RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIGD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000221944

Ensembl transcript IDs: ENST00000408957.7

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCGGGTGCCGGCCCTGCCATTCCCTGGAGATCCACGCCCCTACCTaGCCTCACCAGACTGAGCCAACCAACCACTGTGGGGCATGTGGG +
Preference number: 1 (lower is better)
Translates to: TGCRPCHSLEIHAPT*PHQTEPTNHCGACG
Trigger: CCCACATGCCCCACAGTGGTTGGTTGGCTCAGTCTGGTGAGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp GCTGGCCCCGGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAATaGCTCCTCGGGATGGTCGATCACAACTGGGGAGGAGGTGGCCCT +
Preference number: 1 (lower is better)
Translates to: AGPGSCAGHPVPATE*LLGMVDHNWGGGGP
Trigger: AGGGCCACCTCCTCCCCAGTTGTGATCGACCATCCCGAGGAGCCATTCTGTAGCCGGGACTGGGTGTCCTGCACAGCTGCCGGGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp CCTCGGGATGGTCGATCACAACTGGGGAGGAGGTGGCCCTCTGCCTaGCTCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: PRDGRSQLGRRWPSA*LAVNSSSSSGSGKG
Trigger: GCCCTTGCCGCTGCCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAGGGCCACCTCCTCCCCAGTTGTGATCGACCATCCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp CAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTaGCATTCCCTGGAGATCCACGCCCCTACCTGCCCTCACCAGACT +
Preference number: 1 (lower is better)
Translates to: QLASSSWPTTTGCRP*HSLEIHAPTCPHQT
Trigger: AGTCTGGTGAGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp TCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTaGCGGCCCTGCCATTCCCTGGAGATCCACGCCCCTACCTGCCCT +
Preference number: 1 (lower is better)
Translates to: SVAQLASSSWPTTTG*RPCHSLEIHAPTCP
Trigger: AGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp GGCTCCTCGGGATGGTCGATCACAACTGGGGAGGAGGTGGCCCTCTaGCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTGGCAGCGGCAA +
Preference number: 1 (lower is better)
Translates to: GSSGWSITTGEEVAL*LPRSELLFQQWQRQ
Trigger: TTGCCGCTGCCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAGGGCCACCTCCTCCCCAGTTGTGATCGACCATCCCGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp TGGGGGTGGGCCGTGGCTAGTGTCCTGCTGCAGTCAGCACACACGTaGGATTGGCTAGCTCATCCTGGCACCAGCCACCCCTCCACTCAG +
Preference number: 1 (lower is better)
Translates to: WGWAVASVLLQSAHT*DWLAHPGTSHPSTQ
Trigger: CTGAGTGGAGGGGTGGCTGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACTAGCCACGGCCCACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp CTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCATTCCCTaGAGATCCACGCCCCTACCTGCCCTCACCAGACTGAGCCAACCA +
Preference number: 1 (lower is better)
Translates to: LPHGPLQPGAGPAIP*RSTPLPALTRLSQP
Trigger: TGGTTGGCTCAGTCTGGTGAGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp GGGAATGAGGAGTGGTTCCTGGTGGGCCGAGTGCTGGACCGCGTCTaGTTCCTGGCCATGCTCTCGCTCTTCATCTGTGGCACAGCTGGC +
Preference number: 1 (lower is better)
Translates to: GNEEWFLVGRVLDRV*FLAMLSLFICGTAG
Trigger: GCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCTCATTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp CGTCTGCTTCCTGGCCATGCTCTCGCTCTTCATCTGTGGCACAGCTaGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: RLLPGHALALHLWHS*HLPHGPLQPGAGPA
Trigger: GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp CCCACCCTCAGGGGAATGAGGAGTGGTTCCTGGTGGGCCGAGTGCTaGACCGCGTCTGCTTCCTGGCCATGCTCTCGCTCTTCATCTGTG +
Preference number: 1 (lower is better)
Translates to: PTLRGMRSGSWWAEC*TASASWPCSRSSSV
Trigger: CACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCTCATTCCCCTGAGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 90 bp CTGCCATTCCCTGGAGATCCACGCCCCTACCTGCCCTCACCAGACTaGGCCAACCAACCACTGTGGGGCATGTGGGAGTCACACACGTGG +
Preference number: 1 (lower is better)
Translates to: LPFPGDPRPYLPSPD*ANQPLWGMWESHTW
Trigger: CCACGTGTGTGACTCCCACATGCCCCACAGTGGTTGGTTGGCTCAGTCTGGTGAGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp GGTTCCTGGTGGGCCGAGTGCTGGACCGCGTCTGCTTCCTGGCCATaGTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGG +
Preference number: 1 (lower is better)
Translates to: GSWWAECWTASASWP*SRSSSVAQLASSSW
Trigger: CCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp TGGGCCGTGGCTAGTGTCCTGCTGCAGTCAGCACACACGTGGGATTaGCTAGCTCATCCTGGCACCAGCCACCCCTCCACTCAGTGCACT +
Preference number: 1 (lower is better)
Translates to: WAVASVLLQSAHTWD*LAHPGTSHPSTQCT
Trigger: AGTGCACTGAGTGGAGGGGTGGCTGGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTGCAGCAGGACACTAGCCACGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp GCTGGACCGCGTCTGCTTCCTGGCCATGCTCTCGCTCTTCATCTGTaGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCC +
Preference number: 1 (lower is better)
Translates to: AGPRLLPGHALALHL*HSWHLPHGPLQPGA
Trigger: GGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp AGGAGTGGTTCCTGGTGGGCCGAGTGCTGGACCGCGTCTGCTTCCTaGCCATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCC +
Preference number: 1 (lower is better)
Translates to: RSGSWWAECWTASAS*PCSRSSSVAQLASS
Trigger: GGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 90 bp TCCCTAGCAGCACAAGCCCTTCACGCCAACCTCTGGCTTCTGCTCTaGAGCTCGGCCTGCTGCCCTAGTGAAGCCACCCCCTCTCTAGGT +
Preference number: 1 (lower is better)
Translates to: SLAAQALHANLWLLL*SSACCPSEATPSLG
Trigger: ACCTAGAGAGGGGGTGGCTTCACTAGGGCAGCAGGCCGAGCTTCAGAGCAGAAGCCAGAGGTTGGCGTGAAGGGCTTGTGCTGCTAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp AAGCTGGGGAAACAGTCTGAGCTGGAGTCCGAGAGTGGTTGGGGGTaGGCCGTGGCTAGTGTCCTGCTGCAGTCAGCACACACGTGGGAT +
Preference number: 1 (lower is better)
Translates to: KLGKQSELESESGWG*AVASVLLQSAHTWD
Trigger: ATCCCACGTGTGTGCTGACTGCAGCAGGACACTAGCCACGGCCCACCCCCAACCACTCTCGGACTCCAGCTCAGACTGTTTCCCCAGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp CCATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATaGCCCACTACAACCGGGTGCCGGCCCTGCCATTCCCTGGAGATC +
Preference number: 1 (lower is better)
Translates to: PCSRSSSVAQLASSS*PTTTGCRPCHSLEI
Trigger: GATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp TACAGAATGGCTCCTCGGGATGGTCGATCACAACTGGGGAGGAGGTaGCCCTCTGCCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTGGC +
Preference number: 1 (lower is better)
Translates to: YRMAPRDGRSQLGRR*PSACLAVNSSSSSG
Trigger: GCCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAGGGCCACCTCCTCCCCAGTTGTGATCGACCATCCCGAGGAGCCATTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp GCCACCAGTTGGGACCCGGACATAGGTAAGAAGGGCCCCAGGAAATaGAGACATGGGCCTGCTGGAAGCCCAAGGATGAGAACAGGACCC +
Preference number: 1 (lower is better)
Translates to: ATSWDPDIGKKGPRK*RHGPAGSPRMRTGP
Trigger: GGGTCCTGTTCTCATCCTTGGGCTTCCAGCAGGCCCATGTCTCCATTTCCTGGGGCCCTTCTTACCTATGTCCGGGTCCCAACTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp GGAGAGGCAAGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTaGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCC +
Preference number: 1 (lower is better)
Translates to: GEARSCSEITAGTRV*LVTRGHPWASHLCS
Trigger: GGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp AAAGCTTTACCAAGGCCACGTCACTGCCCCGGTATGCTGCCTCCATaGTCCCTAGCAGCACAAGCCCTTCACGCCAACCTCTGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: KALPRPRHCPGMLPP*SLAAQALHANLWLL
Trigger: CAGAAGCCAGAGGTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCAGTGACGTGGCCTTGGTAAAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 90 bp AAGTGCCCTTCAGGACTGTGTGAGCCAAACAGCCCTGAGAAAAGCTaGGGAAACAGTCTGAGCTGGAGTCCGAGAGTGGTTGGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: KCPSGLCEPNSPEKS*GNSLSWSPRVVGGG
Trigger: CCCACCCCCAACCACTCTCGGACTCCAGCTCAGACTGTTTCCCCAGCTTTTCTCAGGGCTGTTTGGCTCACACAGTCCTGAAGGGCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 90 bp CAGCCACGTTCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTaGCCTTCAGGACTGTGTGAGCCAAACAGCCCTGAGAAAAGCTGG +
Preference number: 1 (lower is better)
Translates to: QPRSPTEVLSVLFGK*PSGLCEPNSPEKSW
Trigger: CCAGCTTTTCTCAGGGCTGTTTGGCTCACACAGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGAACGTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 90 bp AATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTaGAAGAGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATGC +
Preference number: 1 (lower is better)
Translates to: NTFGLGTGSPFTSSP*KRAVTRGVKSSSRC
Trigger: GCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 90 bp GTTAAACAAGGTTTGAAGTCCAGAATTCCTGACTCTGACCCAATCTaGCACTCTAAGATTCTACGGCCTGAAAAACAGGCCCTTCTTCCC +
Preference number: 1 (lower is better)
Translates to: VKQGLKSRIPDSDPI*HSKILRPEKQALLP
Trigger: GGGAAGAAGGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAGGAATTCTGGACTTCAAACCTTGTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCACCGGGTGCCGGCCCTaGCATTCCCTGGAGATCCAC +
Preference number: 2 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPTGCRP*HSLEIH
Trigger: GTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGT...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCCCCACTACAACCGGGTaGCGGCCCTGCCATTCCCTG +
Preference number: 2 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPPTTTG*RPCHSL
Trigger: CAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGG...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCGCTGGAGTCCGAGAGTaGTTGGGGGTGGGCCGTGGC +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAAGVRE*LGVGRG
Trigger: GCCACGGCCCACCCCCAACCACTCTCGGACTCCAGC...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCCCCAGGAACCCAGCCTaGGCAACATGGGGACACCCG +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAPRNPA*ATWGHP
Trigger: CGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGG...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCGCTGGGGAAACAGTCTaGGCTGGAGTCCGAGAGTGG +
Preference number: 2 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPAGETV*AGVREW
Trigger: CCACTCTCGGACTCCAGCTCAGACTGTTTCCCCAGC...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCGAGAGTGGTTGGGGGTaGGCCGTGGCTAGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAESGWG*AVASVL
Trigger: CAGGACACTAGCCACGGCCCACCCCCAACCACTCTC...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCGCCAACCAACCACTGTaGGGCATGTGGGAGTCACAC +
Preference number: 2 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPANQPL*GMWESH
Trigger: GTGTGACTCCCACATGCCCCACAGTGGTTGGTTGGC...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCTGGAGTGGAGTGGCATaGTCATGGCTCACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAWSGVA*SWLTAA
Trigger: GGCTGCAGTGAGCCATGATCATGCCACTCCACTCCA...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCGGAGGAGACTTTGACTaGCCTCCCTTGACCCCACTA +
