...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGTAGGGCTTCCATTTTaGGGTCATGGGCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQVGLPF*GHGPAG
Trigger: ACCGGCTGGCCCATGACCTCAAAATGGAAGCCCTAC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCTCAGCCTAAATCCGTaGAAGAGCCTGGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNLSLNP*KSLGFY
Trigger: GTAGAATCCCAGGCTCTTTCACGGATTTAGGCTGAG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACTCACAGTTCATCATGTaGAAGTCCATACATCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNSQFIM*KSIHQW
Trigger: CCACTGATGTATGGACTTGCACATGATGAACTGTGA...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTCCTCCCAGCCCAGCTaGAGCAGCTCATACAAGGTT +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISSSQPS*SSSYKV
Trigger: AACCTTGTATGAGCTGCTGCAGCTGGGCTGGGAGGA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGGGCACCTTTTTCGGCTaGTTTCCCAAATCTGAACTG +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLGTFFG*FPKSEL
Trigger: CAGTTCAGATTTGGGAAAGCAGCCGAAAAAGGTGCC...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCATCTCATTCACTGTTaGCAGCAGCTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRHLIHC*QQLLIG
Trigger: GCCTATCAGGAGCTGCTGGCAACAGTGAATGAGATG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTCATCTCATTCACTGTTaGCAGCAGCTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGHLIHC*QQLLIG
Trigger: GCCTATCAGGAGCTGCTGGCAACAGTGAATGAGATG...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATAGCACAGCACTGTAGCTaGTCAGCCAGGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIAQHCS*SARAGH
Trigger: GTGGCCAGCCCTGGCTGAGCAGCTACAGTGCTGTGC...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAATAGCTTCTGCCCGCTaGTCCTCCACTGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQIASAR*SSTGTS
Trigger: AGAGGTGCCAGTGGAGGAGCAGCGGGCAGAAGCTAT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCCTCTTCTTCTTCCTCTaGCCCACGTTCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFLFFFL*PTFLWA
Trigger: GGCCCAGAGGAACGTGGGGCAGAGGAAGAAGAAGAG...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGGGGCTCCATGTAGGTaGTCTGCGACTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQGAPCR*SATGRP
Trigger: AGGTCTTCCAGTCGCAGAGCACCTACATGGAGCCCC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAGCTTCCACCACATCCTaGCCTTCCACGTCCTTATTG +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKASTTS*PSTSLL
Trigger: CAATAAGGACGTGGAAGGGCAGGATGTGGTGGAAGC...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTGCCGAACCCCTAGCTTaGGCAACAGCTGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISAEPLA*ATAAET
Trigger: AGTTTCAGCAGCTGTTGCGCAAGCTAGGGGTTCGGC...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAAGGGCTTGTGCTCGGTaGTCTTTACAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQRACAR*SLQCSS
Trigger: TGAGGAGCACTGTAAAGAGCACCGAGCACAAGCCCT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTTGTCGTTTCTTGGGTaGTGCCTTCAGCGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRLSFLG*CLQRLF
Trigger: AAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAAGCTCCCCATCTGGTaGTGCGACCCACCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQKLPIW*CDPPPR
Trigger: TCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATAGGTTTGAGCCACTGTaGCGGTCTGTTGGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNRFEPL*RSVGLF
Trigger: AAAGAGACCAACAGACCGGCACAGTGGCTCAAACCT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACTGATCAAGGTCAGCTaGGACATGGAGAATATTTCT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPLIKVS*DMENIS
Trigger: AGAAATATTCTCCATGTCCCAGCTGACCTTGATCAG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACCTCAGCAGACGAGCTaGCCAGAAAGAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQPQQTS*PERGAG
Trigger: ACCTGCTCCTCTTTCTGGCCAGCTCGTCTGCTGAGG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAAGCTGCTCGGGGTTCTaGTCACGAAACATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQSCSGF*SRNIRE
Trigger: CTCCCTTATGTTTCGTGACCAGAACCCCGAGCAGCT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAAGCTGCTCGGGGTTCTaGTCACGAAACATAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSCSGF*SRNIRE
Trigger: CTCCCTTATGTTTCGTGACCAGAACCCCGAGCAGCT...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGAGGAAAGAGCGGGGCTaGCATCTCTCATCAAACTTT +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLRKERG*HLSSNF
Trigger: AAAGTTTGATGAGAGATGCCAGCCCCGCTCTTTCCT...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATAGCCTCCACTTCTTCTaGGCTAGATGGGACATTACC +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNSLHFF*ARWDIT
Trigger: GGTAATGTCCCATCTAGCCCAGAAGAAGTGGAGGCT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCATGCCCAGGATGTATTTaGCAAAAGTCACTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPCPGCI*QKSLAL
Trigger: AAGAGCTAGTGACTTTTGCCAAATACATCCTGGGCA...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATCAGGTGGGCCAAGATaGCTTCCACCACATCCTGCC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSGGPR*LPPHPA
Trigger: GGCAGGATGTGGTGGAAGCCATCTTGGCCCACCTGA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAACCAATGGAACGGCCTaGGAGCAGCCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQTNGTA*EQPSSS
Trigger: GGAAGAGGATGGCTGCTCCCAGGCCGTTCCATTGGT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGATTTTCCTCTGTGAGTaGCACCAATGGAACGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRIFLCE*HQWNGL
Trigger: CAGGCCGTTCCATTGGTGCCACTCACAGAGGAAAAT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACCCGCTTTCTTCTTGTaGGCTAGCAAGAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQPAFFL*ASKRAL
Trigger: GAGGGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATGGAGCTCCCAACTCTaGTGCTCTGTTCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQWSSQL*CSVPAL
Trigger: GAGGGCAGGAACAGAGCACCAGAGTTGGGAGCTCCA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCTTCTTTTGGATTCCTaGAGCTCCCAACTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRLLLDS*SSQLWC
Trigger: GCACCAGAGTTGGGAGCTCCAGGAATCCAAAAGAAG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAGTAAGAGGAGCTTCTaGGTCCTGTATGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRSKRSF*VLYDPS
Trigger: GGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTATCCGTGAAAGAGCCTaGGATTCTACTGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGIRERA*DSTALS
Trigger: GGACAGAGCAGTAGAATCCCAGGCTCTTTCACGGAT...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTATAAAGCTCCCCATCTaGTGCTGCGACCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISIKLPI*CCDPPP
Trigger: TGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTAT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCATACAAGGTTTCACTaGGGACTCCAAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNHTRFH*GLQKPS
Trigger: AGAAGGCTTTTGGAGTCCTCAGTGAAACCTTGTATG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCCTTTACTGATCCCATaGGCCGGTTGTAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRPLLIP*AGCNSS
Trigger: AGAACTGTTACAACCGGCTCATGGGATCAGTAAAGG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTCCTTTACTGATCCCATaGGCCGGTTGTAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGPLLIP*AGCNSS
Trigger: AGAACTGTTACAACCGGCTCATGGGATCAGTAAAGG...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACAGGTGATCCTTTACTaGTCCCATGAGCCGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQQVILY*SHEPVV
Trigger: TACAACCGGCTCATGGGATCAGTAAAGGATCACCTG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCAGAAGACTGACAGCTaGAAAAGTAGGGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNQKTDS*KSRASI
Trigger: AATGGAAGCCCTACTTTTTCAGCTGTCAGTCTTCTG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAACCCAGGACATCATCTaGGTCCCGGAATTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQTQDII*VPEFLK
Trigger: TTTGAGGAATTCCGGGACTCAGATGATGTCCTGGGT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTTGCGCAACAGCTGCTaGAACTGTTCGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNLRNSC*NCSFSM
Trigger: CATGGAAAACGAACAGTTTCAGCAGCTGTTGCGCAA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTGTTCCTCCTCTGGTTaGCTCAAAGAAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISCSSSG*LKEAAA
Trigger: GGCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATACAAGTGCATCCGGCGTaGCCAGGAGGCAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIQVHPA*PGGSFL
Trigger: AAGGAAGCTGCCTCCTGGGCACGCCGGATGCACTTG...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTTCTTTTGTTTGTTCTaGACCACCAGGTTCCCACGG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNFFCLF*TTRFPR
Trigger: CCGTGGGAACCTGGTGGTGCAGAACAAACAAAAGAA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGACACCTGGACCACTTaGAACTCCTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQDTWTT*NSSSSS
Trigger: GGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGGTGTC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATAGATGGTGGATGATCTaGTTGCGTGTTCGAGGAACA +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNRWWMI*LRVRGT
Trigger: TGTTCCTCGAACACGCAAGCAGATCATCCACCATCT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACGATGCCAACTTTTTCTaGCGTTTCTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNDANFF*RFLYSS
Trigger: GGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATC...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATTGTCGTTTCTTGGGTaGTGCCTTCAGCGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKLSFLG*CLQRLF
Trigger: AAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGAAATCTCCAGAGAGCTaGTGGGGCATACCGATAAAA +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLKSPES*WGIPIK
Trigger: TTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTT...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGGGATTACAGGCGCATaGCACCATGGCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQGITGA*HHGRLI
Trigger: AATTAGCCGGCCATGGTGGCATGCGCCTGTAATCCC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTCTTTTCTATGCCCCATaGCAACAAGCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGLFYAP*QQAGFS
