RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIFAB (Homo sapiens)

Ensembl gene IDs: ENSG00000255833

Ensembl transcript IDs: ENST00000537858.2

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTaGCCAACTGGCTTCCCACCACTATGGGCCTCGCACTGCCCATGC +
Preference number: 1 (lower is better)
Translates to: STSCLPMASRPSHPS*PTGFPPLWASHCPC
Trigger: GCATGGGCAGTGCGAGGCCCATAGTGGTGGGAAGCCAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CCACTGCAGGGGTGGTGGAGGTCGCAATGCGCTGTCCCCACCACATaGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGC +
Preference number: 1 (lower is better)
Translates to: PLQGWWRSQCAVPTT*SLLASAPLCWLQPC
Trigger: GCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTGGTGGGGACAGCGCATTGCGACCTCCACCACCCCTGCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp CGGGCTCCCTCCCGCCTGGTCTGGCCTGTCTTCCTTCTGCTGCTATaGAGTTCATCCTGGGTCCCTGAGGGCCTCGCAGATGCTTCACTC +
Preference number: 1 (lower is better)
Translates to: RAPSRLVWPVFLLLL*SSSWVPEGLADASL
Trigger: GAGTGAAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAAGACAGGCCAGACCAGGCGGGAGGGAGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp GCACACATGTTCACTCAGGCACGTGGGCTGCCCTGCGGTGGGAGCTaGGAGAATGCAGTGGAGGTTGTTGGGAGGAACTCACCCGCCTGC +
Preference number: 1 (lower is better)
Translates to: AHMFTQARGLPCGGS*ENAVEVVGRNSPAC
Trigger: GCAGGCGGGTGAGTTCCTCCCAACAACCTCCACTGCATTCTCTCAGCTCCCACCGCAGGGCAGCCCACGTGCCTGAGTGAACATGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp GTTTCCGGGCTCCCTCCCGCCTGGTCTGGCCTGTCTTCCTTCTGCTaGTATGCAGTTCATCCTGGGTCCCTGAGGGCCTCGCAGATGCTT +
Preference number: 1 (lower is better)
Translates to: VSGLPPAWSGLSSFC*YAVHPGSLRASQML
Trigger: AAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAAGACAGGCCAGACCAGGCGGGAGGGAGCCCGGAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp AGCCCAGGGGTGGAGAGAGGGGTCAGACTAGAACCTATGGAGACTTaGTGGGCAACAGGCCTGGGCTCAGTCCAGCCAGCCCAACCTCTG +
Preference number: 1 (lower is better)
Translates to: SPGVERGVRLEPMET*WATGLGSVQPAQPL
Trigger: CAGAGGTTGGGCTGGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACCCCTCTCTCCACCCCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp CAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCTGTaGCCTTGGTGCCTCAGATTCCCTGGAGAGTGGGGTCTGGGATCA +
Preference number: 1 (lower is better)
Translates to: QLQTQRFESARGTGL*PWCLRFPGEWGLGS
Trigger: TGATCCCAGACCCCACTCTCCAGGGAATCTGAGGCACCAAGGGCACAGCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTGGCTaGAGAGGGCTGTCCCAAGTCTGGGAAGGGCCGTGGAGAAACCCC +
Preference number: 1 (lower is better)
Translates to: GSLWSCISVPPPGLG*RGLSQVWEGPWRNP
Trigger: GGGGTTTCTCCACGGCCCTTCCCAGACTTGGGACAGCCCTCTCCAGCCAAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CCAGGGGTGGAGAGAGGGGTCAGACTAGAACCTATGGAGACTTGGTaGGCAACAGGCCTGGGCTCAGTCCAGCCAGCCCAACCTCTGATT +
Preference number: 1 (lower is better)
Translates to: PGVERGVRLEPMETW*ATGLGSVQPAQPLI
Trigger: AATCAGAGGTTGGGCTGGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACCCCTCTCTCCACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GGCTGCCACCATGAGGGAAGCTGGAGGGAGGACCTGTTAACCTCATaGTACTGTGGCGACATCAGCCACCACTACGTGTCACGGGGTGGA +
Preference number: 1 (lower is better)
Translates to: GCHHEGSWREDLLTS*YCGDISHHYVSRGG
Trigger: TCCACCCCGTGACACGTAGTGGTGGCTGATGTCGCCACAGTACCATGAGGTTAACAGGTCCTCCCTCCAGCTTCCCTCATGGTGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp GGGTCCCTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTaGAGAGTCCCCTGTGGAGGAATTGAACTGCCCCCTCTCGCAGGA +
Preference number: 1 (lower is better)
Translates to: GSLRASQMLHSKDWS*RVPCGGIELPPLAG
Trigger: TCCTGCGAGAGGGGGCAGTTCAATTCCTCCACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTaGCTGGAGAGGGCTGTCCCAAGTCTGGGAAGGGCCGTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: WGFPLELYFCSSSRS*LERAVPSLGRAVEK
Trigger: TTTCTCCACGGCCCTTCCCAGACTTGGGACAGCCCTCTCCAGCCAAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp CCTCGTCTATATTTCCCACCCCCACGTCTGCATGACAGCGTGGCGTaGATGTGGCCCATCTGGGGATCAGGGAATCCTATTGGGTATGCC +
Preference number: 1 (lower is better)
Translates to: PRLYFPPPRLHDSVA*MWPIWGSGNPIGYA
Trigger: GGCATACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAGACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CAGGGCTGTGCCCTTGGTGCCTCAGATTCCCTGGAGAGTGGGGTCTaGGATCATGGTGACCATGTAGATCCCTCCCTGCATCACACTAGT +
Preference number: 1 (lower is better)
Translates to: QGCALGASDSLESGV*DHGDHVDPSLHHTS
Trigger: ACTAGTGTGATGCAGGGAGGGATCTACATGGTCACCATGATCCCAGACCCCACTCTCCAGGGAATCTGAGGCACCAAGGGCACAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CGCCTGGTCTGGCCTGTCTTCCTTCTGCTGCTATGCAGTTCATCCTaGGTCCCTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAG +
Preference number: 1 (lower is better)
Translates to: RLVWPVFLLLLCSSS*VPEGLADASLERLE
Trigger: CTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAAGACAGGCCAGACCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TCTAGCGTGTCTGCTGTGACTTCCTCATGGCAGAGCCCCACACTGTaGCTGTTTATGGAGCATTTGCAAGTCTCCCTCGAGGGGAGCCCG +
Preference number: 1 (lower is better)
Translates to: SSVSAVTSSWQSPTL*LFMEHLQVSLEGSP
Trigger: CGGGCTCCCCTCGAGGGAGACTTGCAAATGCTCCATAAACAGCCACAGTGTGGGGCTCTGCCATGAGGAAGTCACAGCAGACACGCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTaGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTC +
Preference number: 1 (lower is better)
Translates to: CLPPHLFAGCSLAAQ*AVVERIGSQFPFQL
Trigger: GAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GGTGAACGGCTGCAATGCAGGTTAGGCTGCCACCATGAGGGAAGCTaGAGGGAGGACCTGTTAACCTCATGGTACTGTGGCGACATCAGC +
Preference number: 1 (lower is better)
Translates to: GERLQCRLGCHHEGS*REDLLTSWYCGDIS
Trigger: GCTGATGTCGCCACAGTACCATGAGGTTAACAGGTCCTCCCTCCAGCTTCCCTCATGGTGGCAGCCTAACCTGCATTGCAGCCGTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp GGCCCAGCTCCCAGCTCCCATCCTCAGGAAACCCTGAGCCCTGCCTaGATCCTTTCCAGAAATGTGAGTCCCACCTTTCCAATTTCCTCT +
Preference number: 1 (lower is better)
Translates to: GPAPSSHPQETLSPA*ILSRNVSPTFPISS
Trigger: AGAGGAAATTGGAAAGGTGGGACTCACATTTCTGGAAAGGATGCAGGCAGGGCTCAGGGTTTCCTGAGGATGGGAGCTGGGAGCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp ATCCTCCTGCCCTTGGCGTACCTGGCTCCTAACGAGTCCCTTATTTaGAAGGAATTCCCCCACCCCCATTGGTGTGTGACTCACCCTGAG +
Preference number: 1 (lower is better)
Translates to: ILLPLAYLAPNESLI*KEFPHPHWCVTHPE
Trigger: CTCAGGGTGAGTCACACACCAATGGGGGTGGGGGAATTCCTTCCAAATAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCAGGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTaGCTCCTAACGAGTCCCTTATTTGGAAGGAATTCCCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: CCPCSPRKSSCPWRT*LLTSPLFGRNSPTP
Trigger: GGGGGTGGGGGAATTCCTTCCAAATAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TTCAGCTCTGGAAAGGCCACCGGGAACACAAGAGCCAACAACCCATaGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGG +
Preference number: 1 (lower is better)
Translates to: FSSGKATGNTRANNP*PLSARNLRSHRADR
Trigger: CCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCTTGTGTTCCCGGTGGCCTTTCCAGAGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CATCTCCTCTTAACTGGGCTGGGTTGTTTACTCCTCCCACAGTCTTaGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGGCTGC +
Preference number: 1 (lower is better)
Translates to: HLLLTGLGCLLLPQS*MGFEGLVRCPVNGC
Trigger: GCAGCCGTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAGTAAACAACCCAGCCCAGTTAAGAGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp ATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATaGCAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCC +
Preference number: 1 (lower is better)
Translates to: ISSYTSSIFPTPTSA*QRGVHVAHLGIRES
Trigger: GGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp CTGGCCTGTCTTCCTTCTGCTGCTATGCAGTTCATCCTGGGTCCCTaGGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAG +
Preference number: 1 (lower is better)
Translates to: LACLPSAAMQFILGP*GPRRCFTRKIGVAE
Trigger: CTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAAGACAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp TCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTaGATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGA +
Preference number: 1 (lower is better)
Translates to: SNFLLHLVYISHPHV*MTAWRACGPSGDQG
Trigger: TCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp GGCGTGGCAAATAGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTaGCCTTGGCGTACCTGGCTCCTAACGAGTCCCTTATTTGGAAGG +
Preference number: 1 (lower is better)
Translates to: GVANSCCPCSPRKSS*PWRTWLLTSPLFGR
Trigger: CCTTCCAAATAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCTATTTGCCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CCACCCCCACGTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTaGGGATCAGGGAATCCTATTGGGTATGCCAGCTTAATGAAATAC +
Preference number: 1 (lower is better)
Translates to: PPPRLHDSVACMWPI*GSGNPIGYASLMKY
Trigger: GTATTTCATTAAGCTGGCATACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CTATATTTCCCACCCCCACGTCTGCATGACAGCGTGGCGTGCATGTaGCCCATCTGGGGATCAGGGAATCCTATTGGGTATGCCAGCTTA +
Preference number: 1 (lower is better)
Translates to: LYFPPPRLHDSVACM*PIWGSGNPIGYASL
Trigger: TAAGCTGGCATACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATGACAGCGTaGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTATTGGGT +
Preference number: 1 (lower is better)
Translates to: LHLVYISHPHVCMTA*RACGPSGDQGILLG
Trigger: ACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CTCCTTTGGGTTAAGCATCACGTTCTCAGTCCTTTCCTGTGTGGATaGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCG +
Preference number: 1 (lower is better)
Translates to: LLWVKHHVLSPFLCG*SVGTVRRVLQVDAS
Trigger: CGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCACACAGGAAAGGACTGAGAACGTGATGCTTAACCCAAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp AGGGATAGTGATATCAAGTGCGAAGACCAGGCCCTGAAGCCAGCCTaGCGGTTCCAGCTGTTAGGAGAAAGTGAAGGTGGGTGCCATGGA +
Preference number: 1 (lower is better)
Translates to: RDSDIKCEDQALKPA*RFQLLGESEGGCHG
Trigger: TCCATGGCACCCACCTTCACTTTCTCCTAACAGCTGGAACCGTCAGGCTGGCTTCAGGGCCTGGTCTTCGCACTTGATATCACTATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp AGAGAATGCAGTGGAGGTTGTTGGGAGGAACTCACCCGCCTGCTCTaGCTGTCTGAGCAGGTGAGGGATAGTGATATCAAGTGCGAAGAC +
Preference number: 1 (lower is better)
Translates to: RECSGGCWEELTRLL*LSEQVRDSDIKCED
Trigger: GTCTTCGCACTTGATATCACTATCCCTCACCTGCTCAGACAGCCAGAGCAGGCGGGTGAGTTCCTCCCAACAACCTCCACTGCATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp AGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTaGTGCTCCGTAATGCATAGTTGGGGGACCATTTTGGTCAGTGAC +
Preference number: 1 (lower is better)
Translates to: RYSLQAVASRVLYVG*CSVMHSWGTILVSD
Trigger: GTCACTGACCAAAATGGTCCCCCAACTATGCATTACGGAGCAGCAACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GCTCCTAACGAGTCCCTTATTTGGAAGGAATTCCCCCACCCCCATTaGTGTGTGACTCACCCTGAGCGAAATAACTGCTGGGCTGAGTTC +
Preference number: 1 (lower is better)
Translates to: APNESLIWKEFPHPH*CVTHPERNNCWAEF
Trigger: GAACTCAGCCCAGCAGTTATTTCGCTCAGGGTGAGTCACACACCAATGGGGGTGGGGGAATTCCTTCCAAATAAGGGACTCGTTAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp TTGCAAGTCTCCCTCGAGGGGAGCCCGTGTCTCTCACGGACAGCTTaGCAAGATTCACATTCTTGGAAAAGCAGAGGAATGCGAGGGTTA +
Preference number: 1 (lower is better)
Translates to: LQVSLEGSPCLSRTA*QDSHSWKSRGMRGL
Trigger: TAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCCCTCGAGGGAGACTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GCATCCAGGACTATGCTGTCTAGCGTGTCTGCTGTGACTTCCTCATaGCAGAGCCCCACACTGTGGCTGTTTATGGAGCATTTGCAAGTC +
Preference number: 1 (lower is better)
Translates to: ASRTMLSSVSAVTSS*QSPTLWLFMEHLQV
