RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIGD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000278016

Ensembl transcript IDs: ENST00000321385.5, ENST00000504548.4

Found 580 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAGTGGCCATTGAGGGACTGGGGGACAGGCCACAGCCACCCCGATaGGAGGAGCGGGCCTGCCCTCACCGACACCAGCCTCCTGGGACC +
Preference number: 1 (lower is better)
Translates to: KVAIEGLGDRPQPPR*EERACPHRHQPPGT
Trigger: GGTCCCAGGAGGCTGGTGTCGGTGAGGGCAGGCCCGCTCCTCTCATCGGGGTGGCTGTGGCCTGTCCCCCAGTCCCTCAATGGCCACTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp AGGGCAGCGCCACGGGCCGCCCAGACTACAGACAAGGCCTGGCTATaGAGCCCTCACTGGCACCGCGGCCGTGAAGTCAGCTTCTCCTCA +
Preference number: 1 (lower is better)
Translates to: RAAPRAAQTTDKAWL*SPHWHRGREVSFSS
Trigger: TGAGGAGAAGCTGACTTCACGGCCGCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGTCTGGGCGGCCCGTGGCGCTGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp CGGGCCGCCCAGACTACAGACAAGGCCTGGCTATGCAGCCCTCACTaGCACCGCGGCCGTGAAGTCAGCTTCTCCTCAGAGCCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: RAAQTTDKAWLCSPH*HRGREVSFSSEPWR
Trigger: CCTCCAGGGCTCTGAGGAGAAGCTGACTTCACGGCCGCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGTCTGGGCGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp GGCCTGGCAGGCGATGGCACCCGCGCAGCTTTGGGAAAGAACACTTaGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCA +
Preference number: 1 (lower is better)
Translates to: GLAGDGTRAALGKNT*PPKGFCHPWGPLQP
Trigger: TGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 90 bp AGCATGGGCCAGGCCTCTCTTCCAGCTGTGCCCCCAGGGTGCCAGTaGGGCAGGGCGACCTCTCACCAACAGAGCTCCTCCAAGCCATGC +
Preference number: 1 (lower is better)
Translates to: SMGQASLPAVPPGCQ*GRATSHQQSSSKPC
Trigger: GCATGGCTTGGAGGAGCTCTGTTGGTGAGAGGTCGCCCTGCCTCACTGGCACCCTGGGGGCACAGCTGGAAGAGAGGCCTGGCCCATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp GTCACCACAGCCAGGGCCTGGCAGGCGATGGCACCCGCGCAGCTTTaGGAAAGAACACTTGGCCTCCCAAAGGGTTCTGCCACCCCTGGG +
Preference number: 1 (lower is better)
Translates to: VTTARAWQAMAPAQL*ERTLGLPKGSATPG
Trigger: CCCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCCTGGCTGTGGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp CAGAGGGTGGCACTGCGTATTGCCCTGGGGGCTAATGCCAGGGCCTaGTTCCAGGTAAGTCAGGTGGCTCCAGGCCCTGGGACTGGACAG +
Preference number: 1 (lower is better)
Translates to: QRVALRIALGANARA*FQVSQVAPGPGTGQ
Trigger: CTGTCCAGTCCCAGGGCCTGGAGCCACCTGACTTACCTGGAAGCAGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTGCCACCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp ATGGGGACGAGGGGTCAACACCTGGAGGCAAGCAGGCCAGCTCCCTaGCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCC +
Preference number: 1 (lower is better)
Translates to: MGTRGQHLEASRPAP*PSHQLGQHLCKGSS
Trigger: GGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGCAGGGAGCTGGCCTGCTTGCCTCCAGGTGTTGACCCCTCGTCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp CTGTGCCTTGTATGCCCCGTACATGTGCCTGCCCTGAGAGGAGCATaGGCCAGGCCTCTCTTCCAGCTGTGCCCCCAGGGTGCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: LCLVCPVHVPALRGA*ARPLFQLCPQGASE
Trigger: CTCACTGGCACCCTGGGGGCACAGCTGGAAGAGAGGCCTGGCCCATGCTCCTCTCAGGGCAGGCACATGTACGGGGCATACAAGGCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp CCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACATGTGCCTaGCCTGAGAGGAGCATGGGCCAGGCCTCTCTTCCAGCTGTGCCC +
Preference number: 1 (lower is better)
Translates to: PVPTGAVPCMPRTCA*PERSMGQASLPAVP
Trigger: GGGCACAGCTGGAAGAGAGGCCTGGCCCATGCTCCTCTCAGGGCAGGCACATGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp CGGGGGCCAGAGCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTaGCTTGTATGCCCCGTACATGTGCCTGCCCTGAGAGGAGCATGG +
Preference number: 1 (lower is better)
Translates to: RGPEQEHSHLFQQAL*LVCPVHVPALRGAW
Trigger: CCATGCTCCTCTCAGGGCAGGCACATGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGCTCTGGCCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 90 bp CACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTaGGGAGGCATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACT +
Preference number: 1 (lower is better)
Translates to: HQLGQHLCKGSSHPT*GGMGIPGPSPTRRT
Trigger: AGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATGCCTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp TGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGCCTGGAGCTaGTGCCCTGAGCTCTGCTCAGGGAGTCTGTTTCTTCTTCCCCAA +
Preference number: 1 (lower is better)
Translates to: CRWRWPDGLSRHAWS*CPELCSGSLFLLPQ
Trigger: TTGGGGAAGAAGAAACAGACTCCCTGAGCAGAGCTCAGGGCAGCAGCTCCAGGCATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp AGGGCGACCTCTCACCAACAGAGCTCCTCCAAGCCATGCTGGATTTaGATTCCTGGAACCCCCTGTACCCATGCGGTGGGCCACCCCAGG +
Preference number: 1 (lower is better)
Translates to: RATSHQQSSSKPCWI*IPGTPCTHAVGHPR
Trigger: CCTGGGGTGGCCCACCGCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCTCTGTTGGTGAGAGGTCGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp CTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGCATGGGCATCCCTaGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: LQRQFPPYLRRHGHP*PQSNQKDCRSRPGQ
Trigger: CTGGCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATGCCTCCTCAGGTAGGGTGGGAACTGCCTTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp CCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTaGGGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: PKGSATPGGRYSHQP*GLSITSDTEQNPER
Trigger: CCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACCCCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 90 bp CCCAAGCCTGCAGGTCCTTGGGCCAAGGCAGTGGCCTCGTCCCCCTaGAAACGCGGGTCGGGTGGTTTCAACAAAACCTGCACTCATCTT +
Preference number: 1 (lower is better)
Translates to: PKPAGPWAKAVASSP*KRGSGGFNKTCTHL
Trigger: AAGATGAGTGCAGGTTTTGTTGAAACCACCCGACCCGCGTTTTCAGGGGGACGAGGCCACTGCCTTGGCCCAAGGACCTGCAGGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp AATGGTCTGTGGCTGATGAGGAAGCAGGGGAAACTCTCCTGCCGTTaGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCAC +
Preference number: 1 (lower is better)
Translates to: NGLWLMRKQGKLSCR*PSHQGPKPGSCQSH
Trigger: GTGGGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTGCTTCCTCATCAGCCACAGACCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp CAGGGCCTGCTTCCAGGTAAGTCAGGTGGCTCCAGGCCCTGGGACTaGACAGAATGGTCTGTGGCTGATGAGGAAGCAGGGGAAACTCTC +
Preference number: 1 (lower is better)
Translates to: QGLLPGKSGGSRPWD*TEWSVADEEAGETL
Trigger: GAGAGTTTCCCCTGCTTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGAGCCACCTGACTTACCTGGAAGCAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 90 bp GTTGGAAATGAAAGCCTCGCCAAAGACGCAGCGGCAATGAGTAGTTaGGCTGAAGGGCAGCGCCACGGGCCGCCCAGACTACAGACAAGG +
Preference number: 1 (lower is better)
Translates to: VGNESLAKDAAAMSS*AEGQRHGPPRLQTR
Trigger: CCTTGTCTGTAGTCTGGGCGGCCCGTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGCTGCGTCTTTGGCGAGGCTTTCATTTCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 90 bp GAAGAAAGGTTGGAAATGAAAGCCTCGCCAAAGACGCAGCGGCAATaGGTAGTTGGGCTGAAGGGCAGCGCCACGGGCCGCCCAGACTAC +
Preference number: 1 (lower is better)
Translates to: EERLEMKASPKTQRQ*VVGLKGSATGRPDY
Trigger: GTAGTCTGGGCGGCCCGTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGCTGCGTCTTTGGCGAGGCTTTCATTTCCAACCTTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTaGCAATCCCACGGAATAAGAGATCTGTTCAGTTTTCTTAGGGAA +
Preference number: 1 (lower is better)
Translates to: LSCRWPSHQGPKPGS*QSHGIRDLFSFLRE
Trigger: TTCCCTAAGAAAACTGAACAGATCTCTTATTCCGTGGGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 90 bp AGTGGACATGTCCAGCCTTTATTAGATAAAGCCACTGGGCCCATCTaGCCAGGCGAGCTCAGCTGTAAACAAGCTCGCCAGTTAGAGGAA +
Preference number: 1 (lower is better)
Translates to: SGHVQPLLDKATGPI*PGELSCKQARQLEE
Trigger: TTCCTCTAACTGGCGAGCTTGTTTACAGCTGAGCTCGCCTGGTCAGATGGGCCCAGTGGCTTTATCTAATAAAGGCTGGACATGTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCCCCCAGGGTGCCAGTaGGGCAGGGCGACCTCTCAC +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLPPGCQ*GRATSH
Trigger: GTGAGAGGTCGCCCTGCCTCACTGGCACCCTGGGGG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 90 bp GGGCCTGGCAGGCGATGGCACCCGCGCAGCTTTGGGAAAGAACACTaGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCC +
Preference number: 2 (lower is better)
Translates to: GPGRRWHPRSFGKEH*ASQRVLPPLGAATA
Trigger: GGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGTCCAGTGCATGTGACTaGTGCAGGGGCGGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWSSACD*CRGGGP
Trigger: TGGGCCTCCGCCCCTGCACCAGTCACATGCACTGGA...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGGGGCCTGTGCCCCTaGGAAGGTGCTGGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLGGLCP*EGAGPN
Trigger: ATTTGGGCCAGCACCTTCCCAGGGGCACAGGCCCCC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCCACTGCCAAGCTGGTaGACAGCCCTTCCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLPLPSW*TALPFP
Trigger: GGGGAAGGGAAGGGCTGTGCACCAGCTTGGCAGTGG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCACTGCGTATTGCCCTaGGGGCTAATGCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWHCVLP*GLMPGP
Trigger: AGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTG...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAGAGCCCACAGAGGGTaGCACTGCGTATTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWRAHRG*HCVLPW
Trigger: CCAGGGCAATACGCAGTGCCACCCTCTGTGGGCTCT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCCGACACCAGCCTCCTaGGACCCGGGCCAACAAAAG +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLPTPAS*DPGQQK
Trigger: CTTTTGTTGGCCCGGGTCCCAGGAGGCTGGTGTCGG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTGGCCATTGAGGGACTaGGGGACAGGCCACAGCCAC +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLWPLRD*GTGHSH
Trigger: GTGGCTGTGGCCTGTCCCCCAGTCCCTCAATGGCCA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCTCGTCCAGTGCATGTaGCTGGTGCAGGGGCGGAGG +
Preference number: 2 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSLVQCM*LVQGRR
Trigger: CCTCCGCCCCTGCACCAGTCACATGCACTGGACGAG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGCGAGGGGTCAACACCTaGAGGCAAGCAGGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMRGVNT*RQAGQL
Trigger: GAGCTGGCCTGCTTGCCTCCAGGTGTTGACCCCTCG...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 90 bp TGTCACCACAGCCAGGGCCTGGCAGGCGATGGCACCCGCGCAGCTTaGGGAAAGAACACTTGGCCTCCCAAAGGGTTCTGCCACCCCTGG +
Preference number: 2 (lower is better)
Translates to: CHHSQGLAGDGTRAA*GKNTWPPKGFCHPW
Trigger: CCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCCTGGCTGTGGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCTCGTCCAGTGCATGTaGCTGGTGCAGGGGCGGAGG +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPLVQCM*LVQGRR
Trigger: CCTCCGCCCCTGCACCAGTCACATGCACTGGACGAG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGCTTCGCCACTGAGATaGTTGTGCTGTGGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMASPLR*LCCGSG
Trigger: CCCGGAGCCACAGCACAATCATCTCAGTGGCGAAGC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAGCAGGCCAGCTCCCTaGCCCTCACACCAGCTCGGG +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSSRPAP*PSHQLG
Trigger: CCCGAGCTGGTGTGAGGGGCAGGGAGCTGGCCTGCT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGCCCTGAGAGGAGCATaGGCCAGGCCTCTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSALRGA*ARPLFQ
Trigger: CTGGAAGAGAGGCCTGGCCCATGCTCCTCTCAGGGC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGGGTTCTGCCACCCCTaGGGGCCGCTACAGCCACCA +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSGFCHP*GPLQPP
Trigger: TGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGTGTGCTTCGCCACTaGGATGATTGTGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLGVLRH*DDCAVA
Trigger: AGCCACAGCACAATCATCTCAGTGGCGAAGCACACC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTCCCCTCCCTCCAAGTaGAGCAGGAGAAAGGTCACT +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLSPPSK*SRRKVT
Trigger: AGTGACCTTTCTCCTGCTGCACTTGGAGGGAGGGGA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCCCCGTACATGTGCCTaGCCTGAGAGGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPPRTCA*PERSMG
Trigger: GCCCATGCTCCTCTCAGGGCAGGCACATGTACGGGG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAGTGCATGTGACTGGTaGAGGGGCGGAGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSSACDW*RGGGPA
Trigger: GGCTGGGCCTCCGCCCCTGCACCAGTCACATGCACT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGCCCTGAGAGGAGCATaGGCCAGGCCTCTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPALRGA*ARPLFQ
Trigger: CTGGAAGAGAGGCCTGGCCCATGCTCCTCTCAGGGC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTTCCAGTGCATGTGACTaGTGCAGGGGCGGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPSSACD*CRGGGP
Trigger: TGGGCCTCCGCCCCTGCACCAGTCACATGCACTGGA...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAGAGCCCACAGAGGGTaGCACTGCGTATTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMRAHRG*HCVLPW
Trigger: CCAGGGCAATACGCAGTGCCACCCTCTGTGGGCTCT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGGCTCTTCCTGCAGGTaGCGGTGGCCTGATGGGCTC +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSGSSCR*RWPDGL
Trigger: GAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 90 bp CAGGGCGACCTCTCACCAACAGAGCTCCTCCAAGCCATGCTGGATTaGGATTCCTGGAACCCCCTGTACCCATGCGGTGGGCCACCCCAG +
Preference number: 2 (lower is better)
Translates to: QGDLSPTELLQAMLD*DSWNPLYPCGGPPQ
Trigger: CTGGGGTGGCCCACCGCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCTCTGTTGGTGAGAGGTCGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAACAGAACCAGGGTTTaGCAGGCCCTGGGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMNRTRV*QALGPF
Trigger: AAAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCTCTTGGGGGCCATCTaGGCTGAGGACAGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSLLGAI*AEDSWL
Trigger: CAGCCAGCTGTCCTCAGCTCAGATGGCCCCCAAGAG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCCCGTACATGTGCCTaGCCTGAGAGGAGCATGGGC +
Preference number: 2 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPRTCA*PERSMG
Trigger: GCCCATGCTCCTCTCAGGGCAGGCACATGTACGGGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAGTTCCCACCCTACCTaGGGAGGCATGGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSSSHPT*GGMGIP
Trigger: AGGGATGCCCATGCCTCCTCAGGTAGGGTGGGAACT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACCACAGCCACCCCGATaGGAGGAGCGGGCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAPQPPR*EERACP
Trigger: AGGGCAGGCCCGCTCCTCTCATCGGGGTGGCTGTGG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGCGCTGTGCCTTGTATaGCCCGTACATGTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSALCLV*PVHVPA
Trigger: GGCAGGCACATGTACGGGGCATACAAGGCACAGCGC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTTCCAACAGGCGCTGTaGCTTGTATGCCCCGTACAT +
Preference number: 2 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMFQQAL*LVCPVH
Trigger: ATGTACGGGGCATACAAGGCACAGCGCCTGTTGGAA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTCTACACCTCCCTGCTaGACCCAGAACCTAATACAG +
Preference number: 2 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLSTPPC*TQNLIQ
Trigger: CTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAGGCATGCCTGGAGCTaGTGCCCTGAGCTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSRHAWS*CPELCS
Trigger: TGAGCAGAGCTCAGGGCAGCAGCTCCAGGCATGCCT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGTGCCCCTGGGAAGGTaGTGGCCCAAATGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSVPLGR*WPKCLR
Trigger: CCTGAGACATTTGGGCCAGCACCTTCCCAGGGGCAC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCCCTGTACCCATGCGGTaGGCCACCCCAGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: KETELYTSLLHPEPNTGLPVPMR*ATPGGG
Trigger: CCCTCCCCCTGGGGTGGCCCACCGCATGGGTACAGG...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTTCCAGGCCCTGGGACTaGACAGAATGGTCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPSRPWD*TEWSVA
Trigger: AGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGA...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGGGTTTGACAGGCCCTaGGGCCCTTTCCTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPGFDRP*GPFLLS
Trigger: TGAAAGGAGGAAAGGGCCCCAGGGCCTGTCAAACCC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 90 bp GAATGGTCTGTGGCTGATGAGGAAGCAGGGGAAACTCTCCTGCCGTaGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCA +
Preference number: 2 (lower is better)
Translates to: EWSVADEEAGETLLP*AKSPGPKARQLPIP
Trigger: TGGGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTGCTTCCTCATCAGCCACAGACCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAGGCAGACCCACTCTTaGCAGGCTCCTAATGTCCCC +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSRQTHS*QAPNVP