Preference number: 2 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPGGDFD*PPLTPL
Trigger: TAGTGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCC...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCTCTCTAGGTGTTCCTaGGGCTCTTGCCCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: CPGMLPPWSLAAQALHANLSRCS*GSCPSC
Trigger: GCAGCTGGGGCAAGAGCCTCAGGAACACCTAGAGAG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGGGCAGGAGGGGACCTTaGAAATATGCCCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALGRRGP*KYALPP
Trigger: TGGAGGGAGGGCATATTTCCAAGGTCCCCTCCTGCC...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCGGAAACAGTCTGAGCTaGAGTCCGAGAGTGGTTGGG +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAGNSLS*SPRVVG
Trigger: CCCAACCACTCTCGGACTCCAGCTCAGACTGTTTCC...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCTGGGAGGCGGAGGTTaGAGTGAGCCAAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: CPGMLPPWSLAAQALHANLGGGG*SEPSQD
Trigger: ATCTTGGCTTGGCTCACTGCAACCTCCGCCTCCCAG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCCAGTCAGCACACACGTaGGATTGGCTAGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAQSAHT*DWLAHP
Trigger: AGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTG...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCGACTCTGACCCAATCTaGCACTCTAAGATTCTACGG +
Preference number: 2 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPDSDPI*HSKILR
Trigger: CCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTC...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGGTGCTCTTTGGGAAGTaGCCTTCAGGACTGTGTGAG +
Preference number: 2 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALVLFGK*PSGLCE
Trigger: CTCACACAGTCCTGAAGGGCACTTCCCAAAGAGCAC...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACAATGGCTCCTCGGGATaGTCGATCACAACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: CPGMLPPWSLAAQALHANNGSSG*SITTGE
Trigger: CTCCCCAGTTGTGATCGACCATCCCGAGGAGCCATT...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGTTAACAGAGAGCCACTaGGCTCTTCATTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALLTESH*ALHSRR
Trigger: CCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAA...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCTCATTCCCATCAGTCTaGAGCCCGAAGGACTGTTTT +
Preference number: 2 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPASFPSV*SPKDCF
Trigger: AAAACAGTCCTTCGGGCTTCAGACTGATGGGAATGA...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATAGGAGTGGTTCCTGGTaGGCCGAGTGCTGGACCGCG +
Preference number: 2 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDRSGSW*AECWTA
Trigger: CGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCT...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACGGTGGAGTGAGTACCTaGGCTTGGAACCGTGATAGA +
Preference number: 2 (lower is better)
Translates to: CPGMLPPWSLAAQALHANGGVST*AWNRDR
Trigger: TCTATCACGGTTCCAAGCCCAGGTACTCACTCCACC...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACACTCCTGAGCTCAAGTaGTCCTCCCACTTGAGTCTT +
Preference number: 2 (lower is better)
Translates to: CPGMLPPWSLAAQALHANTPELK*SSHLSL
Trigger: AAGACTCAAGTGGGAGGATCACTTGAGCTCAGGAGT...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCAGACGACAGGATATGCTaGCAGGAGGGGACCTTGGAA +
Preference number: 2 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSDDRIC*QEGTLE
Trigger: TTCCAAGGTCCCCTCCTGCCAGCATATCCTGTCGTC...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 90 bp GATTACAGCCGGCACACGAGTTTGGCTGGTAACCAGGGGACACCCTaGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCATCTGTA +
Preference number: 2 (lower is better)
Translates to: DYSRHTSLAGNQGTP*GKSPMLPEAVPSSV
Trigger: TACAGATGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGTCTCTCAACCTCTCTaGAAGCCTCAGAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEVSQPL*KPQRAE
Trigger: CTCTGCCCTCTGAGGCTTTCAGAGAGGTTGAGAGAC...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACCTGACGACAGGATATaGTGGCAGGAGGGGACCTTG +
Preference number: 2 (lower is better)
Translates to: HALALHLWHSWHLPHGPLPDDRI*WQEGTL
Trigger: CAAGGTCCCCTCCTGCCAGCATATCCTGTCGTCAGG...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATCAGGGGAATGAGGAGTaGTTCCTGGTGGGCCGAGTG +
Preference number: 2 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDQGNEE*FLVGRV
Trigger: CACTCGGCCCACCAGGAACCACTCCTCATTCCCCTG...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAGTCACCTATGCTCCCTaGGGCTGTTCCCTCATCTGT +
Preference number: 2 (lower is better)
Translates to: HALALHLWHSWHLPHGPLVTYAP*GCSLIC
Trigger: ACAGATGAGGGAACAGCCTCAGGGAGCATAGGTGAC...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATCCGTGGCTAGTGTCCTaGTGCAGTCAGCACACACGT +
Preference number: 2 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDPWLVS*CSQHTR
Trigger: ACGTGTGTGCTGACTGCAGCAGGACACTAGCCACGG...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCTCCAGGAGGAGACTTTaGCTGGCCTCCCTTGACCCC +
Preference number: 2 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPSRRRL*LASLDP
Trigger: GGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGA...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAGTCACAAGAGGTGTaGAGAGTAGCAGCCGATGCT +
Preference number: 2 (lower is better)
Translates to: HALALHLWHSWHLPHGPLQSQEV*RVAADA
Trigger: AGCATCGGCTGCTACTCTTCACACCTCTTGTGACTG...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGCTTGGGAGGACAAGGTaGGTGGACTGCTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRLGRTR*VDCLSS
Trigger: TGAGCTCAAGCAGTCCACCCACCTTGTCCTCCCAAG...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGCATGCACAGTGTGTTTaGAGCAAGAGCAGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEHAQCV*SKSRVR
Trigger: TCTGACTCTGCTCTTGCTTCAAACACACTGTGCATG...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGGTGGGTGGACTGCTTaGGCTCAGGAGCCCACGAAC +
Preference number: 2 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLGGWTA*AQEPTN
Trigger: GTTCGTGGGCTCCTGAGCTCAAGCAGTCCACCCACC...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCTCCTCACAGCAGTATaGATAAGCAAGAGTCATTAT +
Preference number: 2 (lower is better)
Translates to: CPGMLPPWSLAAQALHANLLTAV*ISKSHY
Trigger: ATAATGACTCTTGCTTATCCATACTGCTGTGAGGAG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCGGCTGCAGTGAGCTGTaGTCATGTGACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPGCSEL*SCDCTP
Trigger: TGGAGTGCAGTCACATGATCACAGCTCACTGCAGCC...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAGCATTTTTCTGCCACTaGCCACAAGACGATTTCCTG +
Preference number: 2 (lower is better)
Translates to: HALALHLWHSWHLPHGPLAFFCH*PQDDFL
Trigger: CAGGAAATCGTCTTGTGGTCAGTGGCAGAAAAATGC...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTTTGGCTAGCTCATCCTaGCACCAGCCACCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSLASSS*HQPPLH
Trigger: GTGGAGGGGTGGCTGGTGCCAGGATGAGCTAGCCAA...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTAAGGGCCCCAGGAAATaGAGACATGGGCCTGCTGGA +
Preference number: 2 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSKGPRK*RHGPAG
Trigger: TCCAGCAGGCCCATGTCTCCATTTCCTGGGGCCCTT...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATCTCCAAGCACAGGATTaGTGTCTTTGGGATTCAATC +
Preference number: 2 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDLQAQD*CLWDSI
Trigger: GATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAG...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTCAGGAAATGGAGACATaGGCCTGCTGGAAGCCCAAG +
Preference number: 2 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSQEMET*ACWKPK
Trigger: CTTGGGCTTCCAGCAGGCCCATGTCTCCATTTCCTG...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 90 bp GGCAGGAGGGGACCTTGGAAATATGCCCTCCCTCCAAGCACAGGATaGCTGTCTTTGGGATTCAATCACCAGCAAGTTCGTATTATTTAC +
Preference number: 2 (lower is better)
Translates to: GRRGPWKYALPPSTG*LSLGFNHQQVRIIY
Trigger: GTAAATAATACGAACTTGCTGGTGATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAGGGAGGGCATATTTCCAAGGTCCCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGAAGAGTAGCAGCCGATaGTCTCTCCAAAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLKSSSR*SLQSRA
Trigger: TGCCCTGCTTTGGAGAGAGCATCGGCTGCTACTCTT...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGCTTCTTCCCAAAGGATaGTTAAGACAAGGAAGAGCT +
Preference number: 2 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRLLPKG*LRQGRA
Trigger: AGCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAG...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCCAGGATTGCTGTCTTTaGGATTCAATCACCAGCAAG +
Preference number: 2 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPQDCCL*DSITSK
Trigger: CTTGCTGGTGATTGAATCCCAAAGACAGCAATCCTG...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 90 bp GGACCTTGGAAATATGCCCTCCCTCCAAGCACAGGATTGCTGTCTTaGGGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: GPWKYALPPSTGLLS*GFNHQQVRIIYSSV
Trigger: CACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAGGGAGGGCATATTTCCAAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR TCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTTTATTTACTCCAGTGTaGGTCTGTGTCTGTGCATGC +
Preference number: 2 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSLFTPV*VCVCAC
Trigger: GCATGCACAGACACAGACTCACACTGGAGTAAATAA...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR GCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTGTGAGTCTGTGTCTGTaGATGCACAGTGTGTTTGAA +
Preference number: 2 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSVSLCL*MHSVFE
Trigger: TTCAAACACACTGTGCATGCACAGACACAGACTCAC...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 90 bp CAAAGCATTATTCATTCCCATCAGTCTGAAGCCCGAAGGACTGTTTaGTATAATACCTTCGGACTTGGGACTGGCTCCCCTTTTACAAGT +
Preference number: 2 (lower is better)
Translates to: QSIIHSHQSEARRTV*YNTFGLGTGSPFTS
Trigger: ACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGATGGGAATGAATAATGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 90 bp TCTCTCAACCTCTCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTaGTACACAATAAACACTCAAATGTTAACATTAGCTGCCATTACT +
Preference number: 2 (lower is better)
Translates to: SLNLSESLRGQRISS*YTINTQMLTLAAIT
Trigger: AGTAATGGCAGCTAATGTTAACATTTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGAGGTTGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp GGCCCACTACAACCGGGTGCCGGCCCTGCCATTCCCTaGAGATCCACGCCCCTACCTGCCCTCACCAGACTG +
Preference number: 3 (lower is better)
Translates to: GPLQPGAGPAIP*RSTPLPALTRL
Trigger: CAGTCTGGTGAGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CTCTGCCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTaGCAGCGGCAAGGGCTGGTGGCGGCAGCGCTGGAG +