Trigger: AGAGAAGCCAGCTTGTTGGCATGGGGCATAGAAAAG...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTTTTGTCCTTTTCTATaGCCCATGCCAACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLFCPFL*PMPTSW
Trigger: CCAGCTTGTTGGCATGGGGCATAGAAAAGGACAAAA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCAAAAGCCTTCTCACTaGCAAAGGCCTCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRQKPSH*QRPLCR
Trigger: CCTACAAAGAGGCCTTTGCCAGTGAGAAGGCTTTTG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATAGGTCAGCTGGGACATaGAGAATATTTCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNRSAGT*RIFLTS
Trigger: GCTGGTCAGAAATATTCTCCATGTCCCAGCTGACCT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCCAGAGGAGCTGGTCATaGGCACTGGCGTCATCATCA +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFQRSWS*ALASSS
Trigger: TGATGATGACGCCAGTGCCCATGACCAGCTCCTCTG...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTTTCTGCTCAATGAAGTaGAAGGTACGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGFCSMK*KVRTLR
Trigger: CCTCAGTGTCCGTACCTTCCACTTCATTGAGCAGAA...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCCTCACAGCCTCATCTaGAGATATGTCCATCTCATT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNPHSLI*RYVHLI
Trigger: AATGAGATGGACATATCTCCAGATGAGGCTGTGAGG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCCAGAAACAATGGCCTaGTCTAGGACCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRPETMA*SRTFFF
Trigger: GAAGAAGAAGGTCCTAGACCAGGCCATTGTTTCTGG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAAGCCTCCACTTCTTCTaGGCTAGATGGGACATTACC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSLHFF*ARWDIT
Trigger: GGTAATGTCCCATCTAGCCCAGAAGAAGTGGAGGCT...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCAATCTTCACAATGCAATaGTTAGTGTGGGCACTATTC +
Preference number: 4 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPIFTMQ*LVWALF
Trigger: GAATAGTGCCCACACTAACCATTGCATTGTGAAGAT...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTGGAACAGTATTCAGGTaGGCCAAGATGGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISGTVFR*AKMAST
Trigger: GGTGGAAGCCATCTTGGCCCACCTGAATACTGTTCC...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATAGGACTAAGCTACCCTaGACTTGTTCTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNRTKLP*TCSASE
Trigger: CTCAGAAGCAGAACAAGTCCAGGGTAGCTTAGTCCT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAATTTTCCTCTGTGAGTaGCACCAATGGAACGGCCTG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQIFLCE*HQWNGL
Trigger: CAGGCCGTTCCATTGGTGCCACTCACAGAGGAAAAT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
3UTR CAA 72 bp AGCTTCTGGGTCCTGTATGACCCTTCCAACTCTGACTaGAATGCACCATCTAAAAACGTGTCTATCTCTACC +
Preference number: 4 (lower is better)
Translates to: SFWVLYDPSNSD*NAPSKNVSIST
Trigger: GGTAGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATACAGGACCCAGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCATGGAGAATATTTCTaGCCAGCAGTAGGATCCGTT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNHGEYF*PAVGSV
Trigger: AACGGATCCTACTGCTGGTCAGAAATATTCTCCATG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTCATGGAGAATATTTCTaGCCAGCAGTAGGATCCGTT +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGHGEYF*PAVGSV
Trigger: AACGGATCCTACTGCTGGTCAGAAATATTCTCCATG...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTATCGCTCCAACATTTTaGGGAAGAGGTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISIAPTF*GRGGWS
Trigger: AGACCACCCACCTCTTCCTCAAAATGTTGGAGCGAT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCAGAAGACTGACAGCTaGAAAAGTAGGGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRQKTDS*KSRASI
Trigger: AATGGAAGCCCTACTTTTTCAGCTGTCAGTCTTCTG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCGTACCAGATGGTGGATaGTCTGCTTGCGTGTTCGAG +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFVPDGG*SACVFE
Trigger: CTCGAACACGCAAGCAGATCATCCACCATCTGGTAC...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACACTATTCGGGCCCGTaGGCGTTTGGCTGTGATATT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQHYSGP*AFGCDI
Trigger: AATATCACAGCCAAACGCTCACGGGCCCGAATAGTG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAATTGCGCAACAGCTGCTaGAACTGTTCGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQLRNSC*NCSFSM
Trigger: CATGGAAAACGAACAGTTTCAGCAGCTGTTGCGCAA...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCACATGTAGGCTCCATTaGTCCTCAGCAGACGAGCTG +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFTCRLH*SSADEL
Trigger: CAGCTCGTCTGCTGAGGAGCAATGGAGCCTACATGT...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCAGGAGGCAGCTTCCTTaGGGTCAGTCAGCATCATCT +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFRRQLP*GQSASS
Trigger: AGATGATGCTGACTGACCGCAAGGAAGCTGCCTCCT...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCTCATGGGCCAGCCGGTaGAGCATCTTCACAATGCAA +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFSWASR*SIFTMQ
Trigger: TTGCATTGTGAAGATGCTGCACCGGCTGGCCCATGA...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATTGGCAAGATGGAGGATaGCAACTTTTTCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNWQDGG*QLFLPF
Trigger: AAACGGCAGAAAAAGTTGGCATCCTCCATCTTGCCA...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATCCTCATCAGAGCCTTaGTCTCCAGGGACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSSSEP*SPGTLG
Trigger: GCCTAAAGTCCCTGGAGAGCAAGGCTCTGATGAGGA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACGGTGCTCTTTACAGTaGTCCTCATCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQRCSLQ*SSSEPC
Trigger: GCAAGGCTCTGATGAGGAGCACTGTAAAGAGCACCG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCAACCCTATCTCAAATaGAGGAATGGGCCTCTATCT +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNQPYLK*RNGPLS
Trigger: AGATAGAGGCCCATTCCTGCATTTGAGATAGGGTTG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATCTCAATCTCACCTTTaGCCTACCTCGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSQSHL*PTSAGS
Trigger: GCTTCCAGCCGAGGTAGGGCAAAGGTGAGATTGAGA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAGTCCATACATCAGTaGACCAACCAACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRKSIHQ*TNQQRR
Trigger: CCTTCTCTGTTGGTTGGTCCACTGATGTATGGACTT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCAAGGGCACTACATGTaGCTAGAAGTTCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNQGHYM*LEVHSS
Trigger: TGAACTGTGAACTTCTAGCCACATGTAGTGCCCTTG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACAAAACAGAGCAAGGCTaGTTGTGTCAAGTTCACCAT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNKTEQG*LCQVHH
Trigger: ATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTT...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AGAACTAAATCTCCAGAGAGCTGCTGGGGCATACCGATAAAAACTGGGAGAAACCTGATCAAGGTCAGCTaGGACATGGAGAATATTTCT +
Preference number: 4 (lower is better)
Translates to: RTKSPESCWGIPIKTGRNLIKVS*DMENIS
Trigger: AGAAATATTCTCCATGTCCCAGCTGACCTTGATCAG...GTTTCTCCCAGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTTAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATTCTGCTCAATGAAGTaGAAGGTACGGACACTGAGG +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKFCSMK*KVRTLR
Trigger: CCTCAGTGTCCGTACCTTCCACTTCATTGAGCAGAA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTCCTCACAGCCTCATCTaGAGATATGTCCATCTCATT +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGPHSLI*RYVHLI
Trigger: AATGAGATGGACATATCTCCAGATGAGGCTGTGAGG...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAAGGAAAGAGCGGGGCTaGCATCTCTCATCAAACTTT +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKRKERG*HLSSNF
Trigger: AAAGTTTGATGAGAGATGCCAGCCCCGCTCTTTCCT...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTATTTTGAGGAAGAGGTaGGTGGTCTCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISILRKR*VVSTRS
Trigger: TGACCTGGTGGAGACCACCCACCTCTTCCTCAAAAT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCTCTTTCTCCGACACCTaGACCACTTGCAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFSFSDT*TTCNSS
Trigger: GGAGGAGTTGCAAGTGGTCCAGGTGTCGGAGAAAGA...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACTTCCACGTCCTTATTaGCGAGGTACAGCTCCCGAA +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQLPRPY*RGTAPE
Trigger: TTCGGGAGCTGTACCTCGCCAATAAGGACGTGGAAG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGATCTGTACCAGATGGTaGATGATCTGCTTGCGTGTT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRICTRW*MICLRV
Trigger: AACACGCAAGCAGATCATCCACCATCTGGTACAGAT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTGGGTTCCTTTCCTTTaGAAGTCCTTGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRWVPFL*KSLTLS
Trigger: TGACAGTGTCAAGGACTTCCAAAGGAAAGGAACCCA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCGGACTCCGCTCCATTTaGCAAGATGGAGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFGLRSI*QDGGCQ
Trigger: TTGGCATCCTCCATCTTGCCAAATGGAGCGGAGTCC...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCGCAATTGTCGTTTCTTaGGTGCTGCCTTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFAIVVS*VLPSAA
Trigger: AGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGC...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGACTGTGCCGGTCTGTTaGTCTCTTTTTACCCTAAAA +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLTVPVC*SLFTLK
Trigger: TTTTAGGGTAAAAAGAGACCAACAGACCGGCACAGT...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAAGGCGCATGCCACCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQRRMPP*PANFCI
Trigger: AATACAAAAATTAGCCGGCCATGGTGGCATGCGCCT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR TCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCATCGCTCCAACATTTTaGGGAAGAGGTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFIAPTF*GRGGWS
Trigger: AGACCACCCACCTCTTCCTCAAAATGTTGGAGCGAT...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAATCTGGAGAAATGTCTTaGGAGCCAAACACATCTCCT +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQSGEMS*EPNTSP