Trigger: GACTTGCAAATGCTCCATAAACAGCCACAGTGTGGGGCTCTGCCATGAGGAAGTCACAGCAGACACGCTAGACAGCATAGTCCTGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp AGATCTGGCACAAGGTGGGTGCTTGGTGAAGGTTTGCTGAATGAATaGGGAACTGCTTTGGGGGTCCCAAGGGGTCATTCACAGCATCAG +
Preference number: 1 (lower is better)
Translates to: RSGTRWVLGEGLLNE*GTALGVPRGHSQHQ
Trigger: CTGATGCTGTGAATGACCCCTTGGGACCCCCAAAGCAGTTCCTCATTCATTCAGCAAACCTTCACCAAGCACCCACCTTGTGCCAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp TACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTGCTaGTCCGTAATGCATAGTTGGGGGACCATTTTGGTCAGTGACAGA +
Preference number: 1 (lower is better)
Translates to: YSLQAVASRVLYVGC*SVMHSWGTILVSDR
Trigger: TCTGTCACTGACCAAAATGGTCCCCCAACTATGCATTACGGAGCAGCAACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp CCTAAAGACCTTGCCCTCAAGTCAACCAAGGCCTTGATCCAGAAGTaGCAGAGAATGCGGAGTGTGAGGATGAGGATGATAAGGGGGACA +
Preference number: 1 (lower is better)
Translates to: PKDLALKSTKALIQK*QRMRSVRMRMIRGT
Trigger: TGTCCCCCTTATCATCCTCATCCTCACACTCCGCATTCTCTGTCACTTCTGGATCAAGGCCTTGGTTGACTTGAGGGCAAGGTCTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp ACGAGTCCCTTATTTGGAAGGAATTCCCCCACCCCCATTGGTGTGTaGCTCACCCTGAGCGAAATAACTGCTGGGCTGAGTTCTTACACA +
Preference number: 1 (lower is better)
Translates to: TSPLFGRNSPTPIGV*LTLSEITAGLSSYT
Trigger: TGTGTAAGAACTCAGCCCAGCAGTTATTTCGCTCAGGGTGAGTCACACACCAATGGGGGTGGGGGAATTCCTTCCAAATAAGGGACTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp GATGCAGCTCAAGTATTTCAAATCCTGTTTCATCTAGCAAAGGCTTaGTCTAGTGGCAGGGCTAGCAGAGTGCACTGTCTGGGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: DAAQVFQILFHLAKA*SSGRASRVHCLGVP
Trigger: GGGAACCCCCAGACAGTGCACTCTGCTAGCCCTGCCACTAGAGCAAGCCTTTGCTAGATGAAACAGGATTTGAAATACTTGAGCTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp TACCAGGGCATCTCCCATTATACTAACCCTGCCTATTGGACCTTCTaGTGCAAGGAGCAGATTAAAATCCCCTCCCTGTTGCCTACCAGG +
Preference number: 1 (lower is better)
Translates to: YQGISHYTNPAYWTF*CKEQIKIPSLLPTR
Trigger: CCTGGTAGGCAACAGGGAGGGGATTTTAATCTGCTCCTTGCATCAGAAGGTCCAATAGGCAGGGTTAGTATAATGGGAGATGCCCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp CAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTATTaGGTATGCCAGCTTAATGAAATACTTGCAGTTTATTACACTCAG +
Preference number: 1 (lower is better)
Translates to: QRGVHVAHLGIRESY*VCQLNEILAVYYTQ
Trigger: CTGAGTGTAATAAACTGCAAGTATTTCATTAAGCTGGCATACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GGGAGCCCGTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTTaGAAAAGCAGAGGAATGCGAGGGTTAAAATACCTTAAAGGGCAA +
Preference number: 1 (lower is better)
Translates to: GSPCLSRTAWQDSHS*KSRGMRGLKYLKGQ
Trigger: TTGCCCTTTAAGGTATTTTAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACACGGGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp TTATTACACTCAGGCTTTCCTAAGCCCCGCGTGCCTGTGGGTATTTaGAAGCTGAAGGTAACCCCAAGCTACCACAAATGTAATTGTTAC +
Preference number: 1 (lower is better)
Translates to: LLHSGFPKPRVPVGI*KLKVTPSYHKCNCY
Trigger: GTAACAATTACATTTGTGGTAGCTTGGGGTTACCTTCAGCTTTCAAATACCCACAGGCACGCGGGGCTTAGGAAAGCCTGAGTGTAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 90 bp CATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATaGTGCAGCTCAAGTATTTCAAATCCTGTTTCATCTAGCAAAGGC +
Preference number: 1 (lower is better)
Translates to: HYEQGSQWVLLVNLA*CSSSISNPVSSSKG
Trigger: GCCTTTGCTAGATGAAACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 90 bp TGTTTGCAGAATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTaGTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTG +
Preference number: 1 (lower is better)
Translates to: CLQNWFIMSKAASGF*LSTLHDAAQVFQIL
Trigger: CAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATTCTGCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 90 bp GAGGTAAGTACTGTGAACTTTCCCGTTTTCTACAAGAAGAAACTGTaGCACGGAGAGATTCAGTTACTTGTCCAGGATCACAGAACTATA +
Preference number: 1 (lower is better)
Translates to: EVSTVNFPVFYKKKL*HGEIQLLVQDHRTI
Trigger: TATAGTTCTGTGATCCTGGACAAGTAACTGAATCTCTCCGTGCCACAGTTTCTTCTTGTAGAAAACGGGAAAGTTCACAGTACTTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGCGAAGACCAGGCCCTaGAGCCAGCCTGACGGTTCC +
Preference number: 2 (lower is better)
Translates to: WMECWHSEAGVASGRVGGAKTRP*SQPDGS
Trigger: GGAACCGTCAGGCTGGCTTCAGGGCCTGGTCTTCGC...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTTGGGGAGTGGCACCCTaGGAACTCTGGGGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: WMECWHSEAGVASGRVGGWGVAP*ELWGFP
Trigger: GGGGAAACCCCAGAGTTCCCAGGGTGCCACTCCCCA...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGCCCAAAGTTCTCTGGTaGAGCTGGGGAGTGGCACCC +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLPKVLW*SWGVAP
Trigger: GGGTGCCACTCCCCAGCTCCACCAGAGAACTTTGGG...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAGCTCCGTGTGGATGGTaGGCCCTCCTCTCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: PWPLSARNLRSHRADRHGAPCGW*ALLSQV
Trigger: GACCTGAGAGAGGAGGGCTCACCATCCACACGGAGC...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp CTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTaGGCTGGAGAGGGCTGTCCCAAGTCTGGGAAGGGCCGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: LGVPSGAVFLFLLQV*AGEGCPKSGKGRGE
Trigger: TTCTCCACGGCCCTTCCCAGACTTGGGACAGCCCTCTCCAGCCAAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp CCCTGGGAACTCTGGGGTTTCCCCACCAGCTCCTCTCTCCAGTCTTaGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: PWELWGFPTSSSLQS*VSRYSLQAVASRVL
Trigger: CAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAAAGACTGGAGAGAGGAGCTGGTGGGGAAACCCCAGAGTTCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCGCCCTGAAGCCAGCCTaGCGGTTCCAGCTGTTAGGA +
Preference number: 2 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPALKPA*RFQLLG
Trigger: TCCTAACAGCTGGAACCGTCAGGCTGGCTTCAGGGC...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGGACCTCCTTGTAGCTTaGCCTGGGTGCAAAACGATC +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLDLLVA*PGCKTI
Trigger: GATCGTTTTGCACCCAGGGCAAGCTACAAGGAGGTC...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGTGGAGGAATTGAACTaGCCCCTCTCGCAGGACCCC +
Preference number: 2 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNVEELN*PLSQDP
Trigger: GGGGTCCTGCGAGAGGGGGCAGTTCAATTCCTCCAC...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACAGGAACTCACCCGCCTaGTCTGGCTGTCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNRNSPA*SGCLSR
Trigger: CCTGCTCAGACAGCCAGAGCAGGCGGGTGAGTTCCT...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp GTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTAGGGCTGTCCCAAGTCTaGGAAGGGCCGTGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: VCMTAWRACGPSGDQGILGLSQV*EGPWRN
Trigger: GTTTCTCCACGGCCCTTCCCAGACTTGGGACAGCCC...TAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTTGCCCTTGGCGTACCTaGCTCCTAACGAGTCCCTTA +
Preference number: 2 (lower is better)
Translates to: WMECWHSEAGVASGRVGGCPWRT*LLTSPL
Trigger: TAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCA...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGACAGTCTCCAGGCCGTaGCTTCTCGAGTTCTGTATG +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLTVSRP*LLEFCM
Trigger: CATACAGAACTCGAGAAGCCACGGCCTGGAGACTGT...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGCCTGCCTTGTGGCTGTaGTCTGAGTGTTTTTGCTTC +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLPALWL*SECFCF
Trigger: GAAGCAAAAACACTCAGATCACAGCCACAAGGCAGG...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTCATCTAGCAAAGGCTTaGTCTAGTGGCAGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: WMECWHSEAGVASGRVGGHLAKA*SSGRAS
Trigger: GCTAGCCCTGCCACTAGAGCAAGCCTTTGCTAGATG...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAGTGGCTTCTTCTCCTTaGCAGCCCTACCAGGGCATC +
Preference number: 2 (lower is better)
Translates to: PWPLSARNLRSHRADRHGVASSP*QPYQGI
Trigger: GATGCCCTGGTAGGGCTGGCAAGGAGAAGAAGCCAC...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGGAGCAAGGCAGCCAGTaGGTTTTGCTTGTCAACCTT +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLEQGSQ*VLLVNL
Trigger: AAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTC...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTAGCGTGGCGTGCATGTaGCCCATCTGGGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCSVACM*PIWGSG
Trigger: CCCTGATCCCCAGATGGGCCACATGCACGCCACGCT...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTCTTCTCAGCATGGCGTaGCAAATAGCTGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: WMECWHSEAGVASGRVGGLLSMA*QIAAAL
Trigger: AAGGGCAGCAGCTATTTGCCACGCCATGCTGAGAAG...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGCACCCTGGGAACTCTaGGGTTTCCCCACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCAPWEL*GFPTSS
Trigger: GGAGCTGGTGGGGAAACCCCAGAGTTCCCAGGGTGC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGAGAATTGGTTCATTATaGGCAAGGCAGCCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLRIGSL*ARQPVG
Trigger: ACCCACTGGCTGCCTTGCTCATAATGAACCAATTCT...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCGATGCTCAGGGCCTGTaGGTGAAGTTGGACCTCCTT +
Preference number: 2 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPDAQGL*VKLDLL
Trigger: AAGGAGGTCCAACTTCACTCACAGGCCCTGAGCATC...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGCTTGTGGCTGTGATCTaGGTGTTTTTGCTTCATCCC +
Preference number: 2 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLLVAVI*VFLLHP
Trigger: GGGATGAAGCAAAAACACTCAGATCACAGCCACAAG...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGGGGACAGGAAGTGCTaGCTGAGAACTGTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNGDRKC*LRTVSL
Trigger: CAGAGAGACAGTTCTCAGTCAGCACTTCCTGTCCCC...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTGCAGGGCTAGCAGAGTaGACTGTCTGGGGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGAGLAE*TVWGFP
Trigger: AGGGAACCCCCAGACAGTGCACTCTGCTAGCCCTGC...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCCCACCCCCACGTCTaGATGACAGCGTGGCGTGCA +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGSHPHV*MTAWRA
Trigger: TGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTTCTGGGGGTTCCCTCTaGAGCTGTATTTCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: WMECWHSEAGVASGRVGGSGGSL*SCISVP
Trigger: AGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGA...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTTCATCCTGGGTCCCTaGGGGCCTCGCAGATGCTTC +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGFILGP*GPRRCF
Trigger: GAAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGGAGTGTTGGCACAGTaGGGCGGGTGTTGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFGVLAQ*GGCCKW
Trigger: CCACTTGCAACACCCGCCTCACTGTGCCAACACTCC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTCCGAGAAAATCCTCCTaGCCTTGGCGTACCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGPRKSS*PWRTWL
Trigger: GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGG...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCCTCCTCCAGGTCTTaGCTGGAGAGGGCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGSSSRS*LERAVP
Trigger: TGGGACAGCCCTCTCCAGCCAAGACCTGGAGGAGGA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGCAGAGTGCACTGTCTaGGGGTTCCCTCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGAECTV*GFPLEL
Trigger: CAGCTCCAGAGGGAACCCCCAGACAGTGCACTCTGC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCGTGTCCACGCATTCCTaGTGCAACCTCAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLVSTHS*CNLKLL
Trigger: CAGGAGTTTGAGGTTGCACCAGGAATGCGTGGACAC...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGAGTGCCTCAGATTCCCTaGAGAGTGGGGTCTGGGATC +
Preference number: 2 (lower is better)
Translates to: LGSGASLLGCESSLAPCGVPQIP*RVGSGI
Trigger: GATCCCAGACCCCACTCTCCAGGGAATCTGAGGCAC...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGAACAGGGCTGTGCCCTTaGTGCCTCAGATTCCCTGGA +
