RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIGAR (Homo sapiens)

Ensembl gene IDs: ENSG00000078237

Ensembl transcript IDs: ENST00000179259.6, ENST00000537251.1, ENST00000635110.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATTGGAGGCACTCTGGCCTGGTCCCTGCCAACATCCCTGGCCTTaGTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGC +
Preference number: 1 (lower is better)
Translates to: PLEALWPGPCQHPWP*FFKWPNSQCCHLPC
Trigger: GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTGGCAGGGACCAGGCCAGAGTGCCTCCAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 90 bp CTCTGGCCTGGTCCCTGCCAACATCCCTGGCCTTGCTTCTTCAAATaGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCTCCAACCTTGT +
Preference number: 1 (lower is better)
Translates to: LWPGPCQHPWPCFFK*PNSQCCHLPCLQPC
Trigger: ACAAGGTTGGAGGCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTGGCAGGGACCAGGCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp CCCCCTTGCTCAAAGGAGTCAAGCCTGATCCTTCCTCATGGCCTCTaGACTCTACTCCTTCCATGCTGCTCCTCTCCCCAGAGCAGCAGA +
Preference number: 1 (lower is better)
Translates to: PPCSKESSLILPHGL*TLLLPCCSSPQSSR
Trigger: TCTGCTGCTCTGGGGAGAGGAGCAGCATGGAAGGAGTAGAGTGCAGAGGCCATGAGGAAGGATCAGGCTTGACTCCTTTGAGCAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp CCATGGTTTCGACTCCAGGTGCAAGGGAGCCTAAGCGACAGGCTCTaGTTGAAGCTGCGAGCCTGGGGTGAAGCCTGGAACTGGAAACTT +
Preference number: 1 (lower is better)
Translates to: PWFRLQVQGSLSDRL*LKLRAWGEAWNWKL
Trigger: AAGTTTCCAGTTCCAGGCTTCACCCCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGCTTAGGCTCCCTTGCACCTGGAGTCGAAACCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp CAACATCCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTaGCATCTTCCCTGCCTCCAACCTTGTGCTCCTATAGCACCCCCT +
Preference number: 1 (lower is better)
Translates to: QHPWPCFFKWPNSQC*HLPCLQPCAPIAPP
Trigger: AGGGGGTGCTATAGGAGCACAAGGTTGGAGGCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp CTTCCCTGCCTCCAACCTTGTGCTCCTATAGCACCCCCTACAGCCTaGTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAAGTCTG +
Preference number: 1 (lower is better)
Translates to: LPCLQPCAPIAPPTA*SPHCKQDGPAETSL
Trigger: CAGACTTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTGCTATAGGAGCACAAGGTTGGAGGCAGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp CAGCAGATCTTACATCCTTCAGTGCTGACACCATCGAGTCCTCCCTaGCCATCCTGGATAAAGCAGCATTCCTCCCACCAGTCTCCATCC +
Preference number: 1 (lower is better)
Translates to: QQILHPSVLTPSSPP*PSWIKQHSSHQSPS
Trigger: GGATGGAGACTGGTGGGAGGAATGCTGCTTTATCCAGGATGGGCAGGGAGGACTCGATGGTGTCAGCACTGAAGGATGTAAGATCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp TCAAGCCTGATCCTTCCTCATGGCCTCTGCACTCTACTCCTTCCATaGTGCTCCTCTCCCCAGAGCAGCAGATCTTACATCCTTCAGTGC +
Preference number: 1 (lower is better)
Translates to: SSLILPHGLCTLLLP*CSSPQSSRSYILQC
Trigger: GCACTGAAGGATGTAAGATCTGCTGCTCTGGGGAGAGGAGCAGCATGGAAGGAGTAGAGTGCAGAGGCCATGAGGAAGGATCAGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 90 bp TTACATCCTTCAGTGCTGACACCATCGAGTCCTCCCTGCCCATCCTaGATAAAGCAGCATTCCTCCCACCAGTCTCCATCCCCCTTACTC +
Preference number: 1 (lower is better)
Translates to: LHPSVLTPSSPPCPS*IKQHSSHQSPSPLL
Trigger: GAGTAAGGGGGATGGAGACTGGTGGGAGGAATGCTGCTTTATCCAGGATGGGCAGGGAGGACTCGATGGTGTCAGCACTGAAGGATGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 90 bp CAACCTTGTGCTCCTATAGCACCCCCTACAGCCTGCTCTCCACATTaGAAGCAGGATGGTCCTGCTGAAACAAGTCTGATCACATCACTG +
Preference number: 1 (lower is better)
Translates to: QPCAPIAPPTACSPH*KQDGPAETSLITSL
Trigger: CAGTGATGTGATCAGACTTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTGCTATAGGAGCACAAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 90 bp CCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAAGTCTaGTCACATCACTGCCCAAACTGGCCAATGGCATCTCATCTCACT +
Preference number: 1 (lower is better)
Translates to: PALHIASRMVLLKQV*SHHCPNWPMASHLT
Trigger: AGTGAGATGAGATGCCATTGGCCAGTTTGGGCAGTGATGTGATCAGACTTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 90 bp TGGATAAAGCAGCATTCCTCCCACCAGTCTCCATCCCCCTTACTCTaGCCTATTTTGCTCAACAGCACTGACCACAATGTGAGCCAACAC +
Preference number: 1 (lower is better)
Translates to: WIKQHSSHQSPSPLL*PILLNSTDHNVSQH
Trigger: GTGTTGGCTCACATTGTGGTCAGTGCTGTTGAGCAAAATAGGTCAGAGTAAGGGGGATGGAGACTGGTGGGAGGAATGCTGCTTTATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 90 bp ACACCAAGAATGAACCCTAATGTAAACTATGGGTTTCAGGTGATGTaGATATGTCAGTGTAATGTGGGCTCACCGATGGTAACAGATGCA +
Preference number: 1 (lower is better)
Translates to: TPRMNPNVNYGFQVM*ICQCNVGSPMVTDA
Trigger: TGCATCTGTTACCATCGGTGAGCCCACATTACACTGACATATCCACATCACCTGAAACCCATAGTTTACATTAGGGTTCATTCTTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 90 bp TGTCATGACGACCTACTTAGCCATCTTGTTTGGACACAAAGGAACTaGCACATACTTCAATCTGAAAGCTGTACTTCCAAATTGATGGGG +
Preference number: 1 (lower is better)
Translates to: CHDDLLSHLVWTQRN*HILQSESCTSKLMG
Trigger: CCCCATCAATTTGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAAGATGGCTAAGTAGGTCGTCATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CAA 90 bp GCCATTGGAGGCACTCTGGCCTGGTCCCTGCCAACATCCCTGGCCTaGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: AIGGTLAWSLPTSLA*LLQMAQQPVLPSSL
Trigger: CAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTGGCAGGGACCAGGCCAGAGTGCCTCCAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CAA 90 bp TGGTTTCGACTCCAGGTGCAAGGGAGCCTAAGCGACAGGCTCTGCTaGAAGCTGCGAGCCTGGGGTGAAGCCTGGAACTGGAAACTTCTG +
Preference number: 2 (lower is better)
Translates to: WFRLQVQGSLSDRLC*KLRAWGEAWNWKLL
Trigger: CAGAAGTTTCCAGTTCCAGGCTTCACCCCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGCTTAGGCTCCCTTGCACCTGGAGTCGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAACCTGATCCTTCCTCATaGCCTCTGCACTCTACTCCT +
Preference number: 2 (lower is better)
Translates to: HPLQPALHIASRMVLLKQPDPSS*PLHSTP
Trigger: AGGAGTAGAGTGCAGAGGCCATGAGGAAGGATCAGG...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAAGGGTTTCACCATTGTTaGCCAGGCTGGTCTAGAATT +
Preference number: 2 (lower is better)
Translates to: HPLQPALHIASRMVLLKQGFHHC*PGWSRI
Trigger: AATTCTAGACCAGCCTGGCCAACAATGGTGAAACCC...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCTGGTTTCCATTGACTTaGCTTTGGCAAGGCATTATT +
Preference number: 2 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCWFPLT*LWQGII
Trigger: AATAATGCCTTGCCAAAGTCAAGTCAATGGAAACCA...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTGCGACAGGCTCTGCTTaGAGCTGCGAGCCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTATGSA*SCEPGV
Trigger: CACCCCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGC...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGCAAATGAGGGGGTGTaGGGCCTGAGAGCACACACC +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSANEGV*GLRAHT
Trigger: GGTGTGTGCTCTCAGGCCTCACACCCCCTCATTTGC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTTCACCTAGGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSSPRLE*SGAISA
Trigger: AGCCGAGATCGCACCACTTCACTCCAGCCTAGGTGA...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTCCCAACAGCCAGTGCTaGCATCTTCCCTGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSPNSQC*HLPCLQ
Trigger: TTGGAGGCAGGGAAGATGGCAGCACTGGCTGTTGGG...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTTTGAAGCTGCGAGCCTaGGGTGAAGCCTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSLKLRA*GEAWNW
Trigger: CCAGTTCCAGGCTTCACCCCAGGCTCGCAGCTTCAA...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAACATTTAGCAACATGGTaGCTTAAAAGCGAACTACAT +
Preference number: 2 (lower is better)
Translates to: HPLQPALHIASRMVLLKQHLATW*LKSELH
Trigger: ATGTAGTTCGCTTTTAAGTCACCATGTTGCTAAATG...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTAGGTGGAGGTTGCAGTaGGCCAAGATCACGCCATTG +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSRWRLQ*AKITPL
Trigger: CAATGGCGTGATCTTGGCTCACTGCAACCTCCACCT...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTCCGAGAGGTGGAGGTTaGAGTGAGCCAAGATCACGC +
Preference number: 2 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTPRGGG*SEPRSR
Trigger: GCGTGATCTTGGCTCACTGCAACCTCCACCTCTCGG...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTCTCTCCCATCCCCCTTaGTCAAAGGAGTCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSLSHPP*SKESSL
Trigger: CAGGCTTGACTCCTTTGAGCAAGGGGGATGGGAGAG...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATGGCCCAACAGCCAGTaGTGCCATCTTCCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPWPNSQ*CHLPCL
Trigger: GAGGCAGGGAAGATGGCAGCACTGGCTGTTGGGCCA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAACCTCCCAAGTAGCTaGGATTACAGGCGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRNLPSS*DYRRLL
Trigger: TAGCAGGCGCCTGTAATCCCAGCTACTTGGGAGGTT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAACTCACTGCAGTGGCTaGCTCTGGAGGGAACAGGAC +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPTHCSG*LWREQD
Trigger: GTCCTGTTCCCTCCAGAGGCAGCCACTGCAGTGAGT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCACTACTCCTTCCATGCTaGTCCTCTCCCCAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPLLLPC*SSPQSS
Trigger: GCTGCTCTGGGGAGAGGAGCAGCATGGAAGGAGTAG...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGCACCCCCTACAGCCTaGTCTCCACATTGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPAPPTA*SPHCKQ
Trigger: CTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTGC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTCCTCCCTGCCCATCCTaGATAAAGCAGCATTCCTCC +
Preference number: 2 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTPPCPS*IKQHSS