Preference number: 3 (lower is better)
Translates to: LCLPRSELLFQQ*QRQGLVAAALE
Trigger: CTCCAGCGCTGCCGCCACCAGCCCTTGCCGCTGCCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp CGGCCCTGCCATTCCCTGGAGATCCACGCCCCTACCTaGCCTCACCAGACTGAGCCAACCAACCACTGTGGG +
Preference number: 3 (lower is better)
Translates to: RPCHSLEIHAPT*PHQTEPTNHCG
Trigger: CCCACAGTGGTTGGTTGGCTCAGTCTGGTGAGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp TCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTaGCATTCCCTGGAGATCCACGCCCCTACCTGCCCT +
Preference number: 3 (lower is better)
Translates to: SSSWPTTTGCRP*HSLEIHAPTCP
Trigger: AGGGCAGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp CAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTaGCGGCCCTGCCATTCCCTGGAGATCCACGCCCCT +
Preference number: 3 (lower is better)
Translates to: QLASSSWPTTTG*RPCHSLEIHAP
Trigger: AGGGGCGTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp CTCAGGGGAATGAGGAGTGGTTCCTGGTGGGCCGAGTaGTGGACCGCGTCTGCTTCCTGGCCATGCTCTCGC +
Preference number: 3 (lower is better)
Translates to: LRGMRSGSWWAE*WTASASWPCSR
Trigger: GCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCTCATTCCCCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp GGGACCCCAGCTGGGGAGCCAGGCACAGCAGATGAGTaGTGGAGAAGTGCCCAGGTCAGGGAGAGAGGAGCT +
Preference number: 3 (lower is better)
Translates to: GTPAGEPGTADE*WRSAQVRERGA
Trigger: AGCTCCTCTCTCCCTGACCTGGGCACTTCTCCAGCACTCATCTGCTGTGCCTGGCTCCCCAGCTGGGGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCAGCACACACGTGGGATaGGCTAGCTCATCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPSTHVG*ASSSWH
Trigger: GTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCT...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 72 bp GCACAAGCCCTTCACGCCAACCTCTGGCTTCTGCTCTaGAGCTCGGCCTGCTGCCCTAGTGAAGCCACCCCC +
Preference number: 3 (lower is better)
Translates to: AQALHANLWLLL*SSACCPSEATP
Trigger: GGGGGTGGCTTCACTAGGGCAGCAGGCCGAGCTTCAGAGCAGAAGCCAGAGGTTGGCGTGAAGGGCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp GAGTGGTTCCTGGTGGGCCGAGTGCTGGACCGCGTCTaGTTCCTGGCCATGCTCTCGCTCTTCATCTGTGGC +
Preference number: 3 (lower is better)
Translates to: EWFLVGRVLDRV*FLAMLSLFICG
Trigger: GCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp TCCTGGTGGGCCGAGTGCTGGACCGCGTCTGCTTCCTaGCCATGCTCTCGCTCTTCATCTGTGGCACAGCTG +
Preference number: 3 (lower is better)
Translates to: SWWAECWTASAS*PCSRSSSVAQL
Trigger: CAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp AGGGGAATGAGGAGTGGTTCCTGGTGGGCCGAGTGCTaGACCGCGTCTGCTTCCTGGCCATGCTCTCGCTCT +
Preference number: 3 (lower is better)
Translates to: RGMRSGSWWAEC*TASASWPCSRS
Trigger: AGAGCGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCTCATTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp AGAGAAAGGCCCGGAGTTAGGGCTGAGCCAGTTCTGTaGCAGCCTGAAGCAGGCTGCCCCAGCCATCCAGGC +
Preference number: 3 (lower is better)
Translates to: RERPGVRAEPVL*QPEAGCPSHPG
Trigger: GCCTGGATGGCTGGGGCAGCCTGCTTCAGGCTGCCACAGAACTGGCTCAGCCCTAACTCCGGGCCTTTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp GCTCCTCGGGATGGTCGATCACAACTGGGGAGGAGGTaGCCCTCTGCCTGCCTCGCAGTGAACTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: APRDGRSQLGRR*PSACLAVNSSS
Trigger: GGAAGAGGAGTTCACTGCGAGGCAGGCAGAGGGCCACCTCCTCCCCAGTTGTGATCGACCATCCCGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACTGGCAGGAGGGGACCTaGGAAATATGCCCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: CPGMLPPWSLAAQALHANWQEGT*EICPPS
Trigger: GGAGGGAGGGCATATTTCCAAGGTCCCCTCCTGCCA...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp GGATGGTCGATCACAACTGGGGAGGAGGTGGCCCTCTaGCTGCCTCGCAGTGAACTCCTCTTCCAGCAGTGG +
Preference number: 3 (lower is better)
Translates to: GWSITTGEEVAL*LPRSELLFQQW
Trigger: CCACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAGAGGGCCACCTCCTCCCCAGTTGTGATCGACCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CTGGGGAAACAGTCTGAGCTGGAGTCCGAGAGTGGTTaGGGGTGGGCCGTGGCTAGTGTCCTGCTGCAGTCA +
Preference number: 3 (lower is better)
Translates to: LGKQSELESESG*GWAVASVLLQS
Trigger: TGACTGCAGCAGGACACTAGCCACGGCCCACCCCCAACCACTCTCGGACTCCAGCTCAGACTGTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATaGCCCACTACAACCGGGTGCCGGCCCTGCCATTCC +
Preference number: 3 (lower is better)
Translates to: RSSSVAQLASSS*PTTTGCRPCHS
Trigger: GGAATGGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp GGCAGCTGTGCAGGACACCCAGTCCCGGCTACAGAATaGCTCCTCGGGATGGTCGATCACAACTGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: GSCAGHPVPATE*LLGMVDHNWGG
Trigger: TCCTCCCCAGTTGTGATCGACCATCCCGAGGAGCCATTCTGTAGCCGGGACTGGGTGTCCTGCACAGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp AAACAGTCTGAGCTGGAGTCCGAGAGTGGTTGGGGGTaGGCCGTGGCTAGTGTCCTGCTGCAGTCAGCACAC +
Preference number: 3 (lower is better)
Translates to: KQSELESESGWG*AVASVLLQSAH
Trigger: GTGTGCTGACTGCAGCAGGACACTAGCCACGGCCCACCCCCAACCACTCTCGGACTCCAGCTCAGACTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CCTGGCCATGCTCTCGCTCTTCATCTGTGGCACAGCTaGCATCTTCCTCATGGCCCACTACAACCGGGTGCC +
Preference number: 3 (lower is better)
Translates to: PGHALALHLWHS*HLPHGPLQPGA
Trigger: GGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CCTCAGGGCCAGGGGGCCATGGAATTAGCCACCAGTTaGGACCCGGACATAGGTAAGAAGGGCCCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: PQGQGAMELATS*DPDIGKKGPRK
Trigger: TTTCCTGGGGCCCTTCTTACCTATGTCCGGGTCCCAACTGGTGGCTAATTCCATGGCCCCCTGGCCCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGCATACCTCAAAGACATaGCAGGTTCAGTTCCAGACC +
Preference number: 3 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRHTSKT*QVQFQT
Trigger: GGTCTGGAACTGAACCTGCAATGTCTTTGAGGTATG...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCCCTCCAAGCACAGGATaGCTGTCTTTGGGATTCAAT +
Preference number: 3 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPPPSTG*LSLGFN
Trigger: ATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAGG...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 72 bp CTGGGGTCTTCCTGGGGGAGAGGCAAGGTCCTGCTCTaGGATTACAGCCGGCACACGAGTTTGGCTGGTAAC +
Preference number: 3 (lower is better)
Translates to: LGSSWGRGKVLL*DYSRHTSLAGN
Trigger: GTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCCCCCAGGAAGACCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp AGGGCAGTCACAAGAGGTGTGAAGAGTAGCAGCCGATaGTCTCTCCAAAGCAGGGCAGCAGCCCATACCAGC +
Preference number: 3 (lower is better)
Translates to: RAVTRGVKSSSR*SLQSRAAAHTS
Trigger: GCTGGTATGGGCTGCTGCCCTGCTTTGGAGAGAGCATCGGCTGCTACTCTTCACACCTCTTGTGACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp AGGTCCTGCTCTGAGATTACAGCCGGCACACGAGTTTaGCTGGTAACCAGGGGACACCCTTGGGCAAGTCAC +
Preference number: 3 (lower is better)
Translates to: RSCSEITAGTRV*LVTRGHPWASH
Trigger: GTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCTGTAATCTCAGAGCAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp TGGGACCCGGACATAGGTAAGAAGGGCCCCAGGAAATaGAGACATGGGCCTGCTGGAAGCCCAAGGATGAGA +
Preference number: 3 (lower is better)
Translates to: WDPDIGKKGPRK*RHGPAGSPRMR
Trigger: TCTCATCCTTGGGCTTCCAGCAGGCCCATGTCTCCATTTCCTGGGGCCCTTCTTACCTATGTCCGGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCCAGAGGATTAGCTCCTaGTACACAATAAACACTCAA +
Preference number: 3 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPQRISS*YTINTQ
Trigger: TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTG...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGAGCCGGCACACGAGTTaGGCTGGTAACCAGGGGACA +
Preference number: 3 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRSRHTS*AGNQGT
Trigger: TGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCT...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CGTCTGCTTCCTGGCCATGCTCTCGCTCTTCATCTGTaGCACAGCTGGCATCTTCCTCATGGCCCACTACAA +
Preference number: 3 (lower is better)
Translates to: RLLPGHALALHL*HSWHLPHGPLQ
Trigger: TTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp TCTCCTACTGAGGTCCTAAGTGTGCTCTTTGGGAAGTaGCCTTCAGGACTGTGTGAGCCAAACAGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: SPTEVLSVLFGK*PSGLCEPNSPE
Trigger: CTCAGGGCTGTTTGGCTCACACAGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGGACCTCAGTAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp AACCAACCACTGTGGGGCATGTGGGAGTCACACACGTaGGTCACACTGAGTCTTATCAGCCACGTTCTCCTA +
Preference number: 3 (lower is better)
Translates to: NQPLWGMWESHT*VTLSLISHVLL
Trigger: TAGGAGAACGTGGCTGATAAGACTCAGTGTGACCCACGTGTGTGACTCCCACATGCCCCACAGTGGTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 72 bp GGACTTGGGACTGGCTCCCCTTTTACAAGTTCTCCCTaGAAGAGGGCAGTCACAAGAGGTGTGAAGAGTAGC +
Preference number: 3 (lower is better)
Translates to: GLGTGSPFTSSP*KRAVTRGVKSS
Trigger: GCTACTCTTCACACCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CCA 72 bp CTACGGCCTGAAAAACAGGCCCTTCTTCCCAAAGGATaGTTAAGACAAGGAAGAGCTAGGCAAGAGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LRPEKQALLPKG*LRQGRARQEEV
Trigger: CACCTCCTCTTGCCTAGCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAGGGCCTGTTTTTCAGGCCGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR-3UTR CAA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCGCATGCACAGTGTGTTaGAAGCAAGAGCAGAGTCAG +
Preference number: 3 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPACTVC*KQEQSQ
Trigger: CTGACTCTGCTCTTGCTTCAAACACACTGTGCATGC...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR GCA 72 bp TCTGTGTTTATAACAAGTGCCCTGGTGATTCTGATGTaGACTGAAGTTTGGGGACCCAGGCTCGTGTCCAGT +
Preference number: 3 (lower is better)
Translates to: SVFITSALVILM*TEVWGPRLVSS
Trigger: ACTGGACACGAGCCTGGGTCCCCAAACTTCAGTGCACATCAGAATCACCAGGGCACTTGTTATAAACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR TCA 72 bp GGTTTGAAGTCCAGAATTCCTGACTCTGACCCAATCTaGCACTCTAAGATTCTACGGCCTGAAAAACAGGCC +
Preference number: 3 (lower is better)
Translates to: GLKSRIPDSDPI*HSKILRPEKQA
Trigger: GGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAGGAATTCTGGACTTCAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGTGGCCCCGGCAGCTGTaGAGGACACCCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRWPRQL*RTPSPG
Trigger: GCCGGGACTGGGTGTCCTGCACAGCTGCCGGGGCCA...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGTGCACGTTCGCCCGCTaGCCCCGGCAGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRCTFAR*PRQLCR
Trigger: CCTGCACAGCTGCCGGGGCCAGCGGGCGAACGTGCA...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGGACAGAGGCAGAACTaGGGCCAGCAGCCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRGQRQN*GQQPAP