Trigger: GGGGACATTAGGAGCCTGTCAAGAGTGGGTCTGCCT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAACCCCCTGTACCCATaGGGTGGGCCACCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: KETELYTSLLHPEPNTGLNPLYP*GGPPQG
Trigger: CCCCTGGGGTGGCCCACCGCATGGGTACAGGGGGTT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCCTGTACCCATGCGGTaGGCCACCCCAGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELPVPMR*ATPGGG
Trigger: CCCTCCCCCTGGGGTGGCCCACCGCATGGGTACAGG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGGACAGAATGGTCTGTaGCTGATGAGGAAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: APHTSSGSISAKAVPTLPGQNGL*LMRKQG
Trigger: CCCCTGCTTCCTCATCAGCCACAGACCATTCTGTCC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCTCCAGGCCCTGGGACTaGACAGAATGGTCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGSRPWD*TEWSVA
Trigger: AGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGA...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGGTGTGCTTCGCCACTaGGATGATTGTGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSGVLRH*DDCAVA
Trigger: AGCCACAGCACAATCATCTCAGTGGCGAAGCACACC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAGTGCATGTGACTGGTaGAGGGGCGGAGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRASACDW*RGGGPA
Trigger: GGCTGGGCCTCCGCCCCTGCACCAGTCACATGCACT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCCCTTCCCTTCCCCGTaGAGGCCTCCAGCCTACCCC +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELPFPSP*RPPAYP
Trigger: GGGGTAGGCTGGAGGCCTGCACGGGGAAGGGAAGGG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGGAGGGGAGGAGAGATaGGAGACTGTGTGTATGTCC +
Preference number: 2 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWGGEER*ETVCMS
Trigger: GGACATACACACAGTCTCCCATCTCTCCTCCCCTCC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGAGATGATTGTGCTGTaGCTCCGGGGCCACATAGCA +
Preference number: 2 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEEMIVL*LRGHIA
Trigger: TGCTATGTGGCCCCGGAGCCACAGCACAATCATCTC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGAGATGATTGTGCTGTaGCTCCGGGGCCACATAGCA +
Preference number: 2 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGEMIVL*LRGHIA
Trigger: TGCTATGTGGCCCCGGAGCCACAGCACAATCATCTC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGGACAGAATGGTCTGTaGCTGATGAGGAAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSGQNGL*LMRKQG
Trigger: CCCCTGCTTCCTCATCAGCCACAGACCATTCTGTCC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 90 bp CCTGGGGCCCTTTCCTCCTTTCAAAGTAGGCCTCCCAGGAGCAGCTaGTCAGCCACATCCTTGGCAGTCCCAGGAGAGGCAGAAAAGTCT +
Preference number: 2 (lower is better)
Translates to: PGALSSFQSRPPRSS*SATSLAVPGEAEKS
Trigger: AGACTTTTCTGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACAAGCTGCTCCTGGGAGGCCTACTTTGAAAGGAGGAAAGGGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCTACATGTGCCTGCCCTaGGAGGAGCATGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: KETELYTSLLHPEPNTGLYMCLP*EEHGPG
Trigger: GCCTGGCCCATGCTCCTCTCAGGGCAGGCACATGTA...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACTGGAGCTGCTGCCCTaGGCTCTGCTCAGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRALELLP*ALLRES
Trigger: AGACTCCCTGAGCAGAGCTCAGGGCAGCAGCTCCAG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGGGGGCCATCTGAGCTaGGGACAGCTGGCTGTACCT +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAGGHLS*GQLAVP
Trigger: AGGTACAGCCAGCTGTCCTCAGCTCAGATGGCCCCC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCCCTCTCTTCCAGCTGTaGCCCCAGGGTGCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: KETELYTSLLHPEPNTGLPLFQL*PQGASE
Trigger: CTCACTGGCACCCTGGGGGCACAGCTGGAAGAGAGG...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCTGGATTTGGATTCCTaGAACCCCCTGTACCCATGC +
Preference number: 2 (lower is better)
Translates to: HTSSGSISAKAVPTLPEELDLDS*NPLYPC
Trigger: GCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAGTTCCCACCCTACCTaGGGAGGCATGGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRASSHPT*GGMGIP
Trigger: AGGGATGCCCATGCCTCCTCAGGTAGGGTGGGAACT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGTCTACACCTCCCTGCTaGACCCAGAACCTAATACAG +
Preference number: 2 (lower is better)
Translates to: HTSSGSISAKAVPTLPEESTPPC*TQNLIQ
Trigger: CTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGA...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACACAGAGGGTGGCACTaGGTATTGCCCTGGGGGCTA +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAHRGWH*VLPWGL
Trigger: TAGCCCCCAGGGCAATACGCAGTGCCACCCTCTGTG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACACTGGATTTGGATTCCTaGAACCCCCTGTACCCATGC +
Preference number: 2 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTLDLDS*NPLYPC
Trigger: GCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAG...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCTATAAAGGTCACTTTTaGGGGACACCCTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSYKGHF*GTPSSC
Trigger: GCAGCTGGAGGGTGTCCCCCAAAAGTGACCTTTATA...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGCGGCAATGAGTAGTTaGGCTGAAGGGCAGCGCCAC +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAAAMSS*AEGQRH
Trigger: GTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGTTAGAGGAAGCAGATaGAGCCTCACCCCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAVRGSR*SLTPAH
Trigger: GTGGGCTGGGGTGAGGCTGCATCTGCTTCCTCTAAC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACATCCTCCAAGCCATGCTaGATTTGGATTCCTGGAACC +
Preference number: 2 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTSSKPC*IWIPGT
Trigger: GGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGA...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCACTGCGTATTGCCCTaGGGGCTAATGCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELHCVLP*GLMPGP
Trigger: AGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATGTCAGCCACATCCTTaGCAGTCCCAGGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRACQPHP*QSQERQ
Trigger: CTGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCAGGGGAAACTCTCCTaGCGTTGGCCAAGTCACCAG +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELQGKLS*RWPSHQ
Trigger: CTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGCTAATGCCAGGGCCTaGTTCCAGGTAAGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAANARA*FQVSQV
Trigger: CACCTGACTTACCTGGAAGCAGGCCCTGGCATTAGC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGGGTTTGACAGGCCCTaGGGCCCTTTCCTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELGFDRP*GPFLLS
Trigger: TGAAAGGAGGAAAGGGCCCCAGGGCCTGTCAAACCC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATTCCAACAGGCGCTGTaGCTTGTATGCCCCGTACAT +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAFQQAL*LVCPVH
Trigger: ATGTACGGGGCATACAAGGCACAGCGCCTGTTGGAA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAGCTCCTCCAAGCCATaGTGGATTTGGATTCCTGGA +
Preference number: 2 (lower is better)
Translates to: KETELYTSLLHPEPNTGLSSSKP*WIWIPG
Trigger: TCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCCAAAGCCAGGCAGCTaGCAATCCCACGGAATAAGA +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELPKPGS*QSHGIR
Trigger: TCTTATTCCGTGGGATTGGCAGCTGCCTGGCTTTGG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCATATATTTCTTCACTTaGGGGCAGTTCCAAGGAACT +
Preference number: 2 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSIYFFT*GQFQGT
Trigger: AGTTCCTTGGAACTGCCCGCAAGTGAAGAAATATAT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAAGCCATGCTGGATTTaGATTCCTGGAACCCCCTGT +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAKPCWI*IPGTPC
Trigger: ACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATGGGACTGGACAGAATaGTCTGTGGCTGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAWDWTE*SVADEE
Trigger: TTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAACTCTACACCTCCCTaGTGCACCCAGAACCTAATA +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRANSTPP*CTQNLI
Trigger: TATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAGGTGTGAGCCAACGTaGCTGGCCTCTTTTATCTTA +
Preference number: 2 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRARCEPT*LASFIL
Trigger: TAAGATAAAAGAGGCCAGGCACGTTGGCTCACACCT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGAAGCCATGCTGGATTTaGATTCCTGGAACCCCCTGT +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELKPCWI*IPGTPC
Trigger: ACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTT...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGTGGGACTGGACAGAATaGTCTGTGGCTGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELWDWTE*SVADEE
Trigger: TTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCA...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCTTGTTTATAGAAAGTaGCCATTGAGGGACTGGGGG +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELLVYRK*PLRDWG
Trigger: CCCCCAGTCCCTCAATGGCCACTTTCTATAAACAAG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGCAATCTCTGCCTTCTaGCTTCAAGCATTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: GLSITSDTEQNPERVSELAISAF*LQAFLV
Trigger: CACGAGAAATGCTTGAAGCCAGAAGGCAGAGATTGC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAAAAATAGAATCAAGTaGTGTGCTTCGCCACTGAGA +
Preference number: 2 (lower is better)
Translates to: KETELYTSLLHPEPNTGLKNRIK*CASPLR
Trigger: TCTCAGTGGCGAAGCACACCACTTGATTCTATTTTT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATAGCTCCTCCAAGCCATaGTGGATTTGGATTCCTGGA +
Preference number: 2 (lower is better)
Translates to: STASLSSQILRYRYIHIYSSSKP*WIWIPG
Trigger: TCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCT...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATTGCACTCCACAACTCTaGGTTTTCAAGGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: STASLSSQILRYRYIHIYCTPQL*VFKVPS
Trigger: AGAGGGAACCTTGAAAACCCAGAGTTGTGGAGTGCA...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp CGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCTaGAGGTCCTTGGGCCAAGGCAGTGGCCTCGTCCCC +
Preference number: 3 (lower is better)
Translates to: RSPVDIEGVPQA*RSLGQGSGLVP
Trigger: GGGGACGAGGCCACTGCCTTGGCCCAAGGACCTGCAGGCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GCAGCGCCACGGGCCGCCCAGACTACAGACAAGGCCTaGCTATGCAGCCCTCACTGGCACCGCGGCCGTGAA +
Preference number: 3 (lower is better)
Translates to: AAPRAAQTTDKA*LCSPHWHRGRE
Trigger: TTCACGGCCGCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGTCTGGGCGGCCCGTGGCGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp CCACGGGCCGCCCAGACTACAGACAAGGCCTGGCTATaGAGCCCTCACTGGCACCGCGGCCGTGAAGTCAGC +
Preference number: 3 (lower is better)
Translates to: PRAAQTTDKAWL*SPHWHRGREVS
Trigger: GCTGACTTCACGGCCGCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGTCTGGGCGGCCCGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GGCGATGGCACCCGCGCAGCTTTGGGAAAGAACACTTaGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCG +
Preference number: 3 (lower is better)
Translates to: GDGTRAALGKNT*PPKGFCHPWGP
Trigger: CGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGGGTGGCACTGCGTATaGCCCTGGGGGCTAATGCCA +
Preference number: 3 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMGWHCV*PWGLMP
Trigger: TGGCATTAGCCCCCAGGGCAATACGCAGTGCCACCC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 72 bp GCAGTGAACAGGAGCTGGGGGCTCTTGGGGGCCATCTaGGCTGAGGACAGCTGGCTGTACCTCCGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: AVNRSWGLLGAI*AEDSWLYLRGH
Trigger: GTGGCCTCGGAGGTACAGCCAGCTGTCCTCAGCTCAGATGGCCCCCAAGAGCCCCCAGCTCCTGTTCACTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp GCACTGCGTATTGCCCTGGGGGCTAATGCCAGGGCCTaGTTCCAGGTAAGTCAGGTGGCTCCAGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: ALRIALGANARA*FQVSQVAPGPG
Trigger: CCCAGGGCCTGGAGCCACCTGACTTACCTGGAAGCAGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp AGCCCGCAGGCAGCCACGGCTGTTAGAGGAAGCAGATaGAGCCTCACCCCAGCCCACGTCTGTCACCACAGC +
Preference number: 3 (lower is better)
Translates to: SPQAATAVRGSR*SLTPAHVCHHS
Trigger: GCTGTGGTGACAGACGTGGGCTGGGGTGAGGCTGCATCTGCTTCCTCTAACAGCCGTGGCTGCCTGCGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GCCAGGGCCTGGCAGGCGATGGCACCCGCGCAGCTTTaGGAAAGAACACTTGGCCTCCCAAAGGGTTCTGCC +
Preference number: 3 (lower is better)
Translates to: ARAWQAMAPAQL*ERTLGLPKGSA
Trigger: GGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGAAACTCTCCTGCCGTaGGCCAAGTCACCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMETLLP*AKSPGP
Trigger: GGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp AGGGGTCAACACCTGGAGGCAAGCAGGCCAGCTCCCTaGCCCTCACACCAGCTCGGGCAGCATCTCTGCAAA +
Preference number: 3 (lower is better)
Translates to: RGQHLEASRPAP*PSHQLGQHLCK
Trigger: TTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGCAGGGAGCTGGCCTGCTTGCCTCCAGGTGTTGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GAAAGCCTCGCCAAAGACGCAGCGGCAATGAGTAGTTaGGCTGAAGGGCAGCGCCACGGGCCGCCCAGACTA +
Preference number: 3 (lower is better)
Translates to: ESLAKDAAAMSS*AEGQRHGPPRL
Trigger: TAGTCTGGGCGGCCCGTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGCTGCGTCTTTGGCGAGGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGAAACTCTCCTGCCGTaGGCCAAGTCACCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSETLLP*AKSPGP
Trigger: GGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 72 bp GCAGGTCCTTGGGCCAAGGCAGTGGCCTCGTCCCCCTaGAAACGCGGGTCGGGTGGTTTCAACAAAACCTGC +
Preference number: 3 (lower is better)
Translates to: AGPWAKAVASSP*KRGSGGFNKTC
Trigger: GCAGGTTTTGTTGAAACCACCCGACCCGCGTTTTCAGGGGGACGAGGCCACTGCCTTGGCCCAAGGACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp GCTTTGGGAAAGAACACTTGGCCTCCCAAAGGGTTCTaGCACCCCTGGGGGCCGCTACAGCCACCAACCCTG +
Preference number: 3 (lower is better)
Translates to: ALGKNTWPPKGF*HPWGPLQPPTL
Trigger: CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp TGGCTGATGAGGAAGCAGGGGAAACTCTCCTGCCGTTaGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: WLMRKQGKLSCR*PSHQGPKPGSC
Trigger: GCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTGCTTCCTCATCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 72 bp TTGGAAATGAAAGCCTCGCCAAAGACGCAGCGGCAATaGGTAGTTGGGCTGAAGGGCAGCGCCACGGGCCGC +
Preference number: 3 (lower is better)
Translates to: LEMKASPKTQRQ*VVGLKGSATGR
Trigger: GCGGCCCGTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGCTGCGTCTTTGGCGAGGCTTTCATTTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp CACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATaGCCCGTACATGTGCCTGCCCTGAGAGGAGCATGG +
Preference number: 3 (lower is better)
Translates to: HSHLFQQALCLV*PVHVPALRGAW
Trigger: CCATGCTCCTCTCAGGGCAGGCACATGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp ACAGAGCTCCTCCAAGCCATGCTGGATTTGGATTCCTaGAACCCCCTGTACCCATGCGGTGGGCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: TELLQAMLDLDS*NPLYPCGGPPQ
Trigger: CTGGGGTGGCCCACCGCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GTGGCTCCAGGCCCTGGGACTGGACAGAATGGTCTGTaGCTGATGAGGAAGCAGGGGAAACTCTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: VAPGPGTGQNGL*LMRKQGKLSCR
Trigger: ACGGCAGGAGAGTTTCCCCTGCTTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp CAGACTACAGACAAGGCCTGGCTATGCAGCCCTCACTaGCACCGCGGCCGTGAAGTCAGCTTCTCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: QTTDKAWLCSPH*HRGREVSFSSE
Trigger: CTCTGAGGAGAAGCTGACTTCACGGCCGCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp TCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTaGGGTCTTTCCATCACTTCAGACACTGAGCAGAAC +
Preference number: 3 (lower is better)
Translates to: SATPGGRYSHQP*GLSITSDTEQN
Trigger: GTTCTGCTCAGTGTCTGAAGTGATGGAAAGACCCCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAACAGGCGCTGTGCCTaGTATGCCCCGTACATGTGC +
Preference number: 3 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGNRRCA*YAPYMC
Trigger: GCACATGTACGGGGCATACAAGGCACAGCGCCTGTT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 72 bp TCCCGTCTAGTAAGTGCCAGCAGGCAGACCCACTCTTaGCAGGCTCCTAATGTCCCCACCAGCGTGCACCTG +
Preference number: 3 (lower is better)
Translates to: SRLVSASRQTHS*QAPNVPTSVHL
Trigger: CAGGTGCACGCTGGTGGGGACATTAGGAGCCTGTCAAGAGTGGGTCTGCCTGCTGGCACTTACTAGACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp CAAGTGGTGTGCTTCGCCACTGAGATGATTGTGCTGTaGCTCCGGGGCCACATAGCACCAGGGCTCGATAGC +
Preference number: 3 (lower is better)
Translates to: QVVCFATEMIVL*LRGHIAPGLDS
Trigger: GCTATCGAGCCCTGGTGCTATGTGGCCCCGGAGCCACAGCACAATCATCTCAGTGGCGAAGCACACCACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp CTTCCAGGTAAGTCAGGTGGCTCCAGGCCCTGGGACTaGACAGAATGGTCTGTGGCTGATGAGGAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: LPGKSGGSRPWD*TEWSVADEEAG