Trigger: GGAGGAATGCTGCTTTATCCAGGATGGGCAGGGAGG...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAACTCTACTCCTTCCATaGTGCTCCTCTCCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPTLLLP*CSSPQS
Trigger: GCTCTGGGGAGAGGAGCAGCATGGAAGGAGTAGAGT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTCAACATCCCTGGCCTTaGTTCTTCAAATGGCCCAAC +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSQHPWP*FFKWPN
Trigger: GTTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTG...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGGAGGGAACAGGACTGTaGGAGCTGGTTAAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMEGTGL*ELVKEN
Trigger: GTTCTCTTTAACCAGCTCTCACAGTCCTGTTCCCTC...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAGGCAGGTGGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGGRWIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCCACCTGCC...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGGAACTGGAAACTTCTaGCCATTCCCTCTGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPGTGNF*PFPLLG
Trigger: GCCTAGCAGAGGGAATGGGCAGAAGTTTCCAGTTCC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGAGCCTTCCTCAAACTaGAAATTCTTCAGCCTACAG +
Preference number: 2 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLREPSSN*KFFSLQ
Trigger: CTGTAGGCTGAAGAATTTCCAGTTTGAGGAAGGCTC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
3UTR-3UTR CCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGTGCAGTGGCTGCCTCTaGAGGGAACAGGACTGTGAG +
Preference number: 2 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVCSGCL*REQDCE
Trigger: CTCACAGTCCTGTTCCCTCCAGAGGCAGCCACTGCA...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAACAGACTCACTGCAGTaGCTGCCTCTGGAGGGAACA +
Preference number: 2 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGTDSLQ*LPLEGT
Trigger: TGTTCCCTCCAGAGGCAGCCACTGCAGTGAGTCTGT...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTGCACCACCGCTCTACTaGATACTTCTTTCCTTTGCA +
Preference number: 2 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTAPPLY*ILLSFA
Trigger: TGCAAAGGAAAGAAGTATTCAGTAGAGCGGTGGTGC...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGACTTCCTCATGGCCTCTaGACTCTACTCCTTCCATGC +
Preference number: 2 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGLPHGL*TLLLPC
Trigger: GCATGGAAGGAGTAGAGTGCAGAGGCCATGAGGAAG...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTCATTGTTGGCCAGGCTaGTCTAGAATTCCTGACCTT +
Preference number: 2 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTHCWPG*SRIPDL
Trigger: AAGGTCAGGAATTCTAGACCAGCCTGGCCAACAATG...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGATGCACTGGTCTGGTaGGGGATGTTGATAGTAGGA +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPDALVW*GMLIVG
Trigger: TCCTACTATCAACATCCCCCACCAGACCAGTGCATC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATGGTTTCCATTGACTTaGCTTTGGCAAGGCATTATT +
Preference number: 2 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRWFPLT*LWQGII
Trigger: AATAATGCCTTGCCAAAGTCAAGTCAATGGAAACCA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
3UTR-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACATTTAGCAACATGGTaGCTTAAAAGCGAACTACAT +
Preference number: 2 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRHLATW*LKSELH
Trigger: ATGTAGTTCGCTTTTAAGTCACCATGTTGCTAAATG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
3UTR-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTAACATTGCAAGCAGATaGACAGGTGAACATATACAC +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSNIASR*TGEHIH
Trigger: GTGTATATGTTCACCTGTTCATCTGCTTGCAATGTT...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTTCCCCCAGACCATTCTaGAATCATAATCTGTATTCA +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSSPRPF*NHNLYS
Trigger: TGAATACAGATTATGATTGCAGAATGGTCTGGGGGA...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGCTGAGGCACAAGAATTaGTTGAACCCGAGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVLRHKN*LNPRGG
Trigger: TCCACCTCTCGGGTTCAAGCAATTCTTGTGCCTCAG...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACACTTCCAGACACTAGGTaGAAATATAAGGAACAGATG +
Preference number: 2 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTLPDTR*KYKEQM
Trigger: CATCTGTTCCTTATATTTTCACCTAGTGTCTGGAAG...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTAAAATGAGAGATCTATaGCATTCACAGATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTKMRDL*HSQMGG
Trigger: TCCTCCCATCTGTGAATGTCATAGATCTCTCATTTT...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGGACATGAAGAAACATaGCAACTAAATGCAACACAA +
Preference number: 2 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSGHEET*QLNATQ
Trigger: TTGTGTTGCATTTAGTTGTCATGTTTCTTCATGTCC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATTCAGAGGCTCAAAATaGTTAGATTTTGATGCAGAT +
Preference number: 2 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRFRGSK*LDFDAD
Trigger: ATCTGCATCAAAATCTAACCATTTTGAGCCTCTGAA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATTTAAGACAGTCAGCTaGAAAGCCACAGTAACTAAG +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPFKTVS*KATVTK
Trigger: CTTAGTTACTGTGGCTTTGCAGCTGACTGTCTTAAA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGAACAGCCTTTACAATaGTGTTGGGATAACTGTTTC +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPEQPLQ*CWDNCF
Trigger: GAAACAGTTATCCCAACACCATTGTAAAGGCTGTTC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR TCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAGTAGACGGAAGGACATaGAGAAACATGACAACTAAA +
Preference number: 2 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGVDGRT*RNMTTK
Trigger: TTTAGTTGTCATGTTTCTTCATGTCCTTCCGTCTAC...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCACCTTCCTCTCACTTTTaGTGGGAAATTAAAGTTTCT +
Preference number: 2 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPPSSHF*WEIKVS
Trigger: AGAAACTTTAATTTCCCAGCAAAAGTGAGAGGAAGG...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp AAGCGACAGGCTCTGCTTGAAGCTGCGAGCCTGGGGTaGAGCCTGGAACTGGAAACTTCTGCCCATTCCCTC +
Preference number: 3 (lower is better)
Translates to: KRQALLEAASLG*SLELETSAHSL
Trigger: GAGGGAATGGGCAGAAGTTTCCAGTTCCAGGCTTCACCCCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp TGCGAGCCTGGGGTGAAGCCTGGAACTGGAAACTTCTaGCCATTCCCTCTGCTAGGCCTCGGACTAAACCTA +
Preference number: 3 (lower is better)
Translates to: CEPGVKPGTGNF*PFPLLGLGLNL
Trigger: TAGGTTTAGTCCGAGGCCTAGCAGAGGGAATGGGCAGAAGTTTCCAGTTCCAGGCTTCACCCCAGGCTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp CACTCTCCCATCCCCCTTGCTCAAAGGAGTCAAGCCTaGTCCTTCCTCATGGCCTCTGCACTCTACTCCTTC +
Preference number: 3 (lower is better)
Translates to: HSPIPLAQRSQA*SFLMASALYSF
Trigger: GAAGGAGTAGAGTGCAGAGGCCATGAGGAAGGATCAGGCTTGACTCCTTTGAGCAAGGGGGATGGGAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp CACTGCCCAAACTGGCCAATGGCATCTCATCTCACTTaGGTAAAAGCCCAAGGCCTCAGCACAGGCCACCAG +
Preference number: 3 (lower is better)
Translates to: HCPNWPMASHLT*VKAQGLSTGHQ
Trigger: CTGGTGGCCTGTGCTGAGGCCTTGGGCTTTTACTCAAGTGAGATGAGATGCCATTGGCCAGTTTGGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp CTCCAACCTTGTGCTCCTATAGCACCCCCTACAGCCTaGTCTCCACATTGCAAGCAGGATGGTCCTGCTGAA +
Preference number: 3 (lower is better)
Translates to: LQPCAPIAPPTA*SPHCKQDGPAE
Trigger: TTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTGCTATAGGAGCACAAGGTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 72 bp CCCTTGCTCAAAGGAGTCAAGCCTGATCCTTCCTCATaGCCTCTGCACTCTACTCCTTCCATGCTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: PLLKGVKPDPSS*PLHSTPSMLLL
Trigger: GAGGAGCAGCATGGAAGGAGTAGAGTGCAGAGGCCATGAGGAAGGATCAGGCTTGACTCCTTTGAGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp TTACATCCTTCAGTGCTGACACCATCGAGTCCTCCCTaGCCATCCTGGATAAAGCAGCATTCCTCCCACCAG +
Preference number: 3 (lower is better)
Translates to: LHPSVLTPSSPP*PSWIKQHSSHQ
Trigger: CTGGTGGGAGGAATGCTGCTTTATCCAGGATGGGCAGGGAGGACTCGATGGTGTCAGCACTGAAGGATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp GCTCCTATAGCACCCCCTACAGCCTGCTCTCCACATTaGAAGCAGGATGGTCCTGCTGAAACAAGTCTGATC +
Preference number: 3 (lower is better)
Translates to: APIAPPTACSPH*KQDGPAETSLI
Trigger: GATCAGACTTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTGCTATAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp TGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTaGCATCTTCCCTGCCTCCAACCTTGTGCTCCTATA +
Preference number: 3 (lower is better)
Translates to: WPCFFKWPNSQC*HLPCLQPCAPI
Trigger: TATAGGAGCACAAGGTTGGAGGCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp CACATTGCAAGCAGGATGGTCCTGCTGAAACAAGTCTaGTCACATCACTGCCCAAACTGGCCAATGGCATCT +
Preference number: 3 (lower is better)
Translates to: HIASRMVLLKQV*SHHCPNWPMAS
Trigger: AGATGCCATTGGCCAGTTTGGGCAGTGATGTGATCAGACTTGTTTCAGCAGGACCATCCTGCTTGCAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp GGAACCAGACATATTGATACAACGTCCTGTCCCTCCTaGCATGACCAAGGACACATCCTTTCTGGGCTGCTT +
Preference number: 3 (lower is better)
Translates to: GTRHIDTTSCPS*HDQGHILSGLL
Trigger: AAGCAGCCCAGAAAGGATGTGTCCTTGGTCATGTCAGGAGGGACAGGACGTTGTATCAATATGTCTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 72 bp GCACTATTAGCAATGAGCACCCTGGCACCGAGATCTTaGTTTCTAAATACCATGCACACCAGGCGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: ALLAMSTLAPRS*FLNTMHTRRLS
Trigger: TGAAAGACGCCTGGTGTGCATGGTATTTAGAAACCAAGATCTCGGTGCCAGGGTGCTCATTGCTAATAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CAA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGATGCAGTGGCGCGACCTaGGCTCACTGCAAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGCSGAT*AHCKLH