Trigger: CGGAGCTGGCTGCTGGCCTCAGTTCTGCCTCTGTCC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCACCGGGTGCCGGCCCTaGCATTCCCTGGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPATGCRP*HSLEIH
Trigger: GTGGATCTCCAGGGAATGGCAGGGCCGGCACCCGGT...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCCCAAGGCCACGTCACTaGCCCGGTATGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPPRPRH*PGMLPP
Trigger: TGGAGGCAGCATACCGGGGCAGTGACGTGGCCTTGG...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCCTCTGGCTTCTGCTCTaGAGCTCGGCCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPALWLLL*SSACCP
Trigger: AGGGCAGCAGGCCGAGCTTCAGAGCAGAAGCCAGAG...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGATCCACGCCCCTACCTaGCCTCACCAGACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRIHAPT*PHQTEP
Trigger: TGGCTCAGTCTGGTGAGGGCAGGTAGGGGCGTGGAT...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGAGCCTGCAACCTCATTaGCTGTGCCCGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRSLQPH*LCPAPA
Trigger: TGCTGGTGCCGGGCACAGGCAATGAGGTTGCAGGCT...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGAGGTGGCCCTCTGCCTaGCTCGCAGTGAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRRWPSA*LAVNSS
Trigger: AGAGGAGTTCACTGCGAGGCAGGCAGAGGGCCACCT...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGACTGGTCAGGGTGGTaGCTGCTGAAGGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRDWSGW*LLKVGV
Trigger: CACCCCAACCTTCAGCAGCCACCACCCTGACCAGTC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGTTGGCTAGCTCATCCTaGCACCAGCCACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRLASSS*HQPPLH
Trigger: GTGGAGGGGTGGCTGGTGCCAGGATGAGCTAGCCAA...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGAGGAGTGGTTCCTGGTaGGCCGAGTGCTGGACCGCG +
Preference number: 4 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALRSGSW*AECWTA
Trigger: CGCGGTCCAGCACTCGGCCCACCAGGAACCACTCCT...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCCTCCTCTTCCAGCAGTaGCAGCGGCAAGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPALLFQQ*QRQGLV
Trigger: CACCAGCCCTTGCCGCTGCCACTGCTGGAAGAGGAG...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCAGGCGGAGGTTGCAGTaGGCCAAGCCAAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPARRRLQ*AKPRSH
Trigger: GTGCGATCTTGGCTTGGCTCACTGCAACCTCCGCCT...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCCTGGCATCTTCCTCATaGCCCACTACAACCGGGTGC +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPLASSS*PTTTGC
Trigger: GCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAG...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGACCTGGTGCCGCCGCTaGTTATCCCACACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALTWCRR*LSHTCL
Trigger: GAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGT...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCGGTATGCTGCCTCCATaGTCCCTAGCAGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPGMLPP*SLAAQA
Trigger: GGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACC...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGTATGCCATAGTACAGTaGCGCCGCGACCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRYAIVQ*RRDRQR
Trigger: CCTTTGTCGGTCGCGGCGCCACTGTACTATGGCATA...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGTGGCTGCTGAAGGTTaGGGTGGCTGTGGCAATTTC +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRVAAEG*GGCGNF
Trigger: GAAATTGCCACAGCCACCCCAACCTTCAGCAGCCAC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGAGTCAGCCTGTCCTTTaGAGCTTTGAAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRSQPVL*SFEARH
Trigger: GTGCCTGGCTTCAAAGCTTCAAAGGACAGGCTGACT...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGATTCTGATGTGCACTaGAGTTTGGGGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRDSDVH*SLGTQA
Trigger: AGCCTGGGTCCCCAAACTTCAGTGCACATCAGAATC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGTGAGTACCTGGGCTTaGAACCGTGATAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRVSTWA*NRDRDR
Trigger: CCTGTCTCTATCACGGTTCCAAGCCCAGGTACTCAC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGTCGAAATTACCCCTTaGTCCATGGGCTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRVEITP*SMGCRM
Trigger: CATTCTGCAGCCCATGGATCAAGGGGTAATTTCGAC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCTTAACAGAGAGCCACTaGGCTCTTCATTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPLTESH*ALHSRR
Trigger: CCTCCTGGAATGAAGAGCTCAGTGGCTCTCTGTTAA...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCACCACCCTCAGGGGAATaGGGAGTGGTTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSPPSGE*GVVPGG
Trigger: CCCACCAGGAACCACTCCTCATTCCCCTGAGGGTGG...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCCTGACGACAGGATATaGTGGCAGGAGGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANPDDRI*WQEGTL
Trigger: CAAGGTCCCCTCCTGCCAGCATATCCTGTCGTCAGG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCAACCTCATTGCCTGTaGCCGGCACCAGCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANQPHCL*PAPAES
Trigger: TGACTCTGCTGGTGCCGGGCACAGGCAATGAGGTTG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCCAACCTCTGGCTTCTaGTCTGAAGCTCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANPTSGF*SEARPA
Trigger: AGCAGGCCGAGCTTCAGAGCAGAAGCCAGAGGTTGG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCTCTCAACAGCCCCAGTaGCCTTTCCATTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPSQQPQ*PFHSCA
Trigger: TGCACATGAATGGAAAGGCCACTGGGGCTGTTGAGA...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACGCCAACCAACCACTGTaGGGCATGTGGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANANQPL*GMWESH
Trigger: GTGTGACTCCCACATGCCCCACAGTGGTTGGTTGGC...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTTCTTGCCCCAGCTGCTaGGGATGCACGTTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGSCPSC*GCTFAR
Trigger: GCGGGCGAACGTGCATCCTCAGCAGCTGGGGCAAGA...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACCCACTACAACCGGGTaGCGGCCCTGCCATTCCCTG +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLPTTTG*RPCHSL
Trigger: CAGGGAATGGCAGGGCCGGCACCCGGTTGTAGTGGG...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTCCCAGGAACCCAGCCTaGGCAACATGGGGACACCCG +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGPRNPA*ATWGHP
Trigger: CGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGG...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGGCCCTGCCATTCCCTaGAGATCCACGCCCCTACCT +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEGPAIP*RSTPLP
Trigger: AGGTAGGGGCGTGGATCTCCAGGGAATGGCAGGGCC...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCATCTGTGGCACAGCTaGCATCTTCCTCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANHLWHS*HLPHGP
Trigger: TGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCGAATTAGCCACCAGTTaGGACCCGGACATAGGTAAG +
Preference number: 4 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAELATS*DPDIGK
Trigger: CTTACCTATGTCCGGGTCCCAACTGGTGGCTAATTC...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACCTGCAGCCTTCAGCTTaGGCCCTTGTTGCACATGCA +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANLQPSA*ALVAHA
Trigger: TGCATGTGCAACAAGGGCCCAAGCTGAAGGCTGCAG...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACTTTGACAATGTAAGCTaGGTCAGGGTGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANFDNVS*VRVGWR
Trigger: CCTCCACCCCACCCTGACTCAGCTTACATTGTCAAA...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTAGTTCTGTGGCAGCCTaGAGCAGGCTGCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGSSVAA*SRLPQP
Trigger: TGGCTGGGGCAGCCTGCTTCAGGCTGCCACAGAACT...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCGTGAGTCTGTGTCTGTaGATGCACAGTGTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPVSLCL*MHSVFE
Trigger: TTCAAACACACTGTGCATGCACAGACACAGACTCAC...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGACTGGTCAGGGTaGTGGCTGCTGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEADWSG*WLLKVG
Trigger: CCCAACCTTCAGCAGCCACCACCCTGACCAGTCAGC...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGAGAGTGGTTGGGGGTaGGCCGTGGCTAGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGESGWG*AVASVL
Trigger: CAGGACACTAGCCACGGCCCACCCCCAACCACTCTC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCAACCGCGTCTGCTTCCTaGCCATGCTCTCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSTASAS*PCSRSS
Trigger: TGAAGAGCGAGAGCATGGCCAGGAAGCAGACGCGGT...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGCAGGGGAATGAGGAGTaGTTCCTGGTGGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEQGNEE*FLVGRV
Trigger: CACTCGGCCCACCAGGAACCACTCCTCATTCCCCTG...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCAGGAATCTTCTTTTCTaGGCAGTAGGTCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPRNLLF*AVGLNS
Trigger: ACTGTTGAGACCTACTGCTCAGAAAAGAAGATTCCT...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCTTATTTACTCCAGTGTaGGTCTGTGTCTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPALFTPV*VCVCAC
Trigger: GCATGCACAGACACAGACTCACACTGGAGTAAATAA...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAGGCAAGGTCCTGCTCTaGGATTACAGCCGGCACACG +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLGKVLL*DYSRHT
Trigger: CGTGTGCCGGCTGTAATCTCAGAGCAGGACCTTGCC...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTTCCAGGAGGAGACTTTaGCTGGCCTCCCTTGACCCC +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGSRRRL*LASLDP
Trigger: GGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCCTGGA...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTCTGCCCTCACCAGACTaGGCCAACCAACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGLPSPD*ANQPLW
Trigger: CCACAGTGGTTGGTTGGCTCAGTCTGGTGAGGGCAG...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGCCAGGCACAGCAGATaGGTGCTGGAGAAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGARHSR*VLEKCP
Trigger: TGGGCACTTCTCCAGCACTCATCTGCTGTGCCTGGC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCACCAAGTGAGCACATaGTGTTGGAAAAATGGCGCT +
Preference number: 4 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALHQVST*CWKNGA
Trigger: AGCGCCATTTTTCCAACAGCATGTGCTCACTTGGTG...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGGAGAGGCAAGGTCCTaGTCTGAGATTACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEGEARS*SEITAG
Trigger: GCCGGCTGTAATCTCAGAGCAGGACCTTGCCTCTCC...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCCCAGGGAAGACCTGGTaGCGCCGCTGGTTATCCCAC +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLPGKTW*RRWLSH
Trigger: GTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGG...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACTCGTACTCTTTTTGCTaGTGGAGGGTCTTGCCTCGA +
Preference number: 4 (lower is better)