Trigger: AGGAGATGTGTTTGGCTCTCAAGACATTTCTCCAGA...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCTTCCAACTCTGACTTaGATGCACCATCTAAAAACG +
Preference number: 4 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNLPTLT*MHHLKT
Trigger: CGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACAACACCTCCAGTTCTaGAAAATCTGCACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQQHLQF*KICTPL
Trigger: GAGCGGAGTGCAGATTTTGCAGAACTGGAGGTGTTG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCCAACACCTCCAGTTCTaGAAAATCTGCACTCCGCTC +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFQHLQF*KICTPL
Trigger: GAGCGGAGTGCAGATTTTGCAGAACTGGAGGTGTTG...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAGATGCCAACTTTTTCTaGCGTTTCTTGTACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKDANFF*RFLYSS
Trigger: GGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATC...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTCAAAAGCCTTCTCACTaGCAAAGGCCTCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISQKPSH*QRPLCR
Trigger: CCTACAAAGAGGCCTTTGCCAGTGAGAAGGCTTTTG...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTAGGTCAGCTGGGACATaGAGAATATTTCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISRSAGT*RIFLTS
Trigger: GCTGGTCAGAAATATTCTCCATGTCCCAGCTGACCT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATATCTGCCATCTCTCGCTaGCGCAACACCTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLISAISR*RNTSSS
Trigger: AGAACTGGAGGTGTTGCGCCAGCGAGAGATGGCAGA...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTTCTTCTGGGCTAGATaGGACATTACCAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLFFWAR*DITRNN
Trigger: ATTGTTTCTGGTAATGTCCCATCTAGCCCAGAAGAA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTGCCCAGGATGTATTTaGCAAAAGTCACTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRCPGCI*QKSLAL
Trigger: AAGAGCTAGTGACTTTTGCCAAATACATCCTGGGCA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTCCACAAAGGCTTTTTaGTTGACTGCAGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISSTKAF*LTAASA
Trigger: TGCACTGGCTGCAGTCAACCAAAAAGCCTTTGTGGA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACCCATCTGTACCAGATaGTGGATGATCTGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQPICTR*WMICLR
Trigger: ACGCAAGCAGATCATCCACCATCTGGTACAGATGGG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAGTAAGAGGAGCTTCTaGGTCCTGTATGACCCTTCC +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSKRSF*VLYDPS
Trigger: GGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGGAATGGGCCTCTATCTaGTATCTAGAGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: LSQMQEWASIWYLEDDHREWASI*YLEDDH
Trigger: ATGATCATCCTCTAGATACCAGATAGAGGCCCATTC...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTCTGGAGAAATGTCTTaGGAGCCAAACACATCTCCT +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISSGEMS*EPNTSP
Trigger: AGGAGATGTGTTTGGCTCTCAAGACATTTCTCCAGA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACTTCCAACTCTGACTTaGATGCACCATCTAAAAACG +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQLPTLT*MHHLKT
Trigger: CGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTAAATCTCCAGAGAGCTaGTGGGGCATACCGATAAAA +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISKSPES*WGIPIK
Trigger: TTTTATCGGTATGCCCCAGCAGCTCTCTGGAGATTT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTAAGTCCATACATCAGTaGACCAACCAACAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISKSIHQ*TNQQRR
Trigger: CCTTCTCTGTTGGTTGGTCCACTGATGTATGGACTT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCCCAGAAACAATGGCCTaGTCTAGGACCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFPETMA*SRTFFF
Trigger: GAAGAAGAAGGTCCTAGACCAGGCCATTGTTTCTGG...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTTTCTTCTGGGCTAGATaGGACATTACCAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGFFWAR*DITRNN
Trigger: ATTGTTTCTGGTAATGTCCCATCTAGCCCAGAAGAA...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATAGGACTCCGCTCCATTTaGCAAGATGGAGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIGLRSI*QDGGCQ
Trigger: TTGGCATCCTCCATCTTGCCAAATGGAGCGGAGTCC...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATCTTCCAGATCTTCCTaGCAAAAATCTTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSSRSS*QKSFRD
Trigger: GTCCCTGAAAGATTTTTGCCAGGAAGATCTGGAAGA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAGGACTAAGCTACCCTaGACTTGTTCTGCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQRTKLP*TCSASE
Trigger: CTCAGAAGCAGAACAAGTCCAGGGTAGCTTAGTCCT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATATCGTTTCTTCTTTTaGATTCCTGGAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKYRFFF*IPGAPN
Trigger: GTTGGGAGCTCCAGGAATCCAAAAGAAGAAACGATA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTCATCATCCTCAATCTaGTATCGTTTCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLSSSSI*YRFFFW
Trigger: CCAAAAGAAGAAACGATACCAGATTGAGGATGATGA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCTCTCCAGAGAGCTGCTaGGGCATACCGATAAAAACT +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFSPESC*GIPIKT
Trigger: AGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGA...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATCTCCAGAGAGCTGCTaGGGCATACCGATAAAAACT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSPESC*GIPIKT
Trigger: AGTTTTTATCGGTATGCCCCAGCAGCTCTCTGGAGA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAGAGGACAGAGGCATCTaGTATCTTCTAAAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQEDRGI*YLLKVV
Trigger: TACCACTTTTAGAAGATACCAGATGCCTCTGTCCTC...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR TCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAGGAAGCAAGAAAGCTaGCGTTTCCAAGAATGGGTA +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQRKQES*RFQEWV
Trigger: TACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATGGCAAGATGGAGGATaGCAACTTTTTCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQWQDGG*QLFLPF
Trigger: AAACGGCAGAAAAAGTTGGCATCCTCCATCTTGCCA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATAATTTTGAGGAAGAGGTaGGTGGTCTCCACCAGGTCA +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIILRKR*VVSTRS
Trigger: TGACCTGGTGGAGACCACCCACCTCTTCCTCAAAAT...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACATTACCAGAAACAATaGCCTGGTCTAGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQHYQKQ*PGLGPS
Trigger: AGAAGGTCCTAGACCAGGCCATTGTTTCTGGTAATG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAATTTGTTTCAGCAACTaGATCTCTTCCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQICFSN*ISSSGE
Trigger: TTCTCCAGAGGAAGAGATCCAGTTGCTGAAACAAAT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAATTTGTTTCAGCAACTaGATCTCTTCCTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKICFSN*ISSSGE
Trigger: TTCTCCAGAGGAAGAGATCCAGTTGCTGAAACAAAT...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATACTTCTTTTGGATTCCTaGAGCTCCCAACTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLILLLDS*SSQLWC
Trigger: GCACCAGAGTTGGGAGCTCCAGGAATCCAAAAGAAG...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTATCGTTTCTTCTTTTaGATTCCTGGAGCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISYRFFF*IPGAPN
Trigger: GTTGGGAGCTCCAGGAATCCAAAAGAAGAAACGATA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATCACAGTTCATCATGTaGAAGTCCATACATCAGTGG +
Preference number: 4 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSQFIM*KSIHQW
Trigger: CCACTGATGTATGGACTTGCACATGATGAACTGTGA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR GCA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATATTCTTTTGTTTGTTCTaGACCACCAGGTTCCCACGG +
Preference number: 4 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIFFCLF*TTRFPR
Trigger: CCGTGGGAACCTGGTGGTGCAGAACAAACAAAAGAA...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CCA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATCATCATCCTCAATCTaGTATCGTTTCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKSSSSI*YRFFFW
Trigger: CCAAAAGAAGAAACGATACCAGATTGAGGATGATGA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCGAGGACAGAGGCATCTaGTATCTTCTAAAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFEDRGI*YLLKVV
Trigger: TACCACTTTTAGAAGATACCAGATGCCTCTGTCCTC...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CCA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCGAATGGGCCTCTATCTaGTATCTAGAGGATGATCAT +
Preference number: 4 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFEWASI*YLEDDH
Trigger: ATGATCATCCTCTAGATACCAGATAGAGGCCCATTC...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp CGCTGGCGCAACACCTCCAGTTCTGCAAAATCTGCACTCCGCTCCTaGGCTAAGCGTCCCTGCCCTACTCCCGCCAGCTGCTCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: RWRNTSSSAKSALRS*AKRPCPTPASCSGF
Trigger: GAACCCCGAGCAGCTGGCGGGAGTAGGGCAGGGACGCTTAGCTCAGGAGCGGAGTGCAGATTTTGCAGAACTGGAGGTGTTGCGCCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp CACACCTCCCGAGCAGACCTCAGGAGAGTCAGGGCCTGTGGGGCCTaGCCAGCCAGGAGACAGTCTTGGATCCGTACCATAGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HTSRADLRRVRACGA*PARRQSWIRTIASA
Trigger: GGCAGAAGCTATGGTACGGATCCAAGACTGTCTCCTGGCTGGCCAGGCCCCACAGGCCCTGACTCTCCTGAGGTCTGCTCGGGAGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp TTCAGGCCACACCTCCCGAGCAGACCTCAGGAGAGTCAGGGCCTGTaGGGCCTGGCCAGCCAGGAGACAGTCTTGGATCCGTACCATAGC +
Preference number: 5 (lower is better)
Translates to: FRPHLPSRPQESQGL*GLASQETVLDPYHS
Trigger: GCTATGGTACGGATCCAAGACTGTCTCCTGGCTGGCCAGGCCCCACAGGCCCTGACTCTCCTGAGGTCTGCTCGGGAGGTGTGGCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp CCAGCCAGGAGACAGTCTTGGATCCGTACCATAGCTTCTGCCCGCTaGTCCTCCACTGGCACCTCTGAGGCCGCATCAAAGGGAACCACG +
Preference number: 5 (lower is better)
Translates to: PARRQSWIRTIASAR*SSTGTSEAASKGTT