Trigger: GTGGAGCTTGCAGTGAGCCAAGGTCGCGCCACTGCA...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CAA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAAGCCTGCTCTCCACATaGCAAGCAGGATGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPSLLST*QAGWSC
Trigger: GCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp TCTGACCTATTTTGCTCAACAGCACTGACCACAATGTaGGCCAACACACTGTCTTCTCTGACAGAACAAATG +
Preference number: 3 (lower is better)
Translates to: SDLFCSTALTTM*ANTLSSLTEQM
Trigger: CATTTGTTCTGTCAGAGAAGACAGTGTGTTGGCTCACATTGTGGTCAGTGCTGTTGAGCAAAATAGGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp AACAAGAGGAGGTATCCACCCTTTAAGACAGTCAGCTaGAAAGCCACAGTAACTAAGTATGACACTGATAAG +
Preference number: 3 (lower is better)
Translates to: NKRRYPPFKTVS*KATVTKYDTDK
Trigger: CTTATCAGTGTCATACTTAGTTACTGTGGCTTTGCAGCTGACTGTCTTAAAGGGTGGATACCTCCTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 72 bp ATGAACCCTAATGTAAACTATGGGTTTCAGGTGATGTaGATATGTCAGTGTAATGTGGGCTCACCGATGGTA +
Preference number: 3 (lower is better)
Translates to: MNPNVNYGFQVM*ICQCNVGSPMV
Trigger: TACCATCGGTGAGCCCACATTACACTGACATATCCACATCACCTGAAACCCATAGTTTACATTAGGGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CAA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTCTGGTTTCCATTGACTaGACTTTGGCAAGGCATTAT +
Preference number: 3 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTLVSID*TLARHY
Trigger: ATAATGCCTTGCCAAAGTCAAGTCAATGGAAACCAG...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR GCA 72 bp TATAAGCATATGTACTTAAGTGATATGGCCAAATATTaGACTTCCTGCATAAGCCTAAGCCATGGAATGGGT +
Preference number: 3 (lower is better)
Translates to: YKHMYLSDMAKY*TSCISLSHGMG
Trigger: ACCCATTCCATGGCTTAGGCTTATGCAGGAAGTGCAATATTTGGCCATATCACTTAAGTACATATGCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR-3UTR CAA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATCCATTGACTTGACTTaGGCAAGGCATTATTTAGAA +
Preference number: 3 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPSIDLT*ARHYLE
Trigger: TTCTAAATAATGCCTTGCCAAAGTCAAGTCAATGGA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CCA 72 bp AGCTCCAAACTAGAAATGGTCCTTGTGTTCCGTCAATaGAAGAATAAACAAACTGTTGTGTATCTATGCATT +
Preference number: 3 (lower is better)
Translates to: SSKLEMVLVFRQ*KNKQTVVYLCI
Trigger: AATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAGGACCATTTCTAGTTTGGAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR TCA 72 bp AGCAATTCCACTCCCAGATTATTTACCCAAGAGAAATaGAAACATACGTCCGCAAAAAGACTTGTAAAAATA +
Preference number: 3 (lower is better)
Translates to: SNSTPRLFTQEK*KHTSAKRLVKI
Trigger: TATTTTTACAAGTCTTTTTGCGGACGTATGTTTTCATTTCTCTTGGGTAAATAATCTGGGAGTGGAATTGCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCAGGGGGTGTGAGGCCTaGGAGCACACACCACAAACC +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCRGCEA*EHTPQT
Trigger: GGTTTGTGGTGTGTGCTCTCAGGCCTCACACCCCCT...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCCCAACAGCCAGTGCTaGCATCTTCCCTGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCPNSQC*HLPCLQ
Trigger: TTGGAGGCAGGGAAGATGGCAGCACTGGCTGTTGGG...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCGGCAGGTGGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCGRWIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCCACCTGCC...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACCAGAGCGGCGGCGGTaGGCGCAGCAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRPERRR*AQQKGQ
Trigger: CTGGCCCTTCTGCTGCGCTCACCGCCGCCGCTCTGG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAACCACGCATTTTCACCTaGTCCAGCGTCTCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQPRIFT*SSVSPP
Trigger: CGGAGGAGAGACGCTGGACCAGGTGAAAATGCGTGG...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCAACCTCCCAAGTAGCTaGGATTACAGGCGCCTGCTA +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCNLPSS*DYRRLL
Trigger: TAGCAGGCGCCTGTAATCCCAGCTACTTGGGAGGTT...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAATGCTGCCATCTTCCCTaGCTCCAACCTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQCCHLP*LQPCAP
Trigger: AGGAGCACAAGGTTGGAGGCAGGGAAGATGGCAGCA...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCAACATCCCTGGCCTTaGTTCTTCAAATGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCQHPWP*FFKWPN
Trigger: GTTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTG...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGCTGCCCTGGGGAGATaGCGGAGGCGGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLAALGR*RRRGCC
Trigger: GCAGCACCCCCGCCTCCGCCATCTCCCCAGGGCAGC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATTCCCCAGGCTGCCCTaGGGAGATGGCGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRFPRLP*GDGGGG
Trigger: CCCGCCTCCGCCATCTCCCCAGGGCAGCCTGGGGAA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACGGAGGCGGGGGTGCTaGTCCAGTGCTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRRRRGC*SSAVCW
Trigger: CCAGCAGACAGCACTGGAGCAGCACCCCCGCCTCCG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATGGACGGGAAAGGCCTaGCGTTCCTTCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRWTGKA*RSFPRL
Trigger: CAGCCTGGGGAAGGAACGTCAGGCCTTTCCCGTCCA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCATTCCATGCATGGTCTaGTTTGTCCTCATGAGATCA +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCIPCMV*FVLMRS
Trigger: TGATCTCATGAGGACAAAGCAGACCATGCATGGAAT...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCCTTCATCATCCATGTaGAATCCAGAGATGACATCT +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCPSSSM*NPEMTS
Trigger: AGATGTCATCTCTGGATTGCACATGGATGATGAAGG...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACTCTGGCCTGGTCCCTaGCAACATCCCTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRLWPGP*QHPWPC
Trigger: GCAAGGCCAGGGATGTTGGCAGGGACCAGGCCAGAG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACAGGGGCGCTGGTCTTaGTTTCTCAGGCCGCCCAGT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRQGRWS*FLRPPS
Trigger: ACTGGGCGGCCTGAGAAAGCAAGACCAGCGCCCCTG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGGGGTGCTGCTCCAGTaGTGTCTGCTGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRGVLLQ*CLLEGG
Trigger: ACCTCCCTCCAGCAGACAGCACTGGAGCAGCACCCC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACAGGGCACTCTTCCCTaGCTGCTTTGGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRQGTLP*LLWPWP
Trigger: GGGCCATGGCCAAAGCAGCCAGGGAAGAGTGCCCTG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCAGGACTGTGAGAGCTaGTTAAAGAGAACTCTACTT +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCQDCES*LKRTLL
Trigger: AAGTAGAGTTCTCTTTAACCAGCTCTCACAGTCCTG...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCATGGTACAACCACCATaGAAAAAGATCTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCMVQPP*KKIWQV
Trigger: CACTTGCCAGATCTTTTTCCATGGTGGTTGTACCAT...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAGCGACAGGCTCTGCTTaGAGCTGCGAGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTATGSA*SCEPGV
Trigger: CACCCCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGC...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGCTTCAGGGGGACAATaGGACAGAGGCAGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLASGGQ*DRGRGA
Trigger: AGCGCCCCTGCCTCTGTCTCATTGTCCCCCTGAAGC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGGCCACCAGGCCATGTaGCCTGTCCTCTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSGHQAM*PVLFSR
Trigger: ACGGGAGAAGAGGACAGGCCACATGGCCTGGTGGCC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACAGAGGCAGGGGCGCTaGTCTTGCTTTCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLQRQGR*SCFLRP
Trigger: CGGCCTGAGAAAGCAAGACCAGCGCCCCTGCCTCTG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCTTTAAATCCAGTTTCTaGAAGAGGTTCATCTACTCC +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCFKSSF*KRFIYS
Trigger: GGAGTAGATGAACCTCTTTCAGAAACTGGATTTAAA...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCACCTAGGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSPRLE*SGAISA
Trigger: AGCCGAGATCGCACCACTTCACTCCAGCCTAGGTGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGCTGCGAGCCTGGGGTaGAGCCTGGAACTGGAAACT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLAASLG*SLELET
Trigger: AGTTTCCAGTTCCAGGCTTCACCCCAGGCTCGCAGC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCTCAGGAAACACACATTaGAATTTTATAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCSGNTH*NFIGEE
Trigger: CTCTTCCCCTATAAAATTTCAATGTGTGTTTCCTGA...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGCACTCTTCCCTGGCTaGTTTGGCCATGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLALFPG*FGHGPQ
Trigger: CTGAGGGCCATGGCCAAAGCAGCCAGGGAAGAGTGC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTTGGCCCAACAGCCAGTaGTGCCATCTTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSWPNSQ*CHLPCL
Trigger: GAGGCAGGGAAGATGGCAGCACTGGCTGTTGGGCCA...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATGCTCCAGTGCTGTCTaGTGGAGGGAGGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRCSSAV*WREVFP
Trigger: AGGGAACACCTCCCTCCAGCAGACAGCACTGGAGCA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACACAGGGCACTCTTCCCTaGCTGCTTTGGCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTQGTLP*LLWPWP
Trigger: GGGCCATGGCCAAAGCAGCCAGGGAAGAGTGCCCTG...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGCAGGCTGCAGTGCAGTaGCGCGACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMQAAVQ*RDLGSL
Trigger: CAGTGAGCCAAGGTCGCGCCACTGCACTGCAGCCTG...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCCAGTGCTGTCTGCTaGAGGGAGGTGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSSAVC*REVFPS
Trigger: GGAAGGGAACACCTCCCTCCAGCAGACAGCACTGGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACCACTTGGGACTTACTaGGCCCTCCTTCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLPLGTY*ALLPGQ