Translates to: CPGMLPPWSLAAQALHANSYSFC*WRVLPR
Trigger: TCGAGGCAAGACCCTCCACCAGCAAAAAGAGTACGA...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATGTTGGGGGTGGGCCGTaGCTAGTGTCCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDVGGGP*LVSCCS
Trigger: ACTGCAGCAGGACACTAGCCACGGCCCACCCCCAAC...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCTCAGGAGCCCACGAACCCAGGAACCCAGCCTGGGCAACATGGGGACACCCGGGTTTTTGATTTAAAGTaGGAGATGTGCGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AQEPTNPGTQPGQHGDTRVFDLK*EMCDSS
Trigger: GGAAGAGTCGCACATCTCTCACTTTAAATCAAAAAC...CCGGGTGTCCCCATGTTGCCCAGGCTGGGTTCCTGGGTTCGTGGGCTCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCCAGGGTGGTGGCTGCTaGAGGTTGGGGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPQGGGC*RLGWLW
Trigger: CCACAGCCACCCCAACCTTCAGCAGCCACCACCCTG...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATGCTGGGGAAACAGTCTaGGCTGGAGTCCGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDAGETV*AGVREW
Trigger: CCACTCTCGGACTCCAGCTCAGACTGTTTCCCCAGC...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGCTGGAGAAGCTAGGTaGGACACACCAGGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGAGEAR*DTPGVP
Trigger: AGGCACACCTGGTGTGTCTCACCTAGCTTCTCCAGC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCCTGCCTGCCTCGCAGTaGACTCCTCTTCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLLPASQ*TPLPAV
Trigger: CACTGCTGGAAGAGGAGTTCACTGCGAGGCAGGCAG...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGGTCTGTGTCTGTGCATaGACAGTGTGTTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALVCVCA*TVCLKQ
Trigger: TTGCTTCAAACACACTGTGCATGCACAGACACAGAC...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGTTGATGGTTGCTGACTaGTCAGGGTGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPELMVAD*SGWWLL
Trigger: CAGCAGCCACCACCCTGACCAGTCAGCAACCATCAA...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGGCAGGAGGGGACCTTaGAAATATGCCCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGGRRGP*KYALPP
Trigger: TGGAGGGAGGGCATATTTCCAAGGTCCCCTCCTGCC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGCCGGCACACGAGTTTaGCTGGTAACCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRAGTRV*LVTRGH
Trigger: GTGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAGCACACACGTGGGATTaGCTAGCTCATCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLAHTWD*LAHPGT
Trigger: GGTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGC...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATCCACTGTGGGGCATGTaGGAGTCACACACGTGGGTC +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDPLWGM*ESHTWV
Trigger: GACCCACGTGTGTGACTCCCACATGCCCCACAGTGG...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCTGGTGGGCCGAGTGCTaGACCGCGTCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPWWAEC*TASASW
Trigger: CCAGGAAGCAGACGCGGTCCAGCACTCGGCCCACCA...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGCTGAGCCAGTTCTGTaGCAGCCTGAAGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRAEPVL*QPEAGC
Trigger: GCAGCCTGCTTCAGGCTGCCACAGAACTGGCTCAGC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGGCAGCGGCAAGGGCTaGTGGCGGCAGCGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLGSGKG*WRQRWR
Trigger: TCTCCAGCGCTGCCGCCACCAGCCCTTGCCGCTGCC...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGAATGGCTCCTCGGGATaGTCGATCACAACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPENGSSG*SITTGE
Trigger: CTCCCCAGTTGTGATCGACCATCCCGAGGAGCCATT...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGTCCCGGCTACAGAATaGCTCCTCGGGATGGTCGAT +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGVPATE*LLGMVD
Trigger: ATCGACCATCCCGAGGAGCCATTCTGTAGCCGGGAC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCAACTCCTGAGCTCAAGTaGTCCTCCCACTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSTPELK*SSHLSL
Trigger: AAGACTCAAGTGGGAGGATCACTTGAGCTCAGGAGT...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCTGGAGTGGAGTGGCATaGTCATGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLWSGVA*SWLTAA
Trigger: GGCTGCAGTGAGCCATGATCATGCCACTCCACTCCA...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGCAGTCACAAGAGGTGTaGAGAGTAGCAGCCGATGCT +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEQSQEV*RVAADA
Trigger: AGCATCGGCTGCTACTCTTCACACCTCTTGTGACTG...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCTGCTGCTTCACCTTGTaGTTTTATGTTATGGAAATG +
Preference number: 4 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPCCFTL*FYVMEM
Trigger: CATTTCCATAACATAAAAGCACAAGGTGAAGCAGCA...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATTGGCTAGTGTCCTGCTaGAGTCAGCACACACGTGGG +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDWLVSC*SQHTRG
Trigger: CCCACGTGTGTGCTGACTGCAGCAGGACACTAGCCA...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGCCGTGGCTAGTGTCCTaGTGCAGTCAGCACACACGT +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRPWLVS*CSQHTR
Trigger: ACGTGTGTGCTGACTGCAGCAGGACACTAGCCACGG...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCTGGTTATCCCACACCTaGCTCCCACCCTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLWLSHT*LPPSGE
Trigger: TTCCCCTGAGGGTGGGAGGCAGGTGTGGGATAACCA...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCGCCTGTGTGGAAGCCTaGAACCTCATTGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLACVEA*NLIACA
Trigger: GGCACAGGCAATGAGGTTGCAGGCTTCCACACAGGC...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCGAGACACACCAGGTGTaGCTGGGGACAGTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPETHQV*LGTVLP
Trigger: GGGGAGGACTGTCCCCAGGCACACCTGGTGTGTCTC...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTAGCTTGGGCCCTTGTTaGACATGCAGATTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGSLGPC*TCRFPG
Trigger: GCCTGGGAATCTGCATGTGCAACAAGGGCCCAAGCT...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGAAGAGGGAGAGAGATaGGGAACGGTCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKREEGER*GTVCGW
Trigger: CCACCCACAGACCGTTCCCCATCTCTCTCCCTCTTC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGGAGGAGACTTTGACTaGCCTCCCTTGACCCCACTA +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGGGDFD*PPLTPL
Trigger: TAGTGGGGTCAAGGGAGGCCAGTCAAAGTCTCCTCC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCAAGGGCCCCAGGAAATaGAGACATGGGCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLKGPRK*RHGPAG
Trigger: TCCAGCAGGCCCATGTCTCCATTTCCTGGGGCCCTT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGAGCGGCAAGGGCTGGTaGCGGCAGCGCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLSGKGW*RQRWRS
Trigger: GCTTCTCCAGCGCTGCCGCCACCAGCCCTTGCCGCT...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGATGGTCGATCACAACTaGGGAGGAGGTGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRMVDHN*GGGGPL
Trigger: CAGAGGGCCACCTCCTCCCCAGTTGTGATCGACCAT...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGTGGCATCTAAAATGGTaGATCCTTTCCAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: CGTAGIFLMAHYNRVPALWHLKW*ILSRRF
Trigger: AAACCTTCTGGAAAGGATTCACCATTTTAGATGCCA...CAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATGTCTCTCAACCTCTCTaGAAGCCTCAGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDVSQPL*KPQRAE
Trigger: CTCTGCCCTCTGAGGCTTTCAGAGAGGTTGAGAGAC...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGGCTGCAGTGAGCTGTaGTCATGTGACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRGCSEL*SCDCTP
Trigger: TGGAGTGCAGTCACATGATCACAGCTCACTGCAGCC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCGTCACCTATGCTCCCTaGGGCTGTTCCCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLVTYAP*GCSLIC
Trigger: ACAGATGAGGGAACAGCCTCAGGGAGCATAGGTGAC...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAAAGAGTAGCAGCCGATaGTCTCTCCAAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLKSSSR*SLQSRA
Trigger: TGCCCTGCTTTGGAGAGAGCATCGGCTGCTACTCTT...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAGTGCTCTTTGGGAAGTaGCCTTCAGGACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLVLFGK*PSGLCE
Trigger: CTCACACAGTCCTGAAGGGCACTTCCCAAAGAGCAC...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTTCTGCTTCCTGGCCATaGTCTCGCTCTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGSASWP*SRSSSV
Trigger: CACAGATGAAGAGCGAGAGCATGGCCAGGAAGCAGA...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGTCCTGGTGGGCCGAGTaGTGGACCGCGTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLSWWAE*WTASAS
Trigger: GGAAGCAGACGCGGTCCAGCACTCGGCCCACCAGGA...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCATGGAGACATGGGCCTaGTGGAAGCCCAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLMETWA*WKPKDE
Trigger: CTCATCCTTGGGCTTCCAGCAGGCCCATGTCTCCAT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATCCAAGATCGCACCACTaGACTCTGGCCTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDPRSHH*TLAWVK
Trigger: TTTCACCCAGGCCAGAGTGCAGTGGTGCGATCTTGG...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATCAGGATGAGTGGGGTTaGCAAGATAGGGCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDQDEWG*QDRAVG
Trigger: TCCCACTGCCCTATCTTGGCAACCCCACTCATCCTG...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCATTACCCCTTGATCCATaGGCTGCAGAATGGATGTTG +
Preference number: 4 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSLPLDP*AAEWML
Trigger: CAACATCCATTCTGCAGCCCATGGATCAAGGGGTAA...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGTACTCTTTTTGCTGGTaGAGGGTCTTGCCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEYSFCW*RVLPRG
Trigger: ACCTCGAGGCAAGACCCTCCACCAGCAAAAAGAGTA...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCGACGACAGGATATGCTaGCAGGAGGGGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLDDRIC*QEGTLE
Trigger: TTCCAAGGTCCCCTCCTGCCAGCATATCCTGTCGTC...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACAGTCAGCACACACGTaGGATTGGCTAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLQSAHT*DWLAHP
Trigger: AGGATGAGCTAGCCAATCCCACGTGTGTGCTGACTG...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGTAATCCCAGTACTTTaGGAGGCCGAGGCGAGTGGA +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRVIPVL*EAEASG
Trigger: TCCACTCGCCTCGGCCTCCCAAAGTACTGGGATTAC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTGGTGGGTGGACTGCTTaGGCTCAGGAGCCCACGAAC +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSGGWTA*AQEPTN
Trigger: GTTCGTGGGCTCCTGAGCTCAAGCAGTCCACCCACC...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGGGGTGGAGGTGGAGTaGGTACCTGGGCTTGGAACC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLGVEVE*VPGLGT
Trigger: GGTTCCAAGCCCAGGTACTCACTCCACCTCCACCCC...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATTGCTGGACTCAGGGCTaGCACAAACCCTCCATTTGT +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDCWTQG*HKPSIC