Trigger: CCCTGCTTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGAGCCACCTGACTTACCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GTAGGCCTCCCAGGAGCAGCTTGTCAGCCACATCCTTaGCAGTCCCAGGAGAGGCAGAAAAGTCTGAGGGTG +
Preference number: 3 (lower is better)
Translates to: VGLPGAACQPHP*QSQERQKSLRV
Trigger: CACCCTCAGACTTTTCTGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACAAGCTGCTCCTGGGAGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp CATGACCCCACAAGCCTAGGGACTCCGACATGCTGTTaGGGCTGCTCCCCATGGGTGTCTCAACTAGGTAGG +
Preference number: 3 (lower is better)
Translates to: HDPTSLGTPTCC*GCSPWVSQLGR
Trigger: CCTACCTAGTTGAGACACCCATGGGGAGCAGCCCCAACAGCATGTCGGAGTCCCTAGGCTTGTGGGGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCAAGCCATGCTGGATTaGGATTCCTGGAACCCCCTG +
Preference number: 3 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSQAMLD*DSWNPL
Trigger: CAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp GGCCAAGCCTCTGTCACACAGCACCCTGTGCCAGCATaGCCCGTGCTAGGGAGAAGATGCTTTTTAAGCCCT +
Preference number: 3 (lower is better)
Translates to: GQASVTQHPVPA*PVLGRRCFLSP
Trigger: AGGGCTTAAAAAGCATCTTCTCCCTAGCACGGGGCATGCTGGCACAGGGTGCTGTGTGACAGAGGCTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp GCGACCTCTCACCAACAGAGCTCCTCCAAGCCATGCTaGATTTGGATTCCTGGAACCCCCTGTACCCATGCG +
Preference number: 3 (lower is better)
Translates to: ATSHQQSSSKPC*IWIPGTPCTHA
Trigger: CGCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCTCTGTTGGTGAGAGGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGAACAGAACCAGGGTTaGACAGGCCCTGGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAEQNQG*TGPGAL
Trigger: AAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTTC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGGCACCCGCGCAGCTTaGGGAAAGAACACTTGGCCT +
Preference number: 3 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAGTRAA*GKNTWP
Trigger: AGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp AGGGCGACCTCTCACCAACAGAGCTCCTCCAAGCCATaGTGGATTTGGATTCCTGGAACCCCCTGTACCCAT +
Preference number: 3 (lower is better)
Translates to: RATSHQQSSSKP*WIWIPGTPCTH
Trigger: ATGGGTACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCTCTGTTGGTGAGAGGTCGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAACAGGCGCTGTGCCTaGTATGCCCCGTACATGTGC +
Preference number: 3 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRANRRCA*YAPYMC
Trigger: GCACATGTACGGGGCATACAAGGCACAGCGCCTGTT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTATATATTTCTTCACTaGCGGGCAGTTCCAAGGAAC +
Preference number: 3 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMYIFLH*RAVPRN
Trigger: GTTCCTTGGAACTGCCCGCAAGTGAAGAAATATATA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp GAGCGCGGTGTTGTGATCTTGGCTCACTGCAATCTCTaGCTTCTGGCTTCAAGCATTTCTCGTGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: ERGVVILAHCNL*LLASSISRASA
Trigger: GGCTGAGGCACGAGAAATGCTTGAAGCCAGAAGGCAGAGATTGCAGTGAGCCAAGATCACAACACCGCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp AACTCTGACAATGATGCTGACACGGGGGTCACTAACTaGAAGAGCAGTGAACAGGAGCTGGGGGCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: NSDNDADTGVTN*KSSEQELGALG
Trigger: CCCAAGAGCCCCCAGCTCCTGTTCACTGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGTTGTCAGCCACATCCTaGGCAGTCCCAGGAGAGGCA +
Preference number: 3 (lower is better)
Translates to: GLSITSDTEQNPERVSELLSATS*AVPGEA
Trigger: TGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACAA...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR TCA 72 bp GTCCAGCCTTTATTAGATAAAGCCACTGGGCCCATCTaGCCAGGCGAGCTCAGCTGTAAACAAGCTCGCCAG +
Preference number: 3 (lower is better)
Translates to: VQPLLDKATGPI*PGELSCKQARQ
Trigger: CTGGCGAGCTTGTTTACAGCTGAGCTCGCCTGGTCAGATGGGCCCAGTGGCTTTATCTAATAAAGGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp AAAAATCCAAGGAAACGGAACTCTACACCTCCCTGCTaGACCCAGAACCTAATACAGGGCTCCACCCCTCCC +
Preference number: 3 (lower is better)
Translates to: KNPRKRNSTPPC*TQNLIQGSTPP
Trigger: GGGAGGGGTGGAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTTGGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp CGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTaGCAATCCCACGGAATAAGAGATCTGTTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: RWPSHQGPKPGS*QSHGIRDLFSF
Trigger: AAAACTGAACAGATCTCTTATTCCGTGGGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATTTGGGAAAGAACACTaGGCCTCCCAAAGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAFGKEH*ASQRVL
Trigger: CAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR GCA 72 bp ACTAAAAATCCAAGGAAACGGAACTCTACACCTCCCTaGTGCACCCAGAACCTAATACAGGGCTCCACCCCT +
Preference number: 3 (lower is better)
Translates to: TKNPRKRNSTPP*CTQNLIQGSTP
Trigger: AGGGGTGGAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTTGGATTTTTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CCA 72 bp TTCACTTGCGGGCAGTTCCAAGGAACTGTTTGTTCCTaGACCTGTATAAAGGTCACTTTTGGGGGACACCCT +
Preference number: 3 (lower is better)
Translates to: FTCGQFQGTVCS*TCIKVTFGGHP
Trigger: AGGGTGTCCCCCAAAAGTGACCTTTATACAGGTCCAGGAACAAACAGTTCCTTGGAACTGCCCGCAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATGAACAGAACCAGGGTTaGACAGGCCCTGGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: STASLSSQILRYRYIHIYEQNQG*TGPGAL
Trigger: AAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTTC...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAAAATTAGTGCTGCCTaGTTTATAGAAAGTGGCCAT +
Preference number: 3 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAKISAA*FIESGH
Trigger: ATGGCCACTTTCTATAAACAAGGCAGCACTAATTTT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR-3UTR CAA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGAAAATTAGTGCTGCCTaGTTTATAGAAAGTGGCCAT +
Preference number: 3 (lower is better)
Translates to: GLSITSDTEQNPERVSELKISAA*FIESGH
Trigger: ATGGCCACTTTCTATAAACAAGGCAGCACTAATTTT...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCCGCTCGCCGCCCTTaGCGCGCTCGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLAARRP*RARWPA
Trigger: TGCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWAWARP*ASRAAS
Trigger: GGACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGCGAAGGCCTCGGCCTaGGCCTGGATGAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWAKASA*AWMSGP
Trigger: TGGCCCGCTCATCCAGGCGCAGGCCGAGGCCTTCGC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCCCGGGGGCGCAGCCTaGTCCGGAAGCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWPGGAA*SGSSFQ
Trigger: CTGGAAGCTGCTTCCGGAGCAGGCTGCGCCCCCGGG...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAGTCGCGGCACACACTaGCCTGCCGCTCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWSRGTH*PAARRP
Trigger: AGGGCGGCGAGCGGCAGGCCAGTGTGTGCCGCGACT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGCAGCAGCGGGCGGCTaGGCCAGGCGTCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSAAAGG*ARRRGC
Trigger: ACAGCCCCGACGCCTGGCTCAGCCGCCCGCTGCTGC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTCGGCCTGGGCCGGCTaGCCAGCACTGTCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMSAWAG*PALSSP
Trigger: CGGCGAGGACAGTGCTGGGCAGCCGGCCCAGGCCGA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGGGTTCTGCCACCCCTaGGGGCCGCTACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWGFCHP*GPLQPP
Trigger: TGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGAGCCGTGGCTGGCCTTaGAGGTGCACTCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLSRGWP*RCTRAR
Trigger: ACGGGCCCGAGTGCACCTTCAAGGCCAGCCACGGCT...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGACAGCGGCACCCCGTaGTGGCGCAGCGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMDSGTP*WRSARN
Trigger: GTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGCGAAGGCCTCGGCCTaGGCCTGGATGAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMAKASA*AWMSGP
Trigger: TGGCCCGCTCATCCAGGCGCAGGCCGAGGCCTTCGC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAGCGCTGGCTGGAGATaGCGTGGCGCTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWSAGWR*RGASAS
Trigger: GCTGGCAGAAGCGCCACGGCATCTCCAGCCAGCGCT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAGCAGCGCTCAATGCTaGCCGCCTGCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWSSAQC*PPAPGP
Trigger: GGGACCTGGTGCAGGCGGGCAGCATTGAGCGCTGCT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGGCATACTGGCAGCTaGGCTTGGGCAGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLGHTGS*AWAGRV
Trigger: CACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCCAGAGCCGCCAGGTaGGTGAGGTCGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLARAAR*VRSLST
Trigger: GGTGCTCAGCGACCTCACCCACCTGGCGGCTCTGGC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCTGGCAGAGCAGAGGTaGTGTCCCCGCCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLLAEQR*CPRLGG
Trigger: GCCCCCAAGGCGGGGACACCACCTCTGCTCTGCCAG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCGGCCTGCGCCTGGATaGGCGGGCCAGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPRPAPG*AGQTAA
Trigger: TGCCGCTGTCTGGCCCGCTCATCCAGGCGCAGGCCG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGCAGCAGCGGGCGGCTaGGCCAGGCGTCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSAAAGG*ARRRGC
Trigger: ACAGCCCCGACGCCTGGCTCAGCCGCCCGCTGCTGC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCCCCCAGGGTGCCAGTaGGGCAGGGCGACCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSPPGCQ*GRATSH
Trigger: GTGAGAGGTCGCCCTGCCTCACTGGCACCCTGGGGG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCTCTTGGGGGCCATCTaGGCTGAGGACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWLLGAI*AEDSWL
Trigger: CAGCCAGCTGTCCTCAGCTCAGATGGCCCCCAAGAG...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCGGCACACACTGGCCTaGCGCTCGCCGCCCTTGACG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSRHTLA*RSPPLT
Trigger: CGTCAAGGGCGGCGAGCGGCAGGCCAGTGTGTGCCG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGACAGCGGCACCCCGTaGTGGCGCAGCGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMDSGTP*WRSARN
Trigger: GTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGCGGCCACCACGCCCTaGTCCAGCGGTGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMAATTP*SSGAGI
Trigger: TATCCCCGCACCGCTGGAGCAGGGCGTGGTGGCCGC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCCAGCAGCGCTCAATaGTGCCCGCCTGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLASSAQ*CPPAPG
Trigger: ACCTGGTGCAGGCGGGCAGCATTGAGCGCTGCTGGC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGCCAGAGGCTCTTCCTaGAGGTGGCGGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWARGSS*RWRWPD
Trigger: ATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCGCCTTGGGGGCCTGTaGCCCTGGGAAGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSRLGGL*PWEGAG
Trigger: GCCAGCACCTTCCCAGGGGCACAGGCCCCCAAGGCG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTCATCCGCAGCCCAGTaGACATCGAGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLSSAAQ*TSRGSP
Trigger: GGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGCCGCTCGCCGCCCTTaGCGCGCTCGATGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSAARRP*RARWPA
Trigger: TGCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCGGCCTGCGCCTGGATaGGCGGGCCAGACAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWRPAPG*AGQTAA
Trigger: TGCCGCTGTCTGGCCCGCTCATCCAGGCGCAGGCCG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCCGGCAGCCGCCCGATaGCCAGCGGCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMPAAAR*PAASAC
Trigger: ACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCCCCCAGGGTGCCAGTaGGGCAGGGCGACCTCTCAC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPPPGCQ*GRATSH
Trigger: GTGAGAGGTCGCCCTGCCTCACTGGCACCCTGGGGG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCTGGAGCTGCTGCCCTaGGCTCTGCTCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLLELLP*ALLRES
Trigger: AGACTCCCTGAGCAGAGCTCAGGGCAGCAGCTCCAG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCCACAGCCACCCCGATaGGAGGAGCGGGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPPQPPR*EERACP
Trigger: AGGGCAGGCCCGCTCCTCTCATCGGGGTGGCTGTGG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGCCCTCAACAGAGCATaGCCCCACAAGCCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWALNRA*PHKPRD
Trigger: GTCCCTAGGCTTGTGGGGTCATGCTCTGTTGAGGGC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGAGCAGCACGGCCTTCTaGTGCAGGCAGCTTCGGCGC +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMSSTAF*CRQLRR
Trigger: GCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCTGCT...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCGAGGGGCTCCGGCCTaGACCGCACGGGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERGAPA*TARGHP
Trigger: AGGATGCCCCCGTGCGGTGCAGGCCGGAGCCCCTCG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGCGCCATCCGGTGTCTaGAGCTCCTCCGGGGGACCG +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPAPSGV*SSSGGP
Trigger: CGGTCCCCCGGAGGAGCTGCAGACACCGGATGGCGC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCAACCCCCTGTACCCATaGGGTGGGCCACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSNPLYP*GGPPQG
Trigger: CCCCTGGGGTGGCCCACCGCATGGGTACAGGGGGTT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCCCTTCCCTTCCCCGTaGAGGCCTCCAGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMPFPSP*RPPAYP
Trigger: GGGGTAGGCTGGAGGCCTGCACGGGGAAGGGAAGGG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAGGCATGCCTGGAGCTaGTGCCCTGAGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWRHAWS*CPELCS
Trigger: TGAGCAGAGCTCAGGGCAGCAGCTCCAGGCATGCCT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGCCTCGGCCTGCGCCTaGATGAGCGGGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPASACA*MSGPDS
Trigger: GCTGTCTGGCCCGCTCATCCAGGCGCAGGCCGAGGC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTTGTCCTGGTTGTGGTaGCGCAGGCTGGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMLSWLW*RRLGGS
Trigger: GGACCCGCCCAGCCTGCGCCACCACAACCAGGACAA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGAACTTGTCCTGGTTGTaGTGGCGCAGGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLNLSWL*WRRLGG
Trigger: CCCGCCCAGCCTGCGCCACCACAACCAGGACAAGTT...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCCAGCGGGGAGCCGCTaGCGCAGGACACAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPPAGSR*RRTQPV
Trigger: GACTGGCTGTGTCCTGCGCCAGCGGCTCCCCGCTGG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGTGGCCCCACCTCTCTaGGGTCCTGGTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMVAPPL*GPGSPA
Trigger: GGCTGGAGAACCAGGACCCCAGAGAGGTGGGGCCAC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTCCTGCAGGTGGCGGTaGCCTGATGGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMSCRWR*PDGLSR
Trigger: CCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp GTGGGGAGGAGAGCCCACAGAGGGTGGCACTGCGTATaGCCCTGGGGGCTAATGCCAGGGCCTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGRRAHRGWHCV*PWGLMPGPASR
Trigger: CCTGGAAGCAGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTGCCACCCTCTGTGGGCTCTCCTCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTAGCCGTGGCTGGCCTTaGAGGTGCACTCGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPSRGWP*RCTRAR
Trigger: ACGGGCCCGAGTGCACCTTCAAGGCCAGCCACGGCT...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGCTTGTACAGCTGTTTaGAGGCGGCCACCACGCCCT +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLACTAV*RRPPRP
Trigger: AGGGCGTGGTGGCCGCCTTCAAACAGCTGTACAAGC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCTCGTCCAGTGCATGTaGCTGGTGCAGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMLVQCM*LVQGRR
Trigger: CCTCCGCCCCTGCACCAGTCACATGCACTGGACGAG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCACAGCCACCCCGATaGGAGGAGCGGGCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPQPPR*EERACP
Trigger: AGGGCAGGCCCGCTCCTCTCATCGGGGTGGCTGTGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGACGCGCTCGATGGCCTaGAGCTTGTCCTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWTRSMA*SLSLME
Trigger: CTCCATCAAGGACAAGCTGCAGGCCATCGAGCGCGT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCGGCACACACTGGCCTaGCGCTCGCCGCCCTTGACG +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERHTLA*RSPPLT
Trigger: CGTCAAGGGCGGCGAGCGGCAGGCCAGTGTGTGCCG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTCTTCTTGCGCTGAGTaGCCACCTCACCGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLSSCAE*PPHRPA
Trigger: AGCTGGGCGGTGAGGTGGGCACTCAGCGCAAGAAGA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCATGCCGTGGCGCTTCTaGCAGCGCCAGAACCAGCCG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSMPWRF*QRQNQP
Trigger: CGGCTGGTTCTGGCGCTGGCAGAAGCGCCACGGCAT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAGCAGCACGGCCTTCTaGTGCAGGCAGCTTCGGCGC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMSSTAF*CRQLRR