Preference number: 2 (lower is better)
Translates to: LGSGASLLGCESSLAPCGTGLCP*CLRFPG
Trigger: TCCAGGGAATCTGAGGCACCAAGGGCACAGCCCTGT...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp TCCCTGCCTTGTGGCTGTGATCTGAGTGTTTTTGCTTCATCCCTATaGGAGAGGAAGCTTCCCACACCAGGGCAAGCCTGGGTCTTGCCC +
Preference number: 2 (lower is better)
Translates to: SLPCGCDLSVFASSL*ERKLPTPGQAWVLP
Trigger: GGGCAAGACCCAGGCTTGCCCTGGTGTGGGAAGCTTCCTCTCCAATAGGGATGAAGCAAAAACACTCAGATCACAGCCACAAGGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGAGGGGAACAGGGCTGTaGCCTTGGTGCCTCAGATTC +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGRGTGL*PWCLRF
Trigger: GAATCTGAGGCACCAAGGGCACAGCCCTGTTCCCCT...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGATCAGTTCCGTGGCTTTaGACAGATCTGGCACAAGGT +
Preference number: 2 (lower is better)
Translates to: PWPLSARNLRSHRADRHGSVPWL*TDLAQG
Trigger: ACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGA...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGATTCCTTCTGCTGCTATaGAGTTCATCCTGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: PWPLSARNLRSHRADRHGFLLLL*SSSWVP
Trigger: AGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAA...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGACACCAGGGCAAGCCTaGGTCTTGCCCACCTCTGTT +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGTPGQA*VLPTSV
Trigger: AACAGAGGTGGGCAAGACCCAGGCTTGCCCTGGTGT...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCGCAGGACCCCAGCTaGCAAGGTTTTGTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGSQDPS*QGFVPP
Trigger: GGGAGGAACAAAACCTTGCCAGCTGGGGTCCTGCGA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCCTATGCAGTTCATCCTaGGTCCCTGAGGGCCTCGCA +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFLCSSS*VPEGLA
Trigger: TGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAG...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGCTGAGAGAATGCAGTaGAGGTTGTTGGGAGGAACT +
Preference number: 2 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNAERMQ*RLLGGT
Trigger: AGTTCCTCCCAACAACCTCCACTGCATTCTCTCAGC...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGGTCTGGGATCATGGTaGCCATGTAGATCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFGLGSW*PCRSLP
Trigger: AGGGAGGGATCTACATGGTCACCATGATCCCAGACC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCAAATCCCCTCCCTGTTaGCTACCAGGTCCGTGGCTA +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFKSPPC*LPGPWL
Trigger: TAGCCACGGACCTGGTAGGCAACAGGGAGGGGATTT...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACCTGTATGTGGGTTGCTaGTCCGTAATGCATAGTTGG +
Preference number: 2 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNLYVGC*SVMHSW
Trigger: CCAACTATGCATTACGGAGCAGCAACCCACATACAG...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTATTCCCAAAGTTCTCTaGTGGAGCTGGGGAGTGGCA +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCIPKVL*WSWGVA
Trigger: TGCCACTCCCCAGCTCCACCAGAGAACTTTGGGAAT...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGACCCCCACGTCTGCATaGCAGCGTGGCGTGCATGTG +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKTPTSA*QRGVHV
Trigger: CACATGCACGCCACGCTGTCATGCAGACGTGGGGGT...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCACCCCCATTGGTGTGTaGCTCACCCTGAGCGAAATA +
Preference number: 2 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGTPIGV*LTLSEI
Trigger: TATTTCGCTCAGGGTGAGTCACACACCAATGGGGGT...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGGTTTGCTGAATGAATaGGGAACTGCTTTGGGGGTC +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCGLLNE*GTALGV
Trigger: GACCCCCAAAGCAGTTCCTCATTCATTCAGCAAACC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTTCCTAAGCCCCGCGTaGCTGTGGGTATTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGFLSPA*LWVFES
Trigger: GCTTTCAAATACCCACAGGCACGCGGGGCTTAGGAA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCACCCTGAGCCCTGCCTaGATCCTTTCCAGAAATGTG +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFTLSPA*ILSRNV
Trigger: CACATTTCTGGAAAGGATGCAGGCAGGGCTCAGGGT...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAGAAAGTGAAGGTGGGTaGCATGGATCTGATGATTTC +
Preference number: 2 (lower is better)
Translates to: PWPLSARNLRSHRADRHGESEGG*HGSDDF
Trigger: GAAATCATCAGATCCATGGCACCCACCTTCACTTTC...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTAATGAGGAACTGCTTTaGGGGTCCCAAGGGGTCATT +
Preference number: 2 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGNEELL*GSQGVI
Trigger: AATGACCCCTTGGGACCCCCAAAGCAGTTCCTCATT...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp CCTGAGGGAGTTTGCCTTATTCACTTCTGGTTCAGTTCCGTGGCTTaGCACAGATCTGGCACAAGGTGGGTGCTTGGTGAAGGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: PEGVCLIHFWFSSVA*HRSGTRWVLGEGLL
Trigger: CAGCAAACCTTCACCAAGCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAATAAGGCAAACTCCCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCCTTGTCAACCTTGCATaGTGCAGCTCAAGTATTTCA +
Preference number: 2 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPLVNLA*CSSSIS
Trigger: TGAAATACTTGAGCTGCATCATGCAAGGTTGACAAG...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCCCCCAGGGTTCTGCTTaGGTTAGAGCTACAAAGTCT +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFPQGSA*VRATKS
Trigger: AGACTTTGTAGCTCTAACTCAAGCAGAACCCTGGGG...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGCAGCCAGTGGGTTTTaGTTGTCAACCTTGCATGAT +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCAASGF*LSTLHD
Trigger: ATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTCCTGAGCGAAATAACTaGTGGGCTGAGTTCTTACAC +
Preference number: 2 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGPERNN*WAEFLH
Trigger: GTGTAAGAACTCAGCCCAGCAGTTATTTCGCTCAGG...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGTGGCAAATAGCTGCTaGCCTTGTTCACCGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCVANSC*PCSPRK
Trigger: TTTTCTCGGTGAACAAGGGCAGCAGCTATTTGCCAC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGCCTCCAGGTCTTGGCTaGAGAGGGCTGTCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKPPGLG*RGLSQV
Trigger: GACTTGGGACAGCCCTCTCCAGCCAAGACCTGGAGG...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTGCATGTGGCCCATCTaGGGATCAGGGAATCCTATT +
Preference number: 2 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGCMWPI*GSGNPI
Trigger: AATAGGATTCCCTGATCCCCAGATGGGCCACATGCA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGAGCGAAATAACTGCTaGGCTGAGTTCTTACACAAA +
Preference number: 2 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNERNNC*AEFLHK
Trigger: TTTGTGTAAGAACTCAGCCCAGCAGTTATTTCGCTC...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCAACGAGTCCCTTATTTaGAAGGAATTCCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFNESLI*KEFPHP
Trigger: GGGGTGGGGGAATTCCTTCCAAATAAGGGACTCGTT...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTTGCTTCATCCCTATTaGAGAGGAAGCTTCCCACAC +
Preference number: 2 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGLLHPY*RGSFPH
Trigger: GTGTGGGAAGCTTCCTCTCCAATAGGGATGAAGCAA...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp ACAACTAAATCCCTAGTTGGGGAATCACAGAGCACAGGTAAGCCCTaGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCT +
Preference number: 2 (lower is better)
Translates to: TTKSLVGESQSTGKP*GSGASLLGCESSLA
Trigger: AGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAAGGGCTTACCTGTGCTCTGTGATTCCCCAACTAGGGATTTAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGACCATTTTGGTCAGTaGCAGATCACTGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCDHFGQ*QITAAF
Trigger: AAAAGCAGCAGTGATCTGTCACTGACCAAAATGGTC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGACCCTGCGGTGGGAGCTaGGAGAATGCAGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRPCGGS*ENAVEV
Trigger: AACCTCCACTGCATTCTCTCAGCTCCCACCGCAGGG...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCAGAACTGTCTCTCTGTaGCATGCACCCTGTCAAATC +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFRTVSL*HAPCQI
Trigger: GATTTGACAGGGTGCATGTCACAGAGAGACAGTTCT...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGACATGACAGCGTGGCGTaGATGTGGCCCATCTGGGGA +
Preference number: 2 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRHDSVA*MWPIWG
Trigger: TCCCCAGATGGGCCACATGCACGCCACGCTGTCATG...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCATCAGGGAATCCTATTaGGTATGCCAGCTTAATGAA +
Preference number: 2 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLIRESY*VCQLNE
Trigger: TTCATTAAGCTGGCATACCCAATAGGATTCCCTGAT...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGGTCTGCATGACAGCGTaGCGTGCATGTGGCCCATCT +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKVCMTA*RACGPS
Trigger: AGATGGGCCACATGCACGCCACGCTGTCATGCAGAC...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGATGCCTTATTCACTTCTaGTTCAGTTCCGTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LGSGASLLGCESSLAPCGCLIHF*FSSVAL
Trigger: CAAAGCCACGGAACTGAACCAGAAGTGAATAAGGCA...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGAAAACAGAAATTGTTaGCAGCTACAGACCCAGAGA +
Preference number: 2 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCENRNC*QLQTQR
Trigger: TCTCTGGGTCTGTAGCTGTCAACAATTTCTGTTTTC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGACAGCTTACTGGGGTGTaGGTCTTCCTTAGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRQLTGV*VFLSSV
Trigger: CACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTG...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGGCTGTTAGGAGAAAGTaGAGGTGGGTGCCATGGATC +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKAVRRK*RWVPWI
Trigger: GATCCATGGCACCCACCTTCACTTTCTCCTAACAGC...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCTCAGTGACAGATCACTaGTGCTTTTCATCAGACCAA +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFSVTDH*CFSSDQ
Trigger: TTGGTCTGATGAAAAGCAGCAGTGATCTGTCACTGA...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCCGGTGTTTGCAGAATTaGTTCATTATGAGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFRCLQN*FIMSKA
Trigger: TGCCTTGCTCATAATGAACCAATTCTGCAAACACCG...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGGTGCCTGTGGGTATTTaGAAGCTGAAGGTAACCCCA +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKVPVGI*KLKVTP
Trigger: TGGGGTTACCTTCAGCTTTCAAATACCCACAGGCAC...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGAGCCTTGATCCAGAAGTaGCAGAGAATGCGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRALIQK*QRMRSV
Trigger: CACACTCCGCATTCTCTGTCACTTCTGGATCAAGGC...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGGTGCTGGGCACTGATTaGATGCTTTACAGGTGTCAC +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKVLGTD*MLYRCH
Trigger: GTGACACCTGTAAAGCATTCAATCAGTGCCCAGCAC...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGATTATTAAGTGTGTGCTaGGCACTGATTGAATGCTTT +
Preference number: 2 (lower is better)
Translates to: LGSGASLLGCESSLAPCGLLSVC*ALIECF
Trigger: AAAGCATTCAATCAGTGCCCAGCACACACTTAATAA...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp TTGGACCTCCTTGTAGCTTGCCCTGGGTGCAAAACGATCATCCTTTaGGGCAGAAAACAGAAATTGTTGACAGCTACAGACCCAGAGATT +
Preference number: 2 (lower is better)
Translates to: LDLLVACPGCKTIIL*GRKQKLLTATDPEI
Trigger: AATCTCTGGGTCTGTAGCTGTCAACAATTTCTGTTTTCTGCCCAAAAGGATGATCGTTTTGCACCCAGGGCAAGCTACAAGGAGGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGTCCTTTCCAGAAATGTaGGTCCCACCTTTCCAATTT +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKSFPEM*VPPFQF
Trigger: AAATTGGAAAGGTGGGACTCACATTTCTGGAAAGGA...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGAATGTTCCCATTACATTaGATAGCTCTGGCCACAGAG +
Preference number: 2 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRMFPLH*IALATE