Trigger: CGTGGTTCCCTTTGATGCGGCCTCAGAGGTGCCAGTGGAGGAGCAGCGGGCAGAAGCTATGGTACGGATCCAAGACTGTCTCCTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp TTGCAACTCCTCCTCTTCCTCCTCCTCCTCCTCTTCTTCTTCCTCTaGCCCACGTTCCTCTGGGCCCTGCTGCCGGGGAAGTGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: LQLLLFLLLLLFFFL*PTFLWALLPGKWSR
Trigger: TCTGCTCCACTTCCCCGGCAGCAGGGCCCAGAGGAACGTGGGGCAGAGGAAGAAGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGTTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS TCA 90 bp GATCCGTACCATAGCTTCTGCCCGCTGCTCCTCCACTGGCACCTCTaGGGCCGCATCAAAGGGAACCACGGAGTCCATGCTGAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: DPYHSFCPLLLHWHL*GRIKGNHGVHAELR
Trigger: TCTGAGCTCAGCATGGACTCCGTGGTTCCCTTTGATGCGGCCTCAGAGGTGCCAGTGGAGGAGCAGCGGGCAGAAGCTATGGTACGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp ACAGCGTCTTCCTCCTCTGGGGATGCCAGGCCCGCTTTCTTCTTGTaGGCTAGCAAGAGGGCCCTCAGGGCTTGTGCTCGGTGCTCTTTA +
Preference number: 5 (lower is better)
Translates to: TASSSSGDARPAFFL*ASKRALRACARCSL
Trigger: TAAAGAGCACCGAGCACAAGCCCTGAGGGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGGCCTGGCATCCCCAGAGGAGGAAGACGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS TCA 90 bp CAGAAGTCTCTGAGGAAGAGCCTCACATTGAGGGCAGAACGGCGCTaGATGGACAGCTCTCGGGCGGCCTGGCGACGTTTAGGCACCTTT +
Preference number: 5 (lower is better)
Translates to: QKSLRKSLTLRAERR*MDSSRAAWRRLGTF
Trigger: AAAGGTGCCTAAACGTCGCCAGGCCGCCCGAGAGCTGTCCATTCAGCGCCGTTCTGCCCTCAATGTGAGGCTCTTCCTCAGAGACTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp GCACCACCAGGTTCCCACGGCTCCGACAGAATCGCTCCAACATTTTaGGGAAGAGGTGGGTGGTCTCCACCAGGTCACGAAGGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: APPGSHGSDRIAPTF*GRGGWSPPGHEGKS
Trigger: GCTCTTTCCTTCGTGACCTGGTGGAGACCACCCACCTCTTCCTCAAAATGTTGGAGCGATTCTGTCGGAGCCGTGGGAACCTGGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp TCCTGCCCTTCCACGTCCTTATTGGCGAGGTACAGCTCCCGAAGATaGGCCTCTTCTTCGGGGCTCCATGTAGGTGCTCTGCGACTGGAA +
Preference number: 5 (lower is better)
Translates to: SCPSTSLLARYSSRR*ASSSGLHVGALRLE
Trigger: TTCCAGTCGCAGAGCACCTACATGGAGCCCCGAAGAAGAGGCTCATCTTCGGGAGCTGTACCTCGCCAATAAGGACGTGGAAGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS GCA 90 bp AGGGACTCCGCTCCATTTGGCAAGATGGAGGATGCCAACTTTTTCTaGCGTTTCTTGTACAGCTCCCGCCGCTCAGCCACCAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: RDSAPFGKMEDANFF*RFLYSSRRSATSPR
Trigger: TCTGGGGCTGGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGCCAAATGGAGCGGAGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp TGGCTGCAGCTTCTGTTCCTCCTCTGGTTGACTCAAAGAAGCTGCTaGCCTCCGGAGCTGGGTAGGACTCAGCTTGGCTGGAATTCGCCA +
Preference number: 5 (lower is better)
Translates to: WLQLLFLLWLTQRSC*PPELGRTQLGWNSP
Trigger: TGGCGAATTCCAGCCAAGCTGAGTCCTACCCAGCTCCGGAGGGCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACAGAAGCTGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 90 bp CTCTGGCTGCAGCTTCTGTTCCTCCTCTGGTTGACTCAAAGAAGCTaGTGCCCTCCGGAGCTGGGTAGGACTCAGCTTGGCTGGAATTCG +
Preference number: 5 (lower is better)
Translates to: LWLQLLFLLWLTQRS*CPPELGRTQLGWNS
Trigger: CGAATTCCAGCCAAGCTGAGTCCTACCCAGCTCCGGAGGGCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACAGAAGCTGCAGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CCA 90 bp TTCCCACGGCTCCGACAGAATCGCTCCAACATTTTGAGGAAGAGGTaGGTGGTCTCCACCAGGTCACGAAGGAAAGAGCGGGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: FPRLRQNRSNILRKR*VVSTRSRRKERGWH
Trigger: ATGCCAGCCCCGCTCTTTCCTTCGTGACCTGGTGGAGACCACCCACCTCTTCCTCAAAATGTTGGAGCGATTCTGTCGGAGCCGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAAGGCCCGCTTTCTTCTaGTGGGCTAGCAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRRPAFF*WASKRA
Trigger: GGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGGCCT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp TTCTTCTTGTGGGCTAGCAAGAGGGCCCTCAGGGCTTGTGCTCGGTaGTCTTTACAGTGCTCCTCATCAGAGCCTTGCTCTCCAGGGACT +
Preference number: 5 (lower is better)
Translates to: FFLWASKRALRACAR*SLQCSSSEPCSPGT
Trigger: AGTCCCTGGAGAGCAAGGCTCTGATGAGGAGCACTGTAAAGAGCACCGAGCACAAGCCCTGAGGGCCCTCTTGCTAGCCCACAAGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CCA 90 bp TCGGAAGGACCTGGTCAGAACAGCCTCAGGCAGGAAGAATCCAGGTaGACTGCTCCTAAGGACCACTTCAAGGGAAGTGAGCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: SEGPGQNSLRQEESR*TAPKDHFKGSEPMP
Trigger: TGGCATGGGCTCACTTCCCTTGAAGTGGTCCTTAGGAGCAGTCCACCTGGATTCTTCCTGCCTGAGGCTGTTCTGACCAGGTCCTTCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAAATCGAGAATGCCTGTaGCCTCGCTGGAGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRNRECL*PRWRAR
Trigger: TCGAGCCCTCCAGCGAGGCAACAGGCATTCTCGATT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGCAGGAGGCAGCTTCCTaGCGGTCAGTCAGCATCATC +
Preference number: 5 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRQEAAS*RSVSII
Trigger: GATGATGCTGACTGACCGCAAGGAAGCTGCCTCCTG...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp TCGAGAATGCCTGTTGCCTCGCTGGAGGGCTCGAGTCTTCTTTTCTaGCATCTCTCGCTGGCGCAACACCTCCAGTTCTGCAAAATCTGC +
Preference number: 5 (lower is better)
Translates to: SRMPVASLEGSSLLF*HLSLAQHLQFCKIC
Trigger: GCAGATTTTGCAGAACTGGAGGTGTTGCGCCAGCGAGAGATGGCAGAAAAGAAGACTCGAGCCCTCCAGCGAGGCAACAGGCATTCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp CTCCCTCACAGCCTCATCTGGAGATATGTCCATCTCATTCACTGTTaGCAGCAGCTCCTGATAGGCCTTCAGAGCCAAGTGCATCCGGCG +
Preference number: 5 (lower is better)
Translates to: LPHSLIWRYVHLIHC*QQLLIGLQSQVHPA
Trigger: CGCCGGATGCACTTGGCTCTGAAGGCCTATCAGGAGCTGCTGGCAACAGTGAATGAGATGGACATATCTCCAGATGAGGCTGTGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp TTCCTGTTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTTGGGTGCTaGCTTCAGCGGCTCTTTACCAACAGCGTCTTCCTCCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FLFLVAVQQLSFLGC*LQRLFTNSVFLLWG
Trigger: TCCCCAGAGGAGGAAGACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CCA 90 bp AATGAAGTGGAAGGTACGGACACTGAGGGTCTCAGAAACCAGGCCTaGCCGGAAGGAGGCAGCTCGGTTGAAGGCCATGAAGAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: NEVEGTDTEGLRNQA*PEGGSSVEGHEESQ
Trigger: TTGGCTTTCTTCATGGCCTTCAACCGAGCTGCCTCCTTCCGGCCAGGCCTGGTTTCTGAGACCCTCAGTGTCCGTACCTTCCACTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp CTCCTCATCAGAGCCTTGCTCTCCAGGGACTTTAGGCTGCAGCTCTaGCTGCAGCTTCTGTTCCTCCTCTGGTTGACTCAAAGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLIRALLSRDFRLQL*LQLLFLLWLTQRSC
Trigger: GCAGCTTCTTTGAGTCAACCAGAGGAGGAACAGAAGCTGCAGCCAGAGCTGCAGCCTAAAGTCCCTGGAGAGCAAGGCTCTGATGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAAGCAATTGTCGTTTCTaGGGTGCTGCCTTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRSNCRF*GAAFSG
Trigger: GCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp GCTGCTGAAACTGTTCGTTTTCCATGGCTTCCTCATTTTCCTCTGTaGGTGGCACCAATGGAACGGCCTGGGAGCAGCCATCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: AAETVRFPWLPHFPL*VAPMERPGSSHPLP
Trigger: GGGAAGAGGATGGCTGCTCCCAGGCCGTTCCATTGGTGCCACTCACAGAGGAAAATGAGGAAGCCATGGAAAACGAACAGTTTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 90 bp TTCTTCCTGTTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTTGGGTaGTGCCTTCAGCGGCTCTTTACCAACAGCGTCTTCCTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: FFLFLVAVQQLSFLG*CLQRLFTNSVFLLW
Trigger: CCAGAGGAGGAAGACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAACAGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 90 bp CCCATGCCAGCAGAGCTAGGGTCAGATTGTTACCAAGATGGAGGATaGCAACTTTTTCTGCCGTTTCTTGTACAGCTCCCGCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PMPAELGSDCYQDGG*QLFLPFLVQLPPLS
Trigger: GCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGGTAACAATCTGACCCTAGCTCTGCTGGCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGACGTTCAATCAGCAAGTaGTCTTCCTCCTGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRRSISK*SSSCRS
Trigger: GGAACGGCAGGAGGAAGACAACTTGCTGATTGAACG...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGTTTTTCTGCCGTTTCTaGTACAGCTCCCGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRFFCRF*YSSRRS
Trigger: TGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAA...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGCTGTTCCTCCTCTGGTaGACTCAAAGAAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRLFLLW*TQRSCC
Trigger: GCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACAG...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp GCTGCTGAAACTGTTCGTTTTCCATGGCTTCCTCATTTTCCTCTGTaGGTGGCACCAATGGAACGGCCTGGGAGCAGCCTAAGACAGGGT +
Preference number: 5 (lower is better)
Translates to: AAETVRFPWLPHFPL*VAPMERPGSSLRQG
Trigger: ACCCTGTCTTAGGCTGCTCCCAGGCCGTTCCATTGGTGCCACTCACAGAGGAAAATGAGGAAGCCATGGAAAACGAACAGTTTCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553314.1
CDS CCA 90 bp AGATGGTGGATGATCTGCTTGCGTGTTCGAGGAACAGTATTCAGGTaGGCCAAGATGGCTTCCACCACATCCTGCCCTTCCACGTCCTTA +
Preference number: 5 (lower is better)
Translates to: RWWMICLRVRGTVFR*AKMASTTSCPSTSL
Trigger: TAAGGACGTGGAAGGGCAGGATGTGGTGGAAGCCATCTTGGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CCA 90 bp TGGAAGTCCTTGACACTGTCAGCCAGTCCCATCTGTACCAGATGGTaGATGATCTGCTTGCGTGTTCGAGGAACAGTATTCAGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: WKSLTLSASPICTRW*MICLRVRGTVFRWA
Trigger: GGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGACAGTGTCAAGGACTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CCA 90 bp CTGAAACTGTTCGTTTTCCATGGCTTCCTCATTTTCCTCTGTGAGTaGCACCAATGGAACGGCCTGGGAGCAGCCATCCTCTTCCCGATC +
Preference number: 5 (lower is better)
Translates to: LKLFVFHGFLIFLCE*HQWNGLGAAILFPI
Trigger: GATCGGGAAGAGGATGGCTGCTCCCAGGCCGTTCCATTGGTGCCACTCACAGAGGAAAATGAGGAAGCCATGGAAAACGAACAGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CCA 90 bp CATCTTCTTCCTGTTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTTaGGTGCTGCCTTCAGCGGCTCTTTACCAACAGCGTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HLLPVPRRCPAIVVS*VLPSAALYQQRLPP