Trigger: GCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCTGCT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCCATCATCGTCCAGGTaGAGCCACTCCGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLPSSSR*SHSATS
Trigger: GGAGGTTGCGGAGTGGCTGCACCTGGACGATGATGG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCACAGAGGGTGGCACTaGGTATTGCCCTGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLHRGWH*VLPWGL
Trigger: TAGCCCCCAGGGCAATACGCAGTGCCACCCTCTGTG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCCTCCCAAAGGGTTCTaGCACCCCTGGGGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSPPKGF*HPWGPL
Trigger: TAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGAGTCGCGGCACACACTaGCCTGCCGCTCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWSRGTH*PAARRP
Trigger: AGGGCGGCGAGCGGCAGGCCAGTGTGTGCCGCGACT...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGCCTCGGCCTGCGCCTaGATGAGCGGGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSASACA*MSGPDS
Trigger: GCTGTCTGGCCCGCTCATCCAGGCGCAGGCCGAGGC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTGGCTGGAGATGCCGTaGCGCTTCTGCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMWLEMP*RFCQRQ
Trigger: CTGGCGCTGGCAGAAGCGCCACGGCATCTCCAGCCA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCGTAGAAGCGCTGGCTaGAGATGCCGTGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLRRSAG*RCRGAS
Trigger: AGAAGCGCCACGGCATCTCCAGCCAGCGCTTCTACG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCAGCGGGGAGCCGCTaGCGCAGGACACAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPAGSR*RRTQPV
Trigger: GACTGGCTGTGTCCTGCGCCAGCGGCTCCCCGCTGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGCGGCTTCCTCGGCCTaGGCCGGCTGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTAASSA*AGCPAL
Trigger: CAGTGCTGGGCAGCCGGCCCAGGCCGAGGAAGCCGC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGAGAGGGCAGACTGGCTaGGGCCGGAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERGQTG*GRRRCR
Trigger: CCTGCAGCGCCTCCGGCCCCAGCCAGTCTGCCCTCT...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCTGCACCAGCCTCAGTaGCCCCACCTCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMLHQPQ*PHLSGV
Trigger: GACCCCAGAGAGGTGGGGCCACTGAGGCTGGTGCAG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGAAAGGTCACTGGGCTaGCCTGGTCACACACCGTCA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWERSLG*PGHTPS
Trigger: TGACGGTGTGTGACCAGGCCAGCCCAGTGACCTTTC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCCTGTACCCATGCGGTaGGCCACCCCAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEPVPMR*ATPGGG
Trigger: CCCTCCCCCTGGGGTGGCCCACCGCATGGGTACAGG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCTGTACCCATGCGGTaGGCCACCCCAGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPVPMR*ATPGGG
Trigger: CCCTCCCCCTGGGGTGGCCCACCGCATGGGTACAGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAAACTCTCCTGCCGTTaGCCAAGTCACCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWKLSCR*PSHQGP
Trigger: TGGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCTGGCAGAGCAGAGGTaGTGTCCCCGCCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPLAEQR*CPRLGG
Trigger: GCCCCCAAGGCGGGGACACCACCTCTGCTCTGCCAG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTCAGGGATCCATGGCTaGCACTGCCCACAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMSGIHG*HCPQGQ
Trigger: CTGGCCCTGTGGGCAGTGCCAGCCATGGATCCCTGA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGGGTTCTGCCACCCCTaGGGGCCGCTACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPGFCHP*GPLQPP
Trigger: TGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGGGCCTGGCAGGCGATaGCACCCGCGCAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWGPGRR*HPRSFG
Trigger: CCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGTGGGGCTGCTCCCCATaGGTGTCTCAACTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWWGCSP*VSQLGR
Trigger: CCTACCTAGTTGAGACACCCATGGGGAGCAGCCCCA...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp AGGCGATGGCACCCGCGCAGCTTTGGGAAAGAACACTaGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RRWHPRSFGKEH*ASQRVLPPLGA
Trigger: GGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGGTGTGCTTCGCCACTaGGATGATTGTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWGVLRH*DDCAVA
Trigger: AGCCACAGCACAATCATCTCAGTGGCGAAGCACACC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCTGGAGCTGCTGCCCTaGGCTCTGCTCAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSLELLP*ALLRES
Trigger: AGACTCCCTGAGCAGAGCTCAGGGCAGCAGCTCCAG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGGGGCCATCTGAGCTaGGGACAGCTGGCTGTACCT +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMGGHLS*GQLAVP
Trigger: AGGTACAGCCAGCTGTCCTCAGCTCAGATGGCCCCC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGGGGGCCATCTGAGCTaGGGACAGCTGGCTGTACCT +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSGGHLS*GQLAVP
Trigger: AGGTACAGCCAGCTGTCCTCAGCTCAGATGGCCCCC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGTGGCCTCGTCCCCCTaGAAACGCGGGTCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWVASSP*KRGSGG
Trigger: ACCACCCGACCCGCGTTTTCAGGGGGACGAGGCCAC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGACGAGGGGCTCCGGCCTaGACCGCACGGGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRRGAPA*TARGHP
Trigger: AGGATGCCCCCGTGCGGTGCAGGCCGGAGCCCCTCG...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGATCGGCCTGGGCCGGCTaGCCAGCACTGTCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRSAWAG*PALSSP
Trigger: CGGCGAGGACAGTGCTGGGCAGCCGGCCCAGGCCGA...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCCTCTCTTCCAGCTGTaGCCCCAGGGTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMPLFQL*PQGASE
Trigger: CTCACTGGCACCCTGGGGGCACAGCTGGAAGAGAGG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTAGTGCATGTGACTGGTaGAGGGGCGGAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPSACDW*RGGGPA
Trigger: GGCTGGGCCTCCGCCCCTGCACCAGTCACATGCACT...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCCTTCCCTTCCCCGTaGAGGCCTCCAGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPFPSP*RPPAYP
Trigger: GGGGTAGGCTGGAGGCCTGCACGGGGAAGGGAAGGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGAATGTGCAGAATCTaGCAGAGCGGAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLGMCRI*QSGGQS
Trigger: GCTCTGGCCTCCGCTCTGGCAGATTCTGCACATTCC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCGATCTCCTCCTCGTTaGCCAGCCGCATCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLRSPPR*PAASSC
Trigger: GCAAGAAGATGCGGCTGGCCAACGAGGAGGAGATCG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCCAGGGCGGGCATACTaGCAGCTGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGPGRAY*QLGLGR
Trigger: CCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGG...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGCCAGAGCCGCCAGGTaGGTGAGGTCGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWARAAR*VRSLST
Trigger: GGTGCTCAGCGACCTCACCCACCTGGCGGCTCTGGC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAAAGGTCACTGGGCTaGCCTGGTCACACACCGTCA +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLERSLG*PGHTPS
Trigger: TGACGGTGTGTGACCAGGCCAGCCCAGTGACCTTTC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGAGATGATTGTGCTGTaGCTCCGGGGCCACATAGCA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWEMIVL*LRGHIA
Trigger: TGCTATGTGGCCCCGGAGCCACAGCACAATCATCTC...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGAAACTCTCCTGCCGTTaGCCAAGTCACCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLKLSCR*PSHQGP
Trigger: TGGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTT...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGCACTGCGTATTGCCCTaGGGGCTAATGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMHCVLP*GLMPGP
Trigger: AGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTG...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTGTCAGCCACATCCTTaGCAGTCCCAGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLCQPHP*QSQERQ
Trigger: CTGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCGAGGGGTCAACACCTaGAGGCAAGCAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSRGVNT*RQAGQL
Trigger: GAGCTGGCCTGCTTGCCTCCAGGTGTTGACCCCTCG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTTCCTGCAGGTGGCGGTaGCCTGATGGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPSCRWR*PDGLSR
Trigger: CCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGA...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCTCAGGGATCCATGGCTaGCACTGCCCACAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSSGIHG*HCPQGQ
Trigger: CTGGCCCTGTGGGCAGTGCCAGCCATGGATCCCTGA...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGCAGTGAACAGGAGCTaGGGGCTCTTGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMAVNRS*GLLGAI
Trigger: GATGGCCCCCAAGAGCCCCCAGCTCCTGTTCACTGC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAAGCCTGCAGGTCCTTaGGCCAAGGCAGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMKPAGP*AKAVAS
Trigger: CGAGGCCACTGCCTTGGCCCAAGGACCTGCAGGCTT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp AGCCAGGGCCTGGCAGGCGATGGCACCCGCGCAGCTTaGGGAAAGAACACTTGGCCTCCCAAAGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SQGLAGDGTRAA*GKNTWPPKGFC
Trigger: GCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRAWARP*ASRAAS
Trigger: GGACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGGCGCAGGTAGCGTTTaGCGCCTGGGACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMGAGSV*RLGQIP
Trigger: AGGAATTTGTCCCAGGCGTCAAACGCTACCTGCGCC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCCCGGCAGTCGGCACTaGGGTCCCTCCATAGTCGGT +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEPGSRH*GPSIVG
Trigger: ACCGACTATGGAGGGACCTCAGTGCCGACTGCCGGG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGGCCATGCTGATGAGTaGGCGCAACTGCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSGHADE*AQLHQP
Trigger: AGGCTGGTGCAGTTGCGCTCACTCATCAGCATGGCC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCTGGCACCGCGGCCGTaGAGTCAGCTTCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPLAPRP*SQLLLR
Trigger: TCTGAGGAGAAGCTGACTTCACGGCCGCGGTGCCAG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGTGGCCTCGTCCCCCTaGAAACGCGGGTCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTVASSP*KRGSGG
Trigger: ACCACCCGACCCGCGTTTTCAGGGGGACGAGGCCAC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCACCTCACCGCCCAGCTaGTCCAGGAACCAGCGCAGC +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGTSPPS*SRNQRS
Trigger: GCTGCGCTGGTTCCTGGAGCAGCTGGGCGGTGAGGT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAGCGCTGGCTGGAGATaGCGTGGCGCTTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSSAGWR*RGASAS
Trigger: GCTGGCAGAAGCGCCACGGCATCTCCAGCCAGCGCT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGCTTCAGCTTGTGGCTaGCGGTCAGGTTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMASACG*RSGLRP
Trigger: TGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAGCACGGCCTTCTGCTaGAGGCAGCTTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGSTAFC*RQLRRR
Trigger: CCTGCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGAGCACGGCCTTCTGCTaGAGGCAGCTTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEESTAFC*RQLRRR
Trigger: CCTGCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCT...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGCGGCCACCACGCCCTaGTCCAGCGGTGCGGGGATA +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRAATTP*SSGAGI
Trigger: TATCCCCGCACCGCTGGAGCAGGGCGTGGTGGCCGC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGAGCAGCGCTCAATGCTaGCCGCCTGCACCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEESSAQC*PPAPGP
Trigger: GGGACCTGGTGCAGGCGGGCAGCATTGAGCGCTGCT...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGCCAGCAGCGCTCAATaGTGCCCGCCTGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEASSAQ*CPPAPG
Trigger: ACCTGGTGCAGGCGGGCAGCATTGAGCGCTGCTGGC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAGTGCATGTGACTGGTaGAGGGGCGGAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGSACDW*RGGGPA
Trigger: GGCTGGGCCTCCGCCCCTGCACCAGTCACATGCACT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGTTAGAGGAAGCAGATaGAGCCTCACCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMVRGSR*SLTPAH
Trigger: GTGGGCTGGGGTGAGGCTGCATCTGCTTCCTCTAAC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGACCCACCCCTGCGCCTaGAGGGAATGTGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMTHPCA*RECAES
Trigger: AGATTCTGCACATTCCCTGCAGGCGCAGGGGTGGGT...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGGGGTCCCCCAAGCCTaGAGGTCCTTGGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTGVPQA*RSLGQG
Trigger: GCCTTGGCCCAAGGACCTGCAGGCTTGGGGGACCCC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCTAGGGACTCCGACATaGTGTTGGGGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSLGTPT*CWGCSP
Trigger: TGGGGAGCAGCCCCAACAGCATGTCGGAGTCCCTAG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGTCATAGGGGCCTGCTaGGGTATGCCCGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGVIGAC*GMPDAP
Trigger: GGGGGCATCGGGCATACCCCAGCAGGCCCCTATGAC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGTCATAGGGGCCTGCTaGGGTATGCCCGATGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWVIGAC*GMPDAP
Trigger: GGGGGCATCGGGCATACCCCAGCAGGCCCCTATGAC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCACTGCGTATTGCCCTaGGGGCTAATGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMHCVLP*GLMPGP
Trigger: AGGCCCTGGCATTAGCCCCCAGGGCAATACGCAGTG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGGCTCTTCCTGCAGGTaGCGGTGGCCTGATGGGCTC +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGGSSCR*RWPDGL
Trigger: GAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCTTGGGCCAAGGCAGTaGCCTCGTCCCCCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMLGPRQ*PRPPEN
Trigger: GTTTTCAGGGGGACGAGGCCACTGCCTTGGCCCAAG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCTCATCCGCAGCCCAGTaGACATCGAGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSSSAAQ*TSRGSP
Trigger: GGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGA...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCACTCCGACATGCTGTTaGGGCTGCTCCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSTPTCC*GCSPWV
Trigger: CACCCATGGGGAGCAGCCCCAACAGCATGTCGGAGT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGTACATGTGCCTGCCCTaGGAGGAGCATGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEYMCLP*EEHGPG
Trigger: GCCTGGCCCATGCTCCTCTCAGGGCAGGCACATGTA...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGCTTCGCCACTGAGATaGTTGTGCTGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPASPLR*LCCGSG
Trigger: CCCGGAGCCACAGCACAATCATCTCAGTGGCGAAGC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCTGGCACCGCGGCCGTaGAGTCAGCTTCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGLAPRP*SQLLLR
Trigger: TCTGAGGAGAAGCTGACTTCACGGCCGCGGTGCCAG...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAAGACGCAGCGGCAATaGGTAGTTGGGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMKTQRQ*VVGLKG
Trigger: GCCCTTCAGCCCAACTACTCATTGCCGCTGCGTCTT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCTCTTGGGGGCCATCTaGGCTGAGGACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGLLGAI*AEDSWL
Trigger: CAGCCAGCTGTCCTCAGCTCAGATGGCCCCCAAGAG...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCACGCGCTCGATGGCCTaGAGCTTGTCCTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSTRSMA*SLSLME
Trigger: CTCCATCAAGGACAAGCTGCAGGCCATCGAGCGCGT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGCTGCCGGTCAGGTTTaGGGCCAGCAGCACCGTTAC +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGAAGQV*GQQHRY
Trigger: GTAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCGGTGCGGGGATATGTaGCCGGCTGCTGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGRCGDM*PAAAFG
Trigger: TCCAAAGGCAGCAGCCGGGCACATATCCCCGCACCG...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGACTGAGCACCCTGCTGTaGTCGGCGGCTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRLSTLL*SAASSA
Trigger: GGCCGAGGAAGCCGCCGAGCACAGCAGGGTGCTCAG...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTCCCCTCCCTCCAAGTaGAGCAGGAGAAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMSPPSK*SRRKVT
Trigger: AGTGACCTTTCTCCTGCTGCACTTGGAGGGAGGGGA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAAACCCCCTGTACCCATaGGGTGGGCCACCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRNPLYP*GGPPQG
Trigger: CCCCTGGGGTGGCCCACCGCATGGGTACAGGGGGTT...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCCCCGTACATGTGCCTaGCCTGAGAGGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSPRTCA*PERSMG