Trigger: ACAAATGGAGGGTTTGTGGCAGCCCTGAGTCCAGCA...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGAGTCGTACTCTTTTTaGTGGTGGAGGGTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGESYSF*WWRVLP
Trigger: AGGCAAGACCCTCCACCAGCAAAAAGAGTACGACTC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGCCTCACTCTTGTCATaGAAGTTGGAGTGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRASLLS*KLEWSG
Trigger: GCCACTCCACTCCAACTTGCATGACAAGAGTGAGGC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGTGCTGGACCGCGTCTaGTTCCTGGCCATGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLVLDRV*FLAMLS
Trigger: CGAGAGCATGGCCAGGAAGCAGACGCGGTCCAGCAC...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTGAGGAGGTGGCCCTCTaGCTGCCTCGCAGTGAACTC +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSEEVAL*LPRSEL
Trigger: GAGTTCACTGCGAGGCAGGCAGAGGGCCACCTCCTC...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCCGGGTCACAAGGACCTaGACAGAGGCAGAACTGAGG +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPRVTRT*TEAELR
Trigger: CCTCAGTTCTGCCTCTGTCCAGGTCCTTGTGACCCG...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGAGTGCGTCCCGCACTaGAGGAAGAGGAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRECVPH*RKRKVF
Trigger: AAAAACCTTCCTCTTCCTCCAGTGCGGGACGCACTC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGAGTCCGAGAGTGGTTaGGGGTGGGCCGTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLESESG*GWAVAS
Trigger: ACTAGCCACGGCCCACCCCCAACCACTCTCGGACTC...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACCTAAGTGTGCTCTTTaGGAAGTGCCCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLPKCAL*EVPFRT
Trigger: AGTCCTGAAGGGCACTTCCCAAAGAGCACACTTAGG...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTGACCCAGGGAAGACCTaGTGCCGCCGCTGGTTATCC +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSDPGKT*CRRWLS
Trigger: GGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATGGTGGAGTGAGTACCTaGGCTTGGAACCGTGATAGA +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDGGVST*AWNRDR
Trigger: TCTATCACGGTTCCAAGCCCAGGTACTCACTCCACC...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTACATGCACAGTGTGTTTaGAGCAAGAGCAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLHAQCV*SKSRVR
Trigger: TCTGACTCTGCTCTTGCTTCAAACACACTGTGCATG...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGTTTACAAGTTCTCCCTaGAAGAGGGCAGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEFTSSP*KRAVTR
Trigger: TCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAA...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGCTCCAAGCACAGGATTaGTGTCTTTGGGATTCAATC +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPELQAQD*CLWDSI
Trigger: GATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAG...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCCTTCGGACTTGGGACTaGCTCCCCTTTTACAAGTTC +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLLRTWD*LPFYKF
Trigger: GAACTTGTAAAAGGGGAGCCAGTCCCAAGTCCGAAG...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGATGAGGAGTGGTTCCTaGTGGGCCGAGTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLMRSGS*WAECWT
Trigger: GGTCCAGCACTCGGCCCACCAGGAACCACTCCTCAT...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCCAGGAAATGGAGACATaGGCCTGCTGGAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPQEMET*ACWKPK
Trigger: CTTGGGCTTCCAGCAGGCCCATGTCTCCATTTCCTG...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCATTAATGTTGACAATTTaGCCTCCTCCCATGAATCAC +
Preference number: 4 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSLMLTI*PPPMNH
Trigger: GTGATTCATGGGAGGAGGTCAAATTGTCAACATTAA...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCTGCCACATAAAGGCCTaGCGACAGGATATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPCHIKA*RQDMLA
Trigger: TGCCAGCATATCCTGTCGTCAGGCCTTTATGTGGCA...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATTCATTCCCATCAGTCTaGAGCCCGAAGGACTGTTTT +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDSFPSV*SPKDCF
Trigger: AAAACAGTCCTTCGGGCTTCAGACTGATGGGAATGA...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCGCCACGTTCTCCTACTaGGGTCCTAAGTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPATFSY*GPKCAL
Trigger: AAGAGCACACTTAGGACCTCAGTAGGAGAACGTGGC...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGCCAGCAGAGTCACTTTaGCAATGTAAGCTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRPAESL*QCKLSQ
Trigger: CTGACTCAGCTTACATTGTCAAAGTGACTCTGCTGG...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATGGCTTAAGGGAATGTTaGGGCTGGTCTGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDGLREC*GWSDLL
Trigger: TAGAAGATCAGACCAGCCGCAACATTCCCTTAAGCC...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTAGCTTCTGGATAACTTaGTGCAGCTTCTACATCAGC +
Preference number: 4 (lower is better)
Translates to: GGELQSGRESDDSGAISGSFWIT*CSFYIS
Trigger: GCTGATGTAGAAGCTGCAGCAAGTTATCCAGAAGCT...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGGCCCTTGTTGCACATaGAGATTCCCAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLGPCCT*RFPGLS
Trigger: GGACAGGCCTGGGAATCTGCATGTGCAACAAGGGCC...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCAGGGAATGTTGCGGCTaGTCTGATCTTCTATCCAGA +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLRECCG*SDLLSR
Trigger: TCTGGATAGAAGATCAGACCAGCCGCAACATTCCCT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGAGGTTGGGGTGGCTGTaGCAATTTCCTAAAATAAGA +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPERLGWL*QFPKIR
Trigger: TCTTATTTTAGGAAATTGCCACAGCCACCCCAACCT...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTAGCCTCCCAAGTAGCTaGCACCACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSSLPSS*HHRHAP
Trigger: TGGTGCATGCCTGTGGTGCCAGCTACTTGGGAGGCT...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCATGTTGCGGCTGGTCTaGTCTTCTATCCAGACCACT +
Preference number: 4 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPMLRLV*SSIQTT
Trigger: AGTGGTCTGGATAGAAGATCAGACCAGCCGCAACAT...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCACTTACTTCCTCCACTaGAGTCTTGAACCCCTCATA +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLTYFLH*SLEPLI
Trigger: TATGAGGGGTTCAAGACTTCAGTGGAGGAAGTAAGT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGCTCAAGCAATGCTCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLLKQCS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGAGCATTGCTTGAG...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTAGTTAGGGCTTTGTTCTaGATTAGGCTTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: HALALHLWHSWHLPHGPLVRALF*IRLWLK
Trigger: CTTAAGCCAAAGCCTAATCCAGAACAAAGCCCTAAC...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTCTTGGGAGGACAAGGTaGGTGGACTGCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSLGRTR*VDCLSS
Trigger: TGAGCTCAAGCAGTCCACCCACCTTGTCCTCCCAAG...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGACAGCAGATGAGTGCTaGAGAAGTGCCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLTADEC*RSAQVR
Trigger: CCTGACCTGGGCACTTCTCCAGCACTCATCTGCTGT...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGTTTGCATTTACAACTTaGCTAACTGTTTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRFAFTT*LTVCRR
Trigger: CCTGCGGCAAACAGTTAGCCAAGTTGTAAATGCAAA...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTCTCGCTCTTCATCTGTaGCACAGCTGGCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSLALHL*HSWHLP
Trigger: AGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAG...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 72 bp ATTCATTCCCATCAGTCTGAAGCCCGAAGGACTGTTTaGTATAATACCTTCGGACTTGGGACTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: IHSHQSEARRTV*YNTFGLGTGSP
Trigger: AGGGGAGCCAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGATGGGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGAGAGATACCAGAGAGTaGGTCCCGCACTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLRDTRE*VPHWRK
Trigger: CTTCCTCCAGTGCGGGACGCACTCTCTGGTATCTCT...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGAGAAGGTTTTCAATTTaGTTTGCCCAGATCCATCAG +
Preference number: 4 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRRRFSI*FAQIHQ
Trigger: CTGATGGATCTGGGCAAAGCAAATTGAAAACCTTCT...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGCTGGTGATTCTGATGTaGACTGAAGTTTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLLVILM*TEVWGP
Trigger: GGGTCCCCAAACTTCAGTGCACATCAGAATCACCAG...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGATGGTAAATAAGCATTaGCTTCAACTTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPEMVNKH*LQLKVT
Trigger: GGTGACTTTAAGTTGAAGCCAATGCTTATTTACCAT...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCCTCCTCACAGCAGTATaGATAAGCAAGAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLLLTAV*ISKSHY
Trigger: ATAATGACTCTTGCTTATCCATACTGCTGTGAGGAG...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGGGAAACAGTCTGAGCTaGAGTCCGAGAGTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLGNSLS*SPRVVG
Trigger: CCCAACCACTCTCGGACTCCAGCTCAGACTGTTTCC...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTCACAGAGACACCAAGTaGGCACATGCTGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSHRDTK*AHAVGK
Trigger: TTTTCCAACAGCATGTGCTCACTTGGTGTCTCTGTG...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTGCATTTTTCTGCCACTaGCCACAAGACGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSAFFCH*PQDDFL
Trigger: CAGGAAATCGTCTTGTGGTCAGTGGCAGAAAAATGC...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCAGAAACCACTTTCTTTaGGCATCCATAAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLRNHFL*ASIRNN
Trigger: GTTGTTTCTTATGGATGCGCAAAGAAAGTGGTTTCT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCAGCTTCTTTCAAAATTaGAGTCAATCCTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLSFFQN*SQSSQT
Trigger: GGTTTGAGAGGATTGACTCCAATTTTGAAAGAAGCT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTCAGGATTGCTGTCTTTaGGATTCAATCACCAGCAAG +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSQDCCL*DSITSK
Trigger: CTTGCTGGTGATTGAATCCCAAAGACAGCAATCCTG...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGTGGGAGTCACACACGTaGGTCACACTGAGTCTTATC +
Preference number: 4 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLWESHT*VTLSLI
Trigger: GATAAGACTCAGTGTGACCCACGTGTGTGACTCCCA...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR GCA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTTTCAAACTTTTCTTCTaGAGCTTCCACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSFKLFF*SFHTSL