Trigger: CTCTGTGGCCAGAGCTATGCAATGTAATGGGAACAT...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp TGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTaGCATGATGCAGCTCAAGTATTTCAAATCCTGTTTCATCTAGCA +
Preference number: 2 (lower is better)
Translates to: WFIMSKAASGFCLST*HDAAQVFQILFHLA
Trigger: TGCTAGATGAAACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGATTGGTGAAGGTTTGCTaGATGAATGAGGAACTGCTT +
Preference number: 2 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRLVKVC*MNEELL
Trigger: AAGCAGTTCCTCATTCATTCAGCAAACCTTCACCAA...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 90 bp TTGCAGAATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTaGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTTT +
Preference number: 2 (lower is better)
Translates to: LQNWFIMSKAASGFC*STLHDAAQVFQILF
Trigger: AAACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGGCCTCTAAAAGTATATaGTGTTCCCATTACATTGCA +
Preference number: 2 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKASKSI*CSHYIA
Trigger: TGCAATGTAATGGGAACATCATATACTTTTAGAGGC...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR GCA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATGAATCCTATTGGGTATaGCAGCTTAATGAAATACTT +
Preference number: 2 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHESYWV*QLNEIL
Trigger: AAGTATTTCATTAAGCTGGCATACCCAATAGGATTC...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp GGGCTCCCTCCCGCCTGGTCTGGCCTGTCTTCCTTCTaGTGCTATGCAGTTCATCCTGGGTCCCTGAGGGCC +
Preference number: 3 (lower is better)
Translates to: GLPPAWSGLSSF*CYAVHPGSLRA
Trigger: GGCCCTCAGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAAGACAGGCCAGACCAGGCGGGAGGGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp GGGTGGTGGAGGTCGCAATGCGCTGTCCCCACCACATaGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: GWWRSQCAVPTT*SLLASAPLCWL
Trigger: CAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTGGTGGGGACAGCGCATTGCGACCTCCACCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CTTGAGGTCTCACCGGGCAGACAGGCACGGAGTGAGTaGTCCACCATGGGCCTCCCTTCCTCCAGGTTGCAT +
Preference number: 3 (lower is better)
Translates to: LEVSPGRQARSE*STMGLPSSRLH
Trigger: ATGCAACCTGGAGGAAGGGAGGCCCATGGTGGAGCACTCACTCCGTGCCTGTCTGCCCGGTGAGACCTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp AGGCCTGGGCTCAGTCCAGCCAGCCCAACCTCTGATTaGTATCCTCAGAGCCCCTCCAGGGTCTCCTTGGCA +
Preference number: 3 (lower is better)
Translates to: RPGLSPASPTSD*YPQSPSRVSLA
Trigger: TGCCAAGGAGACCCTGGAGGGGCTCTGAGGATAGCAATCAGAGGTTGGGCTGGCTGGACTGAGCCCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp GGCACTCAGGGGCAGCAGCTCATTCCCAAAGTTCTCTaGTGGAGCTGGGGAGTGGCACCCTGGGAACTCTGG +
Preference number: 3 (lower is better)
Translates to: GTQGQQLIPKVL*WSWGVAPWELW
Trigger: CCAGAGTTCCCAGGGTGCCACTCCCCAGCTCCACCAGAGAACTTTGGGAATGAGCTGCTGCCCCTGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp TCGCAGGACCCCAGCTGGCAAGGTTTTGTTCCTCCCTaGAGGGTAGAGACCCTCACTGAGGCCCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SQDPSWQGFVPP*RVETLTEALER
Trigger: CCTCTCCAGGGCCTCAGTGAGGGTCTCTACCCTCCAGGGAGGAACAAAACCTTGCCAGCTGGGGTCCTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp CAACAGGCCTGGGCTCAGTCCAGCCAGCCCAACCTCTaGTTGCTATCCTCAGAGCCCCTCCAGGGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: QQAWAQSSQPNL*LLSSEPLQGLL
Trigger: AAGGAGACCCTGGAGGGGCTCTGAGGATAGCAATCAGAGGTTGGGCTGGCTGGACTGAGCCCAGGCCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp TCAGTCCTTTCCTGTGTGGATGGAGTGTTGGCACAGTaGGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: SVLSCVDGVLAQ*GGCCKWTRRGW
Trigger: CCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCACACAGGAAAGGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp GCGGTGTCCGGTGAACGGCTGCAATGCAGGTTAGGCTaGCACCATGAGGGAAGCTGGAGGGAGGACCTGTTA +
Preference number: 3 (lower is better)
Translates to: AVSGERLQCRLG*HHEGSWREDLL
Trigger: TAACAGGTCCTCCCTCCAGCTTCCCTCATGGTGGCAGCCTAACCTGCATTGCAGCCGTTCACCGGACACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp ACCACATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTaGCTGCAGCCTTGCTGCTCAGTGGGCGGTTGTGGA +
Preference number: 3 (lower is better)
Translates to: TTWSLLASAPLC*LQPCCSVGGCG
Trigger: TCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp TTCACTCAGGCACGTGGGCTGCCCTGCGGTGGGAGCTaGGAGAATGCAGTGGAGGTTGTTGGGAGGAACTCA +
Preference number: 3 (lower is better)
Translates to: FTQARGLPCGGS*ENAVEVVGRNS
Trigger: TGAGTTCCTCCCAACAACCTCCACTGCATTCTCTCAGCTCCCACCGCAGGGCAGCCCACGTGCCTGAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CATGGAGCTTGCTTGCCTCCGCACCTCTTTGCTGGCTaGAGCCTTGCTGCTCAGTGGGCGGTTGTGGAAAGA +
Preference number: 3 (lower is better)
Translates to: HGACLPPHLFAG*SLAAQWAVVER
Trigger: TCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp CCACCCCCACGTCTGCATGACAGCGTGGCGTGCATGTaGCCCATCTGGGGATCAGGGAATCCTATTGGGTAT +
Preference number: 3 (lower is better)
Translates to: PPPRLHDSVACM*PIWGSGNPIGY
Trigger: ATACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp GAGAGAGGGGTCAGACTAGAACCTATGGAGACTTGGTaGGCAACAGGCCTGGGCTCAGTCCAGCCAGCCCAA +
Preference number: 3 (lower is better)
Translates to: ERGVRLEPMETW*ATGLGSVQPAQ
Trigger: TTGGGCTGGCTGGACTGAGCCCAGGCCTGTTGCCCACCAAGTCTCCATAGGTTCTAGTCTGACCCCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp TACACCTCGTCTATATTTCCCACCCCCACGTCTGCATaGCAGCGTGGCGTGCATGTGGCCCATCTGGGGATC +
Preference number: 3 (lower is better)
Translates to: YTSSIFPTPTSA*QRGVHVAHLGI
Trigger: GATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp AGGAACTCACCCGCCTGCTCTGGCTGTCTGAGCAGGTaGGGGATAGTGATATCAAGTGCGAAGACCAGGCCC +
Preference number: 3 (lower is better)
Translates to: RNSPACSGCLSR*GIVISSAKTRP
Trigger: GGGCCTGGTCTTCGCACTTGATATCACTATCCCTCACCTGCTCAGACAGCCAGAGCAGGCGGGTGAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTaGATGACAGCGTGGCGTGCATGTGGCCCATCTGGG +
Preference number: 3 (lower is better)
Translates to: LLHLVYISHPHV*MTAWRACGPSG
Trigger: CCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTTGCTaGTCAGTGGGCGGTTGTGGAAAGAATCGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: LASAPLCWLQPC*SVGGCGKNRFS
Trigger: TGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp CCGCACCTCTTTGCTGGCTGCAGCCTTGCTGCTCAGTaGGCGGTTGTGGAAAGAATCGGTTCTCAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: PHLFAGCSLAAQ*AVVERIGSQFP
Trigger: TGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp AAGCTGGAGGGAGGACCTGTTAACCTCATGGTACTGTaGCGACATCAGCCACCACTACGTGTCACGGGGTGG +
Preference number: 3 (lower is better)
Translates to: KLEGGPVNLMVL*RHQPPLRVTGW
Trigger: CCACCCCGTGACACGTAGTGGTGGCTGATGTCGCCACAGTACCATGAGGTTAACAGGTCCTCCCTCCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp GGGTTGTTTACTCCTCCCACAGTCTTGGATGGGTTTTaGGGGTCTGGTGCGGTGTCCGGTGAACGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: GLFTPPTVLDGF*GSGAVSGERLQ
Trigger: TTGCAGCCGTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAGTAAACAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CCCAGCTCCCATCCTCAGGAAACCCTGAGCCCTGCCTaGATCCTTTCCAGAAATGTGAGTCCCACCTTTCCA +
Preference number: 3 (lower is better)
Translates to: PSSHPQETLSPA*ILSRNVSPTFP
Trigger: TGGAAAGGTGGGACTCACATTTCTGGAAAGGATGCAGGCAGGGCTCAGGGTTTCCTGAGGATGGGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CGGGAACACAAGAGCCAACAACCCATGGCCTTTGTCTaGAAGGAACTTGAGGTCTCACCGGGCAGACAGGCA +
Preference number: 3 (lower is better)
Translates to: REHKSQQPMAFV*KELEVSPGRQA
Trigger: TGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCTTGTGTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp CTTGCTCTAGTGGCAGGGCTAGCAGAGTGCACTGTCTaGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCC +
Preference number: 3 (lower is better)
Translates to: LALVAGLAECTV*GFPLELYFCSS
Trigger: GGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGCACTCTGCTAGCCCTGCCACTAGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp CGTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTaGGGATCAGGGAATCCTATTGGGTATGCCAGCTTA +
Preference number: 3 (lower is better)
Translates to: RLHDSVACMWPI*GSGNPIGYASL
Trigger: TAAGCTGGCATACCCAATAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp TCCAGTCTTTGGTGTCCAGGTACAGTCTCCAGGCCGTaGCTTCTCGAGTTCTGTATGTGGGTTGCTGCTCCG +
Preference number: 3 (lower is better)
Translates to: SSLWCPGTVSRP*LLEFCMWVAAP
Trigger: CGGAGCAGCAACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAAAGACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCCATTCCCTAAAGACCTaGCCCTCAAGTCAACCAAGG +
Preference number: 3 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLHSLKT*PSSQPR
Trigger: CCTTGGTTGACTTGAGGGCAAGGTCTTTAGGGAATG...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTAGCACAGGTAAGCCCTaGGGTTCTGGAGCCAGCTTA +
Preference number: 3 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCSTGKP*GSGASL
Trigger: TAAGCTGGCTCCAGAACCCAAGGGCTTACCTGTGCT...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp GATATCAAGTGCGAAGACCAGGCCCTGAAGCCAGCCTaGCGGTTCCAGCTGTTAGGAGAAAGTGAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: DIKCEDQALKPA*RFQLLGESEGG
Trigger: CCCACCTTCACTTTCTCCTAACAGCTGGAACCGTCAGGCTGGCTTCAGGGCCTGGTCTTCGCACTTGATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp TTGCATCCAGGACTATGCTGTCTAGCGTGTCTGCTGTaGCTTCCTCATGGCAGAGCCCCACACTGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: LHPGLCCLACLL*LPHGRAPHCGC
Trigger: ACAGCCACAGTGTGGGGCTCTGCCATGAGGAAGTCACAGCAGACACGCTAGACAGCATAGTCCTGGATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp ACACTCTCCCCTTCTCAGCATGGCGTGGCAAATAGCTaGTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: TLSPSQHGVANS*CPCSPRKSSCP
Trigger: AGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCTATTTGCCACGCCATGCTGAGAAGGGGAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp AGTGGAGGTTGTTGGGAGGAACTCACCCGCCTGCTCTaGCTGTCTGAGCAGGTGAGGGATAGTGATATCAAG +
Preference number: 3 (lower is better)
Translates to: SGGCWEELTRLL*LSEQVRDSDIK
Trigger: CTTGATATCACTATCCCTCACCTGCTCAGACAGCCAGAGCAGGCGGGTGAGTTCCTCCCAACAACCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp TTGCTGGCTGCAGCCTTGCTGCTCAGTGGGCGGTTGTaGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: LLAAALLLSGRL*KESVLSSHSSS
Trigger: AGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp CATGAGGGAAGCTGGAGGGAGGACCTGTTAACCTCATaGTACTGTGGCGACATCAGCCACCACTACGTGTCA +
Preference number: 3 (lower is better)
Translates to: HEGSWREDLLTS*YCGDISHHYVS
Trigger: TGACACGTAGTGGTGGCTGATGTCGCCACAGTACCATGAGGTTAACAGGTCCTCCCTCCAGCTTCCCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp TTAACTGGGCTGGGTTGTTTACTCCTCCCACAGTCTTaGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTG +
Preference number: 3 (lower is better)
Translates to: LTGLGCLLLPQS*MGFEGLVRCPV
Trigger: CACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAGTAAACAACCCAGCCCAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCAGAATGCAGTGGAGGTaGTTGGGAGGAACTCACCCG +
Preference number: 3 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFRMQWR*LGGTHP
Trigger: CGGGTGAGTTCCTCCCAACAACCTCCACTGCATTCT...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp CTTCCTTCTGCTGCTATGCAGTTCATCCTGGGTCCCTaGGGGCCTCGCAGATGCTTCACTCGAAAGATTGGA +
Preference number: 3 (lower is better)
Translates to: LPSAAMQFILGP*GPRRCFTRKIG
Trigger: TCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp GACATCAGCCACCACTACGTGTCACGGGGTGGATGCTaGGGAAGAGAAAACAGAGCAGAGCTGGAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: DISHHYVSRGGC*GRENRAELEKF
Trigger: GAACTTCTCCAGCTCTGCTCTGTTTTCTCTTCCTCAGCATCCACCCCGTGACACGTAGTGGTGGCTGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTGCTaGTCCGTAATGCATAGTTGGGGGACCATTTTGGTC +