Trigger: GCCCATGCTCCTCTCAGGGCAGGCACATGTACGGGG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCCAGGGGAAACTCTCCTaGCGTTGGCCAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSQGKLS*RWPSHQ
Trigger: CTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTG...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCCACTGCCAAGCTGGTaGACAGCCCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEPLPSW*TALPFP
Trigger: GGGGAAGGGAAGGGCTGTGCACCAGCTTGGCAGTGG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCCACTGCCAAGCTGGTaGACAGCCCTTCCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSPLPSW*TALPFP
Trigger: GGGGAAGGGAAGGGCTGTGCACCAGCTTGGCAGTGG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACACTCCAGCTGCCCCACTaGCAAGCTGGTGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTLQLPH*QAGAQP
Trigger: GGGCTGTGCACCAGCTTGGCAGTGGGGCAGCTGGAG...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGCCAGAGGCTCTTCCTaGAGGTGGCGGTGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGARGSS*RWRWPD
Trigger: ATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCACCCTGTGCCAGCATaGCCCGTGCTAGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPHPVPA*PVLGRR
Trigger: TCTTCTCCCTAGCACGGGGCATGCTGGCACAGGGTG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGGAATGTGCAGAATCTaGCAGAGCGGAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSGMCRI*QSGGQS
Trigger: GCTCTGGCCTCCGCTCTGGCAGATTCTGCACATTCC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCACCCACCCCTGCGCCTaGAGGGAATGTGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSTHPCA*RECAES
Trigger: AGATTCTGCACATTCCCTGCAGGCGCAGGGGTGGGT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAAGCCATGCTGGATTTaGATTCCTGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWKPCWI*IPGTPC
Trigger: ACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTGTCAGCCACATCCTTaGCAGTCCCAGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMCQPHP*QSQERQ
Trigger: CTGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCTCCTAGGAGGACACTaGGGGCAGATGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSLLGGH*GQMGTR
Trigger: CCTCGTCCCCATCTGCCCCCAGTGTCCTCCTAGGAG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCTATGCAGCCCTCACTaGCACCGCGGCCGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSLCSPH*HRGREV
Trigger: GACTTCACGGCCGCGGTGCCAGTGAGGGCTGCATAG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCGACACCAGCCTCCTaGGACCCGGGCCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPTPAS*DPGQQK
Trigger: CTTTTGTTGGCCCGGGTCCCAGGAGGCTGGTGTCGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGTTGGGAAAGAACACTTaGCCTCCCAAAGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWLGKNT*PPKGFC
Trigger: GCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAA...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGCAGTGAACAGGAGCTaGGGGCTCTTGGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEAVNRS*GLLGAI
Trigger: GATGGCCCCCAAGAGCCCCCAGCTCCTGTTCACTGC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCAAGCCTGCAGGTCCTTaGGCCAAGGCAGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSKPAGP*AKAVAS
Trigger: CGAGGCCACTGCCTTGGCCCAAGGACCTGCAGGCTT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp GTGGCTGATGAGGAAGCAGGGGAAACTCTCCTGCCGTaGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VADEEAGETLLP*AKSPGPKARQL
Trigger: CAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTGCTTCCTCATCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGGCGCAGGTAGCGTTTaGCGCCTGGGACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPGAGSV*RLGQIP
Trigger: AGGAATTTGTCCCAGGCGTCAAACGCTACCTGCGCC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGCTTGTACAGCTGTTTaGAGGCGGCCACCACGCCCT +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEACTAV*RRPPRP
Trigger: AGGGCGTGGTGGCCGCCTTCAAACAGCTGTACAAGC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGCTTCGCCACTGAGATaGTTGTGCTGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGASPLR*LCCGSG
Trigger: CCCGGAGCCACAGCACAATCATCTCAGTGGCGAAGC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGCCCTCAACAGAGCATaGCCCCACAAGCCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSALNRA*PHKPRD
Trigger: GTCCCTAGGCTTGTGGGGTCATGCTCTGTTGAGGGC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCTCTTCTTGCGCTGAGTaGCCACCTCACCGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGSSCAE*PPHRPA
Trigger: AGCTGGGCGGTGAGGTGGGCACTCAGCGCAAGAAGA...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACACGGTGCGGGGATATGTaGCCGGCTGCTGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTRCGDM*PAAAFG
Trigger: TCCAAAGGCAGCAGCCGGGCACATATCCCCGCACCG...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGATGAGTGAGCGCAACTaGACCAGCCTCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEMSERN*TSLSGP
Trigger: GGGGCCACTGAGGCTGGTGCAGTTGCGCTCACTCAT...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCATGAGTGAGCGCAACTaGACCAGCCTCAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSMSERN*TSLSGP
Trigger: GGGGCCACTGAGGCTGGTGCAGTTGCGCTCACTCAT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACTGGGGTATGCCCGATaGCCCCCAGCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRALGYAR*PPASGP
Trigger: TGGCCCGGAGGCTGGGGGGCATCGGGCATACCCCAG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCCTGGGGTATGCCCGATaGCCCCCAGCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLLGYAR*PPASGP
Trigger: TGGCCCGGAGGCTGGGGGGCATCGGGCATACCCCAG...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAACCGTCATAGGGGCCTaGTGGGGTATGCCCGATGCC +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTTVIGA*WGMPDA
Trigger: GGCATCGGGCATACCCCAGCAGGCCCCTATGACGGT...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACACCTCTCTTCCAGCTGTaGCCCCAGGGTGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTPLFQL*PQGASE
Trigger: CTCACTGGCACCCTGGGGGCACAGCTGGAAGAGAGG...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGCGCTGTGCCTTGTATaGCCCGTACATGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWALCLV*PVHVPA
Trigger: GGCAGGCACATGTACGGGGCATACAAGGCACAGCGC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGAACTCTACACCTCCCTaGTGCACCCAGAACCTAATA +
Preference number: 4 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWNSTPP*CTQNLI
Trigger: TATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTT...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGCTAATGCCAGGGCCTaGTTCCAGGTAAGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSANARA*FQVSQV
Trigger: CACCTGACTTACCTGGAAGCAGGCCCTGGCATTAGC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGTGCCCCTGGGAAGGTaGTGGCCCAAATGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGVPLGR*WPKCLR
Trigger: CCTGAGACATTTGGGCCAGCACCTTCCCAGGGGCAC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGTGCCCCTGGGAAGGTaGTGGCCCAAATGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWVPLGR*WPKCLR
Trigger: CCTGAGACATTTGGGCCAGCACCTTCCCAGGGGCAC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACGCCTTGGGGGCCTGTaGCCCTGGGAAGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRARLGGL*PWEGAG
Trigger: GCCAGCACCTTCCCAGGGGCACAGGCCCCCAAGGCG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCTTCCCGTCTAGTAAGTaGCAGCAGGCAGACCCACTC +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSFPSSK*QQADPL
Trigger: GAGTGGGTCTGCCTGCTGGCACTTACTAGACGGGAA...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTTCCCGTCTAGTAAGTaGCAGCAGGCAGACCCACTC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMFPSSK*QQADPL
Trigger: GAGTGGGTCTGCCTGCTGGCACTTACTAGACGGGAA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCACCCTGTGCCAGCATaGCCCGTGCTAGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWHPVPA*PVLGRR
Trigger: TCTTCTCCCTAGCACGGGGCATGCTGGCACAGGGTG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCACATGCTGTTGGGGCTaGTCCCCATGGGTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSTCCWG*SPWVSQ
Trigger: TTGAGACACCCATGGGGAGCAGCCCCAACAGCATGT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCTAGGGACTCCGACATaGTGTTGGGGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEELGTPT*CWGCSP
Trigger: TGGGGAGCAGCCCCAACAGCATGTCGGAGTCCCTAG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAAGCGGCACCCCGTGCTaGCGCAGCGCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRASGTPC*RSARNQ
Trigger: CTGGTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGATGGCTGGAGATGCCGTaGCGCTTCTGCCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRWLEMP*RFCQRQ
Trigger: CTGGCGCTGGCAGAAGCGCCACGGCATCTCCAGCCA...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCGTAGAAGCGCTGGCTaGAGATGCCGTGGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERRSAG*RCRGAS
Trigger: AGAAGCGCCACGGCATCTCCAGCCAGCGCTTCTACG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGCCGGGAACTTGTCCTaGTTGTGGTGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTAGNLS*LWWRRL
Trigger: CAGCCTGCGCCACCACAACCAGGACAAGTTCCCGGC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGCGGCTTCCTCGGCCTaGGCCGGCTGCCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELAASSA*AGCPAL
Trigger: CAGTGCTGGGCAGCCGGCCCAGGCCGAGGAAGCCGC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAGAGGGCAGACTGGCTaGGGCCGGAGGCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLRGQTG*GRRRCR
Trigger: CCTGCAGCGCCTCCGGCCCCAGCCAGTCTGCCCTCT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGTCACTGGGCTGGCCTaGTCACACACCGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSVTGLA*SHTVIG
Trigger: CCCTATGACGGTGTGTGACCAGGCCAGCCCAGTGAC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGTCCTCCAAGCCATGCTaGATTTGGATTCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLSSKPC*IWIPGT
Trigger: GGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGA...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCGGACAGAATGGTCTGTaGCTGATGAGGAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSGQNGL*LMRKQG
Trigger: CCCCTGCTTCCTCATCAGCCACAGACCATTCTGTCC...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGAGAGCCCACAGAGGGTaGCACTGCGTATTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERAHRG*HCVLPW
Trigger: CCAGGGCAATACGCAGTGCCACCCTCTGTGGGCTCT...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGCGGCAATGAGTAGTTaGGCTGAAGGGCAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEAAMSS*AEGQRH
Trigger: GTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCTTGGGCCAAGGCAGTaGCCTCGTCCCCCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEELGPRQ*PRPPEN
Trigger: GTTTTCAGGGGGACGAGGCCACTGCCTTGGCCCAAG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGTCCAGTAGAGGCCGGTaGCGCTGGCGCTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEESSRGR*RWRCKS
Trigger: AGATTTACAGCGCCAGCGTCACCGGCCTCTACTGGA...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCTCCAGTAGAGGCCGGTaGCGCTGGCGCTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSSSRGR*RWRCKS
Trigger: AGATTTACAGCGCCAGCGTCACCGGCCTCTACTGGA...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACCGGCAGCCGCCCGATaGCCAGCGGCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAPAAAR*PAASAC
Trigger: ACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAACAGAACCAGGGTTTaGCAGGCCCTGGGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGNRTRV*QALGPF
Trigger: AAAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGAAGACGCAGCGGCAATaGGTAGTTGGGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWKTQRQ*VVGLKG
Trigger: GCCCTTCAGCCCAACTACTCATTGCCGCTGCGTCTT...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGAAGAAAGGTTGGAAATaGAAGCCTCGCCAAAGACGC +
Preference number: 4 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLKKGWK*KPRQRR
Trigger: GCGTCTTTGGCGAGGCTTTCATTTCCAACCTTTCTT...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCATAGAAAGTGGCCATTaGGGGACTGGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSIESGH*GTGGQA
Trigger: GGCCTGTCCCCCAGTCCCTCAATGGCCACTTTCTAT...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACACGTGCCTCAGCCTCCTaGGTAGCTAGGGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTRASAS*VARVTG
Trigger: GCCTGTAACCCTAGCTACTCAGGAGGCTGAGGCACG...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAGGCAGACCCACTCTTaGCAGGCTCCTAATGTCCCC +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGRQTHS*QAPNVP
Trigger: GGGGACATTAGGAGCCTGTCAAGAGTGGGTCTGCCT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGGATATGTGCCCGGCTaGTGCCTTTGGACAGGAACA +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPGYVPG*CLWTGT
Trigger: TGTTCCTGTCCAAAGGCAGCAGCCGGGCACATATCC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGCGCTGTGCCTTGTATaGCCCGTACATGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTALCLV*PVHVPA
Trigger: GGCAGGCACATGTACGGGGCATACAAGGCACAGCGC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCAGGGGAAACTCTCCTaGCGTTGGCCAAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGQGKLS*RWPSHQ
Trigger: CTGGTGACTTGGCCAACGGCAGGAGAGTTTCCCCTG...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGACAAGGCCTGGCTATaGAGCCCTCACTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRDKAWL*SPHWHR
Trigger: GCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCGCCTGCAGGGAATGTaGAGAATCTGCCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWRLQGM*RICQSG
Trigger: TCCGCTCTGGCAGATTCTGCACATTCCCTGCAGGCG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCGATCTCCTCCTCGTTaGCCAGCCGCATCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERSPPR*PAASSC
Trigger: GCAAGAAGATGCGGCTGGCCAACGAGGAGGAGATCG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGACGCCAGAACCAGCCGTaGCTGGCCTTGAAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRRQNQP*LALKVH
Trigger: GTGCACCTTCAAGGCCAGCCACGGCTGGTTCTGGCG...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAAACTTGTCCTGGTTGTaGTGGCGCAGGCTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRNLSWL*WRRLGG
Trigger: CCCGCCCAGCCTGCGCCACCACAACCAGGACAAGTT...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGGGTTTGACAGGCCCTaGGGCCCTTTCCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWGFDRP*GPFLLS
Trigger: TGAAAGGAGGAAAGGGCCCCAGGGCCTGTCAAACCC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGACGAGGGGTCAACACCTaGAGGCAAGCAGGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRRGVNT*RQAGQL
Trigger: GAGCTGGCCTGCTTGCCTCCAGGTGTTGACCCCTCG...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGGTCTCAGGGATCCATaGCTGGCACTGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRGLRDP*LALPTG
Trigger: CCCTGTGGGCAGTGCCAGCCATGGATCCCTGAGACC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTTGGGAAAGAACACTTaGCCTCCCAAAGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMLGKNT*PPKGFC
Trigger: GCAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGGGCCTGGCAGGCGATaGCACCCGCGCAGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELGPGRR*HPRSFG
Trigger: CCCAAAGCTGCGCGGGTGCCATCGCCTGCCAGGCCC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACTCGTCCAGTGCATGTaGCTGGTGCAGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRALVQCM*LVQGRR
Trigger: CCTCCGCCCCTGCACCAGTCACATGCACTGGACGAG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCGCCACTGGGCCCATCTaGCCAGGCGAGCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLATGPI*PGELSC
Trigger: ACAGCTGAGCTCGCCTGGTCAGATGGGCCCAGTGGC...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAATGCCGTGGCGCTTCTaGCAGCGCCAGAACCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAMPWRF*QRQNQP
Trigger: CGGCTGGTTCTGGCGCTGGCAGAAGCGCCACGGCAT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCTATGTGCCCGGCTGCTaGCTTTGGACAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSYVPGC*LWTGTA
Trigger: TGCTGTTCCTGTCCAAAGGCAGCAGCCGGGCACATA...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGGATATGTGCCCGGCTaGTGCCTTTGGACAGGAACA +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGGYVPG*CLWTGT
Trigger: TGTTCCTGTCCAAAGGCAGCAGCCGGGCACATATCC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCTGAGCACCCTGCTGTaGTCGGCGGCTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELLSTLL*SAASSA
Trigger: GGCCGAGGAAGCCGCCGAGCACAGCAGGGTGCTCAG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAGCTCCTCCAAGCCATaGTGGATTTGGATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMSSSKP*WIWIPG
Trigger: TCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGGGGTCCCCCAAGCCTaGAGGTCCTTGGGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELGVPQA*RSLGQG
Trigger: GCCTTGGCCCAAGGACCTGCAGGCTTGGGGGACCCC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGGGCATACTGGCAGCTaGGCTTGGGCAGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELGHTGS*AWAGRV