Trigger: AGGAGGAAGACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAACAGGAAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAAATCGCTCCAACATTTaGAGGAAGAGGTGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRNRSNI*RKRWVV
Trigger: GACCACCCACCTCTTCCTCAAAATGTTGGAGCGATT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACGACACCTGGACCACTaGCAACTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPRHLDH*QLLLFL
Trigger: GAGGAAGAGGAGGAGTTGCAAGTGGTCCAGGTGTCG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp ATTCTACTGCTCTGTCCAGTAAGAGGAGCTTCTGGGTCCTGTATGACCCTTCCACCTTCCACGTCCTTATaGGCGAGGTACAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: ILLLCPVRGASGSCMTLPPSTSL*ARYSSR
Trigger: TCGGGAGCTGTACCTCGCCAATAAGGACGTGGAAGG...TGGAAGGGTCATACAGGACCCAGAAGCTCCTCTTACTGGACAGAGCAGTAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp AGCCACCAGCCCCAGAGCCAAGAGTTTATCCACTATTCGGGCCCGTaGGCGTTTGGCTGTGATATTCTTCATGATATGACCCAGGACATC +
Preference number: 5 (lower is better)
Translates to: SHQPQSQEFIHYSGP*AFGCDILHDMTQDI
Trigger: GATGTCCTGGGTCATATCATGAAGAATATCACAGCCAAACGCTCACGGGCCCGAATAGTGGATAAACTCTTGGCTCTGGGGCTGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 90 bp TTGACACTGTCAGCCAGTCCCATCTGTACCAGATGGTGGATGATCTaGTTGCGTGTTCGAGGAACAGTATTCAGGTGGGCCAAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LTLSASPICTRWWMI*LRVRGTVFRWAKMA
Trigger: AGCCATCTTGGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGACAGTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS GCA 90 bp GCACATAGGCTCGAACGACAGTTGAACATGCAAAGCTGGACCACTTaGAACTCCTCCTCTTCCTCCTCCTCCTCCTCTTCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: AHRLERQLNMQSWTT*NSSSSSSSSSSSSS
Trigger: AGAGGAAGAAGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGATGGAGCAGAGAGGATTaGTTTCAGCAACTGGATCTC +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRWSRED*FQQLDL
Trigger: GAGATCCAGTTGCTGAAACAAATCCTCTCTGCTCCA...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAATGGGTTCCTTTCCTTaGGAAGTCCTTGACACTGTC +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRMGSFP*EVLDTV
Trigger: GACAGTGTCAAGGACTTCCAAAGGAAAGGAACCCAT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp AAGAGGTGGGTGGTCTCCACCAGGTCACGAAGGAAAGAGCGGGGCTaGCATCTCTCATCAAACTTTCGAAAAAGTGCCAGGAATAGTTCT +
Preference number: 5 (lower is better)
Translates to: KRWVVSTRSRRKERG*HLSSNFRKSARNSS
Trigger: AGAACTATTCCTGGCACTTTTTCGAAAGTTTGATGAGAGATGCCAGCCCCGCTCTTTCCTTCGTGACCTGGTGGAGACCACCCACCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp CTTTGGAAGTCCTTGACACTGTCAGCCAGTCCCATCTGTACCAGATaGTGGATGATCTGCTTGCGTGTTCGAGGAACAGTATTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LWKSLTLSASPICTR*WMICLRVRGTVFRW
Trigger: CCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGACAGTGTCAAGGACTTCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CCA 90 bp TTAGTAGCAGCACATAGGCTCGAACGACAGTTGAACATGCAAAGCTaGACCACTTGCAACTCCTCCTCTTCCTCCTCCTCCTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LVAAHRLERQLNMQS*TTCNSSSSSSSSSS
Trigger: AGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGCTGCTACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS-3UTR CAA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGGCATCAAAGAGAGGCTaGTCCTGGTGGTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLASKRG*SWWCWV
Trigger: CACCCAGCACCACCAGGACAAGCCTCTCTTTGATGC...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAACAAAGGCTTTTTGGTaGACTGCAGCCAGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRTKAFW*TAASAK
Trigger: TTTTGCACTGGCTGCAGTCAACCAAAAAGCCTTTGT...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp AGGATTTGTTTCAGCAACTGGATCTCTTCCTCTGGAGAAATGTCTTaGGAGCCAAACACATCTCCTTCAGGCCACACCTCCCGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: RICFSNWISSSGEMS*EPNTSPSGHTSRAD
Trigger: GTCTGCTCGGGAGGTGTGGCCTGAAGGAGATGTGTTTGGCTCTCAAGACATTTCTCCAGAGGAAGAGATCCAGTTGCTGAAACAAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS TCA 90 bp GGAACGGCCTGGGAGCAGCCTAAGACAGGGTCAATAGTCATATGGTaGAGATATAAGGGAAGAACTGGTTCTCCATCCCATGACCAGGTA +
Preference number: 5 (lower is better)
Translates to: GTAWEQPKTGSIVIW*RYKGRTGSPSHDQV
Trigger: TACCTGGTCATGGGATGGAGAACCAGTTCTTCCCTTATATCTTCACCATATGACTATTGACCCTGTCTTAGGCTGCTCCCAGGCCGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553314.1
CDS-3UTR CAA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAATCGAGAATGCCTGTaGCCTCGCTGGAGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRNRECL*PRWRAR
Trigger: TCGAGCCCTCCAGCGAGGCAACAGGCATTCTCGATT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCGACACCTGGACCACTaGCAACTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNRHLDH*QLLLFL
Trigger: GAGGAAGAGGAGGAGTTGCAAGTGGTCCAGGTGTCG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp AAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGAACAGAGACCAAGGTTTTCATTaGAAAGGACTAAGCTACCCT +
Preference number: 5 (lower is better)
Translates to: KLPIWCCDPPPRESQRNRDQGFH*KGLSYP
Trigger: AGGGTAGCTTAGTCCTTTCAAATGAAAACCTTGGTC...TCTGTTCCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAGAGGGCCCTCAGGGCTaGTGCTCGGTGCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQEGPQG*CSVLFT
Trigger: TGTAAAGAGCACCGAGCACAAGCCCTGAGGGCCCTC...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GTCATAAAGCTCCCCATCTGGTGCTGCGACCCACCTCCAAGAGAAAGCCAAAGGACTCACTCCTCTTATTaGCTAAGGAGCTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: VIKLPIWCCDPPPRESQRTHSSY*LRSSNN
Trigger: GTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGT...CCTTTGGCTTTCTCTTGGAGGTGGGTCGCAGCACCAGATGGGGAGCTTTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp CCGAAAGCTGGGCTCCTTAGGCAGATTGCCAAAACAGAGCAAGGCTaGTTGTGTCAAGTTCACCATCAGTCTGATAACAGCATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: PKAGLLRQIAKTEQG*LCQVHHQSDNSIKE
Trigger: CTCTTTGATGCTGTTATCAGACTGATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTTGGCAATCTGCCTAAGGAGCCCAGCTTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAGGAGGCAGCTCGGTaGAAGGCCATGAAGAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRKEAAR*KAMKKA
Trigger: GGCTTTCTTCATGGCCTTCAACCGAGCTGCCTCCTT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCGGGCCCGTGAGCGTTaGGCTGTGATATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRRARER*AVIFFM
Trigger: CATGAAGAATATCACAGCCAAACGCTCACGGGCCCG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACCACTGTGCCGGTCTGTaGGTCTCTTTTTACCCTAAA +
Preference number: 5 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNHCAGL*VSFYPK
Trigger: TTTAGGGTAAAAAGAGACCAACAGACCGGCACAGTG...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS GCA 90 bp TACCCAAGGGCACTACATGTGGCTAGAAGTTCACAGTTCATCATGTaGAAGTCCATACATCAGTGGACCAACCAACAGAGAAGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: YPRALHVARSSQFIM*KSIHQWTNQQRRKW
Trigger: CCACTTCCTTCTCTGTTGGTTGGTCCACTGATGTATGGACTTGCACATGATGAACTGTGAACTTCTAGCCACATGTAGTGCCCTTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 90 bp TCTAGGACCTTCTTCTTCTTCTTCCTTCTCTTCTTTTGTTTGTTCTaGACCACCAGGTTCCCACGGCTCCGACAGAATCGCTCCAACATT +
Preference number: 5 (lower is better)
Translates to: SRTFFFFFLLFFCLF*TTRFPRLRQNRSNI
Trigger: AATGTTGGAGCGATTCTGTCGGAGCCGTGGGAACCTGGTGGTGCAGAACAAACAAAAGAAGAGAAGGAAGAAGAAGAAGAAGGTCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp AATATTGTTCTTGATGATGCGGCTGCTCTCCCTCACAGCCTCATCTaGAGATATGTCCATCTCATTCACTGTTGCCAGCAGCTCCTGATA +
Preference number: 5 (lower is better)
Translates to: NIVLDDAAALPHSLI*RYVHLIHCCQQLLI
Trigger: TATCAGGAGCTGCTGGCAACAGTGAATGAGATGGACATATCTCCAGATGAGGCTGTGAGGGAGAGCAGCCGCATCATCAAGAACAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp CCCCTAGGCTTCTTAGCTCTTCAGTCATCCTCATCATCCTCAATCTaGTATCGTTTCTTCTTTTGGATTCCTGGAGCTCCCAACTCTGGT +
Preference number: 5 (lower is better)
Translates to: PLGFLALQSSSSSSI*YRFFFWIPGAPNSG
Trigger: ACCAGAGTTGGGAGCTCCAGGAATCCAAAAGAAGAAACGATACCAGATTGAGGATGATGAGGATGACTGAAGAGCTAAGAAGCCTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS-3UTR CAA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAAAAGGAGGCAGCTCGGTaGAAGGCCATGAAGAAAGCC +
Preference number: 5 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKKEAAR*KAMKKA
Trigger: GGCTTTCTTCATGGCCTTCAACCGAGCTGCCTCCTT...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CGGCTGGAAGCACAGGAAGCAAGAAAGCTGACGTTTCCAAGAATGGGTAAGAACCTTCCTTCTCTTCTTTaGTTTGTTCTGCACCACCAG +
Preference number: 5 (lower is better)
Translates to: RLEAQEARKLTFPRMGKNLPSLL*FVLHHQ
Trigger: CTGGTGGTGCAGAACAAACAAAAGAAGAGAAGGAAG...GTTCTTACCCATTCTTGGAAACGTCAGCTTTCTTGCTTCCTGTGCTTCCAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAGCCAGGAGACAGTCTaGGATCCGTACCATAGCTTC +
Preference number: 5 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRSQETV*DPYHSF
Trigger: GAAGCTATGGTACGGATCCAAGACTGTCTCCTGGCT...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGTGGTGGATGATCTGCTaGCGTGTTCGAGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLWWMIC*RVRGTV
Trigger: TACTGTTCCTCGAACACGCAAGCAGATCATCCACCA...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTTTCCTTTGGAAGTCCTaGACACTGTCAGCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGFLWKS*TLSASP
Trigger: GGGACTGGCTGACAGTGTCAAGGACTTCCAAAGGAA...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp ATGCTTTTCTGTGTCTTCTGTAGGGAAAGCGGAAGAAAAGGGAAGGTTGTTGGTTTTTTCTGCCGTTTCTaGTACAGCTCCCGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: MLFCVFCRESGRKGKVVGFFCRF*YSSRRS
Trigger: TGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAA...ACCAACAACCTTCCCTTTTCTTCCGCTTTCCCTACAGAAGACACAGAAAAGCAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGTTCTCAATCTCACCTTaGCCCTACCTCGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRFSISP*PYLGWK
Trigger: CTTCCAGCCGAGGTAGGGCAAAGGTGAGATTGAGAA...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS TCA 90 bp CAATCTTCTCCTGATCAAGGTCAGCTGGGACATGGAGAATATTTCTaGCCAGCAGTAGGATCCGTTCAATCAGCAAGTTGTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QSSPDQGQLGHGEYF*PAVGSVQSASCLPP