Preference number: 3 (lower is better)
Translates to: QAVASRVLYVGC*SVMHSWGTILV
Trigger: GACCAAAATGGTCCCCCAACTATGCATTACGGAGCAGCAACCCACATACAGAACTCGAGAAGCCACGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTaGTGCTCCGTAATGCATAGTTGGGGGACCATTTTG +
Preference number: 3 (lower is better)
Translates to: LQAVASRVLYVG*CSVMHSWGTIL
Trigger: CAAAATGGTCCCCCAACTATGCATTACGGAGCAGCAACCCACATACAGAACTCGAGAAGCCACGGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp CATTGGTGTGTGACTCACCCTGAGCGAAATAACTGCTaGGCTGAGTTCTTACACAAACCCCCACCCCATCCC +
Preference number: 3 (lower is better)
Translates to: HWCVTHPERNNC*AEFLHKPPPHP
Trigger: GGGATGGGGTGGGGGTTTGTGTAAGAACTCAGCCCAGCAGTTATTTCGCTCAGGGTGAGTCACACACCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCGGCAGAAAACAGAAATaGTTGACAGCTACAGACCCA +
Preference number: 3 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPGRKQK*LTATDP
Trigger: TGGGTCTGTAGCTGTCAACAATTTCTGTTTTCTGCC...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTTGCACTCCTGAATGCTaGACTTTCCTGAGTGCAAGG +
Preference number: 3 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCCTPEC*TFLSAR
Trigger: CCTTGCACTCAGGAAAGTCAAGCATTCAGGAGTGCA...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp GTGGAAAGAATCGGTTCTCAGTTCCCATTCCAGCTCTaGTATTTAGACACCGGGAGACCTGGAAACAGCCCC +
Preference number: 3 (lower is better)
Translates to: VERIGSQFPFQL*YLDTGRPGNSP
Trigger: GGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAGCAGAGCTGGAATGGGAACTGAGAACCGATTCTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp GAGTCCCTTATTTGGAAGGAATTCCCCCACCCCCATTaGTGTGTGACTCACCCTGAGCGAAATAACTGCTGG +
Preference number: 3 (lower is better)
Translates to: ESLIWKEFPHPH*CVTHPERNNCW
Trigger: CCAGCAGTTATTTCGCTCAGGGTGAGTCACACACCAATGGGGGTGGGGGAATTCCTTCCAAATAAGGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp ACTATGCTGTCTAGCGTGTCTGCTGTGACTTCCTCATaGCAGAGCCCCACACTGTGGCTGTTTATGGAGCAT +
Preference number: 3 (lower is better)
Translates to: TMLSSVSAVTSS*QSPTLWLFMEH
Trigger: ATGCTCCATAAACAGCCACAGTGTGGGGCTCTGCCATGAGGAAGTCACAGCAGACACGCTAGACAGCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp GTTAAGCATCACGTTCTCAGTCCTTTCCTGTGTGGATaGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTG +
Preference number: 3 (lower is better)
Translates to: VKHHVLSPFLCG*SVGTVRRVLQV
Trigger: CACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCACACAGGAAAGGACTGAGAACGTGATGCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGATGTTCCCATTACATaGCATAGCTCTGGCCACAGA +
Preference number: 3 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFDVPIT*HSSGHR
Trigger: TCTGTGGCCAGAGCTATGCAATGTAATGGGAACATC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCTTTGCTTCATCCCTATaGGAGAGGAAGCTTCCCACA +
Preference number: 3 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCFASSL*ERKLPT
Trigger: TGTGGGAAGCTTCCTCTCCAATAGGGATGAAGCAAA...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGAAAATCCCCTCCCTGTaGCCTACCAGGTCCGTGGCT +
Preference number: 3 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKKIPSL*PTRSVA
Trigger: AGCCACGGACCTGGTAGGCAACAGGGAGGGGATTTT...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp TCAGGCTTTCCTAAGCCCCGCGTGCCTGTGGGTATTTaGAAGCTGAAGGTAACCCCAAGCTACCACAAATGT +
Preference number: 3 (lower is better)
Translates to: SGFPKPRVPVGI*KLKVTPSYHKC
Trigger: ACATTTGTGGTAGCTTGGGGTTACCTTCAGCTTTCAAATACCCACAGGCACGCGGGGCTTAGGAAAGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp TTATTTGGAAGGAATTCCCCCACCCCCATTGGTGTGTaGCTCACCCTGAGCGAAATAACTGCTGGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: LFGRNSPTPIGV*LTLSEITAGLS
Trigger: ACTCAGCCCAGCAGTTATTTCGCTCAGGGTGAGTCACACACCAATGGGGGTGGGGGAATTCCTTCCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp TGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTaGCTCCTAACGAGTCCCTTATTTGGAAGGAATTCC +
Preference number: 3 (lower is better)
Translates to: CSPRKSSCPWRT*LLTSPLFGRNS
Trigger: GGAATTCCTTCCAAATAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp GTCTCGGATGGGCAGAGCTTAACTGCCTTAAAAACTTaGTACAGGGCAAGGTGTGAGTTTCCCGGTGAGACT +
Preference number: 3 (lower is better)
Translates to: VSDGQSLTALKT*YRARCEFPGET
Trigger: AGTCTCACCGGGAAACTCACACCTTGCCCTGTACCAAGTTTTTAAGGCAGTTAAGCTCTGCCCATCCGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACAAAACGATCATCCTTTaGGGCAGAAAACAGAAATTG +
Preference number: 3 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNKTIIL*GRKQKL
Trigger: CAATTTCTGTTTTCTGCCCAAAAGGATGATCGTTTT...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGGGACCTCCTTGTAGCTaGCCCTGGGTGCAAAACGAT +
Preference number: 3 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKGPPCS*PWVQND
Trigger: ATCGTTTTGCACCCAGGGCAAGCTACAAGGAGGTCC...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp TTTGCCTTATTCACTTCTGGTTCAGTTCCGTGGCTTTaGACAGATCTGGCACAAGGTGGGTGCTTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: FALFTSGSVPWL*TDLAQGGCLVK
Trigger: CTTCACCAAGCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAATAAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp ACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTaGTCTACACGTTTCTGTAGTGACCGTCCATTTGAA +
Preference number: 3 (lower is better)
Translates to: TGRPGNSPLTKS*STRFCSDRPFE
Trigger: TTCAAATGGACGGTCACTACAGAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp GGCACTCAACAGGCAAGGCCACTTAACAAGAGAATGTaGGCCCAGCTGGAGGAGAGAGAAAAATACAATGAC +
Preference number: 3 (lower is better)
Translates to: GTQQARPLNKRM*AQLEEREKYND
Trigger: GTCATTGTATTTTTCTCTCTCCTCCAGCTGGGCTCACATTCTCTTGTTAAGTGGCCTTGCCTGTTGAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGACGTGCCTGTGGGTATTaGAAAGCTGAAGGTAACCCC +
Preference number: 3 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRRACGY*KAEGNP
Trigger: GGGGTTACCTTCAGCTTTCAAATACCCACAGGCACG...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGAGTTGGGGGACCATTTaGGTCAGTGACAGATCACTG +
Preference number: 3 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKSWGTI*VSDRSL
Trigger: CAGTGATCTGTCACTGACCAAAATGGTCCCCCAACT...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp CAAGTATTTCAAATCCTGTTTCATCTAGCAAAGGCTTaGTCTAGTGGCAGGGCTAGCAGAGTGCACTGTCTG +
Preference number: 3 (lower is better)
Translates to: QVFQILFHLAKA*SSGRASRVHCL
Trigger: CAGACAGTGCACTCTGCTAGCCCTGCCACTAGAGCAAGCCTTTGCTAGATGAAACAGGATTTGAAATACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp AAACGATCATCCTTTTGGGCAGAAAACAGAAATTGTTaGCAGCTACAGACCCAGAGATTCGAGTCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: KRSSFWAENRNC*QLQTQRFESAR
Trigger: CCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTCTGTTTTCTGCCCAAAAGGATGATCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp ATCTCCCATTATACTAACCCTGCCTATTGGACCTTCTaGTGCAAGGAGCAGATTAAAATCCCCTCCCTGTTG +
Preference number: 3 (lower is better)
Translates to: ISHYTNPAYWTF*CKEQIKIPSLL
Trigger: CAACAGGGAGGGGATTTTAATCTGCTCCTTGCATCAGAAGGTCCAATAGGCAGGGTTAGTATAATGGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGTTTTGCTTGTCAACCTaGCATGATGCAGCTCAAGTA +
Preference number: 3 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKFCLST*HDAAQV
Trigger: TACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAA...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR-3UTR CAA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGATCGGTGTTTGCAGAATaGGTTCATTATGAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRSVFAE*VHYEQG
Trigger: GCCTTGCTCATAATGAACCAATTCTGCAAACACCGA...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR TCA 72 bp CAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATaGTGCAGCTCAAGTATTTCAAATCCTGTTTCATCT +
Preference number: 3 (lower is better)
Translates to: QGSQWVLLVNLA*CSSSISNPVSS
Trigger: AGATGAAACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CCA 72 bp ACTGTGAACTTTCCCGTTTTCTACAAGAAGAAACTGTaGCACGGAGAGATTCAGTTACTTGTCCAGGATCAC +
Preference number: 3 (lower is better)
Translates to: TVNFPVFYKKKL*HGEIQLLVQDH
Trigger: GTGATCCTGGACAAGTAACTGAATCTCTCCGTGCCACAGTTTCTTCTTGTAGAAAACGGGAAAGTTCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR GCA 72 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTaGTTGTCAACCTTGCATGATGCAGCTCAAGTATTT +
Preference number: 3 (lower is better)
Translates to: NWFIMSKAASGF*LSTLHDAAQVF
Trigger: AAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp CTGTGTGGATGGAGTGTTGGCACAGTGAGGCGGGTGTaGCAAGTGGACGCGTCGGGGGTGGTCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: LCGWSVGTVRRV*QVDASGVVCTG
Trigger: GCCCGTGCAGACCACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCACACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGGCTCCGTGTGGATGGTaGGCCCTCCTCTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLAPCGW*ALLSQV
Trigger: GACCTGAGAGAGGAGGGCTCACCATCCACACGGAGC...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCCGAGGGAGCTGCAGCTaGAGGTGGGCGTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLRGSCS*RWASCP
Trigger: GGGGCAGGACGCCCACCTCCAGCTGCAGCTCCCTCG...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGAACCAGGGGGAGGCTaGCCCTGGGAGATGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNEPGGG*PWEMPS
Trigger: GGAAGGCATCTCCCAGGGGCAGCCTCCCCCTGGTTC...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTCATGACAGCGTGGCGTaGATGTGGCCCATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGHDSVA*MWPIWG
Trigger: TCCCCAGATGGGCCACATGCACGCCACGCTGTCATG...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTAGGAACTCACCCGCCTaGTCTGGCTGTCTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGRNSPA*SGCLSR
Trigger: CCTGCTCAGACAGCCAGAGCAGGCGGGTGAGTTCCT...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGCGAGAAGCAGAGGGCTaGTATCATGCTGCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLREAEG*YHAAAV
Trigger: CACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCG...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGACACCAGGGCAAGCCTaGGTCTTGCCCACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLTPGQA*VLPTSV
Trigger: AACAGAGGTGGGCAAGACCCAGGCTTGCCCTGGTGT...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGGGTCTGGGATCATGGTaGCCATGTAGATCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLGLGSW*PCRSLP
Trigger: AGGGAGGGATCTACATGGTCACCATGATCCCAGACC...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTCAGGCAACCTGGATCTaGTACCCTGAACCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGQATWI*YPEPGG
Trigger: TCCCCCTGGTTCAGGGTAGCAGATCCAGGTTGCCTG...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGACAGCTGGCAGCCCACTaGAGGGGTGGTGGAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGQLAAH*RGGGGR
Trigger: GCGACCTCCACCACCCCTGCAGTGGGCTGCCAGCTG...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAAGCGTGGCGTGCATGTaGCCCATCTGGGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGSVACM*PIWGSG
Trigger: CCCTGATCCCCAGATGGGCCACATGCACGCCACGCT...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTCAGCTTACTGGGGTGTaGGTCTTCCTTAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGQLTGV*VFLSSV
Trigger: CACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTG...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGGCGTGGCAAATAGCTaGTGCCCTTGTTCACCGAGA +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGGVANS*CPCSPR
Trigger: TCTCGGTGAACAAGGGCAGCAGCTATTTGCCACGCC...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTAATCCAAGGGGACTGCTaGCTTGACCACCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VCMTAWRACGPSGDQGILIQGDC*LDHQSP
Trigger: GGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGAT...TAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGACCTCCACTTCCTGTCTaGCCATGGCTTCGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGPPLPV*PWLRGL