Trigger: CACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGATCCCTCCATAGTCGGTaGCCTCCTCCTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRSLHSR*PPPRPL
Trigger: GAGAGGACGAGGAGGAGGCCACCGACTATGGAGGGA...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCGGAGGGGAGGAGAGATaGGAGACTGTGTGTATGTCC +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSGGEER*ETVCMS
Trigger: GGACATACACACAGTCTCCCATCTCTCCTCCCCTCC...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTCTGGATTTGGATTCCTaGAACCCCCTGTACCCATGC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPLDLDS*NPLYPC
Trigger: GCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAG...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCAAGCCATGCTGGATTTaGATTCCTGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSKPCWI*IPGTPC
Trigger: ACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACATCCAGGCCCTGGGACTaGACAGAATGGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTSRPWD*TEWSVA
Trigger: AGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGA...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTATAAAGGTCACTTTTaGGGGACACCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMYKGHF*GTPSSC
Trigger: GCAGCTGGAGGGTGTCCCCCAAAAGTGACCTTTATA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGGGGGCCTGTGCCCCTaGGAAGGTGCTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAGGLCP*EGAGPN
Trigger: ATTTGGGCCAGCACCTTCCCAGGGGCACAGGCCCCC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGCACCCGCGCAGCTTTaGGAAAGAACACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTAPAQL*ERTLGL
Trigger: GAGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACATGGGGCTGCTCCCCATaGGTGTCTCAACTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTWGCSP*VSQLGR
Trigger: CCTACCTAGTTGAGACACCCATGGGGAGCAGCCCCA...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAACTCCGACATGCTGTTaGGGCTGCTCCCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRTPTCC*GCSPWV
Trigger: CACCCATGGGGAGCAGCCCCAACAGCATGTCGGAGT...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCCCGGCAGTCGGCACTaGGGTCCCTCCATAGTCGGT +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELPGSRH*GPSIVG
Trigger: ACCGACTATGGAGGGACCTCAGTGCCGACTGCCGGG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATACATGTGCCTGCCCTaGGAGGAGCATGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAYMCLP*EEHGPG
Trigger: GCCTGGCCCATGCTCCTCTCAGGGCAGGCACATGTA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGCCACTGGGCCCATCTaGCCAGGCGAGCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELATGPI*PGELSC
Trigger: ACAGCTGAGCTCGCCTGGTCAGATGGGCCCAGTGGC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACATATGTGCCCGGCTGCTaGCTTTGGACAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTYVPGC*LWTGTA
Trigger: TGCTGTTCCTGTCCAAAGGCAGCAGCCGGGCACATA...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCCCCCGTACATGTGCCTaGCCTGAGAGGAGCATGGGC +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLPRTCA*PERSMG
Trigger: GCCCATGCTCCTCTCAGGGCAGGCACATGTACGGGG...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCCCAAAGCCAGGCAGCTaGCAATCCCACGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGPKPGS*QSHGIR
Trigger: TCTTATTCCGTGGGATTGGCAGCTGCCTGGCTTTGG...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCCAAAGCCAGGCAGCTaGCAATCCCACGGAATAAGA +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWPKPGS*QSHGIR
Trigger: TCTTATTCCGTGGGATTGGCAGCTGCCTGGCTTTGG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCTCCAGCTGCCCCACTaGCAAGCTGGTGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELLQLPH*QAGAQP
Trigger: GGGCTGTGCACCAGCTTGGCAGTGGGGCAGCTGGAG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGACAAGGCCTGGCTATaGAGCCCTCACTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRADKAWL*SPHWHR
Trigger: GCGGTGCCAGTGAGGGCTGCATAGCCAGGCCTTGTC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCAGGTGTGAGCCAACGTaGCTGGCCTCTTTTATCTTA +
Preference number: 4 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSRCEPT*LASFIL
Trigger: TAAGATAAAAGAGGCCAGGCACGTTGGCTCACACCT...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCCTCCCAAAGGGTTCTaGCACCCCTGGGGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELPPKGF*HPWGPL
Trigger: TAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACGCCAGAACCAGCCGTaGCTGGCCTTGAAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRARQNQP*LALKVH
Trigger: GTGCACCTTCAAGGCCAGCCACGGCTGGTTCTGGCG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCTGGATTTGGATTCCTaGAACCCCCTGTACCCATGC +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWLDLDS*NPLYPC
Trigger: GCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGCCCTGAGAGGAGCATaGGCCAGGCCTCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAALRGA*ARPLFQ
Trigger: CTGGAAGAGAGGCCTGGCCCATGCTCCTCTCAGGGC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATCCAGTGCATGTGACTaGTGCAGGGGCGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRASSACD*CRGGGP
Trigger: TGGGCCTCCGCCCCTGCACCAGTCACATGCACTGGA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGAGATGATTGTGCTGTaGCTCCGGGGCCACATAGCA +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTEMIVL*LRGHIA
Trigger: TGCTATGTGGCCCCGGAGCCACAGCACAATCATCTC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGGGTTTGACAGGCCCTaGGGCCCTTTCCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRGFDRP*GPFLLS
Trigger: TGAAAGGAGGAAAGGGCCCCAGGGCCTGTCAAACCC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTTATAAAGGTCACTTTTaGGGGACACCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPYKGHF*GTPSSC
Trigger: GCAGCTGGAGGGTGTCCCCCAAAAGTGACCTTTATA...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGACCCCTGGGAAGGTGCTaGCCCAAATGTCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRPLGRC*PKCLRL
Trigger: AAGCCTGAGACATTTGGGCCAGCACCTTCCCAGGGG...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGGGGGCCTGTGCCCCTaGGAAGGTGCTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELGGLCP*EGAGPN
Trigger: ATTTGGGCCAGCACCTTCCCAGGGGCACAGGCCCCC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACCGACACCAGCCTCCTaGGACCCGGGCCAACAAAAG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAPTPAS*DPGQQK
Trigger: CTTTTGTTGGCCCGGGTCCCAGGAGGCTGGTGTCGG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGGTCTCAGGGATCCATaGCTGGCACTGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAGLRDP*LALPTG
Trigger: CCCTGTGGGCAGTGCCAGCCATGGATCCCTGAGACC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp CTCTCACCAACAGAGCTCCTCCAAGCCATGCTGGATTaGGATTCCTGGAACCCCCTGTACCCATGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSPTELLQAMLD*DSWNPLYPCGG
Trigger: CCCACCGCATGGGTACAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCTCTGTTGGTGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAGTTCCCACCCTACCTaGGGAGGCATGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLSSHPT*GGMGIP
Trigger: AGGGATGCCCATGCCTCCTCAGGTAGGGTGGGAACT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGCTGCCGGTCAGGTTTaGGGCCAGCAGCACCGTTAC +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELAAGQV*GQQHRY
Trigger: GTAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGCTTCAGCTTGTGGCTaGCGGTCAGGTTTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAASACG*RSGLRP
Trigger: TGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACCATCATCGTCCAGGTaGAGCCACTCCGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAPSSSR*SHSATS
Trigger: GGAGGTTGCGGAGTGGCTGCACCTGGACGATGATGG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCTCTACACCTCCCTGCTaGACCCAGAACCTAATACAG +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGSTPPC*TQNLIQ
Trigger: CTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGA...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATCCCTCCATAGTCGGTaGCCTCCTCCTCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRASLHSR*PPPRPL
Trigger: GAGAGGACGAGGAGGAGGCCACCGACTATGGAGGGA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGGAGGGGAGGAGAGATaGGAGACTGTGTGTATGTCC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRGGEER*ETVCMS
Trigger: GGACATACACACAGTCTCCCATCTCTCCTCCCCTCC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAGGACAGAATGGTCTGTaGCTGATGAGGAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRGQNGL*LMRKQG
Trigger: CCCCTGCTTCCTCATCAGCCACAGACCATTCTGTCC...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGCAATCTCTGCCTTCTaGCTTCAAGCATTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: APHTSSGSISAKAVPTLPAISAF*LQAFLV
Trigger: CACGAGAAATGCTTGAAGCCAGAAGGCAGAGATTGC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCTACAGCCACCAACCCTaGGGTCTTTCCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSYSHQP*GLSITS
Trigger: TGAAGTGATGGAAAGACCCCAGGGTTGGTGGCTGTA...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGGCCATGCTGATGAGTaGGCGCAACTGCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELGHADE*AQLHQP
Trigger: AGGCTGGTGCAGTTGCGCTCACTCATCAGCATGGCC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAACAGAACCAGGGTTTaGCAGGCCCTGGGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLNRTRV*QALGPF
Trigger: AAAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGAGTTCCCACCCTACCTaGGGAGGCATGGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELSSHPT*GGMGIP
Trigger: AGGGATGCCCATGCCTCCTCAGGTAGGGTGGGAACT...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAATAGAAAGTGGCCATTaGGGGACTGGGGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAIESGH*GTGGQA
Trigger: GGCCTGTCCCCCAGTCCCTCAATGGCCACTTTCTAT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGCACAGAGGGTGGCACTaGGTATTGCCCTGGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELHRGWH*VLPWGL
Trigger: TAGCCCCCAGGGCAATACGCAGTGCCACCCTCTGTG...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAGGTGTGAGCCAACGTaGCTGGCCTCTTTTATCTTA +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGRCEPT*LASFIL
Trigger: TAAGATAAAAGAGGCCAGGCACGTTGGCTCACACCT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCCGCCTGCAGGGAATGTaGAGAATCTGCCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLRLQGM*RICQSG
Trigger: TCCGCTCTGGCAGATTCTGCACATTCCCTGCAGGCG...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGTCACTGGGCTGGCCTaGTCACACACCGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELVTGLA*SHTVIG
Trigger: CCCTATGACGGTGTGTGACCAGGCCAGCCCAGTGAC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACATGGGACTGGACAGAATaGTCTGTGGCTGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTWDWTE*SVADEE
Trigger: TTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCA...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCTCCAGGCCCTGGGACTaGACAGAATGGTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLSRPWD*TEWSVA
Trigger: AGCCACAGACCATTCTGTCCAGTCCCAGGGCCTGGA...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGAGAGCCCACAGAGGGTaGCACTGCGTATTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELRAHRG*HCVLPW
Trigger: CCAGGGCAATACGCAGTGCCACCCTCTGTGGGCTCT...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGCGGCAATGAGTAGTTaGGCTGAAGGGCAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELAAMSS*AEGQRH
Trigger: GTGGCGCTGCCCTTCAGCCCAACTACTCATTGCCGC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCCTTGTTTATAGAAAGTaGCCATTGAGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSLVYRK*PLRDWG
Trigger: CCCCCAGTCCCTCAATGGCCACTTTCTATAAACAAG...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCTTGTTTATAGAAAGTaGCCATTGAGGGACTGGGGG +
Preference number: 4 (lower is better)
Translates to: HTSSGSISAKAVPTLPEELVYRK*PLRDWG
Trigger: CCCCCAGTCCCTCAATGGCCACTTTCTATAAACAAG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCGGTGTGCTTCGCCACTaGGATGATTGTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLGVLRH*DDCAVA
Trigger: AGCCACAGCACAATCATCTCAGTGGCGAAGCACACC...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATCCCCTCCCTCCAAGTaGAGCAGGAGAAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRASPPSK*SRRKVT
Trigger: AGTGACCTTTCTCCTGCTGCACTTGGAGGGAGGGGA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCGCTAATGCCAGGGCCTaGTTCCAGGTAAGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLANARA*FQVSQV
Trigger: CACCTGACTTACCTGGAAGCAGGCCCTGGCATTAGC...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGATATATTTCTTCACTTaGGGGCAGTTCCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMIYFFT*GQFQGT
Trigger: AGTTCCTTGGAACTGCCCGCAAGTGAAGAAATATAT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGGTTAGAGGAAGCAGATaGAGCCTCACCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELVRGSR*SLTPAH
Trigger: GTGGGCTGGGGTGAGGCTGCATCTGCTTCCTCTAAC...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGTAGCGTTTGACGCCTaGGACAAATTCCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGVAFDA*DKFLKE
Trigger: TTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTAC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGTAGCGTTTGACGCCTaGGACAAATTCCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWVAFDA*DKFLKE
Trigger: TTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTAC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGAAAAATAGAATCAAGTaGTGTGCTTCGCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMKNRIK*CASPLR
Trigger: TCTCAGTGGCGAAGCACACCACTTGATTCTATTTTT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGATGGGACTGGACAGAATaGTCTGTGGCTGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRWDWTE*SVADEE
Trigger: TTCCTCATCAGCCACAGACCATTCTGTCCAGTCCCA...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAACTACAGACAAGGCCTaGCTATGCAGCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRATTDKA*LCSPHW
Trigger: CCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGT...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCACTACAGACAAGGCCTaGCTATGCAGCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLTTDKA*LCSPHW
Trigger: CCAGTGAGGGCTGCATAGCCAGGCCTTGTCTGTAGT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAAAGAAAGGTTGGAAATaGAAGCCTCGCCAAAGACGC +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRKKGWK*KPRQRR
Trigger: GCGTCTTTGGCGAGGCTTTCATTTCCAACCTTTCTT...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGACATGCTGTTGGGGCTaGTCCCCATGGGTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELTCCWG*SPWVSQ
Trigger: TTGAGACACCCATGGGGAGCAGCCCCAACAGCATGT...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCTTTCCTACCACAGTGTaGTGTTTCATCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLFPTTV*CFIRSP
Trigger: TGGGCTGCGGATGAAACATCACACTGTGGTAGGAAA...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATTTCCTACCACAGTGTaGTGTTTCATCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAFPTTV*CFIRSP
Trigger: TGGGCTGCGGATGAAACATCACACTGTGGTAGGAAA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCGTGATCTTGGCTCACTaGAATCTCTGCCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLVILAH*NLCLLA
Trigger: AGCCAGAAGGCAGAGATTGCAGTGAGCCAAGATCAC...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCTCCTCCAAGCCATGCTaGATTTGGATTCCTGGAACC +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLSSKPC*IWIPGT
Trigger: GGTTCCAGGAATCCAAATCCAGCATGGCTTGGAGGA...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCATACAGCCACCAACCCTaGGGTCTTTCCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAYSHQP*GLSITS
Trigger: TGAAGTGATGGAAAGACCCCAGGGTTGGTGGCTGTA...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAAAACGCGGGTCGGGTaGTTTCAACAAAACCTGCAC +
Preference number: 4 (lower is better)
Translates to: KETELYTSLLHPEPNTGLKTRVG*FQQNLH
Trigger: GTGCAGGTTTTGTTGAAACCACCCGACCCGCGTTTT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATCCCGGGGGCGCAGCCTaGTCCGGAAGCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYPGGAA*SGSSFQ
Trigger: CTGGAAGCTGCTTCCGGAGCAGGCTGCGCCCCCGGG...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATGCGCCATCCGGTGTCTaGAGCTCCTCCGGGGGACCG +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYAPSGV*SSSGGP
Trigger: CGGTCCCCCGGAGGAGCTGCAGACACCGGATGGCGC...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGAGCTCCTCCAAGCCATaGTGGATTTGGATTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELSSSKP*WIWIPG
Trigger: TCCAGGAATCCAAATCCAGCATGGCTTGGAGGAGCT...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAATATATTTCTTCACTTaGGGGCAGTTCCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTIYFFT*GQFQGT
Trigger: AGTTCCTTGGAACTGCCCGCAAGTGAAGAAATATAT...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGCAATCTCTGCCTTCTaGCTTCAAGCATTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAAISAF*LQAFLV