Trigger: AGGAGGAAGACAACTTGCTGATTGAACGGATCCTACTGCTGGTCAGAAATATTCTCCATGTCCCAGCTGACCTTGATCAGGAGAAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229201.4
CDS TCA 90 bp TCTTCTTCTCCTGATCAAGGTCAGCTGGGACATGGAGAATATTTCTaGCCAGCAGTAGGATCCGTTCAATCAGCAAGTTGTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SSSPDQGQLGHGEYF*PAVGSVQSASCLPP
Trigger: AGGAGGAAGACAACTTGCTGATTGAACGGATCCTACTGCTGGTCAGAAATATTCTCCATGTCCCAGCTGACCTTGATCAGGAGAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS CCA 90 bp CCTTATGGTAAGTGTCTCCCTCCAAGTACCCAAGGGCACTACATGTaGCTAGAAGTTCACAGTTCATCATGTGCAAGTCCATACATCAGT +
Preference number: 5 (lower is better)
Translates to: PYGKCLPPSTQGHYM*LEVHSSSCASPYIS
Trigger: ACTGATGTATGGACTTGCACATGATGAACTGTGAACTTCTAGCCACATGTAGTGCCCTTGGGTACTTGGAGGGAGACACTTACCATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAGCATCAAAGAGAGGCTaGTCCTGGTGGTGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQASKRG*SWWCWV
Trigger: CACCCAGCACCACCAGGACAAGCCTCTCTTTGATGC...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATACAGAGCAAGGCTGGTaGTGTCAAGTTCACCATCAG +
Preference number: 5 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNTEQGW*CQVHHQ
Trigger: CTGATGGTGAACTTGACACAACCAGCCTTGCTCTGT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp AATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAAACTCCCGCCTGAGGCTCGAACGACAGTaGAACATGCAAAGCGTTTCA +
Preference number: 5 (lower is better)
Translates to: NEDRGIWYLLKVVQNSRLRLERQ*NMQSVS
Trigger: TGAAACGCTTTGCATGTTCAACTGTCGTTCGAGCCT...CAGGCGGGAGTTTTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAACCTTCCACGTCCTTATaGGCGAGGTACAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQPSTSL*ARYSSR
Trigger: TCGGGAGCTGTACCTCGCCAATAAGGACGTGGAAGG...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATTCCTTTGGAAGTCCTaGACACTGTCAGCCAGTCCC +
Preference number: 5 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKFLWKS*TLSASP
Trigger: GGGACTGGCTGACAGTGTCAAGGACTTCCAAAGGAA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTCGGGCCCGTGAGCGTTaGGCTGTGATATTCTTCATG +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISRARER*AVIFFM
Trigger: CATGAAGAATATCACAGCCAAACGCTCACGGGCCCG...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACTGTTCCTCCTCTGGTaGACTCAAAGAAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQLFLLW*TQRSCC
Trigger: GCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACAG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp AATCTGAACTGTAGTTTCGTAGGTTGTGAAGGCCTTTGTGAAAGATaGGGTCCCTCTCCCCAATGGATTTCAACCCCTGGACAATATAGG +
Preference number: 5 (lower is better)
Translates to: NLNCSFVGCEGLCER*GPSPQWISTPGQYR
Trigger: CCTATATTGTCCAGGGGTTGAAATCCATTGGGGAGAGGGACCTCATCTTTCACAAAGGCCTTCACAACCTACGAAACTACAGTTCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTGGCTCCTTAGGCAGATaGCCAAAACAGAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISGSLGR*PKQSKA
Trigger: AGCCTTGCTCTGTTTTGGCAATCTGCCTAAGGAGCC...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTCCATCTCATTCACTGTaGCCAGCAGCTCCTGATAGG +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISPSHSL*PAAPDR
Trigger: CCTATCAGGAGCTGCTGGCAACAGTGAATGAGATGG...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATAGGCTCGAACGACAGTaGAACATGCAAAGCGTTTCA +
Preference number: 5 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNRLERQ*NMQSVS
Trigger: TGAAACGCTTTGCATGTTCAACTGTCGTTCGAGCCT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATAGAGGGCCCTCAGGGCTaGTGCTCGGTGCTCTTTACA +
Preference number: 5 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIEGPQG*CSVLFT
Trigger: TGTAAAGAGCACCGAGCACAAGCCCTGAGGGCCCTC...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCAGCAATTGTCGTTTCTaGGGTGCTGCCTTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFSNCRF*GAAFSG
Trigger: GCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCT...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 90 bp TCCACTTCTTCTGGGCTAGATGGGACATTACCAGAAACAATGGCCTaGTCTAGGACCTTCTTCTTCTTCTTCCTTCTCTTCTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: STSSGLDGTLPETMA*SRTFFFFFLLFFCL
Trigger: CAAACAAAAGAAGAGAAGGAAGAAGAAGAAGAAGGTCCTAGACCAGGCCATTGTTTCTGGTAATGTCCCATCTAGCCCAGAAGAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCCGTTCAATCAGCAAGTaGTCTTCCTCCTGCCGTTCC +
Preference number: 5 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFRSISK*SSSCRS
Trigger: GGAACGGCAGGAGGAAGACAACTTGCTGATTGAACG...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATACAGGAGGCAGCTTCCTaGCGGTCAGTCAGCATCATC +
Preference number: 5 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIQEAAS*RSVSII
Trigger: GATGATGCTGACTGACCGCAAGGAAGCTGCCTCCTG...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTAATCGCTCCAACATTTaGAGGAAGAGGTGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISNRSNI*RKRWVV
Trigger: GACCACCCACCTCTTCCTCAAAATGTTGGAGCGATT...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CTATCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGCTTCCTTCTCTTCTTTaGTTTGTTCTGCACCACCAG +
Preference number: 5 (lower is better)
Translates to: LSQMQEWASIWYLEDDHRLPSLL*FVLHHQ
Trigger: CTGGTGGTGCAGAACAAACAAAAGAAGAGAAGGAAG...CCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATACAAAGGCTTTTTGGTaGACTGCAGCCAGTGCAAAA +
Preference number: 5 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNTKAFW*TAASAK
Trigger: TTTTGCACTGGCTGCAGTCAACCAAAAAGCCTTTGT...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTGGTGGATGATCTGCTaGCGTGTTCGAGGAACAGTA +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISWWMIC*RVRGTV
Trigger: TACTGTTCCTCGAACACGCAAGCAGATCATCCACCA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAAATGGGTTCCTTTCCTTaGGAAGTCCTTGACACTGTC +
Preference number: 5 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQMGSFP*EVLDTV
Trigger: GACAGTGTCAAGGACTTCCAAAGGAAAGGAACCCAT...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAAACAGAGCAAGGCTGGTaGTGTCAAGTTCACCATCAG +
Preference number: 5 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQTEQGW*CQVHHQ
Trigger: CTGATGGTGAACTTGACACAACCAGCCTTGCTCTGT...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp CAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAACAACTTCTCTTCTTTTGTTaGTTCTGCACCACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QMQEWASIWYLEDDHRKQLLFFC*FCTTRF
Trigger: GAACCTGGTGGTGCAGAACAAACAAAAGAAGAGAAG...TTGTTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTTGGAGCAGAGAGGATTaGTTTCAGCAACTGGATCTC +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISWSRED*FQQLDL
Trigger: GAGATCCAGTTGCTGAAACAAATCCTCTCTGCTCCA...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TCTCAAATGCAGGAATGGGCCTCTATCTGGTATCTAGAGGATGATCATAGGAAATTGCCCAGGATGTATTaGGCAAAAGTCACTAGCTCT +
Preference number: 5 (lower is better)
Translates to: SQMQEWASIWYLEDDHRKLPRMY*AKVTSS
Trigger: AGAGCTAGTGACTTTTGCCAAATACATCCTGGGCAA...TTTCCTATGATCATCCTCTAGATACCAGATAGAGGCCCATTCCTGCATTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GGGCATACCGATAAAAACTGGGAGAAACAAAGACTGACAGCAGAGAAGTCCAATCCTTCCAACTCTGACTaGAATGCACCATCTAAAAAC +
Preference number: 5 (lower is better)
Translates to: GHTDKNWEKQRLTAEKSNPSNSD*NAPSKN
Trigger: GTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGG...ATTGGACTTCTCTGCTGTCAGTCTTTGTTTCTCCCAGTTTTTATCGGTATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATACCATCTCATTCACTGTaGCCAGCAGCTCCTGATAGG +
Preference number: 5 (lower is better)
Translates to: DISPSQTEMRTSNLTCLIPSHSL*PAAPDR
Trigger: CCTATCAGGAGCTGCTGGCAACAGTGAATGAGATGG...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp CATAGGAAACAAAATGAGGACAGAGGCATCTGGTATCTTCTAAAAGTGGTACAATCACTAAGCAGACGATaGAAGAGGCAGAAGACTGAC +
Preference number: 5 (lower is better)
Translates to: HRKQNEDRGIWYLLKVVQSLSRR*KRQKTD
Trigger: GTCAGTCTTCTGCCTCTTCAATCGTCTGCTTAGTGA...TTGTACCACTTTTAGAAGATACCAGATGCCTCTGTCCTCATTTTGTTTCCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TTCACTCACTCCTCTTATTTGCTAAGGAGCTCCAATAACCAAAAGAAATGGTTCTCACTAAGCAGACGATaGAAGAGGCAGAAGACTGAC +
Preference number: 5 (lower is better)
Translates to: FTHSSYLLRSSNNQKKWFSLSRR*KRQKTD
Trigger: GTCAGTCTTCTGCCTCTTCAATCGTCTGCTTAGTGA...GAACCATTTCTTTTGGTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTGACCAAGGTTTTCATTaGAAAGGACTAAGCTACCCT +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISDQGFH*KGLSYP
Trigger: AGGGTAGCTTAGTCCTTTCAAATGAAAACCTTGGTC...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS-3UTR CAA 90 bp TATGACCCTTCCAACTCTGACTTGAATGCACCATCTAAAAACGTGTCTATCTCTCCTTCCAACTCTGACTaGAATGCACCATCTAAAAAC +
Preference number: 5 (lower is better)
Translates to: YDPSNSDLNAPSKNVSISPSNSD*NAPSKN
Trigger: GTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGG...AGAGATAGACACGTTTTTAGATGGTGCATTCAAGTCAGAGTTGGAAGGGTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 90 bp GGGTACCTCAATTCATCCAAAAATGACACTTACAAATATAGTAAGTaGACAGAAGGGATGGGAGAATCTTTCCTTGGGAATAAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GYLNSSKNDTYKYSK*TEGMGESFLGNKRQ
Trigger: CTGCCTTTTATTCCCAAGGAAAGATTCTCCCATCCCTTCTGTTCACTTACTATATTTGTAAGTGTCATTTTTGGATGAATTGAGGTACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555808.1
ENST00000557589.1
CDS-3UTR CAA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATATTGCCCAGGATGTATTaGGCAAAAGTCACTAGCTCT +
Preference number: 5 (lower is better)
Translates to: DISPSQTEMRTSNLTCLILPRMY*AKVTSS
Trigger: AGAGCTAGTGACTTTTGCCAAATACATCCTGGGCAA...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS-3UTR CAA 90 bp GACATATCGCCAAGTCAGACTGAGATGAGAACTTCTAATCTTACATGTTTAATAACTCACTCCTCTTATTaGCTAAGGAGCTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: DISPSQTEMRTSNLTCLITHSSY*LRSSNN
Trigger: GTTATTGGAGCTCCTTAGCAAATAAGAGGAGTGAGT...TATTAAACATGTAAGATTAGAAGTTCTCATCTCAGTCTGACTTGGCGATATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553532.6