Trigger: AAGGCCGCGAAGCCATGGGCAGACAGGAAGTGGAGG...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTCTGCACGGGCTGGCCTaGATAGCCCAGGGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCLHGLA*IAQGWR
Trigger: TCTCCACCCCTGGGCTATGCAGGCCAGCCCGTGCAG...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCAGAGGGCTGGTATCATaGTGCAGCCGTGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLRGLVS*CSRGGT
Trigger: TGTCCCACCACGGCTGCAGCATGATACCAGCCCTCT...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTAAGCCTCCAGGGATGTaGCTTCTTCTACGCGAACCA +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGKPPGM*LLLREP
Trigger: TGGTTCGCGTAGAAGAAGGCACATCCCTGGAGGCTT...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTCCCACCCCCACGTCTaGATGACAGCGTGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGSHPHV*MTAWRA
Trigger: TGCACGCCACGCTGTCATGCAGACGTGGGGGTGGGA...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCCCGAGAAAATCCTCCTaGCCTTGGCGTACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPPRKSS*PWRTWL
Trigger: GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGG...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTAGTGGCTTCTTCTCCTTaGCAGCCCTACCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: VCMTAWRACGPSGDQGILVASSP*QPYQGI
Trigger: GATGCCCTGGTAGGGCTGGCAAGGAGAAGAAGCCAC...TAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGACAGCATCTGGATGCCTaGGAAGGAGACCCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGQHLDA*EGDPVD
Trigger: GTCAACAGGGTCTCCTTCTCAGGCATCCAGATGCTG...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCACCCCCACGTCTGCATaGCAGCGTGGCGTGCATGTG +
Preference number: 4 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCTPTSA*QRGVHV
Trigger: CACATGCACGCCACGCTGTCATGCAGACGTGGGGGT...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCGTGCTCAGGGGGACCTaGTCCAGGTACCTCAGCGTC +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGVLRGT*SRYLSV
Trigger: GACGCTGAGGTACCTGGAGCAGGTCCCCCTGAGCAC...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCGCTGCCCCTGGGAGATaGCTTCCCATTCGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPAAPGR*LPIRQF
Trigger: AAACTGACGAATGGGAAGGCATCTCCCAGGGGCAGC...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGGGCTGTGCCCTTGGTaGCTCAGATTCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCGLCPW*LRFPGE
Trigger: CTCTCCAGGGAATCTGAGGCACCAAGGGCACAGCCC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGTGTTTATGGAGCATTTaGAAGTCTCCCTCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLCLWSI*KSPSRG
Trigger: TCCCCTCGAGGGAGACTTGCAAATGCTCCATAAACA...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAAGCCCAACCTCTGATTaGTATCCTCAGAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGSPTSD*YPQSPS
Trigger: GGAGGGGCTCTGAGGATAGCAATCAGAGGTTGGGCT...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GCACTGTCTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTTGGCTGCAGCCTTGCTaGTCAGTGGGCGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALSGGSLWSCISVPPPGLWLQPC*SVGGCG
Trigger: TCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCA...AAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCATCATGCTGCAGCCGTaGTGGGACATTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLIMLQP*WDIGKG
Trigger: GCCTTTGCCAATGTCCCACCACGGCTGCAGCATGAT...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTTCCTCCTCCAGGTCTTaGCTGGAGAGGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCSSSRS*LERAVP
Trigger: TGGGACAGCCCTCTCCAGCCAAGACCTGGAGGAGGA...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCTTCCTTAGCTCCGTGTaGATGGTGAGCCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLFLSSV*MVSPPL
Trigger: GAGAGGAGGGCTCACCATCCACACGGAGCTAAGGAA...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp GCCACCGGGAACACAAGAGCCAACAACCCATGGCCTTaGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ATGNTRANNPWP*SARNLRSHRAD
Trigger: GTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCTTGTGTTCCCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp CTTGCTTGCCTCCGCACCTCTTTGCTGGCTGCAGCCTaGCTGCTCAGTGGGCGGTTGTGGAAAGAATCGGTT +
Preference number: 4 (lower is better)
Translates to: LACLRTSLLAAA*LLSGRLWKESV
Trigger: AACCGATTCTTTCCACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGCAAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCTCACTCGCAGGACGGTaGGGGGCTTCTCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGSLAGR*GASPWK
Trigger: CTTCCATGGAGAAGCCCCTCACCGTCCTGCGAGTGA...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATGGCTCCAGGGACAGGTaGCGGCGGGAGAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHGSRDR*RRERRG
Trigger: CCCTCGCCTCTCCCGCCGTCACCTGTCCCTGGAGCC...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCAGAAGGAGACCCTGTTaGCGGTGCTCAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGRRRPC*RCSGGP
Trigger: AGGTCCCCCTGAGCACCGTCAACAGGGTCTCCTTCT...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCGCCTTGATCCAGAAGTaGCAGAGAATGCGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLALIQK*QRMRSV
Trigger: CACACTCCGCATTCTCTGTCACTTCTGGATCAAGGC...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGAGGGCTGGTATCATGCTaGAGCCGTGGTGGGACATTG +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGGLVSC*SRGGTL
Trigger: CAATGTCCCACCACGGCTGCAGCATGATACCAGCCC...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCAGGCCAGCAGGGCACTaGCTTTCTCCAGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGRPAGH*LSPGRA
Trigger: AGCCCTACCTGGAGAAAGGCAGTGCCCTGCTGGCCT...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCCATCTAGCAAAGGCTTaGTCTAGTGGCAGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLHLAKA*SSGRAS
Trigger: GCTAGCCCTGCCACTAGAGCAAGCCTTTGCTAGATG...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGAACCCTGAGCCCTGCCTaGATCCTTTCCAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGTLSPA*ILSRNV
Trigger: CACATTTCTGGAAAGGATGCAGGCAGGGCTCAGGGT...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCGTGGAGGAATTGAACTaGCCCCTCTCGCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGVEELN*PLSQDP
Trigger: GGGGTCCTGCGAGAGGGGGCAGTTCAATTCCTCCAC...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATCTCAGGCACGTGGGCTaGCCTGCGGTGGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHLRHVG*PAVGAE
Trigger: CTCAGCTCCCACCGCAGGGCAGCCCACGTGCCTGAG...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTTTCCCATTCCAGCTCTaGTATTTAGACACCGGGAGA +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGFPFQL*YLDTGR
Trigger: TCTCCCGGTGTCTAAATAGCAGAGCTGGAATGGGAA...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCTGCTGGCTGCAGCCTTaGTGCTCAGTGGGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFCWLQP*CSVGGC
Trigger: ACAACCGCCCACTGAGCAGCAAGGCTGCAGCCAGCA...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCTGGTGGAGGTCGCAATaGGCTGTCCCCACCACATGG +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGWWRSQ*AVPTTW
Trigger: CCATGTGGTGGGGACAGCGCATTGCGACCTCCACCA...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GCACTGTCTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTCTGGGAGGGCTCCTATaGCTGCAGTTCAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: ALSGGSLWSCISVPPPGLLGGLL*LQFRNV
Trigger: CACGTTCCTGAACTGCAGCCATAGGAGCCCTCCCAG...AAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTACAGGGCTGTGCCCTTaGTGCCTCAGATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGTGLCP*CLRFPG
Trigger: TCCAGGGAATCTGAGGCACCAAGGGCACAGCCCTGT...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp AGAGCCAACAACCCATGGCCTTTGTCTGCAAGGAACTaGAGGTCTCACCGGGCAGACAGGCACGGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RANNPWPLSARN*RSHRADRHGVS
Trigger: ACTCACTCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGGTTGTTGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCGAGGGCTCCTATGGCTaGAGTTCAGGAACGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCEGSYG*SSGTWQ
Trigger: CTGCCACGTTCCTGAACTGCAGCCATAGGAGCCCTC...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCCTGTCTTCCTTCTGCTaGTATGCAGTTCATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPLSSFC*YAVHPG
Trigger: CCCAGGATGAACTGCATAGCAGCAGAAGGAAGACAG...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGCACCTCTTTGCTGGCTaGAGCCTTGCTGCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGHLFAG*SLAAQW
Trigger: CCACTGAGCAGCAAGGCTGCAGCCAGCAAAGAGGTG...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGACCACCACATGGAGCTTaGTTGCCTCCGCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGPPHGA*LPPHLF
Trigger: AAAGAGGTGCGGAGGCAAGCAAGCTCCATGTGGTGG...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GCACTGTCTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTATGCTGCAGCCGTGGTaGGACATTGGCAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ALSGGSLWSCISVPPPGLMLQPW*DIGKGR
Trigger: TCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCAT...AAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGTGCCTCAGATTCCCTaGAGAGTGGGGTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFVPQIP*RVGSGI
Trigger: GATCCCAGACCCCACTCTCCAGGGAATCTGAGGCAC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCCCTTGTAGCTTGCCCTaGGTGCAAAACGATCATCCT +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPPCSLP*VQNDHP
Trigger: AGGATGATCGTTTTGCACCCAGGGCAAGCTACAAGG...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTAAATGAGGAACTGCTTTaGGGGTCCCAAGGGGTCATT +
Preference number: 4 (lower is better)
Translates to: VCMTAWRACGPSGDQGILNEELL*GSQGVI
Trigger: AATGACCCCTTGGGACCCCCAAAGCAGTTCCTCATT...TAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTTGCCTTATTCACTTCTaGTTCAGTTCCGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGCLIHF*FSSVAL
Trigger: CAAAGCCACGGAACTGAACCAGAAGTGAATAAGGCA...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp CTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTaGGCGTACCTGGCTCCTAACGAGTCCCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LLPLFTEKILLP*AYLAPNESLIW
Trigger: CCAAATAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp TCCCTAGTTGGGGAATCACAGAGCACAGGTAAGCCCTaGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLVGESQSTGKP*GSGASLLGCES
Trigger: AGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAAGGGCTTACCTGTGCTCTGTGATTCCCCAACTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGCTGGATCTGCTACCCTaGACCAGGGGGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKLDLLP*TRGRLP
Trigger: GGGCAGCCTCCCCCTGGTTCAGGGTAGCAGATCCAG...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTAAGTCAACCAAGGCCTTaGTCCAGAAGTGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VCMTAWRACGPSGDQGILSQPRP*SRSDRE
Trigger: TTCTCTGTCACTTCTGGATCAAGGCCTTGGTTGACT...TAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTACCCCCATTGGTGTGTaGCTCACCCTGAGCGAAATA +
Preference number: 4 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGTPIGV*LTLSEI
Trigger: TATTTCGCTCAGGGTGAGTCACACACCAATGGGGGT...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGATGCTCAGGGCCTGTaGGTGAAGTTGGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFDAQGL*VKLDLL
Trigger: AAGGAGGTCCAACTTCACTCACAGGCCCTGAGCATC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACGCAGCCAGTGGGTTTTaGTTGTCAACCTTGCATGAT +
Preference number: 4 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNAASGF*LSTLHD
Trigger: ATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGC...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGACCTGAGCGAAATAACTaGTGGGCTGAGTTCTTACAC +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGPERNN*WAEFLH
Trigger: GTGTAAGAACTCAGCCCAGCAGTTATTTCGCTCAGG...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCGTGGCAAATAGCTGCTaGCCTTGTTCACCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPVANSC*PCSPRK