Trigger: CTGGCCAGGAAGGAGGGCCCAGTAAGTCCCAAGTGG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
3UTR CAA 72 bp GGCACTATTAGCAATGAGCACCCTGGCACCGAGATCTaGGTTTCTAAATACCATGCACACCAGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTISNEHPGTEI*VSKYHAHQASF
Trigger: GAAAGACGCCTGGTGTGCATGGTATTTAGAAACCAAGATCTCGGTGCCAGGGTGCTCATTGCTAATAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTTATCTCCTGACCTCGTaGTCTGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTYLLTS*SARLGL
Trigger: GAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATA...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAAGTGAGAGAAGCAGGTaGGGGAACTGCGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLSERSR*GNCARC
Trigger: ACACCTGGCGCAGTTCCCTCACCTGCTTCTCTCACT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAACTCACTGCAGTGGCTaGCTCTGGAGGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLTHCSG*LWREQD
Trigger: GTCCTGTTCCCTCCAGAGGCAGCCACTGCAGTGAGT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTTGGCTGCTTTGGCCATaGCCCTCAGCTCACTTAGCG +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSWLLWP*PSAHLA
Trigger: CGCTAAGTGAGCTGAGGGCCATGGCCAAAGCAGCCA...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATGGCTGCTTTGGCCATaGCCCTCAGCTCACTTAGCG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLWLLWP*PSAHLA
Trigger: CGCTAAGTGAGCTGAGGGCCATGGCCAAAGCAGCCA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTTGCAGTGGCTGCCTCTaGAGGGAACAGGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSCSGCL*REQDCE
Trigger: CTCACAGTCCTGTTCCCTCCAGAGGCAGCCACTGCA...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATGCAGTGGCTGCCTCTaGAGGGAACAGGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLCSGCL*REQDCE
Trigger: CTCACAGTCCTGTTCCCTCCAGAGGCAGCCACTGCA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAACAGACTCACTGCAGTaGCTGCCTCTGGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRTDSLQ*LPLEGT
Trigger: TGTTCCCTCCAGAGGCAGCCACTGCAGTGAGTCTGT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAAGAACAGCCTTTACAATaGTGTTGGGATAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQEQPLQ*CWDNCF
Trigger: GAAACAGTTATCCCAACACCATTGTAAAGGCTGTTC...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGGAGGCACTCTGGCCTaGTCCCTGCCAACATCCCTG +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPGGTLA*SLPTSL
Trigger: CAGGGATGTTGGCAGGGACCAGGCCAGAGTGCCTCC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAAAAGACAAAGTTCATCTaGTTAGATAGATGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQKTKFI*LDRWWE
Trigger: CTCCCACCATCTATCTAACCAGATGAACTTTGTCTT...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAACCAGCCACCCCAGATaGAGTCACGATGTGGCGGTA +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLTSHPR*SHDVAV
Trigger: TACCGCCACATCGTGACTCCATCTGGGGTGGCTGGT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACAGTCGGTTGTGGGGTaGGCAGAGGGTAGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLQSVVG*AEGRER
Trigger: CCTTTCTCTACCCTCTGCCCACCCCACAACCGACTG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGAGGATGACTCCACTTaGGACTTACTGGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLREDDST*DLLGPP
Trigger: AGGAGGGCCCAGTAAGTCCCAAGTGGAGTCATCCTC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGCAAATGAGGGGGTGTaGGGCCTGAGAGCACACACC +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPANEGV*GLRAHT
Trigger: GGTGTGTGCTCTCAGGCCTCACACCCCCTCATTTGC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGCTAAGCGACAGGCTCTaGTTGAAGCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMLSDRL*LKLRAW
Trigger: CCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGCTTAG...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAAAACATGACAACTAAATaGAACACAACACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQNMTTK*NTTHSP
Trigger: AGGACTGTGTGTTGTGTTGCATTTAGTTGTCATGTT...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATTGAAGCTGCGAGCCTaGGGTGAAGCCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTLKLRA*GEAWNW
Trigger: CCAGTTCCAGGCTTCACCCCAGGCTCGCAGCTTCAA...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATGTGGTGGAGAGGGTTaGAGGAGGATGACTCCACTT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRCGGEG*RRMTPL
Trigger: AAGTGGAGTCATCCTCCTCCAACCCTCTCCACCACA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATCACCTAGGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPSPRLE*SGAISA
Trigger: AGCCGAGATCGCACCACTTCACTCCAGCCTAGGTGA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAAGGGTTGGAGGAGGATaGCTCCACTTGGGACTTACT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLRVGGG*LHLGLT
Trigger: AGTAAGTCCCAAGTGGAGTCATCCTCCTCCAACCCT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACGGTCTTTCTTCGTCTaGGAAGGAGAGGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRRSFFV*EGEVMV
Trigger: GACCATAACCTCTCCTTCTCAGACGAAGAAAGACCG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAGACACAGGTTAGGCTaGAGAGCTGTAAGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRRHRLG*RAVSPK
Trigger: CTTAGGGCTTACAGCTCTGCAGCCTAACCTGTGTCT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAATTCAGAGGCTCAAAATaGTTAGATTTTGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQFRGSK*LDFDAD
Trigger: ATCTGCATCAAAATCTAACCATTTTGAGCCTCTGAA...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTACAGACTCACTGCAGTaGCTGCCTCTGGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTTDSLQ*LPLEGT
Trigger: TGTTCCCTCCAGAGGCAGCCACTGCAGTGAGTCTGT...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGCCCAAACTGGCCAATaGCATCTCATCTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRAQTGQ*HLISLE
Trigger: CTCAAGTGAGATGAGATGCCATTGGCCAGTTTGGGC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACCCCCTACAGCCTGCTCTCCACATTGCAAGCAGGATGGTCCTGCTGAAACAACAGTCCTGGATTGATTaGATTCTTGATTCAGAAAAA +
Preference number: 4 (lower is better)
Translates to: HPLQPALHIASRMVLLKQQSWID*ILDSEK
Trigger: TTTTTCTGAATCAAGAATCCAATCAATCCAGGACTG...TTGTTTCAGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAACAGTATACTTCCTCTaGTGCTCAAACACGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRTVYFL*CSNTCP
Trigger: AGGGCACGTGTTTGAGCATCAGAGGAAGTATACTGT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGAGGGAACAGGACTGTaGGAGCTGGTTAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLEGTGL*ELVKEN
Trigger: GTTCTCTTTAACCAGCTCTCACAGTCCTGTTCCCTC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGCTGTCCCTCCTGACATaGCCAAGGACACATCCTTTC +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMLSLLT*PRTHPF
Trigger: GAAAGGATGTGTCCTTGGTCATGTCAGGAGGGACAG...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAACGTCCTGTCCCTCCTaGCATGACCAAGGACACATC +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPTSCPS*HDQGHI
Trigger: GATGTGTCCTTGGTCATGTCAGGAGGGACAGGACGT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGGCACTCTTCCCTGGCTaGTTTGGCCATGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVALFPG*FGHGPQ
Trigger: CTGAGGGCCATGGCCAAAGCAGCCAGGGAAGAGTGC...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGCCTGCTCTCCACATTaGAAGCAGGATGGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPACSPH*KQDGPA
Trigger: AGCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAGCACCCCCTACAGCCTaGTCTCCACATTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGAPPTA*SPHCKQ
Trigger: CTGCTTGCAATGTGGAGAGCAGGCTGTAGGGGGTGC...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAGGAACTGGAAACTTCTaGCCATTCCCTCTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTGTGNF*PFPLLG
Trigger: GCCTAGCAGAGGGAATGGGCAGAAGTTTCCAGTTCC...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACTTCGCAGGAAGAACTaGATGTTGAAACCATGCGGA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRLRRKN*MLKPCG
Trigger: TCCGCATGGTTTCAACATGCAGTTCTTCCTGCGAAG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAATTTGGTCTGTAAGCTaGCAGTGTGCCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRIWSVS*QCAISG
Trigger: TCCAGAGATGGCACACTGGCAGCTTACAGACCAAAT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACATTGTTGGCCAGGCTaGTCTAGAATTCCTGACCTT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRHCWPG*SRIPDL
Trigger: AAGGTCAGGAATTCTAGACCAGCCTGGCCAACAATG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGGGTTTCACCATTGTTaGCCAGGCTGGTCTAGAATT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRGFHHC*PGWSRI
Trigger: AATTCTAGACCAGCCTGGCCAACAATGGTGAAACCC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTCCTGATCCTTCCTCATaGCCTCTGCACTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTPDPSS*PLHSTP
Trigger: AGGAGTAGAGTGCAGAGGCCATGAGGAAGGATCAGG...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGGGTGAAGCCTGGAACTaGAAACTTCTGCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMGEAWN*KLLPIP
Trigger: GGGAATGGGCAGAAGTTTCCAGTTCCAGGCTTCACC...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAGCCTGGGGTGAAGCCTaGAACTGGAAACTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGAWGEA*NWKLLP
Trigger: GGGCAGAAGTTTCCAGTTCCAGGCTTCACCCCAGGC...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATCTGCAGGCTGGATTTaGTCTGTAAGCTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLSAGWI*SVSCQC
Trigger: ACACTGGCAGCTTACAGACCAAATCCAGCCTGCAGA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCTGCTTTGTCCTCATaGGATCACTGGAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSALSS*DHWRKH
Trigger: ATGCTTTCTCCAGTGATCTCATGAGGACAAAGCAGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGCTGTACTTCCAAATTaGTGGGGCCCAAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSAVLPN*WGPKKE