CDS CCA 72 bp TGGGTGAGGATGGGCAGAAGGTCGCTCTGTAGGATCTaGGCTGCCCCCAGCTGCTGCCGCACATCTCGTGTC +
Preference number: 6 (lower is better)
Translates to: WVRMGRRSLCRI*AAPSCCRTSRV
Trigger: GACACGAGATGTGCGGCAGCAGCTGGGGGCAGCCCAGATCCTACAGAGCGACCTTCTGCCCATCCTCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp TCCTCCTCTGGGGATGCCAGGCCCGCTTTCTTCTTGTaGGCTAGCAAGAGGGCCCTCAGGGCTTGTGCTCGG +
Preference number: 6 (lower is better)
Translates to: SSSGDARPAFFL*ASKRALRACAR
Trigger: CCGAGCACAAGCCCTGAGGGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGGCCTGGCATCCCCAGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CAA 90 bp CCAACAGCGTCTTCCTCCTCTGGGGATGCCAGGCCCGCTTTCTTCTaGTGGGCTAGCAAGAGGGCCCTCAGGGCTTGTGCTCGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: PTASSSSGDARPAFF*WASKRALRACARCS
Trigger: AGAGCACCGAGCACAAGCCCTGAGGGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGGCCTGGCATCCCCAGAGGAGGAAGACGCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS TCA 72 bp CATAGCTTCTGCCCGCTGCTCCTCCACTGGCACCTCTaGGGCCGCATCAAAGGGAACCACGGAGTCCATGCT +
Preference number: 6 (lower is better)
Translates to: HSFCPLLLHWHL*GRIKGNHGVHA
Trigger: AGCATGGACTCCGTGGTTCCCTTTGATGCGGCCTCAGAGGTGCCAGTGGAGGAGCAGCGGGCAGAAGCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp AGAAGGTCGCTCTGTAGGATCTGGGCTGCCCCCAGCTaGTGCCGCACATCTCGTGTCTCATCCTCATGCCTC +
Preference number: 6 (lower is better)
Translates to: RRSLCRIWAAPS*CRTSRVSSSCL
Trigger: GAGGCATGAGGATGAGACACGAGATGTGCGGCAGCAGCTGGGGGCAGCCCAGATCCTACAGAGCGACCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 72 bp TCTTCCTCCTCTGGGGATGCCAGGCCCGCTTTCTTCTaGTGGGCTAGCAAGAGGGCCCTCAGGGCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: SSSSGDARPAFF*WASKRALRACA
Trigger: AGCACAAGCCCTGAGGGCCCTCTTGCTAGCCCACAAGAAGAAAGCGGGCCTGGCATCCCCAGAGGAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS TCA 72 bp AACACCTCCAGTTCTGCAAAATCTGCACTCCGCTCCTaGGCTAAGCGTCCCTGCCCTACTCCCGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: NTSSSAKSALRS*AKRPCPTPASC
Trigger: GCAGCTGGCGGGAGTAGGGCAGGGACGCTTAGCTCAGGAGCGGAGTGCAGATTTTGCAGAACTGGAGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp AGGTCGCTCTGTAGGATCTGGGCTGCCCCCAGCTGCTaGCGCACATCTCGTGTCTCATCCTCATGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: RSLCRIWAAPSC*RTSRVSSSCLK
Trigger: TTTGAGGCATGAGGATGAGACACGAGATGTGCGGCAGCAGCTGGGGGCAGCCCAGATCCTACAGAGCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp CCTGTTGCCTCGCTGGAGGGCTCGAGTCTTCTTTTCTaGCATCTCTCGCTGGCGCAACACCTCCAGTTCTGC +
Preference number: 6 (lower is better)
Translates to: PVASLEGSSLLF*HLSLAQHLQFC
Trigger: GCAGAACTGGAGGTGTTGCGCCAGCGAGAGATGGCAGAAAAGAAGACTCGAGCCCTCCAGCGAGGCAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp CCGAAGATGAGCCTCTTCTTCGGGGCTCCATGTAGGTaGTCTGCGACTGGAAGACCTGTCATCCAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PKMSLFFGAPCR*SATGRPVIQGA
Trigger: GGCTCCCTGGATGACAGGTCTTCCAGTCGCAGAGCACCTACATGGAGCCCCGAAGAAGAGGCTCATCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 72 bp ATGCTGAGCTCAGAATTCTGGGCACAGCACTGTAGCTaGTCAGCCAGGGCTGGCCACACAGCCTCCACTTCT +
Preference number: 6 (lower is better)
Translates to: MLSSEFWAQHCS*SARAGHTASTS
Trigger: AGAAGTGGAGGCTGTGTGGCCAGCCCTGGCTGAGCAGCTACAGTGCTGTGCCCAGAATTCTGAGCTCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp CTTCTGTTCCTCCTCTGGTTGACTCAAAGAAGCTGCTaGCCTCCGGAGCTGGGTAGGACTCAGCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LLFLLWLTQRSC*PPELGRTQLGW
Trigger: CCAGCCAAGCTGAGTCCTACCCAGCTCCGGAGGGCAGCAGCTTCTTTGAGTCAACCAGAGGAGGAACAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CAA 72 bp GGCAAGATGGAGGATGCCAACTTTTTCTGCCGTTTCTaGTACAGCTCCCGCCGCTCAGCCACCAGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: GKMEDANFFCRF*YSSRRSATSPR
Trigger: TCTGGGGCTGGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp TGCACCACCAGGTTCCCACGGCTCCGACAGAATCGCTCCAACATTTaGAGGAAGAGGTGGGTGGTCTCCACCAGGTCACGAAGGAAAGAG +
Preference number: 6 (lower is better)
Translates to: CTTRFPRLRQNRSNI*RKRWVVSTRSRRKE
Trigger: CTCTTTCCTTCGTGACCTGGTGGAGACCACCCACCTCTTCCTCAAAATGTTGGAGCGATTCTGTCGGAGCCGTGGGAACCTGGTGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp GCTCCATTTGGCAAGATGGAGGATGCCAACTTTTTCTGCCGTTTCTaGTACAGCTCCCGCCGCTCAGCCACCAGCCCCAGAGCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: APFGKMEDANFFCRF*YSSRRSATSPRAKS
Trigger: ACTCTTGGCTCTGGGGCTGGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGCCAAATGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 72 bp GGTTCCCACGGCTCCGACAGAATCGCTCCAACATTTTaGGGAAGAGGTGGGTGGTCTCCACCAGGTCACGAA +
Preference number: 6 (lower is better)
Translates to: GSHGSDRIAPTF*GRGGWSPPGHE
Trigger: TTCGTGACCTGGTGGAGACCACCCACCTCTTCCTCAAAATGTTGGAGCGATTCTGTCGGAGCCGTGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 72 bp TCCACGTCCTTATTGGCGAGGTACAGCTCCCGAAGATaGGCCTCTTCTTCGGGGCTCCATGTAGGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: STSLLARYSSRR*ASSSGLHVGAL
Trigger: CAGAGCACCTACATGGAGCCCCGAAGAAGAGGCTCATCTTCGGGAGCTGTACCTCGCCAATAAGGACGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CAA 72 bp ACCAAGATGGAGGATGCCAACTTTTTCTGCCGTTTCTaGTACAGCTCCCGCCGCTCAGCCACCAGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: TKMEDANFFCRF*YSSRRSATSPR
Trigger: TCTGGGGCTGGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS TCA 72 bp CCCAGCCCAGCTGCAGCAGCTCATACAAGGTTTCACTaGGGACTCCAAAAGCCTTCTCACTGGCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: PSPAAAAHTRFH*GLQKPSHWQRP
Trigger: AGGCCTTTGCCAGTGAGAAGGCTTTTGGAGTCCTCAGTGAAACCTTGTATGAGCTGCTGCAGCTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp GCTCCATTTGGCAAGATGGAGGATGCCAACTTTTTCTaGCGTTTCTTGTACAGCTCCCGCCGCTCAGCCACC +
Preference number: 6 (lower is better)
Translates to: APFGKMEDANFF*RFLYSSRRSAT
Trigger: GGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGCCAAATGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp CTCGTCGCTGTCCAGCAATTGTCGTTTCTTGGGTGCTaGCTTCAGCGGCTCTTTACCAACAGCGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LVAVQQLSFLGC*LQRLFTNSVFL
Trigger: GAGGAAGACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CCA 72 bp CTCCGACAGAATCGCTCCAACATTTTGAGGAAGAGGTaGGTGGTCTCCACCAGGTCACGAAGGAAAGAGCGG +
Preference number: 6 (lower is better)
Translates to: LRQNRSNILRKR*VVSTRSRRKER
Trigger: CCGCTCTTTCCTTCGTGACCTGGTGGAGACCACCCACCTCTTCCTCAAAATGTTGGAGCGATTCTGTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp CCTGTTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTTaGGTGCTGCCTTCAGCGGCTCTTTACCAACAGCGT +
Preference number: 6 (lower is better)
Translates to: PVPRRCPAIVVS*VLPSAALYQQR
Trigger: ACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CAA 72 bp TCCTGTTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTaGGGTGCTGCCTTCAGCGGCTCTTTACCAACAGCG +
Preference number: 6 (lower is better)
Translates to: SCSSSLSSNCRF*GAAFSGSLPTA
Trigger: CGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CAA 90 bp TCTCCCTCACAGCCTCATCTGGAGATATGTCCATCTCATTCACTGTaGCCAGCAGCTCCTGATAGGCCTTCAGAGCCAAGTGCATCCGGC +
Preference number: 6 (lower is better)
Translates to: SPSQPHLEICPSHSL*PAAPDRPSEPSASG
Trigger: GCCGGATGCACTTGGCTCTGAAGGCCTATCAGGAGCTGCTGGCAACAGTGAATGAGATGGACATATCTCCAGATGAGGCTGTGAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp CAGATTGTTACCAAGATGGAGGATGCCAACTTTTTCTGCCGTTTCTaGTACAGCTCCCGCCGCTCAGCCACCAGCCCCAGAGCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: QIVTKMEDANFFCRF*YSSRRSATSPRAKS
Trigger: ACTCTTGGCTCTGGGGCTGGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGGTAACAATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS CAA 90 bp CGAGTCCCCATCCCAATAGCCTCCAGAGCATGTGCCTCTCTACCTTaGGAAGTCCTTGACACTGTCAGCCAGTCCCATCTGTACCAGATG +
Preference number: 6 (lower is better)
Translates to: RVPIPIASRACASLP*EVLDTVSQSHLYQM
Trigger: CATCTGGTACAGATGGGACTGGCTGACAGTGTCAAGGACTTCCAAAGGTAGAGAGGCACATGCTCTGGAGGCTATTGGGATGGGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555808.1
CDS GCA 72 bp TCAGCCAGTCCCATCTGTACCAGATGGTGGATGATCTaGTTGCGTGTTCGAGGAACAGTATTCAGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: SASPICTRWWMI*LRVRGTVFRWA
Trigger: GGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS GCA 72 bp TTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTTGGGTaGTGCCTTCAGCGGCTCTTTACCAACAGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: FLVAVQQLSFLG*CLQRLFTNSVF
Trigger: GAAGACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS CCA 72 bp TGGAGGGCTCGAGTCTTCTTTTCTGCCATCTCTCGCTaGCGCAACACCTCCAGTTCTGCAAAATCTGCACTC +
Preference number: 6 (lower is better)
Translates to: WRARVFFSAISR*RNTSSSAKSAL
Trigger: GAGTGCAGATTTTGCAGAACTGGAGGTGTTGCGCCAGCGAGAGATGGCAGAAAAGAAGACTCGAGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp GTGGTCTCCACCAGGTCACGAAGGAAAGAGCGGGGCTaGCATCTCTCATCAAACTTTCGAAAAAGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: VVSTRSRRKERG*HLSSNFRKSAR
Trigger: CCTGGCACTTTTTCGAAAGTTTGATGAGAGATGCCAGCCCCGCTCTTTCCTTCGTGACCTGGTGGAGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp ATGATCTGCTTGCGTGTTCGAGGAACAGTATTCAGGTaGGCCAAGATGGCTTCCACCACATCCTGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: MICLRVRGTVFR*AKMASTTSCPS
Trigger: GGAAGGGCAGGATGTGGTGGAAGCCATCTTGGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CCA 72 bp GCACATAGGCTCGAACGACAGTTGAACATGCAAAGCTaGACCACTTGCAACTCCTCCTCTTCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: AHRLERQLNMQS*TTCNSSSSSSS
Trigger: GGAGGAGGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS CAA 72 bp GCCAGTCCCATCTGTACCAGATGGTGGATGATCTGCTaGCGTGTTCGAGGAACAGTATTCAGGTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: ASPICTRWWMIC*RVRGTVFRWAK
Trigger: CTTGGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CAA 72 bp GCTCGAACGACAGTTGAACATGCAAAGCTGGACCACTaGCAACTCCTCCTCTTCCTCCTCCTCCTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ARTTVEHAKLDH*QLLLFLLLLLF
Trigger: GAAGAGGAGGAGGAGGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGCTTTGCATGTTCAACTGTCGTTCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS CAA 90 bp ACACTGTCAGCCAGTCCCATCTGTACCAGATGGTGGATGATCTGCTaGCGTGTTCGAGGAACAGTATTCAGGTGGGCCAAGATGGCTTCC +
Preference number: 6 (lower is better)
Translates to: TLSASPICTRWWMIC*RVRGTVFRWAKMAS
Trigger: GGAAGCCATCTTGGCCCACCTGAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CAA 90 bp TCATCTTCTTCCTGTTCCTCGTCGCTGTCCAGCAATTGTCGTTTCTaGGGTGCTGCCTTCAGCGGCTCTTTACCAACAGCGTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSSCSSSLSSNCRF*GAAFSGSLPTASSS
Trigger: GGAGGAAGACGCTGTTGGTAAAGAGCCGCTGAAGGCAGCACCCAAGAAACGACAATTGCTGGACAGCGACGAGGAACAGGAAGAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS TCA 72 bp GATCCCCCGTCCACAGTACAATATGGGTTCCTTTCCTaGTTAGGAAGGTGTCAGTGGAAGAGGAAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: DPPSTVQYGFLS*LGRCQWKRKPR
Trigger: CCTGGGCTTCCTCTTCCACTGACACCTTCCTAATCAGGAAAGGAACCCATATTGTACTGTGGACGGGGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555808.1
CDS GCA 72 bp AGTAGGGCTTCCATTTTGAGGTCATGGGCCAGCCGGTaGAGCATCTTCACAATGCAATGGTTAGTGTGGGCA +
Preference number: 6 (lower is better)
Translates to: SRASILRSWASR*SIFTMQWLVWA
Trigger: TGCCCACACTAACCATTGCATTGTGAAGATGCTGCACCGGCTGGCCCATGACCTCAAAATGGAAGCCCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 72 bp CAGATTGTTACCAAGATGGAGGATGCCAACTTTTTCTaGCGTTTCTTGTACAGCTCCCGCCGCTCAGCCACC +
Preference number: 6 (lower is better)
Translates to: QIVTKMEDANFF*RFLYSSRRSAT
Trigger: GGTGGCTGAGCGGCGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGGTAACAATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS CCA 72 bp CTTGATGATGCGGCTGCTCTCCCTCACAGCCTCATCTaGAGATATGTCCATCTCATTCACTGTTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LDDAAALPHSLI*RYVHLIHCCQQ
Trigger: CTGCTGGCAACAGTGAATGAGATGGACATATCTCCAGATGAGGCTGTGAGGGAGAGCAGCCGCATCATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 72 bp ATCCCAATAGCCTCCAGAGCATGTGCCTCTCTACCTTaGGAAGTCCTTGACACTGTCAGCCAGTCCCATCTG +
Preference number: 6 (lower is better)
Translates to: IPIASRACASLP*EVLDTVSQSHL
Trigger: CAGATGGGACTGGCTGACAGTGTCAAGGACTTCCAAAGGTAGAGAGGCACATGCTCTGGAGGCTATTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555808.1
CDS CAA 90 bp GCCTGGTCTAGGACCTTCTTCTTCTTCTTCCTTCTCTTCTTTTGTTaGTTCTGCACCACCAGGTTCCCACGGCTCCGACAGAATCGCTCC +
Preference number: 6 (lower is better)
Translates to: AWSRTFFFFFLLFFC*FCTTRFPRLRQNRS
Trigger: GGAGCGATTCTGTCGGAGCCGTGGGAACCTGGTGGTGCAGAACAAACAAAAGAAGAGAAGGAAGAAGAAGAAGAAGGTCCTAGACCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp TCTGCTGGTAGCTCCTTAGTAGCAGCACATAGGCTCGAACGACAGTaGAACATGCAAAGCTGGACCACTTGCAACTCCTCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SAGSSLVAAHRLERQ*NMQSWTTCNSSSSS
Trigger: GGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGCTGCTACTAAGGAGCTACCAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS TCA 72 bp CTTTCTCCCGAAGCAGGTGATCCTTTACTGATCCCATaGGCCGGTTGTAACAGTTCTCCAGGAACTCAGAGC +
Preference number: 6 (lower is better)
Translates to: LSPEAGDPLLIP*AGCNSSPGTQS
Trigger: GCTCTGAGTTCCTGGAGAACTGTTACAACCGGCTCATGGGATCAGTAAAGGATCACCTGCTTCGGGAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp TCCTTGACACTGTCAGCCAGTCCCATCTGTACCAGATaGTGGATGATCTGCTTGCGTGTTCGAGGAACAGTA +
Preference number: 6 (lower is better)
Translates to: SLTLSASPICTR*WMICLRVRGTV
Trigger: TACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGACAGTGTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CCA 72 bp TCATTTTCCTCTGTGAGTGGCACCAATGGAACGGCCTaGGAGCAGCCTAAGACAGGGTCAATAGTCATATGG +
Preference number: 6 (lower is better)
Translates to: SFSSVSGTNGTA*EQPKTGSIVIW
Trigger: CCATATGACTATTGACCCTGTCTTAGGCTGCTCCCAGGCCGTTCCATTGGTGCCACTCACAGAGGAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553314.1
CDS CAA 72 bp CAGCCTCATCTGGAGATATGTCCATCTCATTCACTGTaGCCAGCAGCTCCTGATAGGCCTTCAGAGCCAAGT +
Preference number: 6 (lower is better)
Translates to: QPHLEICPSHSL*PAAPDRPSEPS
Trigger: ACTTGGCTCTGAAGGCCTATCAGGAGCTGCTGGCAACAGTGAATGAGATGGACATATCTCCAGATGAGGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 72 bp AGCTCCTTAGTAGCAGCACATAGGCTCGAACGACAGTaGAACATGCAAAGCTGGACCACTTGCAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSLVAAHRLERQ*NMQSWTTCNSS
Trigger: GGAGGAGTTGCAAGTGGTCCAGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGCTGCTACTAAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS TCA 72 bp CCCCAGAGCCAAGAGTTTATCCACTATTCGGGCCCGTaGGCGTTTGGCTGTGATATTCTTCATGATATGACC +
Preference number: 6 (lower is better)
Translates to: PQSQEFIHYSGP*AFGCDILHDMT
Trigger: GGTCATATCATGAAGAATATCACAGCCAAACGCTCACGGGCCCGAATAGTGGATAAACTCTTGGCTCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 72 bp GCAGAGCTAGGGTCAGATTGTTACCAAGATGGAGGATaGCAACTTTTTCTGCCGTTTCTTGTACAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: AELGSDCYQDGG*QLFLPFLVQLP
Trigger: CGGGAGCTGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGGTAACAATCTGACCCTAGCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS CCA 72 bp GGGCTCCTTAGGCAGATTGCCAAAACAGAGCAAGGCTaGTTGTGTCAAGTTCACCATCAGTCTGATAACAGC +
Preference number: 6 (lower is better)
Translates to: GLLRQIAKTEQG*LCQVHHQSDNS
Trigger: GCTGTTATCAGACTGATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTTGGCAATCTGCCTAAGGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp TTGACACTGTCAGCCAGTCCCATCTGTACCAGATGGTaGATGATCTGCTTGCGTGTTCGAGGAACAGTATTC +
Preference number: 6 (lower is better)
Translates to: LTLSASPICTRW*MICLRVRGTVF
Trigger: GAATACTGTTCCTCGAACACGCAAGCAGATCATCCACCATCTGGTACAGATGGGACTGGCTGACAGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000555808.1
ENST00000557589.1
CDS CAA 72 bp AGGACCTTCTTCTTCTTCTTCCTTCTCTTCTTTTGTTaGTTCTGCACCACCAGGTTCCCACGGCTCCGACAG +
Preference number: 6 (lower is better)
Translates to: RTFFFFFLLFFC*FCTTRFPRLRQ
Trigger: CTGTCGGAGCCGTGGGAACCTGGTGGTGCAGAACAAACAAAAGAAGAGAAGGAAGAAGAAGAAGAAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp CAGGTAGTCCAGAAAATTAAATTCTTTCTCCGACACCTGGACCACTaGCAACTCCTCCTCTTCCTCCTCCTCCTCCTCTTCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: QVVQKIKFFLRHLDH*QLLLFLLLLLFFFL
Trigger: GAGGAAGAAGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGTTGCAAGTGGTCCAGGTGTCGGAGAAAGAATTTAATTTTCTGGACTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp TCTTCAGTCATCCTCATCATCCTCAATCTGGTATCGTTTCTTCTTTaGGATTCCTGGAGCTCCCAACTCTGGTGCTCTGTTCCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: SSVILIILNLVSFLL*DSWSSQLWCSVPAL
Trigger: GAGGGCAGGAACAGAGCACCAGAGTTGGGAGCTCCAGGAATCCAAAAGAAGAAACGATACCAGATTGAGGATGATGAGGATGACTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229201.4
ENST00000553532.6
ENST00000557589.1
CDS GCA 72 bp TTCTTCTTCTTCTTCCTTCTCTTCTTTTGTTTGTTCTaGACCACCAGGTTCCCACGGCTCCGACAGAATCGC +
Preference number: 6 (lower is better)
Translates to: FFFFFLLFFCLF*TTRFPRLRQNR
Trigger: GCGATTCTGTCGGAGCCGTGGGAACCTGGTGGTGCAGAACAAACAAAAGAAGAGAAGGAAGAAGAAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp AAGTGTCTCCCTCCAAGTACCCAAGGGCACTACATGTaGCTAGAAGTTCACAGTTCATCATGTGCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: KCLPPSTQGHYM*LEVHSSSCASP
Trigger: TGGACTTGCACATGATGAACTGTGAACTTCTAGCCACATGTAGTGCCCTTGGGTACTTGGAGGGAGACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 90 bp AAAGCTGGGCTCCTTAGGCAGATTGCCAAAACAGAGCAAGGCTGGTaGTGTCAAGTTCACCATCAGTCTGATAACAGCATCAAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: KAGLLRQIAKTEQGW*CQVHHQSDNSIKER
Trigger: CCTCTCTTTGATGCTGTTATCAGACTGATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTTGGCAATCTGCCTAAGGAGCCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS TCA 72 bp CCTGATCAAGGTCAGCTGGGACATGGAGAATATTTCTaGCCAGCAGTAGGATCCGTTCAATCAGCAAGTTGT +
Preference number: 6 (lower is better)
Translates to: PDQGQLGHGEYF*PAVGSVQSASC
Trigger: ACAACTTGCTGATTGAACGGATCCTACTGCTGGTCAGAAATATTCTCCATGTCCCAGCTGACCTTGATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp TCTGGGCTAGATGGGACATTACCAGAAACAATGGCCTaGTCTAGGACCTTCTTCTTCTTCTTCCTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: SGLDGTLPETMA*SRTFFFFFLLF
Trigger: GAAGAGAAGGAAGAAGAAGAAGAAGGTCCTAGACCAGGCCATTGTTTCTGGTAATGTCCCATCTAGCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp CATGCCAGCAGAGCTAGGGTCAGATTGTTACCAAGATaGAGGATGCCAACTTTTTCTGCCGTTTCTTGTACA +
Preference number: 6 (lower is better)
Translates to: HASRARVRLLPR*RMPTFSAVSCT
Trigger: TGTACAAGAAACGGCAGAAAAAGTTGGCATCCTCCATCTTGGTAACAATCTGACCCTAGCTCTGCTGGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557589.1
CDS CAA 72 bp CTCCTTAGGCAGATTGCCAAAACAGAGCAAGGCTGGTaGTGTCAAGTTCACCATCAGTCTGATAACAGCATC +
Preference number: 6 (lower is better)
Translates to: LLRQIAKTEQGW*CQVHHQSDNSI
Trigger: GATGCTGTTATCAGACTGATGGTGAACTTGACACAACCAGCCTTGCTCTGTTTTGGCAATCTGCCTAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS GCA 72 bp GCACTACATGTGGCTAGAAGTTCACAGTTCATCATGTaGAAGTCCATACATCAGTGGACCAACCAACAGAGA +
Preference number: 6 (lower is better)
Translates to: ALHVARSSQFIM*KSIHQWTNQQR
Trigger: TCTCTGTTGGTTGGTCCACTGATGTATGGACTTGCACATGATGAACTGTGAACTTCTAGCCACATGTAGTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CCA 72 bp AGTTCACAGTTCATCATGTGCAAGTCCATACATCAGTaGACCAACCAACAGAGAAGGAAGTGGAGAAACAGG +
Preference number: 6 (lower is better)
Translates to: SSQFIMCKSIHQ*TNQQRRKWRNR
Trigger: CCTGTTTCTCCACTTCCTTCTCTGTTGGTTGGTCCACTGATGTATGGACTTGCACATGATGAACTGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6
CDS CAA 72 bp AGCTCCTTAGTAGCAGCACATAGGCTCGAACGACAGTaGAACATGCAAAGCGTTTCAGGTAGTCCAGAAAAT +
Preference number: 6 (lower is better)
Translates to: SSLVAAHRLERQ*NMQSVSGSPEN
Trigger: ATTTTCTGGACTACCTGAAACGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGCTGCTACTAAGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229201.4
ENST00000553532.6