Trigger: GAGAGAGGTGTGGAAGCTGCAGAAGAAAAGTTTGAA...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGCTTCTTCCCAAAGGATaGTTAAGACAAGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLLLPKG*LRQGRA
Trigger: AGCTCTTCCTTGTCTTAACCATCCTTTGGGAAGAAG...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGCTCCCACTTGAGTCTTaGGATTACAGGCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLLPLES*DYRHKP
Trigger: TGGCTTATGCCTGTAATCCCAAGACTCAAGTGGGAG...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CCA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGTTCTGGATTAGGCTTTaGCTTAAGGGAATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLFWIRL*LKGMLR
Trigger: CCGCAACATTCCCTTAAGCCAAAGCCTAATCCAGAA...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 72 bp AAATATGCCCTCCCTCCAAGCACAGGATTGCTGTCTTaGGGATTCAATCACCAGCAAGTTCGTATTATTTAC +
Preference number: 4 (lower is better)
Translates to: KYALPPSTGLLS*GFNHQQVRIIY
Trigger: GTAAATAATACGAACTTGCTGGTGATTGAATCCCAAAGACAGCAATCCTGTGCTTGGAGGGAGGGCATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR TCA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGGTGAAGCTTTTCGCATaGGTTGACTCTTCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLVKLFA*VDSSFH
Trigger: ATGAAAGGAAGAGTCAACTCATGCGAAAAGCTTCAC...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
3UTR CAA 72 bp CTCTCTGAAAGCCTCAGAGGGCAGAGGATTAGCTCCTaGTACACAATAAACACTCAAATGTTAACATTAGCT +
Preference number: 4 (lower is better)
Translates to: LSESLRGQRISS*YTINTQMLTLA
Trigger: AGCTAATGTTAACATTTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTGCCCTCTGAGGCTTTCAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCTGGCAGGAGGGGACCTaGGAAATATGCCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAWQEGT*EICPPS
Trigger: GGAGGGAGGGCATATTTCCAAGGTCCCCTCCTGCCA...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACAGCACACACGTGGGATaGGCTAGCTCATCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: CPGMLPPWSLAAQALHANSTHVG*ASSSWH
Trigger: GTGCCAGGATGAGCTAGCCAATCCCACGTGTGTGCT...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGGCACAGCTGGCATCTTCCTCATGGCCCACTACAACCGGGTGCCGGCCCTGCCCCACAAACCCTCCATTaGTTTTCAGAATGCCCTATC +
Preference number: 5 (lower is better)
Translates to: WHSWHLPHGPLQPGAGPAPQTLH*FSECPI
Trigger: GATAGGGCATTCTGAAAACAAATGGAGGGTTTGTGG...GGCAGGGCCGGCACCCGGTTGTAGTGGGCCATGAGGAAGATGCCAGCTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCAAGCCTGCAACCTCATaGCCTGTGCCCGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLKPATS*PVPGTS
Trigger: GCTGGTGCCGGGCACAGGCAATGAGGTTGCAGGCTT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GACCCAGGGAAGACCTGGTGCCGCCGCTGGTTATCCCACACCTGCCTCCCACCCAGCTTTTCGCATGAGTaGACTCTTCCTTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: DPGKTWCRRWLSHTCLPPSFSHE*TLPFMK
Trigger: TTTCATGAAAGGAAGAGTCAACTCATGCGAAAAGCT...GGGTGGGAGGCAGGTGTGGGATAACCAGCGGCGGCACCAGGTCTTCCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp CCGACAAAGGAAAGCCTCCGGGAGGTCAAAAGAGATACCAGAGAGTaGGTCCCGCACTGGAGGAAGAGGAAGGTTTTTACCAAGCAGCGA +
Preference number: 5 (lower is better)
Translates to: PTKESLREVKRDTRE*VPHWRKRKVFTKQR
Trigger: TCGCTGCTTGGTAAAAACCTTCCTCTTCCTCCAGTGCGGGACGCACTCTCTGGTATCTCTTTTGACCTCCCGGAGGCTTTCCTTTGTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 90 bp GCCCTATCTGCGAAGCGTAATAAAACGAGGTATGCCATAGTACAGTaGCGCCGCGACCGACAAAGGAAAGCCTCCGGGAGGTCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: ALSAKRNKTRYAIVQ*RRDRQRKASGRSKE
Trigger: CTCTTTTGACCTCCCGGAGGCTTTCCTTTGTCGGTCGCGGCGCCACTGTACTATGGCATACCTCGTTTTATTACGCTTCGCAGATAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 90 bp TGTTGTGTCTCAGGGAATAGGGAGGCCCAAGAAGAGGGAGAGAGATaGGGAACGGTCTGTGGGTGGAGCGGTCAGAACACACACAACATT +
Preference number: 5 (lower is better)
Translates to: CCVSGNREAQEEGER*GTVCGWSGQNTHNI
Trigger: AATGTTGTGTGTGTTCTGACCGCTCCACCCACAGACCGTTCCCCATCTCTCTCCCTCTTCTTGGGCCTCCCTATTCCCTGAGACACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGCCCCGGTATGCTGCCTCCATGGTCCCTAGCAGCACAAGCCCTTCACGCCAACACTTGCTGCTTCACCTaGTGCTTTTATGTTATGGAA +
Preference number: 5 (lower is better)
Translates to: CPGMLPPWSLAAQALHANTCCFT*CFYVME
Trigger: TTCCATAACATAAAAGCACAAGGTGAAGCAGCAAGT...GTTGGCGTGAAGGGCTTGTGCTGCTAGGGACCATGGAGGCAGCATACCGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp CATGCTCTCGCTCTTCATCTGTGGCACAGCTGGCATCTTCCTCATGGCCCACTATTACAGATGAGGACGTaGAGGCGCAGAGAGGTTAAG +
Preference number: 5 (lower is better)
Translates to: HALALHLWHSWHLPHGPLLQMRT*RRREVK
Trigger: CTTAACCTCTCTGCGCCTCAACGTCCTCATCTGTAA...TAGTGGGCCATGAGGAAGATGCCAGCTGTGCCACAGATGAAGAGCGAGAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCACAGAAGGTTTTCAATTaGCTTTGCCCAGATCCATCA +
Preference number: 5 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSQKVFN*LCPDPS
Trigger: TGATGGATCTGGGCAAAGCAAATTGAAAACCTTCTG...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp CTGACTCTGACCCAATCTGACACTCTAAGATTCTACGGCCTGAAAAACAGGCCCGGTCTTGCCTCGAGGTaGATGGTTGCTGACTGGTCA +
Preference number: 5 (lower is better)
Translates to: LTLTQSDTLRFYGLKNRPGLASR*MVADWS
Trigger: TGACCAGTCAGCAACCATCAACCTCGAGGCAAGACC...GGGCCTGTTTTTCAGGCCGTAGAATCTTAGAGTGTCAGATTGGGTCAGAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGGCATGCACAGTGTGTTaGAAGCAAGAGCAGAGTCAG +
Preference number: 5 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRACTVC*KQEQSQ
Trigger: CTGACTCTGCTCTTGCTTCAAACACACTGTGCATGC...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp ATCAGTCTGAAGCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGAGCCGGCACACGAGTTaGGCTGGTAACCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: ISLKPEGLFCIIPSDLGLSRHTS*AGNQGT
Trigger: TGTCCCCTGGTTACCAGCCAAACTCGTGTGCCGGCT...CAGTCCCAAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGCTTCAGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp AACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGGCTGTTCCCTCACAGAGGATTAGCTCCTaGTACACAATAAACACTCAA +
Preference number: 5 (lower is better)
Translates to: NQGTPLGKSPMLPEAVPSQRISS*YTINTQ
Trigger: TTGAGTGTTTATTGTGTACAAGGAGCTAATCCTCTG...TGAGGGAACAGCCTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGGGACTGGCTCCCCTTTTACAAGTTCTCCCTGAAAGAGGGCAGTCACAAGAGGATAATACCTTCGGACTaGGGACTGGCTCCCCTTTTA +
Preference number: 5 (lower is better)
Translates to: WDWLPFYKFSLKEGSHKRIIPSD*GLAPLL
Trigger: TAAAAGGGGAGCCAGTCCCAAGTCCGAAGGTATTAT...CCTCTTGTGACTGCCCTCTTTCAGGGAGAACTTGTAAAAGGGGAGCCAGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGCCCGAAGGACTGTTTaGTATAATACCTTCGGACTT +
Preference number: 5 (lower is better)
Translates to: GGELQSGRESDDSGAISGARRTV*YNTFGL
Trigger: AAGTCCGAAGGTATTATACAAAACAGTCCTTCGGGC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GCCATTTCCGGTTCCCACCAGCCCCTTACTAGTTGTGTATCTGGCACAAGTCTCAAGCTTCTGGATAACTaGCTGCAGCTTCTACATCAG +
Preference number: 5 (lower is better)
Translates to: AISGSHQPLTSCVSGTSLKLLDN*LQLLHQ
Trigger: CTGATGTAGAAGCTGCAGCAAGTTATCCAGAAGCTT...GAGACTTGTGCCAGATACACAACTAGTAAGGGGCTGGTGGGAACCGGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GGGGGAGAACTTCAATCAGGGAGGGAATCTGATGACAGTGGGGCCATTTCCGGTGTGGTTAAACAAGGTTaGAAGTCCAGAATTCCTGAC +
Preference number: 5 (lower is better)
Translates to: GGELQSGRESDDSGAISGVVKQG*KSRIPD
Trigger: GTCAGGAATTCTGGACTTCAAACCTTGTTTAACCAC...ACCGGAAATGGCCCCACTGTCATCAGATTCCCTCCCTGATTGAAGTTCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATTCAGCTTTCATAGAGTaGAAGAGAGTTAGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDSAFIE*KRVRAL
Trigger: CAAAGCCCTAACTCTCTTCAACTCTATGAAAGCTGA...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp AGTTTGGCTGGTAACCAGGGGACACCCTTGGGCAAGTCACCTATGCTCCCTGAGCTAATTCTAGTTCTTTaGCTATTTCCACCACATCTG +
Preference number: 5 (lower is better)
Translates to: SLAGNQGTPLGKSPMLPELILVL*LFPPHL
Trigger: CAGATGTGGTGGAAATAGCAAAAGAACTAGAATTAG...CTCAGGGAGCATAGGTGACTTGCCCAAGGGTGTCCCCTGGTTACCAGCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp TGGAACCGTGATAGAGACAGGATGAGTGGGGTTGCCAAGATAGGGCAGTGGGATGAGCTTCTTTCAAAATaGGAGTCAATCCTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: WNRDRDRMSGVAKIGQWDELLSK*ESILSN
Trigger: GTTTGAGAGGATTGACTCCAATTTTGAAAGAAGCTC...ATCCCACTGCCCTATCTTGGCAACCCCACTCATCCTGTCTCTATCACGGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp TCCTTCAAGAACTTTTCCTTTGCATTTACAACTTGGCTAACTGTTTaGCGCAGGAGGCCTAGCCTTCGGCCTATCTCGGCTTTTGACATA +
Preference number: 5 (lower is better)
Translates to: SFKNFSFAFTTWLTV*RRRPSLRPISAFDI
Trigger: TATGTCAAAAGCCGAGATAGGCCGAAGGCTAGGCCTCCTGCGGCAAACAGTTAGCCAAGTTGTAAATGCAAAGGAAAAGTTCTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp GAGTTAGGGCTTTGTTCTGGATTAGGCTTTGGCTTAAGGGAATGTTaGGGCTGGTCTGATCTTCTATCCAGACCACTAAAACCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: ELGLCSGLGFGLREC*GWSDLLSRPLKPSP
Trigger: TGGAGAAGGTTTTAGTGGTCTGGATAGAAGATCAGACCAGCCGCAACATTCCCTTAAGCCAAAGCCTAATCCAGAACAAAGCCCTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 90 bp GGGCTTTGTTCTGGATTAGGCTTTGGCTTAAGGGAATGTTGCGGCTaGTCTGATCTTCTATCCAGACCACTAAAACCTTCTCCATATCAG +
Preference number: 5 (lower is better)
Translates to: GLCSGLGFGLRECCG*SDLLSRPLKPSPYQ
Trigger: CTGATATGGAGAAGGTTTTAGTGGTCTGGATAGAAGATCAGACCAGCCGCAACATTCCCTTAAGCCAAAGCCTAATCCAGAACAAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTCATACCTCAAAGACATaGCAGGTTCAGTTCCAGACC +
Preference number: 5 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSHTSKT*QVQFQT
Trigger: GGTCTGGAACTGAACCTGCAATGTCTTTGAGGTATG...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 90 bp AATTACCAAAATGTAACACAGAGACACCAAGTGAGCACATGCTGTTaGAAAAATGGCGCTGATACAATTGCTGGACTCAGGGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: NYQNVTQRHQVSTCC*KNGADTIAGLRAAT
Trigger: TGTGGCAGCCCTGAGTCCAGCAATTGTATCAGCGCCATTTTTCCAACAGCATGTGCTCACTTGGTGTCTCTGTGTTACATTTTGGTAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp GCATCTAAAATGGTGAATCCTTTCCAGAAGGTTTTCAATTTGCTTTaGCCAGATCCATCAGAGACATCACTATCCATGGCAGCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: ASKMVNPFQKVFNLL*PDPSETSLSMAARA
Trigger: GGCTCTAGCTGCCATGGATAGTGATGTCTCTGATGGATCTGGGCAAAGCAAATTGAAAACCTTCTGGAAAGGATTCACCATTTTAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGAGCATGCGATGCTGTTaGATAGCATTTTGCCCACAG +
Preference number: 5 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLSMRCC*IAFCPQ
Trigger: CTGTGGGCAAAATGCTATCAAACAGCATCGCATGCT...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp TTTGAGAATTACCAAAATGTAACACAGAGACACCAAGTGAGCACATaGTGTTGGAAAAATGGCGCTGATACAATTGCTGGACTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: FENYQNVTQRHQVST*CWKNGADTIAGLRA