Trigger: CTCTTTCTTTGGGCCCCATCAATTTGGAAGTACAGC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGGAAGAACTGCATGTTaGAACCATGCGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLGRTAC*NHADSH
Trigger: ATGACTGTCCGCATGGTTTCAACATGCAGTTCTTCC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACTCTGGATTAGTCACTaGAGAGTCAGGGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLLWISH*RVREGD
Trigger: ATCACCTTCCCTGACTCTTCAGTGACTAATCCAGAG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACACTGAGGCACAAGAATTaGTTGAACCCGAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTLRHKN*LNPRGG
Trigger: TCCACCTCTCGGGTTCAAGCAATTCTTGTGCCTCAG...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGCTACTCCTTCCATGCTaGTCCTCTCCCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVLLLPC*SSPQSS
Trigger: GCTGCTCTGGGGAGAGGAGCAGCATGGAAGGAGTAG...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGACTCTCCCATCCCCCTTaGTCAAAGGAGTCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGLSHPP*SKESSL
Trigger: CAGGCTTGACTCCTTTGAGCAAGGGGGATGGGAGAG...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATTCCAGACAGTTGCTTaGAGATCCTTGGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRFQTVA*RSLGKL
Trigger: CAGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGACCTCCCTGCCCATCCTaGATAAAGCAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGPPCPS*IKQHSS
Trigger: GGAGGAATGCTGCTTTATCCAGGATGGGCAGGGAGG...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGGATGCACTGGTCTGGTaGGGGATGTTGATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMDALVW*GMLIVG
Trigger: TCCTACTATCAACATCCCCCACCAGACCAGTGCATC...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATGGAATACCGCTGTCTaGATTAACTTTAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRWNTAV*INFRAV
Trigger: CACAGCTCTAAAGTTAATTCAGACAGCGGTATTCCA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGCATCTCATCTCACTTaGGTAAAAGCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPASHLT*VKAQGL
Trigger: GAGGCCTTGGGCTTTTACTCAAGTGAGATGAGATGC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAACAAGGTGGGAAAGATaGGTACAGGGAACACAGAGG +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPTRWER*VQGTQR
Trigger: CCTCTGTGTTCCCTGTACTCATCTTTCCCACCTTGT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAGCACCACCGCTCTACTaGATACTTCTTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTAPPLY*ILLSFA
Trigger: TGCAAAGGAAAGAAGTATTCAGTAGAGCGGTGGTGC...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTCTCTCCAAAATTCCATaGATGGTCTGCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSLSKIP*MVCFVL
Trigger: GAGGACAAAGCAGACCATGCATGGAATTTTGGAGAG...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACTCTCCAAAATTCCATaGATGGTCTGCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLLSKIP*MVCFVL
Trigger: GAGGACAAAGCAGACCATGCATGGAATTTTGGAGAG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACCTTCATCATCCATGTaGAATCCAGAGATGACATCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRPSSSM*NPEMTS
Trigger: AGATGTCATCTCTGGATTGCACATGGATGATGAAGG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATGCATGTTGAAACCATaGGGACAGTCATTTACCAGA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRCMLKP*GQSFTR
Trigger: TCTGGTAAATGACTGTCCGCATGGTTTCAACATGCA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACAGGACTGTGAGAGCTaGTTAAAGAGAACTCTACTT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRQDCES*LKRTLL
Trigger: AAGTAGAGTTCTCTTTAACCAGCTCTCACAGTCCTG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAATTATGTCTGCAGGCTaGATTTGGTCTGTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLIMSAG*IWSVSC
Trigger: GCAGCTTACAGACCAAATCCAGCCTGCAGACATAAT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATCTGCTTTGTCCTCATaGGATCACTGGAGAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTSALSS*DHWRKH
Trigger: ATGCTTTCTCCAGTGATCTCATGAGGACAAAGCAGA...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATGTATTGGGAGTGACTaGCATAAGTTCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLCIGSD*HKFRSA
Trigger: AGCAGATCTGAACTTATGTCAGTCACTCCCAATACA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGTCAGTCCATTTAGATaGTCCTGTAGGTTCATACAA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRVSPFR*SCRFIQ
Trigger: TTGTATGAACCTACAGGATCATCTAAATGGACTGAC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAACATTGCAAGCAGATaGACAGGTGAACATATACAC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRNIASR*TGEHIH
Trigger: GTGTATATGTTCACCTGTTCATCTGCTTGCAATGTT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACTTCCAGACACTAGGTaGAAATATAAGGAACAGATG +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRLPDTR*KYKEQM
Trigger: CATCTGTTCCTTATATTTTCACCTAGTGTCTGGAAG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGAAATGAATAGTAGGTaGGTGAGGAGTGGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPEMNSR*VRSGKD
Trigger: GTCCTTCCCACTCCTCACTCACCTACTATTCATTTC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATTTCTGGGCTGCTTCTaGCAAAAGTATACAATCCAA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRFLGCF*QKYTIQ
Trigger: TTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGAGTCGTTACAATCCTaGCTTTTATGTGAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRESLQS*LLCESS
Trigger: AGAGCTTTCACATAAAAGTCAGGATTGTAACGACTC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATTATGGTCCACAAACTaGAAGAAGTATTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRLWSTN*KKYSRS
Trigger: AGACCTGGAATACTTCTTTCAGTTTGTGGACCATAA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAAAGTTTCCAGACAGTTaGTTGGAGATCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLKFPDS*LEILGK
Trigger: TTTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCCCCCAGACCATTCTaGAATCATAATCTGTATTCA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSPRPF*NHNLYS
Trigger: TGAATACAGATTATGATTGCAGAATGGTCTGGGGGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGCTTCCTCATGGCCTCTaGACTCTACTCCTTCCATGC +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVLPHGL*TLLLPC
Trigger: GCATGGAAGGAGTAGAGTGCAGAGGCCATGAGGAAG...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACATCTCCTGTGTCTGTaGTTAACAGGGCTGATAATT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLHLLCL*LTGLII
Trigger: AATTATCAGCCCTGTTAAGCACAGACACAGGAGATG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATCACAACTAAGACACTaGCTGCTAATCCTGGAATAC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLSQLRH*LLILEY
Trigger: GTATTCCAGGATTAGCAGCCAGTGTCTTAGTTGTGA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTGAGCCTTCCTCAAACTaGAAATTCTTCAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTEPSSN*KFFSLQ
Trigger: CTGTAGGCTGAAGAATTTCCAGTTTGAGGAAGGCTC...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAACACCACAAACCAATTaGGAAAGAACAGCCTTTACA +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRTPQTN*ERTAFT
Trigger: TGTAAAGGCTGTTCTTTCCCAATTGGTTTGTGGTGT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGTCCTTAGTTAGCCATTaGAGGCACTCTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVSLVSH*RHSGLV
Trigger: GACCAGGCCAGAGTGCCTCCAATGGCTAACTAAGGA...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGGGTTTCAGGTGATGTaGATATGTCAGTGTAATGTG +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSGFQVM*ICQCNV
Trigger: CACATTACACTGACATATCCACATCACCTGAAACCC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
3UTR CAA 72 bp AAGAGTAGTTGCAAATTTAATGAGGAACCAGACATATaGATACAACGTCCTGTCCCTCCTGACATGACCAAG +
Preference number: 4 (lower is better)
Translates to: KSSCKFNEEPDI*IQRPVPPDMTK
Trigger: CTTGGTCATGTCAGGAGGGACAGGACGTTGTATCAATATGTCTGGTTCCTCATTAAATTTGCAACTACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATTTAAATCCAGTTTCTaGAAGAGGTTCATCTACTCC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRFKSSF*KRFIYS
Trigger: GGAGTAGATGAACCTCTTTCAGAAACTGGATTTAAA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCACCTTTCCCGAAGTCTTaGGTCATACTTTACCGTCAT +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPPFPKS*VILYRH
Trigger: ATGACGGTAAAGTATGACTCAAGACTTCGGGAAAGG...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTTGGAATACCGCTGTCTaGATTAACTTTAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTWNTAV*INFRAV
Trigger: CACAGCTCTAAAGTTAATTCAGACAGCGGTATTCCA...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGTCAGTCCATTTAGATaGTCCTGTAGGTTCATACAA +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSVSPFR*SCRFIQ
Trigger: TTGTATGAACCTACAGGATCATCTAAATGGACTGAC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGTATAGGGGAAGAGTATaGGGACTCAAAGTTACTCTC +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMYRGRV*GLKVTL
Trigger: GAGAGTAACTTTGAGTCCTCATACTCTTCCCCTATA...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGGGGGCTCGGGAAGAATaGGTCTGGAGCATATTGTTA +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVGAREE*VWSILL
Trigger: TAACAATATGCTCCAGACTCATTCTTCCCGAGCCCC...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATATACCAGCAGCTGCTaGTTGTTTAAATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLYTSSC*LFKSSF
Trigger: GAAACTGGATTTAAACAAGCAGCAGCTGCTGGTATA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGAAGTTTCCAGACAGTTaGTTGGAGATCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMKFPDS*LEILGK
Trigger: TTTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTT...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATTCCAGACAGTTGCTTaGAGATCCTTGGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPFQTVA*RSLGKL
Trigger: CAGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAATACACTGAACCGTTaGTTTAACTTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRNTLNR*FNFSSF