Trigger: TTTTCTCGGTGAACAAGGGCAGCAGCTATTTGCCAC...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTCCCTTCCTCCAGGTTaGATCCAGGACTATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGSLPPG*IQDYAV
Trigger: GACAGCATAGTCCTGGATGCAACCTGGAGGAAGGGA...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATCAGGCACGGAGTGAGTaGTCCACCATGGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHQARSE*STMGLP
Trigger: AGGGAGGCCCATGGTGGAGCACTCACTCCGTGCCTG...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCAGTATCCAAGGGGACTaGTGCCTTGACCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCSIQGD*CLDHQS
Trigger: GCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACT...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATGCCTCCGCACCTCTTTaGTGGCTGCAGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHASAPL*WLQPCC
Trigger: GCAGCAAGGCTGCAGCCAGCAAAGAGGTGCGGAGGC...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCCACATGGAGCTTGCTTaGCTCCGCACCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGHMELA*LRTSLL
Trigger: CAGCAAAGAGGTGCGGAGGCAAGCAAGCTCCATGTG...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGGTGAACGGCTGCAATaGAGGTTAGGCTGCCACCAT +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGGERLQ*RLGCHH
Trigger: ATGGTGGCAGCCTAACCTGCATTGCAGCCGTTCACC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCATTGGCAAAGGCAGATaGGCCCAGCGTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFIGKGR*AQRGMV
Trigger: TACCATCCCACGCTGGGCCCATCTGCCTTTGCCAAT...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCTGCCCTTGGCGTACCTaGCTCCTAACGAGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGCPWRT*LLTSPL
Trigger: TAAGGGACTCGTTAGGAGCCAGGTACGCCAAGGGCA...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACTCTGTAAATCAGGGGTaGAGGGCTGACATGGAAATA +
Preference number: 4 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNSVNQG*RADMEI
Trigger: TATTTCCATGTCAGCCCTTCACCCCTGATTTACAGA...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGACCTGCCTTGTGGCTGTaGTCTGAGTGTTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGPALWL*SECFCF
Trigger: GAAGCAAAAACACTCAGATCACAGCCACAAGGCAGG...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGTGTGTGCTGGGCACTaGTTGAATGCTTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCVCAGH*LNALQV
Trigger: CACCTGTAAAGCATTCAATCAGTGCCCAGCACACAC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCGGAAGAAGTCCTTATTaGCGGGGCACATCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGGRSPY*RGTSGS
Trigger: AGAGCCAGATGTGCCCCGGCAATAAGGACTTCTTCC...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATTGGAGGTGGGCGTCCTaGCCCCGTCCGAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHWRWAS*PRPRSR
Trigger: TCTGCTTCTCGGACGGGGGCAGGACGCCCACCTCCA...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCATGTTCCCATTACATTaGATAGCTCTGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLMFPLH*IALATE
Trigger: CTCTGTGGCCAGAGCTATGCAATGTAATGGGAACAT...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCTTCCTAAGCCCCGCGTaGCTGTGGGTATTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFFLSPA*LWVFES
Trigger: GCTTTCAAATACCCACAGGCACGCGGGGCTTAGGAA...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCGACCTCCTTGTAGCTTaGCCTGGGTGCAAAACGATC +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGDLLVA*PGCKTI
Trigger: GATCGTTTTGCACCCAGGGCAAGCTACAAGGAGGTC...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGAGTCCATGTGCCTACATaGATTCAGTTCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGVHVPT*IQFLPP
Trigger: TGGTGGGAGGAACTGAATGCATGTAGGCACATGGAC...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGTGTCCACGCATTCCTaGTGCAACCTCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFVSTHS*CNLKLL
Trigger: CAGGAGTTTGAGGTTGCACCAGGAATGCGTGGACAC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GCACTGTCTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTTGCATGTGGCCCATCTaGGGATCAGGGAATCCTATT +
Preference number: 4 (lower is better)
Translates to: ALSGGSLWSCISVPPPGLCMWPI*GSGNPI
Trigger: AATAGGATTCCCTGATCCCCAGATGGGCCACATGCA...AAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTAACGAGTCCCTTATTTaGAAGGAATTCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCNESLI*KEFPHP
Trigger: GGGGTGGGGGAATTCCTTCCAAATAAGGGACTCGTT...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCCTTCTCAGCATGGCGTaGCAAATAGCTGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFLLSMA*QIAAAL
Trigger: AAGGGCAGCAGCTATTTGCCACGCCATGCTGAGAAG...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGTGCCTGTGGGTATTTaGAAGCTGAAGGTAACCCCA +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGVPVGI*KLKVTP
Trigger: TGGGGTTACCTTCAGCTTTCAAATACCCACAGGCAC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GTCTGCATGACAGCGTGGCGTGCATGTGGCCCATCTGGGGATCAGGGAATCCTAGAAAACAGAAATTGTTaGCAGCTACAGACCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VCMTAWRACGPSGDQGILENRNC*QLQTQR
Trigger: TCTCTGGGTCTGTAGCTGTCAACAATTTCTGTTTTC...TAGGATTCCCTGATCCCCAGATGGGCCACATGCACGCCACGCTGTCATGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCGGTTTGCTGAATGAATaGGGAACTGCTTTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGGLLNE*GTALGV
Trigger: GACCCCCAAAGCAGTTCCTCATTCATTCAGCAAACC...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCCTTAACAAGAGAATGTaGGCCCAGCTGGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGLNKRM*AQLEER
Trigger: TCTCTCCTCCAGCTGGGCTCACATTCTCTTGTTAAG...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGTGCTGGGCACTGATTaGATGCTTTACAGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGVLGTD*MLYRCH
Trigger: GTGACACCTGTAAAGCATTCAATCAGTGCCCAGCAC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGATCAGTGACAGATCACTaGTGCTTTTCATCAGACCAA +
Preference number: 4 (lower is better)
Translates to: PWPLSARNLRSHRADRHGSVTDH*CFSSDQ
Trigger: TTGGTCTGATGAAAAGCAGCAGTGATCTGTCACTGA...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGACTGTATGTGGGTTGCTaGTCCGTAATGCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGLYVGC*SVMHSW
Trigger: CCAACTATGCATTACGGAGCAGCAACCCACATACAG...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCACCCTTATGTCTGGGTaGCTTAAATTTGTGATGCCT +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPTLMSG*LKFVMP
Trigger: AGGCATCACAAATTTAAGGCACCCAGACATAAGGGT...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCCCCTTGACAAAGTCTTaGTCTACACGTTTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPPLTKS*STRFCS
Trigger: ACTACAGAAACGTGTAGAGCAAGACTTTGTCAAGGG...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
52% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTGGGCCCAGCGTGGGATaGTACAGGCTCACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCGPSVG*YRLTRR
Trigger: CCTGCGAGTGAGCCTGTACCATCCCACGCTGGGCCC...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTCTGGGGGTTCCCTCTaGAGCTGTATTTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGSGGSL*SCISVP
Trigger: AGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGAGATCTGGCACAAGGTaGGTGCTTGGTGAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGRSGTR*VLGEGL
Trigger: CAAACCTTCACCAAGCACCCACCTTGTGCCAGATCT...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATGCAGGGCTAGCAGAGTaGACTGTCTGGGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHAGLAE*TVWGFP
Trigger: AGGGAACCCCCAGACAGTGCACTCTGCTAGCCCTGC...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTGAATCCTATTGGGTATaGCAGCTTAATGAAATACTT +
Preference number: 4 (lower is better)
Translates to: WMECWHSEAGVASGRVGGESYWV*QLNEIL
Trigger: AAGTATTTCATTAAGCTGGCATACCCAATAGGATTC...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GAAATTGTTGACAGCTACAGACCCAGAGATTCGAGTCAGCCAGGGGAACAGGGCGTAGCTTGCCCTGGGTaGAAAACGATCATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EIVDSYRPRDSSQPGEQGVACPG*KTIILL
Trigger: CAAAAGGATGATCGTTTTGCACCCAGGGCAAGCTAC...GCCCTGTTCCCCTGGCTGACTCGAATCTCTGGGTCTGTAGCTGTCAACAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTGAAAGTGAAGGTGGGTaGCATGGATCTGATGATTTC +
Preference number: 4 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGESEGG*HGSDDF
Trigger: GAAATCATCAGATCCATGGCACCCACCTTCACTTTC...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCGATAGTGATATCAAGTaGGAAGACCAGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFDSDIK*EDQALK
Trigger: CTTCAGGGCCTGGTCTTCGCACTTGATATCACTATC...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTCTAGAGGGTCTGCGCTaGCCCAGCCAGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCLEGLR*PSQRVC
Trigger: ACAGACCCTCTGGCTGGGGCAGCGCAGACCCTCTAG...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATCAGATGGGCCCAGCGTaGGATGGTACAGGCTCACTC +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHQMGPA*DGTGSL
Trigger: GAGTGAGCCTGTACCATCCCACGCTGGGCCCATCTG...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATGGGCTGTCCCAAGTCTaGGAAGGGCCGTGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHGLSQV*EGPWRN
Trigger: GTTTCTCCACGGCCCTTCCCAGACTTGGGACAGCCC...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATGCAGAGTGCACTGTCTaGGGGTTCCCTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHAECTV*GFPLEL
Trigger: CAGCTCCAGAGGGAACCCCCAGACAGTGCACTCTGC...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTTCCTTTCCAGAAATGTaGGTCCCACCTTTCCAATTT +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCSFPEM*VPPFQF
Trigger: AAATTGGAAAGGTGGGACTCACATTTCTGGAAAGGA...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTTTGGTGAAGGTTTGCTaGATGAATGAGGAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCLVKVC*MNEELL
Trigger: AAGCAGTTCCTCATTCATTCAGCAAACCTTCACCAA...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCAAATCGCATAGCTACTaGTGGTGTGATGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCKSHSY*WCDVGQ
Trigger: TTGCCCAACATCACACCATCAGTAGCTATGCGATTT...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGGAGCAGCGTTCATGTaGACTGTATGTTCGTGTTTA +
Preference number: 4 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGGAAFM*TVCSCL
Trigger: TAAACACGAACATACAGTGCACATGAACGCTGCTCC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGCAATGCAGGTTAGGCTaGCACCATGAGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKQCRLG*HHEGSW
Trigger: CCAGCTTCCCTCATGGTGGCAGCCTAACCTGCATTG...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TTGGGTTCTGGAGCCAGCTTACTGGGGTGTGAGTCTTCCTTAGCTCCGTGTGGAGAGGAATCACAGCCCTaGAATTCAAATAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LGSGASLLGCESSLAPCGEESQP*NSNRVH
Trigger: ATGAACCCTATTTGAATTGCAGGGCTGTGATTCCTC...TCCACACGGAGCTAAGGAAGACTCACACCCCAGTAAGCTGGCTCCAGAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTGCAGTTCAGGAACGTaGCAGAACATACTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGCSSGT*QNILQF
Trigger: AAACTGAAGTATGTTCTGCCACGTTCCTGAACTGCA...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTCCTCCAGGTCTTGGCTaGAGAGGGCTGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCPPGLG*RGLSQV
Trigger: GACTTGGGACAGCCCTCTCCAGCCAAGACCTGGAGG...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp TCAGGGCCTCTAAAAGTATATGATGTTCCCATTACATaGCATAGCTCTGGCCACAGAGGGTGCTTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGPLKVYDVPIT*HSSGHRGCFSP
Trigger: GGGGGAGAAGCACCCTCTGTGGCCAGAGCTATGCAATGTAATGGGAACATCATATACTTTTAGAGGCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp GTTTGCCTTATTCACTTCTGGTTCAGTTCCGTGGCTTaGCACAGATCTGGCACAAGGTGGGTGCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: VCLIHFWFSSVA*HRSGTRWVLGE
Trigger: TTCACCAAGCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAATAAGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCCTTGTCAACCTTGCATaGTGCAGCTCAAGTATTTCA +
Preference number: 4 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCLVNLA*CSSSIS