Trigger: AGCCCTGAGTCCAGCAATTGTATCAGCGCCATTTTTCCAACAGCATGTGCTCACTTGGTGTCTCTGTGTTACATTTTGGTAATTCTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp CTTAAACCTCATGAACCAACCTCTGCTAGCTTCAAACTTTTCTTCTaGAGCTTCCACACCTCTCTCAGCTTTCATAGAGTTGAAGAGAGT +
Preference number: 5 (lower is better)
Translates to: LKPHEPTSASFKLFF*SFHTSLSFHRVEES
Trigger: ACTCTCTTCAACTCTATGAAAGCTGAGAGAGGTGTGGAAGCTGCAGAAGAAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAGGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGACAGGATTGCTGTCTTaGGGATTCAATCACCAGCAA +
Preference number: 5 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLTGLLS*GFNHQQ
Trigger: TTGCTGGTGATTGAATCCCAAAGACAGCAATCCTGT...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 90 bp ACATCAGCACTTGCTGCTTCACCTTGTGCTTTTATGTTATGGAAATaGCTTCTTTCCTTAAACCTCATGAACCAACCTCTGCTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: TSALAASPCAFMLWK*LLSLNLMNQPLLAS
Trigger: TGAAGCTAGCAGAGGTTGGTTCATGAGGTTTAAGGAAAGAAGCCATTTCCATAACATAAAAGCACAAGGTGAAGCAGCAAGTGCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp CATCTTCTCTGCCTGTTTCTCCTCCATTCTACTCCCAAACCTTACCCTTTCTCTTACATTGAAAATCTGTaGTTTAGTGTAGCCACCTTC +
Preference number: 5 (lower is better)
Translates to: HLLCLFLLHSTPKPYPFSYIENL*FSVATF
Trigger: GAAGGTGGCTACACTAAACAACAGATTTTCAATGTA...AGAGAAAGGGTAAGGTTTGGGAGTAGAATGGAGGAGAAACAGGCAGAGAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS-3UTR CAA 90 bp GGATTCAATCACCAGCAAGTTCGTATTATTTACTCCAGTGTGAGTCTGTGTCTGGTTAATGTTGACAATTaGACCTCCTCCCATGAATCA +
Preference number: 5 (lower is better)
Translates to: GFNHQQVRIIYSSVSLCLVNVDN*TSSHES
Trigger: TGATTCATGGGAGGAGGTCAAATTGTCAACATTAAC...CAGACACAGACTCACACTGGAGTAAATAATACGAACTTGCTGGTGATTGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 90 bp GCATCTTCACCAGGTGTAGATTCCATCTCAAGAAACCACTTTCTTTaGGCATCCATAAGAAACAACTCCTCATCTGTTAAAGTTTTATCA +
Preference number: 5 (lower is better)
Translates to: ASSPGVDSISRNHFL*ASIRNNSSSVKVLS
Trigger: TGATAAAACTTTAACAGATGAGGAGTTGTTTCTTATGGATGCGCAAAGAAAGTGGTTTCTTGAGATGGAATCTACACCTGGTGAAGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS TCA 72 bp GCTGGTGGAGGGTCTTGCCTCGAGGTTGATGGTTGCTaGCTGGTCAGGGTGGTGGCTGCTGAAGGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: AGGGSCLEVDGC*LVRVVAAEGWG
Trigger: ACCCCAACCTTCAGCAGCCACCACCCTGACCAGTCAGCAACCATCAACCTCGAGGCAAGACCCTCCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp GCCTCGAGGTTGATGGTTGCTGACTGGTCAGGGTGGTaGCTGCTGAAGGTTGGGGTGGCTGTGGCAATTTCC +
Preference number: 6 (lower is better)
Translates to: ASRLMVADWSGW*LLKVGVAVAIS
Trigger: GGAAATTGCCACAGCCACCCCAACCTTCAGCAGCCACCACCCTGACCAGTCAGCAACCATCAACCTCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp CTTGCCTCGAGGTTGATGGTTGCTGACTGGTCAGGGTaGTGGCTGCTGAAGGTTGGGGTGGCTGTGGCAATT +
Preference number: 6 (lower is better)
Translates to: LASRLMVADWSG*WLLKVGVAVAI
Trigger: AATTGCCACAGCCACCCCAACCTTCAGCAGCCACCACCCTGACCAGTCAGCAACCATCAACCTCGAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp GCGAAGCGTAATAAAACGAGGTATGCCATAGTACAGTaGCGCCGCGACCGACAAAGGAAAGCCTCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: AKRNKTRYAIVQ*RRDRQRKASGR
Trigger: CCTCCCGGAGGCTTTCCTTTGTCGGTCGCGGCGCCACTGTACTATGGCATACCTCGTTTTATTACGCTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 72 bp GTACTCTTTTTGCTGGTGGAGGGTCTTGCCTCGAGGTaGATGGTTGCTGACTGGTCAGGGTGGTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: VLFLLVEGLASR*MVADWSGWWLL
Trigger: CAGCAGCCACCACCCTGACCAGTCAGCAACCATCAACCTCGAGGCAAGACCCTCCACCAGCAAAAAGAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp GAAAGCCTCCGGGAGGTCAAAAGAGATACCAGAGAGTaGGTCCCGCACTGGAGGAAGAGGAAGGTTTTTACC +
Preference number: 6 (lower is better)
Translates to: ESLREVKRDTRE*VPHWRKRKVFT
Trigger: GGTAAAAACCTTCCTCTTCCTCCAGTGCGGGACGCACTCTCTGGTATCTCTTTTGACCTCCCGGAGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp GAGGTCAAAAGAGATACCAGAGAGTGCGTCCCGCACTaGAGGAAGAGGAAGGTTTTTACCAAGCAGCGAGTC +
Preference number: 6 (lower is better)
Translates to: EVKRDTRECVPH*RKRKVFTKQRV
Trigger: GACTCGCTGCTTGGTAAAAACCTTCCTCTTCCTCCAGTGCGGGACGCACTCTCTGGTATCTCTTTTGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 72 bp GCCCCTAACAAGAGAGTCAGCCTGTCCTTTGAAGCTTaGAAGCCAGGCACTGACTTCTCCTCTCTAGCTATG +
Preference number: 6 (lower is better)
Translates to: APNKRVSLSFEA*KPGTDFSSLAM
Trigger: CATAGCTAGAGAGGAGAAGTCAGTGCCTGGCTTCAAAGCTTCAAAGGACAGGCTGACTCTCTTGTTAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp AACTTTTCCTTTGCATTTACAACTTGGCTAACTGTTTaGCGCAGGAGGCCTAGCCTTCGGCCTATCTCGGCT +
Preference number: 6 (lower is better)
Translates to: NFSFAFTTWLTV*RRRPSLRPISA
Trigger: AGCCGAGATAGGCCGAAGGCTAGGCCTCCTGCGGCAAACAGTTAGCCAAGTTGTAAATGCAAAGGAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 90 bp GCTGCATTAGCCCCTAACAAGAGAGTCAGCCTGTCCTTTGAAGCTTaGAAGCCAGGCACTGACTTCTCCTCTCTAGCTATGAAAGTTCTA +
Preference number: 6 (lower is better)
Translates to: AALAPNKRVSLSFEA*KPGTDFSSLAMKVL
Trigger: TAGAACTTTCATAGCTAGAGAGGAGAAGTCAGTGCCTGGCTTCAAAGCTTCAAAGGACAGGCTGACTCTCTTGTTAGGGGCTAATGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS TCA 72 bp TGCTATTTCCACCACATCTGCACTTACTTCCTCCACTaGAGTCTTGAACCCCTCATAGTCATCAATGAGGGT +
Preference number: 6 (lower is better)
Translates to: CYFHHICTYFLH*SLEPLIVINEG
Trigger: ACCCTCATTGATGACTATGAGGGGTTCAAGACTTCAGTGGAGGAAGTAAGTGCAGATGTGGTGGAAATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp TCTGGATTAGGCTTTGGCTTAAGGGAATGTTGCGGCTaGTCTGATCTTCTATCCAGACCACTAAAACCTTCT +
Preference number: 6 (lower is better)
Translates to: SGLGFGLRECCG*SDLLSRPLKPS
Trigger: AGAAGGTTTTAGTGGTCTGGATAGAAGATCAGACCAGCCGCAACATTCCCTTAAGCCAAAGCCTAATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp GCTTTCATAGAGTTGAAGAGAGTTAGGGCTTTGTTCTaGATTAGGCTTTGGCTTAAGGGAATGTTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: AFIELKRVRALF*IRLWLKGMLRL
Trigger: CAGCCGCAACATTCCCTTAAGCCAAAGCCTAATCCAGAACAAAGCCCTAACTCTCTTCAACTCTATGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 72 bp TCTGCAGCTTCCACACCTCTCTCAGCTTTCATAGAGTaGAAGAGAGTTAGGGCTTTGTTCTGGATTAGGCTT +
Preference number: 6 (lower is better)
Translates to: SAASTPLSAFIE*KRVRALFWIRL
Trigger: AAGCCTAATCCAGAACAAAGCCCTAACTCTCTTCAACTCTATGAAAGCTGAGAGAGGTGTGGAAGCTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS TCA 72 bp GGGTGGCTGTGGCAATTTCCTAAAATAAGACATCGGTaGAGCTTTTCGCATGAGTTGACTCTTCCTTTCATG +
Preference number: 6 (lower is better)
Translates to: GWLWQFPKIRHR*SFSHELTLPFM
Trigger: CATGAAAGGAAGAGTCAACTCATGCGAAAAGCTTCACCGATGTCTTATTTTAGGAAATTGCCACAGCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp CTTTGTTCTGGATTAGGCTTTGGCTTAAGGGAATGTTaGGGCTGGTCTGATCTTCTATCCAGACCACTAAAA +
Preference number: 6 (lower is better)
Translates to: LCSGLGFGLREC*GWSDLLSRPLK
Trigger: TTTTAGTGGTCTGGATAGAAGATCAGACCAGCCGCAACATTCCCTTAAGCCAAAGCCTAATCCAGAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp CATGAACCAACCTCTGCTAGCTTCAAACTTTTCTTCTaGAGCTTCCACACCTCTCTCAGCTTTCATAGAGTT +
Preference number: 6 (lower is better)
Translates to: HEPTSASFKLFF*SFHTSLSFHRV
Trigger: AACTCTATGAAAGCTGAGAGAGGTGTGGAAGCTGCAGAAGAAAAGTTTGAAGCTAGCAGAGGTTGGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp TACCAAAATGTAACACAGAGACACCAAGTGAGCACATaGTGTTGGAAAAATGGCGCTGATACAATTGCTGGA +
Preference number: 6 (lower is better)
Translates to: YQNVTQRHQVST*CWKNGADTIAG
Trigger: TCCAGCAATTGTATCAGCGCCATTTTTCCAACAGCATGTGCTCACTTGGTGTCTCTGTGTTACATTTTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp ATGGTGAATCCTTTCCAGAAGGTTTTCAATTTGCTTTaGCCAGATCCATCAGAGACATCACTATCCATGGCA +
Preference number: 6 (lower is better)
Translates to: MVNPFQKVFNLL*PDPSETSLSMA
Trigger: TGCCATGGATAGTGATGTCTCTGATGGATCTGGGCAAAGCAAATTGAAAACCTTCTGGAAAGGATTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 72 bp GATAGCATTTTGCCCACAGTAGAGCTTCTTTCAAAATaGGAGTCAATCCTCTCAAACCCTGCTGCTGCTTTA +
Preference number: 6 (lower is better)
Translates to: DSILPTVELLSK*ESILSNPAAAL
Trigger: TAAAGCAGCAGCAGGGTTTGAGAGGATTGACTCCAATTTTGAAAGAAGCTCTACTGTGGGCAAAATGCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp TGCTTTGCCCAGATCCATCAGAGACATCACTATCCATaGCAGCTAGAGCCTTATGAAATGTATTTCTCAAAT +
Preference number: 6 (lower is better)
Translates to: CFAQIHQRHHYP*QLEPYEMYFSN
Trigger: ATTTGAGAAATACATTTCATAAGGCTCTAGCTGCCATGGATAGTGATGTCTCTGATGGATCTGGGCAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 72 bp TCTCAAATAATAAGACTTGAAGGTCGAAATTACCCCTaGATCCATGGGCTGCAGAATGGATGTTGTGTTAGC +
Preference number: 6 (lower is better)
Translates to: SQIIRLEGRNYP*IHGLQNGCCVS
Trigger: GCTAACACAACATCCATTCTGCAGCCCATGGATCAAGGGGTAATTTCGACCTTCAAGTCTTATTATTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 90 bp ATGCTGTTTGATAGCATTTTGCCCACAGTAGAGCTTCTTTCAAAATaGGAGTCAATCCTCTCAAACCCTGCTGCTGCTTTATCAACTAAG +
Preference number: 6 (lower is better)
Translates to: MLFDSILPTVELLSK*ESILSNPAAALSTK
Trigger: CTTAGTTGATAAAGCAGCAGCAGGGTTTGAGAGGATTGACTCCAATTTTGAAAGAAGCTCTACTGTGGGCAAAATGCTATCAAACAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS TCA 72 bp TTAATCTCCTCGTATATCTCCATCAGAGCTCTTGGATaGCTAGGGGCATTGTCAATGAGCAGTAATATTTTG +
Preference number: 6 (lower is better)
Translates to: LISSYISIRALG*LGALSMSSNIL
Trigger: CAAAATATTACTGCTCATTGACAATGCCCCTAGTCATCCAAGAGCTCTGATGGAGATATACGAGGAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS GCA 72 bp CCAGGTGTAGATTCCATCTCAAGAAACCACTTTCTTTaGGCATCCATAAGAAACAACTCCTCATCTGTTAAA +
Preference number: 6 (lower is better)
Translates to: PGVDSISRNHFL*ASIRNNSSSVK
Trigger: TTTAACAGATGAGGAGTTGTTTCTTATGGATGCGCAAAGAAAGTGGTTTCTTGAGATGGAATCTACACCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 72 bp TCTAAAATGGTGAATCCTTTCCAGAAGGTTTTCAATTaGCTTTGCCCAGATCCATCAGAGACATCACTATCC +
Preference number: 6 (lower is better)
Translates to: SKMVNPFQKVFN*LCPDPSETSLS
Trigger: GGATAGTGATGTCTCTGATGGATCTGGGCAAAGCAAATTGAAAACCTTCTGGAAAGGATTCACCATTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CAA 90 bp AAATGTATTTCTCAAATAATAAGACTTGAAGGTCGAAATTACCCCTaGATCCATGGGCTGCAGAATGGATGTTGTGTTAGCAGGCATGAA +
Preference number: 6 (lower is better)
Translates to: KCISQIIRLEGRNYP*IHGLQNGCCVSRHE
Trigger: TTCATGCCTGCTAACACAACATCCATTCTGCAGCCCATGGATCAAGGGGTAATTTCGACCTTCAAGTCTTATTATTTGAGAAATACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408957.7
CDS CCA 72 bp AAGGCTGTTTCGCTTTCTTATCATTCGTGTGTTCATTaGAGTAGCACTTTTAACTTCCTTCAAGAACTTTTC +
Preference number: 6 (lower is better)
Translates to: KAVSLSYHSCVH*SSTFNFLQELF
Trigger: GAAAAGTTCTTGAAGGAAGTTAAAAGTGCTACTCCAATGAACACACGAATGATAAGAAAGCGAAACAGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408957.7