Trigger: GAAGGAAGAGAAGTTAAACCAACGGTTCAGTGTATT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGCTCTCATCTTGTATTaGCAAGTAAATCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLALILY*QVNPRQ
Trigger: CTGTCTTGGATTTACTTGCCAATACAAGATGAGAGC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGAAAACTGTTCTTTTTaGTCCGCTTCTTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLENCSF*SASFRI
Trigger: AATCCTGAAAGAAGCGGATCAAAAAGAACAGTTTTC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACTTCTAAGCACTGGATaGGATACTAAAAACATACAG +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLLLSTG*DTKNIQ
Trigger: CTGTATGTTTTTAGTATCTCATCCAGTGCTTAGAAG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTTGGTTTCCATTGACTTaGCTTTGGCAAGGCATTATT +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTWFPLT*LWQGII
Trigger: AATAATGCCTTGCCAAAGTCAAGTCAATGGAAACCA...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACATTTAGCAACATGGTaGCTTAAAAGCGAACTACAT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLHLATW*LKSELH
Trigger: ATGTAGTTCGCTTTTAAGTCACCATGTTGCTAAATG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGCTTCCAGACACTAGGTaGAAATATAAGGAACAGATG +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMLPDTR*KYKEQM
Trigger: CATCTGTTCCTTATATTTTCACCTAGTGTCTGGAAG...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTTACGTATTGAATAGATaGAGAGATGCATGTGACTCC +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTYVLNR*RDACDS
Trigger: GGAGTCACATGCATCTCTTCATCTATTCAATACGTA...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAGTAGACGGAAGGACATaGAGAAACATGACAACTAAA +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTVDGRT*RNMTTK
Trigger: TTTAGTTGTCATGTTTCTTCATGTCCTTCCGTCTAC...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGTATTATAAGCCCCTaGATAAGAACTTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTCIISP*IRTSEL
Trigger: GAGCTCAGAAGTTCTTATTCAGGGGCTTATAATACA...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTAAATATACCAGCAGCTaGTGCTTGTTTAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSKYTSS*CLFKSS
Trigger: ACTGGATTTAAACAAGCAGCAGCTGCTGGTATATTT...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAAAATATACCAGCAGCTaGTGCTTGTTTAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLKYTSS*CLFKSS
Trigger: ACTGGATTTAAACAAGCAGCAGCTGCTGGTATATTT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGTTTAAGACAGTCAGCTaGAAAGCCACAGTAACTAAG +
Preference number: 4 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMFKTVS*KATVTK
Trigger: CTTAGTTACTGTGGCTTTGCAGCTGACTGTCTTAAA...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGGGGTTTCACCATTGTTaGCCAGGCTGGTCTAGAATT +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVGFHHC*PGWSRI
Trigger: AATTCTAGACCAGCCTGGCCAACAATGGTGAAACCC...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAAGGACACATCCTTTCTaGGCTGCTTCTGACAAAAGT +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGRTHPF*AASDKS
Trigger: ACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCT...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACTTGTGTTCCGTCAATaGAAGAATAAACAAACTGTT +
Preference number: 4 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRLVFRQ*KNKQTV
Trigger: AACAGTTTGTTTATTCTTCCATTGACGGAACACAAG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGATAATAACAAATGTTaGCAAGGATGTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLDNNKC*QGCEAP
Trigger: AGGTGCTTCACATCCTTGCCAACATTTGTTATTATC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTCATTTAGCAACATGGTaGCTTAAAAGCGAACTACAT +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTHLATW*LKSELH
Trigger: ATGTAGTTCGCTTTTAAGTCACCATGTTGCTAAATG...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAAAAATGAGAGATCTATaGCATTCACAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPKMRDL*HSQMGG
Trigger: TCCTCCCATCTGTGAATGTCATAGATCTCTCATTTT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTTTTACCCAAGAGAAATaGAAACATACGTCCGCAAAA +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTFTQEK*KHTSAK
Trigger: TTTTGCGGACGTATGTTTTCATTTCTCTTGGGTAAA...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATTACCGTCATATCTTTaGAAAATTTGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLLPSYL*KICFSP
Trigger: TGGAGAGAAGCAAATTTTGCAAAGATATGACGGTAA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR GCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACACCTTCCTCTCACTTTTaGTGGGAAATTAAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTPSSHF*WEIKVS
Trigger: AGAAACTTTAATTTCCCAGCAAAAGTGAGAGGAAGG...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAGATATGGCCAAATATTaGACTTCCTGCATAAGCCTA +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPDMAKY*TSCISL
Trigger: TAGGCTTATGCAGGAAGTGCAATATTTGGCCATATC...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAAGCCACCTCAGCGATTaGTTGGTCACAAAATTACTA +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGSHLSD*LVTKLL
Trigger: TAGTAATTTTGTGACCAAGCAATCGCTGAGGTGGCT...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATTCAGAGGCTCAAAATaGTTAGATTTTGATGCAGAT +
Preference number: 4 (lower is better)
Translates to: RREVNKANGTPFRGSKWLFRGSK*LDFDAD
Trigger: ATCTGCATCAAAATCTAACCATTTTGAGCCTCTGAA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCACTTCTAAGCACTGGATaGGATACTAAAAACATACAG +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPLLSTG*DTKNIQ
Trigger: CTGTATGTTTTTAGTATCTCATCCAGTGCTTAGAAG...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATGTAATTATTCTCTATaGGGATACAGTAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPCNYSL*GYSSSV
Trigger: CACTGAGCTACTGTATCCTCATAGAGAATAATTACA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGATATACCAGCAGCTGCTaGTTGTTTAAATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGYTSSC*LFKSSF
Trigger: GAAACTGGATTTAAACAAGCAGCAGCTGCTGGTATA...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGTCACAACTAAGACACTaGCTGCTAATCCTGGAATAC +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVSQLRH*LLILEY
Trigger: GTATTCCAGGATTAGCAGCCAGTGTCTTAGTTGTGA...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp ACAGGTAAGCAAGTGGTGAATAAGTGTGAAGAGTATACAGCCATTCCTTCTACTTCCTCTCACTTTTGCTaGGAAATTAAAGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TGKQVVNKCEEYTAIPSTSSHFC*EIKVSL
Trigger: AAGAGAAACTTTAATTTCCCAGCAAAAGTGAGAGGA...AGTAGAAGGAATGGCTGTATACTCTTCACACTTATTCACCACTTGCTTACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACACCATGGAAAAAGATCTaGCAAGTGTCTTATAAAACT +
Preference number: 4 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTPWKKI*QVSYKT
Trigger: AGTTTTATAAGACACTTGCCAGATCTTTTTCCATGG...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR TCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAGAAAACTGTTCTTTTTaGTCCGCTTCTTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGENCSF*SASFRI
Trigger: AATCCTGAAAGAAGCGGATCAAAAAGAACAGTTTTC...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCAACTGTTGTGTATCTATaGATTGGAATTCAATGCAGT +
Preference number: 4 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPTVVYL*IGIQCS
Trigger: ACTGCATTGAATTCCAATGCATAGATACACAACAGT...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR GCA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGATTACCGTCATATCTTTaGAAAATTTGCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGLPSYL*KICFSP
Trigger: TGGAGAGAAGCAAATTTTGCAAAGATATGACGGTAA...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CCA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGAATACACTGAACCGTTaGTTTAACTTCTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVNTLNR*FNFSSF
Trigger: GAAGGAAGAGAAGTTAAACCAACGGTTCAGTGTATT...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS TCA 90 bp GAGAAGCAGGTGAGGGAACTGCGCCAGGTGTGGACGGGAAAGGCCTaGCGTTCCTTCCCCAGGCTGCCCTGGGGAGATGGCGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: EKQVRELRQVWTGKA*RSFPRLPWGDGGGG
Trigger: CCCGCCTCCGCCATCTCCCCAGGGCAGCCTGGGGAAGGAACGTCAGGCCTTTCCCGTCCACACCTGGCGCAGTTCCCTCACCTGCTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS GCA 90 bp GGTGCTGCTCCAGTGCTGTCTGCTGGAGGGAGGTGTTCCCTTCCGTaGAGGGCAGAGGCAACCTACACCCGGCTGGCTCTGGGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GAAPVLSAGGRCSLP*RAEATYTRLALGFL
Trigger: AAGGAAACCCAGAGCCAGCCGGGTGTAGGTTGCCTCTGCCCTGCACGGAAGGGAACACCTCCCTCCAGCAGACAGCACTGGAGCAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCTGCAGTGGCGCGACCTaGGCTCACTGCAAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCCSGAT*AHCKLH
Trigger: GTGGAGCTTGCAGTGAGCCAAGGTCGCGCCACTGCA...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCGGCATCTCATCTCACTaGAGTAAAAGCCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCGISSH*SKSPRP
Trigger: AGGCCTTGGGCTTTTACTCAAGTGAGATGAGATGCC...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS GCA 90 bp CTGTCCGTGGCATTAGTACCACCTAGTGGACTTCGCAGGAAGAACTaGATGTTGAAACCATGCGGACAGTCATTTACCAGAGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LSVALVPPSGLRRKN*MLKPCGQSFTRAAA
Trigger: CGCCGCCGCTCTGGTAAATGACTGTCCGCATGGTTTCAACATGCAGTTCTTCCTGCGAAGTCCACTAGGTGGTACTAATGCCACGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCAGCCACCTCAGCGATaGCTTGGTCACAAAATTACT +
Preference number: 5 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCQPPQR*LGHKIT
Trigger: AGTAATTTTGTGACCAAGCAATCGCTGAGGTGGCTG...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGCAGGGGCGCTGGTCTaGCTTTCTCAGGCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRAGALV*LSQAAQ
Trigger: CTGGGCGGCCTGAGAAAGCAAGACCAGCGCCCCTGC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp CCCTGGCCTTGCTTCTTCAAATGGCCCAACAGCCAGTGCTGCCATCTTCCCTGCCACACCACAAACCAATaGGGAAAGAACAGCCTTTAC +