Trigger: CACGAGAAATGCTTGAAGCCAGAAGGCAGAGATTGC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATAGCAGGCCAGCTCCCTaGCCCTCACACCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYSRPAP*PSHQLG
Trigger: CCCGAGCTGGTGTGAGGGGCAGGGAGCTGGCCTGCT...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATCCAGGGCGGGCATACTaGCAGCTGGGCTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYPGRAY*QLGLGR
Trigger: CCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGG...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGAAAAAATAGAATCAAGTaGTGTGCTTCGCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: EERWETVCMSPPSKCSRRKNRIK*CASPLR
Trigger: TCTCAGTGGCGAAGCACACCACTTGATTCTATTTTT...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGTGCACTCCACAACTCTaGGTTTTCAAGGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLSITSDTEQNPERVSELCTPQL*VFKVPS
Trigger: AGAGGGAACCTTGAAAACCCAGAGTTGTGGAGTGCA...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATCGCATCTTCTTGCGCTaGGTGCCCACCTCACCGCCC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYRIFLR*VPTSPP
Trigger: GGGCGGTGAGGTGGGCACTCAGCGCAAGAAGATGCG...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATTTGTCCTGGTTGTGGTaGCGCAGGCTGGGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYLSWLW*RRLGGS
Trigger: GGACCCGCCCAGCCTGCGCCACCACAACCAGGACAA...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATGTGGCCCCACCTCTCTaGGGTCCTGGTTCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYVAPPL*GPGSPA
Trigger: GGCTGGAGAACCAGGACCCCAGAGAGGTGGGGCCAC...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATCTGCACCAGCCTCAGTaGCCCCACCTCTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYLHQPQ*PHLSGV
Trigger: GACCCCAGAGAGGTGGGGCCACTGAGGCTGGTGCAG...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATACCGTCATAGGGGCCTaGTGGGGTATGCCCGATGCC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYTVIGA*WGMPDA
Trigger: GGCATCGGGCATACCCCAGCAGGCCCCTATGACGGT...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATGCCGGGAACTTGTCCTaGTTGTGGTGGCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYAGNLS*LWWRRL
Trigger: CAGCCTGCGCCACCACAACCAGGACAAGTTCCCGGC...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATTCCAGTGCATGTGACTaGTGCAGGGGCGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYSSACD*CRGGGP
Trigger: TGGGCCTCCGCCCCTGCACCAGTCACATGCACTGGA...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATCTCCTAGGAGGACACTaGGGGCAGATGGGGACGAGG +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYLLGGH*GQMGTR
Trigger: CCTCGTCCCCATCTGCCCCCAGTGTCCTCCTAGGAG...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATTGGCCATTGAGGGACTaGGGGACAGGCCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYWPLRD*GTGHSH
Trigger: GTGGCTGTGGCCTGTCCCCCAGTCCCTCAATGGCCA...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR TCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATCGTGCCTCAGCCTCCTaGGTAGCTAGGGTTACAGGC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYRASAS*VARVTG
Trigger: GCCTGTAACCCTAGCTACTCAGGAGGCTGAGGCACG...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATAGGCATGCCTGGAGCTaGTGCCCTGAGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYRHAWS*CPELCS
Trigger: TGAGCAGAGCTCAGGGCAGCAGCTCCAGGCATGCCT...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp ATATTTCTTCACTTGCGGGCAGTTCCAAGGAACTGTTaGTTCCTGGACCTGTATAAAGGTCACTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IFLHLRAVPRNC*FLDLYKGHFWG
Trigger: CCCCCAAAAGTGACCTTTATACAGGTCCAGGAACAAACAGTTCCTTGGAACTGCCCGCAAGTGAAGAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATTTCCAACAGGCGCTGTaGCTTGTATGCCCCGTACAT +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYFQQAL*LVCPVH
Trigger: ATGTACGGGGCATACAAGGCACAGCGCCTGTTGGAA...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATGTGATCTTGGCTCACTaGAATCTCTGCCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYVILAH*NLCLLA
Trigger: AGCCAGAAGGCAGAGATTGCAGTGAGCCAAGATCAC...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATAAAACGCGGGTCGGGTaGTTTCAACAAAACCTGCAC +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYKTRVG*FQQNLH
Trigger: GTGCAGGTTTTGTTGAAACCACCCGACCCGCGTTTT...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR GCA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATAACTCTACACCTCCCTaGTGCACCCAGAACCTAATA +
Preference number: 4 (lower is better)
Translates to: STASLSSQILRYRYIHIYNSTPP*CTQNLI
Trigger: TATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTT...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
3UTR CAA 72 bp ATAGATATATACATATATATGTATATATTTCTTCACTaGCGGGCAGTTCCAAGGAACTGTTTGTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: IDIYIYMYIFLH*RAVPRNCLFLD
Trigger: GTCCAGGAACAAACAGTTCCTTGGAACTGCCCGCAAGTGAAGAAATATATACATATATATGTATATATCTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp CGGGCCCGTAGATCTGGCGCGCGAAGGCCTCGGCCTGCGCCTGGATaGGCGGGCCAGACAGCGGCACCCCGTGCTGGCGCAGCGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RARRSGARRPRPAPG*AGQTAAPRAGAAPG
Trigger: TCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTCTGGCCCGCTCATCCAGGCGCAGGCCGAGGCCTTCGCGCGCCAGATCTACGGGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp CACCGCCCAGCTGCTCCAGGAACCAGCGCAGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGCGTCCCGCCCGGCACGCCGAAGTCGCGGC +
Preference number: 5 (lower is better)
Translates to: HRPAAPGTSAAWARP*ASRAASRPARRSRG
Trigger: GCCGCGACTTCGGCGTGCCGGGCGGGACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTCCTGGAGCAGCTGGGCGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp CGCAGCGTCCCGCCCGGCACGCCGAAGTCGCGGCACACACTGGCCTaGCGCTCGCCGCCCTTGACGCGCTCGATGGCCTGCAGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RSVPPGTPKSRHTLA*RSPPLTRSMACSLS
Trigger: GGACAAGCTGCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGCAGGCCAGTGTGTGCCGCGACTTCGGCGTGCCGGGCGGGACGCTGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp GCCTCGGCCTGCGCCTGGATGAGCGGGCCAGACAGCGGCACCCCGTaGTGGCGCAGCGCCAGGAACCAGGCGTACACGGCGCGGTCGATC +
Preference number: 5 (lower is better)
Translates to: ASACAWMSGPDSGTP*WRSARNQAYTARSI
Trigger: GATCGACCGCGCCGTGTACGCCTGGTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTCTGGCCCGCTCATCCAGGCGCAGGCCGAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp GCCTGCACCGCACGGGGGCATCCTCGCTGTCCAGGGCGGGCATACTaGCAGCTGGGCTTGGGCAGGGCGGGTGGGCCACCAGCAGCACGG +
Preference number: 5 (lower is better)
Translates to: ACTARGHPRCPGRAY*QLGLGRAGGPPAAR
Trigger: CCGTGCTGCTGGTGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGGACAGCGAGGATGCCCCCGTGCGGTGCAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp CCGCCCGATGACCAGCGGCTTCAGCTTGTGGCTGCCGGTCAGGTTTaGGGCCAGCAGCACCGTTACGCGGTCGCCCCGCCAGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: PPDDQRLQLVAAGQV*GQQHRYAVAPPAPA
Trigger: GGCCGGCGCTGGCGGGGCGACCGCGTAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp TCGGCCTGCGCCTGGATGAGCGGGCCAGACAGCGGCACCCCGTGCTaGCGCAGCGCCAGGAACCAGGCGTACACGGCGCGGTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: SACAWMSGPDSGTPC*RSARNQAYTARSIS
Trigger: GGAGATCGACCGCGCCGTGTACGCCTGGTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTCTGGCCCGCTCATCCAGGCGCAGGCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp CTGTCCAGGGCGGGCATACTGGCAGCTGGGCTTGGGCAGGGCGGGTaGGCCACCAGCAGCACGGCCTTCTGCTGCAGGCAGCTTCGGCGC +
Preference number: 5 (lower is better)
Translates to: LSRAGILAAGLGQGG*ATSSTAFCCRQLRR
Trigger: GCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCTGCTGGTGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGGACAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp GGGGGCATCCTCGCTGTCCAGGGCGGGCATACTGGCAGCTGGGCTTaGGCAGGGCGGGTGGGCCACCAGCAGCACGGCCTTCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GGILAVQGGHTGSWA*AGRVGHQQHGLLLQ
Trigger: CTGCAGCAGAAGGCCGTGCTGCTGGTGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGGACAGCGAGGATGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp CCTGGTTGTGGTGGCGCAGGCTGGGCGGGTCCGGCAGCCGCCCGATaGCCAGCGGCTTCAGCTTGTGGCTGCCGGTCAGGTTTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGCGGAGWAGPAAAR*PAASACGCRSGLRP
Trigger: TGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGGACCCGCCCAGCCTGCGCCACCACAACCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp CTGCCTTTGGACAGGAACAGCACCCGCACAGCGCCATCCGGTGTCTaGAGCTCCTCCGGGGGACCGAGGGGCTCCGGCCTGCACCGCACG +
Preference number: 5 (lower is better)
Translates to: LPLDRNSTRTAPSGV*SSSGGPRGSGLHRT
Trigger: CGTGCGGTGCAGGCCGGAGCCCCTCGGTCCCCCGGAGGAGCTGCAGACACCGGATGGCGCTGTGCGGGTGCTGTTCCTGTCCAAAGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp CTGGGCGGGTCCGGCAGCCGCCCGATGACCAGCGGCTTCAGCTTGTaGCTGCCGGTCAGGTTTGCGGCCAGCAGCACCGTTACGCGGTCG +
Preference number: 5 (lower is better)
Translates to: LGGSGSRPMTSGFSL*LPVRFAASSTVTRS
Trigger: CGACCGCGTAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGGACCCGCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGTACTGGCAGCTGGGCTaGGGCAGGGCGGGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWYWQLG*GRAGGP
Trigger: TGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTA...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp TGCCGTGGCGCTTCTGCCAGCGCCAGAACCAGCCGTGGCTGGCCTTaGAGGTGCACTCGGGCCCGTAGATCTGGCGCGCGAAGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: CRGASASARTSRGWP*RCTRARRSGARRPR
Trigger: CCGAGGCCTTCGCGCGCCAGATCTACGGGCCCGAGTGCACCTTCAAGGCCAGCCACGGCTGGTTCTGGCGCTGGCAGAAGCGCCACGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp CCGGGGGCGCAGCCTGCTCCGGAAGCAGCTTCCAGTAGAGGCCGGTaGCGCTGGCGCTGTAAATCTGCTCGTCCCCGTAGCCGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: PGAQPAPEAASSRGR*RWRCKSARPRSRPR
Trigger: CCGAGGGCGGCTACGGGGACGAGCAGATTTACAGCGCCAGCGTCACCGGCCTCTACTGGAAGCTGCTTCCGGAGCAGGCTGCGCCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp CGGCCACCACGCCCTGCTCCAGCGGTGCGGGGATATGTGCCCGGCTaGTGCCTTTGGACAGGAACAGCACCCGCACAGCGCCATCCGGTG +
Preference number: 5 (lower is better)
Translates to: RPPRPAPAVRGYVPG*CLWTGTAPAQRHPV
Trigger: CACCGGATGGCGCTGTGCGGGTGCTGTTCCTGTCCAAAGGCAGCAGCCGGGCACATATCCCCGCACCGCTGGAGCAGGGCGTGGTGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCAGCCGTGGCTGGCCTaGAAGGTGCACTCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLQPWLA*KVHSGP
Trigger: CGGGCCCGAGTGCACCTTCAAGGCCAGCCACGGCTG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTGCCGCTCGCCGCCCTaGACGCGCTCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMCRSPP*TRSMAC
Trigger: GCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGCA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGTACTGGCAGCTGGGCTaGGGCAGGGCGGGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMYWQLG*GRAGGP
Trigger: TGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTA...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp GCGCCAGGAACCAGGCGTACACGGCGCGGTCGATCTCCTCCTCGTTaGCCAGCCGCATCTTCTTGCGCTGAGTGCCCACCTCACCGCCCA +
Preference number: 5 (lower is better)
Translates to: APGTRRTRRGRSPPR*PAASSCAECPPHRP
Trigger: TGGGCGGTGAGGTGGGCACTCAGCGCAAGAAGATGCGGCTGGCCAACGAGGAGGAGATCGACCGCGCCGTGTACGCCTGGTTCCTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGGCTGCCGGTCAGGTTaGCGGCCAGCAGCACCGTTA +
Preference number: 5 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLGCRSG*RPAAPL
Trigger: TAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCC...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp TGGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGCAAGCCTGCAGGTCCTaGGGCCAAGGCAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: WPPKGFCHPWGPLQPPTLQACRS*GQGSGL
Trigger: GAGGCCACTGCCTTGGCCCAAGGACCTGCAGGCTTG...CAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp ACACGGCGCGGTCGATCTCCTCCTCGTTGGCCAGCCGCATCTTCTTaGGCTGAGTGCCCACCTCACCGCCCAGCTGCTCCAGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: TRRGRSPPRWPAASS*AECPPHRPAAPGTS
Trigger: GCTGGTTCCTGGAGCAGCTGGGCGGTGAGGTGGGCACTCAGCGCAAGAAGATGCGGCTGGCCAACGAGGAGGAGATCGACCGCGCCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGCCCGGCTGCTGCCTTaGGACAGGAACAGCACCCGC +
Preference number: 5 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMARLLP*DRNSTR
Trigger: GCGGGTGCTGTTCCTGTCCAAAGGCAGCAGCCGGGC...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp CTGGGACAAATTCCTCAAAGAACCAGCCCCGCAGCAGCGGGCGGCTaGGCCAGGCGTCGGGGCTGTAGCGGTAGGAGGCCGGGAACTTGT +
Preference number: 5 (lower is better)
Translates to: LGQIPQRTSPAAAGG*ARRRGCSGRRPGTC
Trigger: ACAAGTTCCCGGCCTCCTACCGCTACAGCCCCGACGCCTGGCTCAGCCGCCCGCTGCTGCGGGGCTGGTTCTTTGAGGAATTTGTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp GGTCGATCTCCTCCTCGTTGGCCAGCCGCATCTTCTTGCGCTGAGTaGCCACCTCACCGCCCAGCTGCTCCAGGAACCAGCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GRSPPRWPAASSCAE*PPHRPAAPGTSAAW
Trigger: CCAAGCTGCGCTGGTTCCTGGAGCAGCTGGGCGGTGAGGTGGGCACTCAGCGCAAGAAGATGCGGCTGGCCAACGAGGAGGAGATCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp AGCAGCTCGCGCTTGTACAGCTGTTTGAAGGCGGCCACCACGCCCTaGTCCAGCGGTGCGGGGATATGTGCCCGGCTGCTGCCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SSSRLYSCLKAATTP*SSGAGICARLLPLD
Trigger: GTCCAAAGGCAGCAGCCGGGCACATATCCCCGCACCGCTGGAGCAGGGCGTGGTGGCCGCCTTCAAACAGCTGTACAAGCGCGAGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GGCCTCCCAAAGGGTTCTGCCACCCCTGGGGGCCGCTACAGCCACCAACCCTGGTTGTCAGCCACATCCTaGGCAGTCCCAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: GLPKGSATPGGRYSHQPWLSATS*AVPGEA
Trigger: TGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACAA...CCAGGGTTGGTGGCTGTAGCGGCCCCCAGGGGTGGCAGAACCCTTTGGGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 90 bp GGCCTTCTGCTGCAGGCAGCTTCGGCGCAGGTAGCGTTTGACGCCTaGGACAAATTCCTCAAAGAACCAGCCCCGCAGCAGCGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GLLLQAASAQVAFDA*DKFLKEPAPQQRAA
Trigger: AGCCGCCCGCTGCTGCGGGGCTGGTTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTACCTGCGCCGAAGCTGCCTGCAGCAGAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCAGCTTGGGCTCGTCCTaGAGCCAGCCGCGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGSLGSS*SQPRSV
Trigger: GACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCT...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGCCCGGCTGCTGCCTTaGGACAGGAACAGCACCCGC +
Preference number: 5 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEARLLP*DRNSTR
Trigger: GCGGGTGCTGTTCCTGTCCAAAGGCAGCAGCCGGGC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGCGCTTGTACAGCTGTTaGAAGGCGGCCACCACGCCC +
Preference number: 5 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMRLYSC*KAATTP
Trigger: GGGCGTGGTGGCCGCCTTCAAACAGCTGTACAAGCG...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGGGCACCCGCGCAGCTTaGGGAAAGAACACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMGTRAA*GKNTWP
Trigger: AGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCC...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 90 bp GCAGCACGGCCTTCTGCTGCAGGCAGCTTCGGCGCAGGTAGCGTTTaGCGCCTGGGACAAATTCCTCAAAGAACCAGCCCCGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: AARPSAAGSFGAGSV*RLGQIPQRTSPAAA
Trigger: CGCTGCTGCGGGGCTGGTTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTACCTGCGCCGAAGCTGCCTGCAGCAGAAGGCCGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGGCTGCCGGTCAGGTTaGCGGCCAGCAGCACCGTTA +
Preference number: 5 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEGCRSG*RPAAPL
Trigger: TAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGACCAGCGGCTTCAGCTaGTGGCTGCCGGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMTSGFS*WLPVRF
Trigger: AAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGT...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGAACAGGCGCTGTGCCTaGTATGCCCCGTACATGTGC +
Preference number: 5 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMNRRCA*YAPYMC
Trigger: GCACATGTACGGGGCATACAAGGCACAGCGCCTGTT...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCTGCCGCTCGCCGCCCTaGACGCGCTCGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: KETELYTSLLHPEPNTGLCRSPP*TRSMAC
Trigger: GCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGCA...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCGCTTGTACAGCTGTTaGAAGGCGGCCACCACGCCC +
Preference number: 5 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWRLYSC*KAATTP
Trigger: GGGCGTGGTGGCCGCCTTCAAACAGCTGTACAAGCG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGAAACTCTCCTGCCGTaGGCCAAGTCACCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWETLLP*AKSPGP
Trigger: GGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGGGTGGCACTGCGTATaGCCCTGGGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGGWHCV*PWGLMP
Trigger: TGGCATTAGCCCCCAGGGCAATACGCAGTGCCACCC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGGGGTGGCACTGCGTATaGCCCTGGGGGCTAATGCCA +