Preference number: 5 (lower is better)
Translates to: PWPCFFKWPNSQCCHLPCHTTNQ*GKNSLY
Trigger: GTAAAGGCTGTTCTTTCCCAATTGGTTTGTGGTGTG...GCAGGGAAGATGGCAGCACTGGCTGTTGGGCCATTTGAAGAAGCAAGGCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS TCA 90 bp GATTTGGTCTGTAAGCTGCCAGTGTGCCATCTCTGGATTAGTCACTaGAGAGTCAGGGAAGGTGATGAACCAGCACCAGCCACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: DLVCKLPVCHLWISH*RVREGDEPAPATPD
Trigger: ATCTGGGGTGGCTGGTGCTGGTTCATCACCTTCCCTGACTCTTCAGTGACTAATCCAGAGATGGCACACTGGCAGCTTACAGACCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CCA 90 bp CTTGTCAGTTCTGGAGGCTGGAAGTTTGAGATGAGGGTACCATCATaGTTGGGTTCTGGTGAGGGCCTCTCCACATTACACGCTACTGAC +
Preference number: 5 (lower is better)
Translates to: LVSSGGWKFEMRVPS*LGSGEGLSTLHATD
Trigger: GTCAGTAGCGTGTAATGTGGAGAGGCCCTCACCAGAACCCAACCATGATGGTACCCTCATCTCAAACTTCCAGCCTCCAGAACTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537251.1
CDS-3UTR CAA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAAGCGGGTTCAGTCGGTaGTGGGGTGGGCAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: RREVNKANGTPFRGSKWLSGFSR*WGGQRV
Trigger: TACCCTCTGCCCACCCCACAACCGACTGAACCCGCT...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGAGCGACAGGCTCTGCTaGAAGCTGCGAGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMSDRLC*KLRAWG
Trigger: ACCCCAGGCTCGCAGCTTCAAGCAGAGCCTGTCGCT...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAAGCCTGCTCTCCACATaGCAAGCAGGATGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTSLLST*QAGWSC
Trigger: GCAGGACCATCCTGCTTGCAATGTGGAGAGCAGGCT...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGTCTGCAGGCTGGATTaGGTCTGTAAGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: RREVNKANGTPFRGSKWLVCRLD*VCKLPV
Trigger: CACTGGCAGCTTACAGACCAAATCCAGCCTGCAGAC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGTATTCCAGGTCTGTTaGTGGTGGAGAGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRVFQVC*WWRGLE
Trigger: CTCCAACCCTCTCCACCACAAACAGACCTGGAATAC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CCA 90 bp ACAGTTTCAATCACTGTGGGAGTCAAGCTAATTATGTCTGCAGGCTaGATTTGGTCTGTAAGCTGCCAGTGTGCCATCTCTGGATTAGTC +
Preference number: 5 (lower is better)
Translates to: TVSITVGVKLIMSAG*IWSVSCQCAISGLV
Trigger: GACTAATCCAGAGATGGCACACTGGCAGCTTACAGACCAAATCCAGCCTGCAGACATAATTAGCTTGACTCCCACAGTGATTGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTAGCTCACTTAGCGCTTaGCCTTCTACAACCCCGTAT +
Preference number: 5 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSSSLSA*PSTTPY
Trigger: ATACGGGGTTGTAGAAGGCAAAGCGCTAAGTGAGCT...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGAAGTTTCCAGACAGTaGCTTGGAGATCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLREVSRQ*LGDPWE
Trigger: TTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTTC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGTCCCTGCCTCCAACCTaGTGCTCCTATAGCACCCCC +
Preference number: 5 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVSLPPT*CSYSTP
Trigger: GGGGGTGCTATAGGAGCACAAGGTTGGAGGCAGGGA...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGCCAACATCCCTGGCCTaGCTTCTTCAAATGGCCCAA +
Preference number: 5 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMPTSLA*LLQMAQ
Trigger: TTGGGCCATTTGAAGAAGCAAGGCCAGGGATGTTGG...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAGGAAGAACTGCATGTaGAAACCATGCGGACAGTCA +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRRKNCM*KPCGQS
Trigger: TGACTGTCCGCATGGTTTCAACATGCAGTTCTTCCT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCCTTTCCCGAAGTCTaGAGTCATACTTTACCGTCA +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSFPEV*SHTLPS
Trigger: TGACGGTAAAGTATGACTCAAGACTTCGGGAAAGGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAGACTCATCCCTGTATaGGGAGTGACTGACATAAGT +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRRLIPV*GVTDIS
Trigger: ACTTATGTCAGTCACTCCCAATACAGGGATGAGTCT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGGTCTGGTGGGGGATGTaGATAGTAGGAGAAGCAATG +
Preference number: 5 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMVWWGM*IVGEAM
Trigger: CATTGCTTCTCCTACTATCAACATCCCCCACCAGAC...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCCCACAGGACAAAGTaGGGACTGTGTAACCATAAA +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSHRTK*GLCNHK
Trigger: TTTATGGTTACACAGTCCCAACTTTGTCCTGTGGGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTCCTGGCACCGAGATCTaGGTTTCTAAATACCATGCA +
Preference number: 5 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSPGTEI*VSKYHA
Trigger: TGCATGGTATTTAGAAACCAAGATCTCGGTGCCAGG...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTATTTCCAGACAGTTGCTaGGAGATCCTTGGGAAAACT +
Preference number: 5 (lower is better)
Translates to: RREVNKANGTPFRGSKWLFPDSC*EILGKT
Trigger: AGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAAA...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGACTGGTTTCCATTGACTaGACTTTGGCAAGGCATTAT +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRLVSID*TLARHY
Trigger: ATAATGCCTTGCCAAAGTCAAGTCAATGGAAACCAG...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS TCA 90 bp ATTCAGAAATATACCAGCAGCTGCTGCTTGTTTAAATCCAGTTTCTaGAAGAGGTTCATCTACTCCTTGTCAGTTCTGGAGGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: IQKYTSSCCLFKSSF*KRFIYSLSVLEAGS
Trigger: ACTTCCAGCCTCCAGAACTGACAAGGAGTAGATGAACCTCTTTCAGAAACTGGATTTAAACAAGCAGCAGCTGCTGGTATATTTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537251.1
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAAGGTTCATCTACTCCTaGTCCTTGGATTATTTTCTC +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRRFIYS*SLDYFL
Trigger: GAGAAAATAATCCAAGGACAAGGAGTAGATGAACCT...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTGTTGCTTGGAGATCCTaGGGAAAACTGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSVAWRS*GKLFFL
Trigger: CAAAAAGAACAGTTTTCCCAAGGATCTCCAAGCAAC...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTAGTTGCTTGGAGATCCTaGGGAAAACTGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: RREVNKANGTPFRGSKWLVAWRS*GKLFFL
Trigger: CAAAAAGAACAGTTTTCCCAAGGATCTCCAAGCAAC...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGAGACTCATCCCTGTATaGGGAGTGACTGACATAAGT +
Preference number: 5 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMRLIPV*GVTDIS
Trigger: ACTTATGTCAGTCACTCCCAATACAGGGATGAGTCT...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAAGCTGTACTTCCAAATaGATGGGGCCCAAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTSCTSK*MGPKER
Trigger: TCTTTCTTTGGGCCCCATCAATTTGGAAGTACAGCT...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CCAAGGACACATCCTTTCTGGGCTGCTTCTGACAAAAGTATACAATCCAAATCTACCTACTTAGCCATCTaGTTTGGACACAAAGGAACT +
Preference number: 5 (lower is better)
Translates to: PRTHPFWAASDKSIQSKSTYLAI*FGHKGT
Trigger: AGTTCCTTTGTGTCCAAACAAGATGGCTAAGTAGGT...AGATTTGGATTGTATACTTTTGTCAGAAGCAGCCCAGAAAGGATGTGTCCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGAGTGAAAGCTCTCATCTaGTATTGGCAAGTAAATCCA +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRVKALI*YWQVNP
Trigger: TGGATTTACTTGCCAATACAAGATGAGAGCTTTCAC...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS-3UTR CAA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCATCCTTTCCCGAAGTCTaGAGTCATACTTTACCGTCA +
Preference number: 5 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPSFPEV*SHTLPS
Trigger: TGACGGTAAAGTATGACTCAAGACTTCGGGAAAGGA...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CTTGTGTTCCGTCAATGGAAGAATAAACAAACTGTTGTGTATCTATGCATTGGAGAAGTTTCCAGACAGTaGCTTGGAGATCCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LVFRQWKNKQTVVYLCIGEVSRQ*LGDPWE
Trigger: TTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTTC...TCCAATGCATAGATACACAACAGTTTGTTTATTCTTCCATTGACGGAACACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CACGTGCCCTGTTTCAATACTGGTAGAAAACTGGTAGTGCTAGACACACTAAGATCCATTGACTTGACTTaGGCAAGGCATTATTTAGAA +
Preference number: 5 (lower is better)
Translates to: HVPCFNTGRKLVVLDTLRSIDLT*ARHYLE
Trigger: TTCTAAATAATGCCTTGCCAAAGTCAAGTCAATGGA...TCTTAGTGTGTCTAGCACTACCAGTTTTCTACCAGTATTGAAACAGGGCACGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGACACACAGTCCTGGATaGATTGGATTCTTGATTCAG +
Preference number: 5 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMTHSPG*IGFLIQ
Trigger: CTGAATCAAGAATCCAATCAATCCAGGACTGTGTGT...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS TCA 90 bp CGAATCAGCATGAAAGAAACCATAATAATGAGTAAACTCAAAGCTTaGAGCATAAACTCAAAGCTTCAGGGGGACAATGAGACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RISMKETIIMSKLKA*SINSKLQGDNETEA
Trigger: TGCCTCTGTCTCATTGTCCCCCTGAAGCTTTGAGTTTATGCTTCAAGCTTTGAGTTTACTCATTATTATGGTTTCTTTCATGCTGATTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CCA 90 bp AGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATaGTTAGATTTTGATGCAGATTTAACCTTAGCGAGTTTCAGTCAG +
Preference number: 5 (lower is better)
Translates to: REVNKANGTPFRGSK*LDFDADLTLASFSQ
Trigger: CTGACTGAAACTCGCTAAGGTTAAATCTGCATCAAAATCTAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp CAATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACAAGGTTCATCTACTCCTaGTCCTTGGATTATTTTCTC +
Preference number: 5 (lower is better)
Translates to: QLGKNSLYNGVGITVSTTRFIYS*SLDYFL
Trigger: GAGAAAATAATCCAAGGACAAGGAGTAGATGAACCT...TGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp ATTGGGAAAGAACAGCCTTTACAATGGTGTTGGGATAACTGTTTCAACCACATGGACAGAGACTTTGTTTaGGTTCATGGCTACATATTC +
Preference number: 5 (lower is better)
Translates to: IGKEQPLQWCWDNCFNHMDRDFV*VHGYIF
Trigger: GAATATGTAGCCATGAACCAAAACAAAGTCTCTGTC...CATGTGGTTGAAACAGTTATCCCAACACCATTGTAAAGGCTGTTCTTTCCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp TTGTTTGGACACAAAGGAACTGACACATACTTCAATCTGAAAGCTGTACTTCCACACCTCAGCGATTGCTaGGTCACAAAATTACTAAGA +
Preference number: 5 (lower is better)
Translates to: LFGHKGTDTYFNLKAVLPHLSDC*VTKLLR
Trigger: TCTTAGTAATTTTGTGACCAAGCAATCGCTGAGGTG...TGGAAGTACAGCTTTCAGATTGAAGTATGTGTCAGTTCCTTTGTGTCCAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp AGGAGAGAAGTAAATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATGGTTACTCAGGAAACACACATaGAAATTTTATAGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: RREVNKANGTPFRGSKWLLRKHT*KFYRGR
Trigger: TCTTCCCCTATAAAATTTCAATGTGTGTTTCCTGAG...TAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATTTACTTCTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS-3UTR CAA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGTTTCCAGACAGTTGCTaGGAGATCCTTGGGAAAACT +
Preference number: 5 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVFPDSC*EILGKT
Trigger: AGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAAA...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS TCA 90 bp ATTCAGAAATATACCAGCAGCTGCTGCTTGTTTAAATCCAGTTTCTaGAAGAGGTTCATCTACTCCTTGTCCTTGGATTATTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: IQKYTSSCCLFKSSF*KRFIYSLSLDYFLL
Trigger: AAGGAGAAAATAATCCAAGGACAAGGAGTAGATGAACCTCTTTCAGAAACTGGATTTAAACAAGCAGCAGCTGCTGGTATATTTCTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS-3UTR CAA 90 bp CATATTCACAGCTTTATCATAGTTGTAGTAGTTCTTAAAATAGCCTGGCATGTGACAAGGACAGAGACTTaGTTTTGGTTCATGGCTACA +
Preference number: 5 (lower is better)
Translates to: HIHSFIIVVVVLKIAWHVTRTET*FWFMAT
Trigger: TGTAGCCATGAACCAAAACAAAGTCTCTGTCCTTGT...CACATGCCAGGCTATTTTAAGAACTACTACAACTATGATAAAGCTGTGAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000179259.6
CDS TCA 72 bp AACCATGCGGACAGTCATTTACCAGAGCGGCGGCGGTaGGCGCAGCAGAAGGGCCAGGGTCCTCCGAGCGAA +
Preference number: 6 (lower is better)
Translates to: NHADSHLPERRR*AQQKGQGPPSE
Trigger: TTCGCTCGGAGGACCCTGGCCCTTCTGCTGCGCTCACCGCCGCCGCTCTGGTAAATGACTGTCCGCATGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CAA 90 bp TCTCCTCCGGGCGGTGTAAACACAGGGCACTCTTCCCTGGCTGCTTaGGCCATGGCCCTCAGCTCACTTAGCGCTTTGCCTTCTACAACC +
Preference number: 6 (lower is better)
Translates to: SPPGGVNTGHSSLAA*AMALSSLSALPSTT
Trigger: GGTTGTAGAAGGCAAAGCGCTAAGTGAGCTGAGGGCCATGGCCAAAGCAGCCAGGGAAGAGTGCCCTGTGTTTACACCGCCCGGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000179259.6
ENST00000537251.1
ENST00000635110.1
CDS CAA 90 bp GTGGCATTAGTACCACCTAGTGGACTTCGCAGGAAGAACTGCATGTaGAAACCATGCGGACAGTCATTTACCAGAGCGGCGGCGGTGAGC +
Preference number: 6 (lower is better)
Translates to: VALVPPSGLRRKNCM*KPCGQSFTRAAAVS
Trigger: GCTCACCGCCGCCGCTCTGGTAAATGACTGTCCGCATGGTTTCAACATGCAGTTCTTCCTGCGAAGTCCACTAGGTGGTACTAATGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS GCA 72 bp CTGCTTTGGCCATGGCCCTCAGCTCACTTAGCGCTTTaGCTTCTACAACCCCGTATTTCCTTTCCCGAAGTC +
Preference number: 6 (lower is better)
Translates to: LLWPWPSAHLAL*LLQPRISFPEV
Trigger: GACTTCGGGAAAGGAAATACGGGGTTGTAGAAGGCAAAGCGCTAAGTGAGCTGAGGGCCATGGCCAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000179259.6
ENST00000537251.1
ENST00000635110.1
CDS CAA 72 bp GCTGCTTTGGCCATGGCCCTCAGCTCACTTAGCGCTTaGCCTTCTACAACCCCGTATTTCCTTTCCCGAAGT +
Preference number: 6 (lower is better)
Translates to: AALAMALSSLSA*PSTTPYFLSRS
Trigger: ACTTCGGGAAAGGAAATACGGGGTTGTAGAAGGCAAAGCGCTAAGTGAGCTGAGGGCCATGGCCAAAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000179259.6
ENST00000537251.1
ENST00000635110.1
CDS TCA 72 bp TACCACCTAGTGGACTTCGCAGGAAGAACTGCATGTTaGAACCATGCGGACAGTCATTTACCAGAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: YHLVDFAGRTAC*NHADSHLPERR
Trigger: CCGCCGCTCTGGTAAATGACTGTCCGCATGGTTTCAACATGCAGTTCTTCCTGCGAAGTCCACTAGGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS TCA 72 bp TGTAAGCTGCCAGTGTGCCATCTCTGGATTAGTCACTaGAGAGTCAGGGAAGGTGATGAACCAGCACCAGCC +
Preference number: 6 (lower is better)
Translates to: CKLPVCHLWISH*RVREGDEPAPA
Trigger: GGCTGGTGCTGGTTCATCACCTTCCCTGACTCTTCAGTGACTAATCCAGAGATGGCACACTGGCAGCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CCA 72 bp TCTGGAGGCTGGAAGTTTGAGATGAGGGTACCATCATaGTTGGGTTCTGGTGAGGGCCTCTCCACATTACAC +
Preference number: 6 (lower is better)
Translates to: SGGWKFEMRVPS*LGSGEGLSTLH
Trigger: GTGTAATGTGGAGAGGCCCTCACCAGAACCCAACCATGATGGTACCCTCATCTCAAACTTCCAGCCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537251.1
CDS CAA 90 bp GGAGAGGTTATGGTCCACAAACTGAAAGAAGTATTCCAGGTCTGTTaGTGGTGGAGAGGGTTGGAGGAGGATGACTCCACTTGGGACTTA +
Preference number: 6 (lower is better)
Translates to: GEVMVHKLKEVFQVC*WWRGLEEDDSTWDL
Trigger: TAAGTCCCAAGTGGAGTCATCCTCCTCCAACCCTCTCCACCACAAACAGACCTGGAATACTTCTTTCAGTTTGTGGACCATAACCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CCA 72 bp GTGGGAGTCAAGCTAATTATGTCTGCAGGCTGGATTTaGTCTGTAAGCTGCCAGTGTGCCATCTCTGGATTA +
Preference number: 6 (lower is better)
Translates to: VGVKLIMSAGWI*SVSCQCAISGL
Trigger: TAATCCAGAGATGGCACACTGGCAGCTTACAGACCAAATCCAGCCTGCAGACATAATTAGCTTGACTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CAA 72 bp TGTGGGAGTCAAGCTAATTATGTCTGCAGGCTGGATTaGGTCTGTAAGCTGCCAGTGTGCCATCTCTGGATT +
Preference number: 6 (lower is better)
Translates to: CGSQANYVCRLD*VCKLPVCHLWI
Trigger: AATCCAGAGATGGCACACTGGCAGCTTACAGACCAAATCCAGCCTGCAGACATAATTAGCTTGACTCCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS GCA 72 bp GCATTAGTACCACCTAGTGGACTTCGCAGGAAGAACTaGATGTTGAAACCATGCGGACAGTCATTTACCAGA +
Preference number: 6 (lower is better)
Translates to: ALVPPSGLRRKN*MLKPCGQSFTR
Trigger: TCTGGTAAATGACTGTCCGCATGGTTTCAACATGCAGTTCTTCCTGCGAAGTCCACTAGGTGGTACTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CCA 72 bp AAAGAGGTTCATCTACTCCTTGTCAGTTCTGGAGGCTaGAAGTTTGAGATGAGGGTACCATCATGGTTGGGT +
Preference number: 6 (lower is better)
Translates to: KEVHLLLVSSGG*KFEMRVPSWLG
Trigger: ACCCAACCATGATGGTACCCTCATCTCAAACTTCCAGCCTCCAGAACTGACAAGGAGTAGATGAACCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537251.1
CDS TCA 72 bp TTGTTTCTCCATGAGGCAGTACGGTCTTTCTTCGTCTaGGAAGGAGAGGTTATGGTCCACAAACTGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LFLHEAVRSFFV*EGEVMVHKLKE
Trigger: TTCTTTCAGTTTGTGGACCATAACCTCTCCTTCTCAGACGAAGAAAGACCGTACTGCCTCATGGAGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CAA 90 bp TCTCTTCCTTCCTCAAAGTTTATGATAAAGAGACTCATCCCTGTATaGGGAGTGACTGACATAAGTTCAGATCTGCTCAGAGTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: SLPSSKFMIKRLIPV*GVTDISSDLLRVAG
Trigger: ACCAGCCACTCTGAGCAGATCTGAACTTATGTCAGTCACTCCCAATACAGGGATGAGTCTCTTTATCATAAACTTTGAGGAAGGAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS CAA 72 bp GAAATATCTCTGCCAAAGAAGTTTCCAGACAGTTGCTaGGAGATCCTTGGGAAAACTGTTCTTTTTGATCCG +
Preference number: 6 (lower is better)
Translates to: EISLPKKFPDSC*EILGKTVLFDP
Trigger: CGGATCAAAAAGAACAGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTTCTTTGGCAGAGATATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS CAA 90 bp CCCAAGAGTCGTTACAATCCTGACTTTTATGTGAAAGCTCTCATCTaGTATTGGCAAGTAAATCCAAGACAGTTTCAATCACTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: PKSRYNPDFYVKALI*YWQVNPRQFQSLWE
Trigger: CTCCCACAGTGATTGAAACTGTCTTGGATTTACTTGCCAATACAAGATGAGAGCTTTCACATAAAAGTCAGGATTGTAACGACTCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635110.1
CDS CAA 90 bp TTCCTAAAGGAAATATCTCTGCCAAAGAAGTTTCCAGACAGTTGCTaGGAGATCCTTGGGAAAACTGTTCTTTTTGATCCGCTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: FLKEISLPKKFPDSC*EILGKTVLFDPLLS
Trigger: TGAAAGAAGCGGATCAAAAAGAACAGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTTCTTTGGCAGAGATATTTCCTTTAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS TCA 72 bp GCCTTCTACAACCCCGTATTTCCTTTCCCGAAGTCTTaGGTCATACTTTACCGTCATATCTTTGCAAAATTT +
Preference number: 6 (lower is better)
Translates to: AFYNPVFPFPKS*VILYRHIFAKF
Trigger: AAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGACTTCGGGAAAGGAAATACGGGGTTGTAGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000179259.6
ENST00000537251.1
ENST00000635110.1
CDS CCA 72 bp AATAAAGCCAATGGCACTCCCTTCAGAGGCTCAAAATaGTTAGATTTTGATGCAGATTTAACCTTAGCGAGT +
Preference number: 6 (lower is better)
Translates to: NKANGTPFRGSK*LDFDADLTLAS
Trigger: ACTCGCTAAGGTTAAATCTGCATCAAAATCTAACCATTTTGAGCCTCTGAAGGGAGTGCCATTGGCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS CAA 72 bp TGCCTTCTACAACCCCGTATTTCCTTTCCCGAAGTCTaGAGTCATACTTTACCGTCATATCTTTGCAAAATT +
Preference number: 6 (lower is better)
Translates to: CLLQPRISFPEV*SHTLPSYLCKI
Trigger: AATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGACTTCGGGAAAGGAAATACGGGGTTGTAGAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000179259.6
ENST00000537251.1
ENST00000635110.1
CDS GCA 72 bp AAGGAAATATCTCTGCCAAAGAAGTTTCCAGACAGTTaGTTGGAGATCCTTGGGAAAACTGTTCTTTTTGAT +
Preference number: 6 (lower is better)
Translates to: KEISLPKKFPDS*LEILGKTVLFD
Trigger: ATCAAAAAGAACAGTTTTCCCAAGGATCTCCAAGCAACTGTCTGGAAACTTCTTTGGCAGAGATATTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000179259.6
ENST00000635110.1
CDS CAA 90 bp TATTTCCTTTCCCGAAGTCTTGAGTCATACTTTACCGTCATATCTTaGCAAAATTTGCTTCTCTCCAAAATTCCATGCATGGTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: YFLSRSLESYFTVIS*QNLLLSKIPCMVCF
Trigger: AAAGCAGACCATGCATGGAATTTTGGAGAGAAGCAAATTTTGCAAAGATATGACGGTAAAGTATGACTCAAGACTTCGGGAAAGGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000179259.6
ENST00000537251.1
ENST00000635110.1