Preference number: 5 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWGWHCV*PWGLMP
Trigger: TGGCATTAGCCCCCAGGGCAATACGCAGTGCCACCC...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 90 bp GGGGAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTaGAGCAGGAGAAAGGTCACTGGGCTGGCCTGGTCACACACCGTC +
Preference number: 5 (lower is better)
Translates to: GEERWETVCMSPPSK*SRRKVTGLAWSHTV
Trigger: GACGGTGTGTGACCAGGCCAGCCCAGTGACCTTTCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCGCAGCAGCTCGCGCTaGTACAGCTGTTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERSSSR*YSCLKA
Trigger: CGCCTTCAAACAGCTGTACAAGCGCGAGCTGCTGCG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGAAACTCTCCTGCCGTaGGCCAAGTCACCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTETLLP*AKSPGP
Trigger: GGGCCCTGGTGACTTGGCCAACGGCAGGAGAGTTTC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATGGGCATCCCTGGCCCCAGTCCAACCAGAAGGACTGTAGGTCTAGACCTGGCGAACAGAACCAGGGTTaGACAGGCCCTGGGGCCCTT +
Preference number: 5 (lower is better)
Translates to: HGHPWPQSNQKDCRSRPGEQNQG*TGPGAL
Trigger: AAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTTC...GCCAGGTCTAGACCTACAGTCCTTCTGGTTGGACTGGGGCCAGGGATGCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGAACAGAACCAGGGTTaGACAGGCCCTGGGGCCCTT +
Preference number: 5 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEEQNQG*TGPGAL
Trigger: AAGGGCCCCAGGGCCTGTCAAACCCTGGTTCTGTTC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCAGCTTGGGCTCGTCCTaGAGCCAGCCGCGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: KETELYTSLLHPEPNTGLSLGSS*SQPRSV
Trigger: GACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCT...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAACCAGCGGCTTCAGCTaGTGGCTGCCGGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTTSGFS*WLPVRF
Trigger: AAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGT...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GCAGGAACACAGCCACCTGTTCCAACAGGCGCTGTGCCTTGTATGCCCCGTACAGGCACCCGCGCAGCTTaGGGAAAGAACACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: AGTQPPVPTGAVPCMPRTGTRAA*GKNTWP
Trigger: AGGCCAAGTGTTCTTTCCCAAAGCTGCGCGGGTGCC...TGTACGGGGCATACAAGGCACAGCGCCTGTTGGAACAGGTGGCTGTGTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GAGGAGAGATGGGAGACTGTGTGTATGTCCCCTCCCTCCAAGTGCAGCAGGAGACGCAGCAGCTCGCGCTaGTACAGCTGTTTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: EERWETVCMSPPSKCSRRRSSSR*YSCLKA
Trigger: CGCCTTCAAACAGCTGTACAAGCGCGAGCTGCTGCG...TCTCCTGCTGCACTTGGAGGGAGGGGACATACACACAGTCTCCCATCTCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCAAGCCATGCTGGATTaGGATTCCTGGAACCCCCTG +
Preference number: 5 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWQAMLD*DSWNPL
Trigger: CAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACAGTGTGATGTTTCATCCGCAGCCCAGTGGACATCGAGGGGGTCCCCCAAGCTATAGAAAGTGGCCATaGAGGGACTGGGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: HSVMFHPQPSGHRGGPPSYRKWP*RDWGTG
Trigger: GCCTGTCCCCCAGTCCCTCAATGGCCACTTTCTATA...GCTTGGGGGACCCCCTCGATGTCCACTGGGCTGCGGATGAAACATCACACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGCGCGGTGTTGTGATCTaGGCTCACTGCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: HTSSGSISAKAVPTLPEERGVVI*AHCNLC
Trigger: GCAGAGATTGCAGTGAGCCAAGATCACAACACCGCG...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGCGCGGTGTTGTGATCTaGGCTCACTGCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWRGVVI*AHCNLC
Trigger: GCAGAGATTGCAGTGAGCCAAGATCACAACACCGCG...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CTCTCCTGCCGTTGGCCAAGTCACCAGGGCCCAAAGCCAGGCAGCTGCCAATCCTTTGGGAAAGAACACTaGGCCTCCCAAAGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LSCRWPSHQGPKPGSCQSFGKEH*ASQRVL
Trigger: CAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAA...GGATTGGCAGCTGCCTGGCTTTGGGCCCTGGTGACTTGGCCAACGGCAGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CATCCCCAGCAGTTCAGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGTTTGGGAAAGAACACTaGGCCTCCCAAAGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: HPQQFRPEALPAGGGGLMFGKEH*ASQRVL
Trigger: CAGAACCCTTTGGGAGGCCAAGTGTTCTTTCCCAAA...CATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCTGAACTGCTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACAAGCCTGCAGGTCCTaGGGCCAAGGCAGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAQACRS*GQGSGL
Trigger: GAGGCCACTGCCTTGGCCCAAGGACCTGCAGGCTTG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCAGACTCCGACATGCTGTaGGGGCTGCTCCCCATGGGT +
Preference number: 5 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRADSDML*GLLPMG
Trigger: ACCCATGGGGAGCAGCCCCAACAGCATGTCGGAGTC...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AAGGAAACGGAACTCTACACCTCCCTGCTGCACCCAGAACCTAATACAGGGCTCTTGTCAGCCACATCCTaGGCAGTCCCAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: KETELYTSLLHPEPNTGLLSATS*AVPGEA
Trigger: TGCCTCTCCTGGGACTGCCAAGGATGTGGCTGACAA...GAGCCCTGTATTAGGTTCTGGGTGCAGCAGGGAGGTGTAGAGTTCCGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGCCCAGGAACTCTGACAATGATGCTGACACGGGGGTCACTAACTGGAAGAGCACAAGCCATGCTGGATTaGGATTCCTGGAACCCCCTG +
Preference number: 5 (lower is better)
Translates to: SPGTLTMMLTRGSLTGRAQAMLD*DSWNPL
Trigger: CAGGGGGTTCCAGGAATCCAAATCCAGCATGGCTTG...TGCTCTTCCAGTTAGTGACCCCCGTGTCAGCATCATTGTCAGAGTTCCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGTTCCAAGGAACTGTTaGTTCCTGGACCTGTATAAA +
Preference number: 5 (lower is better)
Translates to: APHTSSGSISAKAVPTLPVPRNC*FLDLYK
Trigger: TTTATACAGGTCCAGGAACAAACAGTTCCTTGGAAC...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GCCCCTCACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTTATATATTTCTTCACTaGCGGGCAGTTCCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: APHTSSGSISAKAVPTLPYIFLH*RAVPRN
Trigger: GTTCCTTGGAACTGCCCGCAAGTGAAGAAATATATA...AGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp AGGCCAGAGGCTCTTCCTGCAGGTGGCGGTGGCCTGATGGGCTCAGCAGGCATGAAAATTAGTGCTGCCTaGTTTATAGAAAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: RPEALPAGGGGLMGSAGMKISAA*FIESGH
Trigger: ATGGCCACTTTCTATAAACAAGGCAGCACTAATTTT...CATGCCTGCTGAGCCCATCAGGCCACCGCCACCTGCAGGAAGAGCCTCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CACACCAGCTCGGGCAGCATCTCTGCAAAGGCAGTTCCCACCCTACCTGAGGAGGTTCCAAGGAACTGTTaGTTCCTGGACCTGTATAAA +
Preference number: 5 (lower is better)
Translates to: HTSSGSISAKAVPTLPEEVPRNC*FLDLYK
Trigger: TTTATACAGGTCCAGGAACAAACAGTTCCTTGGAAC...CTCCTCAGGTAGGGTGGGAACTGCCTTTGCAGAGATGCTGCCCGAGCTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp GGTCTTTCCATCACTTCAGACACTGAGCAGAACCCAGAGAGGGTTAGTGAGCTGTATAGAAAGTGGCCATaGAGGGACTGGGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: GLSITSDTEQNPERVSELYRKWP*RDWGTG
Trigger: GCCTGTCCCCCAGTCCCTCAATGGCCACTTTCTATA...CAGCTCACTAACCCTCTCTGGGTTCTGCTCAGTGTCTGAAGTGATGGAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp CCAGGGCTCGATAGCAGACAGGAGTTTCGGCCCTCGTCCAGTGCATGTGACTGGAAAATTAGTGCTGCCTaGTTTATAGAAAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: PGLDSRQEFRPSSSACDWKISAA*FIESGH
Trigger: ATGGCCACTTTCTATAAACAAGGCAGCACTAATTTT...CCAGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS-3UTR CAA 90 bp TCCACGGCCTCCCTGAGCTCTCAGATTTTGAGATATAGATATATACATATATATTATATATTTCTTCACTaGCGGGCAGTTCCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: STASLSSQILRYRYIHIYYIFLH*RAVPRN
Trigger: GTTCCTTGGAACTGCCCGCAAGTGAAGAAATATATA...ATATATATGTATATATCTATATCTCAAAATCTGAGAGCTCAGGGAGGCCGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp CCGCCCGGCACGCCGAAGTCGCGGCACACACTGGCCTaGCGCTCGCCGCCCTTGACGCGCTCGATGGCCTGC +
Preference number: 6 (lower is better)
Translates to: PPGTPKSRHTLA*RSPPLTRSMAC
Trigger: GCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGCAGGCCAGTGTGTGCCGCGACTTCGGCGTGCCGGGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp GCCTGGATGAGCGGGCCAGACAGCGGCACCCCGTGCTaGCGCAGCGCCAGGAACCAGGCGTACACGGCGCGG +
Preference number: 6 (lower is better)
Translates to: AWMSGPDSGTPC*RSARNQAYTAR
Trigger: CCGCGCCGTGTACGCCTGGTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTCTGGCCCGCTCATCCAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp GCTGCTCCAGGAACCAGCGCAGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGCGTCCCGCCCGGCACGCCGA +
Preference number: 6 (lower is better)
Translates to: AAPGTSAAWARP*ASRAASRPARR
Trigger: TCGGCGTGCCGGGCGGGACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTCCTGGAGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp AGATCTGGCGCGCGAAGGCCTCGGCCTGCGCCTGGATaGGCGGGCCAGACAGCGGCACCCCGTGCTGGCGCA +
Preference number: 6 (lower is better)
Translates to: RSGARRPRPAPG*AGQTAAPRAGA
Trigger: TGCGCCAGCACGGGGTGCCGCTGTCTGGCCCGCTCATCCAGGCGCAGGCCGAGGCCTTCGCGCGCCAGATCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp GGTGGCGCAGGCTGGGCGGGTCCGGCAGCCGCCCGATaGCCAGCGGCTTCAGCTTGTGGCTGCCGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: GGAGWAGPAAAR*PAASACGCRSG
Trigger: ACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGGACCCGCCCAGCCTGCGCCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp TGCGCCTGGATGAGCGGGCCAGACAGCGGCACCCCGTaGTGGCGCAGCGCCAGGAACCAGGCGTACACGGCG +
Preference number: 6 (lower is better)
Translates to: CAWMSGPDSGTP*WRSARNQAYTA
Trigger: CGCCGTGTACGCCTGGTTCCTGGCGCTGCGCCAGCACGGGGTGCCGCTGTCTGGCCCGCTCATCCAGGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp GGGCTGGGGGCCCGGCCTCGCCGTAGAAGCGCTGGCTaGAGATGCCGTGGCGCTTCTGCCAGCGCCAGAACC +
Preference number: 6 (lower is better)
Translates to: GLGARPRRRSAG*RCRGASASART
Trigger: GGTTCTGGCGCTGGCAGAAGCGCCACGGCATCTCCAGCCAGCGCTTCTACGGCGAGGCCGGGCCCCCAGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 90 bp TCACCGCCCAGCTGCTCCAGGAACCAGCGCAGCTTGGGCTCGTCCTaGAGCCAGCCGCGCAGCGTCCCGCCCGGCACGCCGAAGTCGCGG +
Preference number: 6 (lower is better)
Translates to: SPPSCSRNQRSLGSS*SQPRSVPPGTPKSR
Trigger: CCGCGACTTCGGCGTGCCGGGCGGGACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTCCTGGAGCAGCTGGGCGGTGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 90 bp CGGGGGCATCCTCGCTGTCCAGGGCGGGCATACTGGCAGCTGGGCTaGGGCAGGGCGGGTGGGCCACCAGCAGCACGGCCTTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: RGHPRCPGRAYWQLG*GRAGGPPAARPSAA
Trigger: TGCAGCAGAAGGCCGTGCTGCTGGTGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGGACAGCGAGGATGCCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp GGGGCCCGGCCTCGCCGTAGAAGCGCTGGCTGGAGATaGCGTGGCGCTTCTGCCAGCGCCAGAACCAGCCGT +
Preference number: 6 (lower is better)
Translates to: GARPRRRSAGWR*RGASASARTSR
Trigger: ACGGCTGGTTCTGGCGCTGGCAGAAGCGCCACGGCATCTCCAGCCAGCGCTTCTACGGCGAGGCCGGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp GACAGGAACAGCACCCGCACAGCGCCATCCGGTGTCTaGAGCTCCTCCGGGGGACCGAGGGGCTCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: DRNSTRTAPSGV*SSSGGPRGSGL
Trigger: CAGGCCGGAGCCCCTCGGTCCCCCGGAGGAGCTGCAGACACCGGATGGCGCTGTGCGGGTGCTGTTCCTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp CTCGCTGTCCAGGGCGGGCATACTGGCAGCTGGGCTTaGGCAGGGCGGGTGGGCCACCAGCAGCACGGCCTT +
Preference number: 6 (lower is better)
Translates to: LAVQGGHTGSWA*AGRVGHQQHGL
Trigger: AAGGCCGTGCTGCTGGTGGCCCACCCGCCCTGCCCAAGCCCAGCTGCCAGTATGCCCGCCCTGGACAGCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 90 bp AGGCTGGGCGGGTCCGGCAGCCGCCCGATGACCAGCGGCTTCAGCTaGTGGCTGCCGGTCAGGTTTGCGGCCAGCAGCACCGTTACGCGG +
Preference number: 6 (lower is better)
Translates to: RLGGSGSRPMTSGFS*WLPVRFAASSTVTR
Trigger: CCGCGTAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGGACCCGCCCAGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 72 bp ACCTCACCGCCCAGCTGCTCCAGGAACCAGCGCAGCTaGGGCTCGTCCTTGAGCCAGCCGCGCAGCGTCCCG +
Preference number: 6 (lower is better)
Translates to: TSPPSCSRNQRS*GSSLSQPRSVP
Trigger: CGGGACGCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTCCTGGAGCAGCTGGGCGGTGAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 72 bp GGGTCCGGCAGCCGCCCGATGACCAGCGGCTTCAGCTaGTGGCTGCCGGTCAGGTTTGCGGCCAGCAGCACC +
Preference number: 6 (lower is better)
Translates to: GSGSRPMTSGFS*WLPVRFAASST
Trigger: GGTGCTGCTGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp ATTCCTCAAAGAACCAGCCCCGCAGCAGCGGGCGGCTaGGCCAGGCGTCGGGGCTGTAGCGGTAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: IPQRTSPAAAGG*ARRRGCSGRRP
Trigger: CGGCCTCCTACCGCTACAGCCCCGACGCCTGGCTCAGCCGCCCGCTGCTGCGGGGCTGGTTCTTTGAGGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp GACCAGCGGCTTCAGCTTGTGGCTGCCGGTCAGGTTTaGGGCCAGCAGCACCGTTACGCGGTCGCCCCGCCA +
Preference number: 6 (lower is better)
Translates to: DQRLQLVAAGQV*GQQHRYAVAPP
Trigger: TGGCGGGGCGACCGCGTAACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp CGCCCTGCTCCAGCGGTGCGGGGATATGTGCCCGGCTaGTGCCTTTGGACAGGAACAGCACCCGCACAGCGC +
Preference number: 6 (lower is better)
Translates to: RPAPAVRGYVPG*CLWTGTAPAQR
Trigger: GCGCTGTGCGGGTGCTGTTCCTGTCCAAAGGCAGCAGCCGGGCACATATCCCCGCACCGCTGGAGCAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 90 bp ACGCCCTGCTCCAGCGGTGCGGGGATATGTGCCCGGCTGCTGCCTTaGGACAGGAACAGCACCCGCACAGCGCCATCCGGTGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TPCSSGAGICARLLP*DRNSTRTAPSGVCS
Trigger: GCTGCAGACACCGGATGGCGCTGTGCGGGTGCTGTTCCTGTCCAAAGGCAGCAGCCGGGCACATATCCCCGCACCGCTGGAGCAGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp GCTTCTGCCAGCGCCAGAACCAGCCGTGGCTGGCCTTaGAGGTGCACTCGGGCCCGTAGATCTGGCGCGCGA +
Preference number: 6 (lower is better)
Translates to: ASASARTSRGWP*RCTRARRSGAR
Trigger: TCGCGCGCCAGATCTACGGGCCCGAGTGCACCTTCAAGGCCAGCCACGGCTGGTTCTGGCGCTGGCAGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp CCCAGCCTCCGGGCCATGCTGATGAGTGAGCGCAACTaGACCAGCCTCAGTGGCCCCACCTCTCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: PSLRAMLMSERN*TSLSGPTSLGS
Trigger: GGACCCCAGAGAGGTGGGGCCACTGAGGCTGGTGCAGTTGCGCTCACTCATCAGCATGGCCCGGAGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp TCCGGCAGCCGCCCGATGACCAGCGGCTTCAGCTTGTaGCTGCCGGTCAGGTTTGCGGCCAGCAGCACCGTT +
Preference number: 6 (lower is better)
Translates to: SGSRPMTSGFSL*LPVRFAASSTV
Trigger: AACGGTGCTGCTGGCCGCAAACCTGACCGGCAGCCACAAGCTGAAGCCGCTGGTCATCGGGCGGCTGCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp CCTCCTCGTTGGCCAGCCGCATCTTCTTGCGCTGAGTaGCCACCTCACCGCCCAGCTGCTCCAGGAACCAGC +
Preference number: 6 (lower is better)
Translates to: PPRWPAASSCAE*PPHRPAAPGTS
Trigger: GCTGGTTCCTGGAGCAGCTGGGCGGTGAGGTGGGCACTCAGCGCAAGAAGATGCGGCTGGCCAACGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS GCA 72 bp CGCTTGTACAGCTGTTTGAAGGCGGCCACCACGCCCTaGTCCAGCGGTGCGGGGATATGTGCCCGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RLYSCLKAATTP*SSGAGICARLL
Trigger: CAGCAGCCGGGCACATATCCCCGCACCGCTGGAGCAGGGCGTGGTGGCCGCCTTCAAACAGCTGTACAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CAA 72 bp AAGTCGCGGCACACACTGGCCTGCCGCTCGCCGCCCTaGACGCGCTCGATGGCCTGCAGCTTGTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: KSRHTLACRSPP*TRSMACSLSLM
Trigger: CATCAAGGACAAGCTGCAGGCCATCGAGCGCGTCAAGGGCGGCGAGCGGCAGGCCAGTGTGTGCCGCGACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp ACCAGGCGTACACGGCGCGGTCGATCTCCTCCTCGTTaGCCAGCCGCATCTTCTTGCGCTGAGTGCCCACCT +
Preference number: 6 (lower is better)
Translates to: TRRTRRGRSPPR*PAASSCAECPP
Trigger: AGGTGGGCACTCAGCGCAAGAAGATGCGGCTGGCCAACGAGGAGGAGATCGACCGCGCCGTGTACGCCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp CAGCCTGCTCCGGAAGCAGCTTCCAGTAGAGGCCGGTaGCGCTGGCGCTGTAAATCTGCTCGTCCCCGTAGC +
Preference number: 6 (lower is better)
Translates to: QPAPEAASSRGR*RWRCKSARPRS
Trigger: GCTACGGGGACGAGCAGATTTACAGCGCCAGCGTCACCGGCCTCTACTGGAAGCTGCTTCCGGAGCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp GTCCCCTCCCTCCAAGTGCAGCAGGAGAAAGGTCACTaGGCTGGCCTGGTCACACACCGTCATAGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: VPSLQVQQEKGH*AGLVTHRHRGL
Trigger: CAGGCCCCTATGACGGTGTGTGACCAGGCCAGCCCAGTGACCTTTCTCCTGCTGCACTTGGAGGGAGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS CCA 72 bp CTGCAGGCAGCTTCGGCGCAGGTAGCGTTTGACGCCTaGGACAAATTCCTCAAAGAACCAGCCCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: LQAASAQVAFDA*DKFLKEPAPQQ
Trigger: CTGCTGCGGGGCTGGTTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTACCTGCGCCGAAGCTGCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4
CDS TCA 72 bp CCTTCTGCTGCAGGCAGCTTCGGCGCAGGTAGCGTTTaGCGCCTGGGACAAATTCCTCAAAGAACCAGCCCC +
Preference number: 6 (lower is better)
Translates to: PSAAGSFGAGSV*RLGQIPQRTSP
Trigger: GGGGCTGGTTCTTTGAGGAATTTGTCCCAGGCGTCAAACGCTACCTGCGCCGAAGCTGCCTGCAGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321385.5
ENST00000504548.4