Trigger: TGAAATACTTGAGCTGCATCATGCAAGGTTGACAAG...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATAAATCCCCTCCCTGTTaGCTACCAGGTCCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHKSPPC*LPGPWL
Trigger: TAGCCACGGACCTGGTAGGCAACAGGGAGGGGATTT...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGTGACAGATCACTGCTaGTTTTCATCAGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCVTDHC*FSSDQN
Trigger: ATTTTGGTCTGATGAAAAGCAGCAGTGATCTGTCAC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATGGCCTGTCTTCCTTCTaGTGCTATGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHGLSSF*CYAVHP
Trigger: AGGATGAACTGCATAGCAGCAGAAGGAAGACAGGCC...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCTGGGCAGAGCTTAACTaGCTTAAAAACTTGGTACAG +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFWAELN*LKNLVQ
Trigger: CTGTACCAAGTTTTTAAGGCAGTTAAGCTCTGCCCA...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGAACGCGAACCAGCATCTaGATGCCTGAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRTRTSI*MPEKET
Trigger: GGTCTCCTTCTCAGGCATCCAGATGCTGGTTCGCGT...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTATCAGGGAATCCTATTaGGTATGCCAGCTTAATGAA +
Preference number: 4 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCIRESY*VCQLNE
Trigger: TTCATTAAGCTGGCATACCCAATAGGATTCCCTGAT...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTGTCTGCATGACAGCGTaGCGTGCATGTGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCVCMTA*RACGPS
Trigger: AGATGGGCCACATGCACGCCACGCTGTCATGCAGAC...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp TGCTATTTAGACACCGGGAGACCTGGAAACAGCCCCTaGACAAAGTCTTGCTCTACACGTTTCTGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: CYLDTGRPGNSP*TKSCSTRFCSD
Trigger: GTCACTACAGAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTCTAAATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp GCACTGTCTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTGCCTCTAAAAGTATATaGTGTTCCCATTACATTGCA +
Preference number: 4 (lower is better)
Translates to: ALSGGSLWSCISVPPPGLASKSI*CSHYIA
Trigger: TGCAATGTAATGGGAACATCATATACTTTTAGAGGC...AAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGCCCATGGCCTTTGTCTaGAAGGAACTTGAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKPMAFV*KELEVS
Trigger: TGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGGG...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATAAACCCCAGGCAACCTaGATCTGCTACCCTGAACCA +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHKPQAT*ICYPEP
Trigger: TGGTTCAGGGTAGCAGATCCAGGTTGCCTGGGGTTT...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATCTGGAGAGTGGGGTCTaGGATCATGGTGACCATGTA +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHLESGV*DHGDHV
Trigger: TACATGGTCACCATGATCCCAGACCCCACTCTCCAG...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATTCAGGGGTGAAGGGCTaGCATGGAAATAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHSGVKG*HGNSRQ
Trigger: TTGTCTGCTATTTCCATGTCAGCCCTTCACCCCTGA...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGATTCCTTCTGCTGCTATaGAGTTCATCCTGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRFLLLL*SSSWVP
Trigger: AGGGACCCAGGATGAACTGCATAGCAGCAGAAGGAA...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGTTGCTTCATCCCTATTaGAGAGGAAGCTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKLLHPY*RGSFPH
Trigger: GTGTGGGAAGCTTCCTCTCCAATAGGGATGAAGCAA...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GACACCGGGAGACCTGGAAACAGCCCCTTGACAAAGTCTTGCTCTACACGTTTCTTATTAAGTGTGTGCTaGGCACTGATTGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: DTGRPGNSPLTKSCSTRFLLSVC*ALIECF
Trigger: AAAGCATTCAATCAGTGCCCAGCACACACTTAATAA...GAAACGTGTAGAGCAAGACTTTGTCAAGGGGCTGTTTCCAGGTCTCCCGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGAAGAATTGGTTCATTATaGGCAAGGCAGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRRIGSL*ARQPVG
Trigger: ACCCACTGGCTGCCTTGCTCATAATGAACCAATTCT...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR TCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATCTTGTGGCTGTGATCTaGGTGTTTTTGCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHLVAVI*VFLLHP
Trigger: GGGATGAAGCAAAAACACTCAGATCACAGCCACAAG...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTTTGCATCCAGGACTATaGTGTCTAGCGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCLHPGL*CLACLL
Trigger: CAGCAGACACGCTAGACAGCATAGTCCTGGATGCAA...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp ATTCAGTTACTTGTCCAGGATCACAGAACTATAGTAAGTGGGGGTGGGGACAAGATTCCCTCAGTGTCCTaGTGTGAAACTGTTAAAGCC +
Preference number: 4 (lower is better)
Translates to: IQLLVQDHRTIVSGGGDKIPSVS*CETVKA
Trigger: GGCTTTAACAGTTTCACAGCAGGACACTGAGGGAAT...CTTGTCCCCACCCCCACTTACTATAGTTCTGTGATCCTGGACAAGTAACTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTGAGCAAGGCAGCCAGTaGGTTTTGCTTGTCAACCTT +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCEQGSQ*VLLVNL
Trigger: AAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTC...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp GTGTCTCTCACGGACAGCTTGGCAAGATTCACATTCTaGGAAAAGCAGAGGAATGCGAGGGTTAAAATACCT +
Preference number: 4 (lower is better)
Translates to: VSLTDSLARFTF*EKQRNARVKIP
Trigger: AGGTATTTTAACCCTCGCATTCCTCTGCTTTTCCAAGAATGTGAATCTTGCCAAGCTGTCCGTGAGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp GTGGGTTTTGCTTGTCAACCTTGCATGATGCAGCTCAAGTATTTCAAATCCTGTCTCCCTGAGGGAGTTTaGCTTATTCACTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGFACQPCMMQLKYFKSCLPEGV*LIHFWF
Trigger: GAACCAGAAGTGAATAAGGCAAACTCCCTCAGGGAG...ACAGGATTTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR GCA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATGTTCTGTATGTGGGTTaGTGCTCCGTAATGCATAGT +
Preference number: 4 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHVLYVG*CSVMHS
Trigger: ACTATGCATTACGGAGCAGCAACCCACATACAGAAC...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp TGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTaGTCAACCTTGCATGATGCAGCTCAAGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: WFIMSKAASGFC*STLHDAAQVFQ
Trigger: TTGAAATACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CCA 90 bp TCTGGGGTATGCCTGAATGTAACTAATGTAGCTCCTTTTGTGCCTGAGTGTAGAGAGCGAAATAACTGCTaGGCTGAGTTCTTACACAAA +
Preference number: 4 (lower is better)
Translates to: SGVCLNVTNVAPFVPECRERNNC*AEFLHK
Trigger: TTTGTGTAAGAACTCAGCCCAGCAGTTATTTCGCTC...TCTACACTCAGGCACAAAAGGAGCTACATTAGTTACATTCAGGCATACCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
3UTR CAA 72 bp ACTTGCCCAAATCGCATAGCTACTGATGGTGTGATGTaGGGCAAGATATGTAACCTTTCCAAGTCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TCPNRIATDGVM*GKICNLSKSQF
Trigger: AAACTGAGACTTGGAAAGGTTACATATCTTGCCCAACATCACACCATCAGTAGCTATGCGATTTGGGCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 90 bp TGGGCGTCCTGCCCCCGTCCGAGAAGCAGAGGGCTGGTATCATGCTaGAGCCGTGGTGGGACATTGGCAAAGGCAGATGGGCCCAGCGTG +
Preference number: 5 (lower is better)
Translates to: WASCPRPRSRGLVSC*SRGGTLAKADGPSV
Trigger: CACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGGACGGGGGCAGGACGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 90 bp GCAGCTGGAGGTGGGCGTCCTGCCCCCGTCCGAGAAGCAGAGGGCTaGTATCATGCTGCAGCCGTGGTGGGACATTGGCAAAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: AAGGGRPAPVREAEG*YHAAAVVGHWQRQM
Trigger: CATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGGACGGGGGCAGGACGCCCACCTCCAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp TGGATGGAGTGTTGGCACAGTGAGGCGGGTGTTGCAAGTGGACGCGTCGGGGGTTTGCGGCTCAGGGCCTaGAGGCAGAAGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WMECWHSEAGVASGRVGGLRLRA*RQKASR
Trigger: CCTGCTGGCCTTCTGCCTCAAGGCCCTGAGCCGCAA...ACCCCCGACGCGTCCACTTGCAACACCCGCCTCACTGTGCCAACACTCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 90 bp CTGCCCCCGTCCGAGAAGCAGAGGGCTGGTATCATGCTGCAGCCGTaGTGGGACATTGGCAAAGGCAGATGGGCCCAGCGTGGGATGGTA +
Preference number: 5 (lower is better)
Translates to: LPPSEKQRAGIMLQP*WDIGKGRWAQRGMV
Trigger: TACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGGACGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 90 bp TGGATGCCTGAGAAGGAGACCCTGTTGACGGTGCTCAGGGGGACCTaGTCCAGGTACCTCAGCGTCAGCCCATTGACCCACACACAGCCC +
Preference number: 5 (lower is better)
Translates to: WMPEKETLLTVLRGT*SRYLSVSPLTHTQP
Trigger: GGGCTGTGTGTGGGTCAATGGGCTGACGCTGAGGTACCTGGAGCAGGTCCCCCTGAGCACCGTCAACAGGGTCTCCTTCTCAGGCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 90 bp AGCCGTGGTGGGACATTGGCAAAGGCAGATGGGCCCAGCGTGGGATaGTACAGGCTCACTCGCAGGACGGTGAGGGGCTTCTCCATGGAA +
Preference number: 5 (lower is better)
Translates to: SRGGTLAKADGPSVG*YRLTRRTVRGFSME
Trigger: TTCCATGGAGAAGCCCCTCACCGTCCTGCGAGTGAGCCTGTACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS TCA 90 bp CAGATGGGCCCAGCGTGGGATGGTACAGGCTCACTCGCAGGACGGTaGGGGGCTTCTCCATGGAAGAAGTCCTTATTGCCGGGGCACATC +
Preference number: 5 (lower is better)
Translates to: QMGPAWDGTGSLAGR*GASPWKKSLLPGHI
Trigger: GATGTGCCCCGGCAATAAGGACTTCTTCCATGGAGAAGCCCCTCACCGTCCTGCGAGTGAGCCTGTACCATCCCACGCTGGGCCCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 90 bp CGAGAAGCAGAGGGCTGGTATCATGCTGCAGCCGTGGTGGGACATTaGCAAAGGCAGATGGGCCCAGCGTGGGATGGTACAGGCTCACTC +
Preference number: 5 (lower is better)
Translates to: REAEGWYHAAAVVGH*QRQMGPAWDGTGSL
Trigger: GAGTGAGCCTGTACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGAGCACAGGTAAGCCCTaGGGTTCTGGAGCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLSTGKP*GSGASL
Trigger: TAAGCTGGCTCCAGAACCCAAGGGCTTACCTGTGCT...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 90 bp AAACCCCAGGCAACCTGGATCTGCTACCCTGAACCAGGGGGAGGCTaGCCCTGGGAGATGCCTTCCCATTCGTCAGTTTCCTCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: KPQATWICYPEPGGG*PWEMPSHSSVSSAS
Trigger: TGAGGCTGAGGAAACTGACGAATGGGAAGGCATCTCCCAGGGGCAGCCTCCCCCTGGTTCAGGGTAGCAGATCCAGGTTGCCTGGGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CTGGCTCAGACTTTAGTATCCAAGGGGACTGCTGCCTTGACCACCAGAGCCCCCCTCAGCGTCAGCCCATaGACCCACACACAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: LAQTLVSKGTAALTTRAPLSVSP*THTQPL
Trigger: CAAGGGCTGTGTGTGGGTCAATGGGCTGACGCTGAG...GGGGGCTCTGGTGGTCAAGGCAGCAGTCCCCTTGGATACTAAAGTCTGAGCCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 90 bp CCTGGATCTGCTACCCTGAACCAGGGGGAGGCTGCCCCTGGGAGATaGCTTCCCATTCGTCAGTTTCCTCAGCCTCAGGTCTGTAAATCA +
Preference number: 5 (lower is better)
Translates to: PGSATLNQGEAAPGR*LPIRQFPQPQVCKS
Trigger: TGATTTACAGACCTGAGGCTGAGGAAACTGACGAATGGGAAGGCATCTCCCAGGGGCAGCCTCCCCCTGGTTCAGGGTAGCAGATCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGAGCCGTGGTGGGACATaGGCAAAGGCAGATGGGCCC +
Preference number: 5 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGSRGGT*AKADGP
Trigger: GGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCT...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGAGAAGGAGACCCTGTaGACGGTGCTCAGGGGGACC +
Preference number: 5 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGEKETL*TVLRGT
Trigger: GGTCCCCCTGAGCACCGTCAACAGGGTCTCCTTCTC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTGGGCAAGCCTGGGTCTaGCCCACCTCTGTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGGQAWV*PTSVFL
Trigger: CAGGAAAACAGAGGTGGGCAAGACCCAGGCTTGCCC...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGGGCAGAAAACAGAAATaGTTGACAGCTACAGACCCA +
Preference number: 5 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLGRKQK*LTATDP
Trigger: TGGGTCTGTAGCTGTCAACAATTTCTGTTTTCTGCC...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCACTTCCTGTCTGCCCATGGCTTCGCGGCCTTCTCACCCCAGCTGGCCAACTGAGAAAACAGAAATTGTaGACAGCTACAGACCCAGAG +
Preference number: 5 (lower is better)
Translates to: PLPVCPWLRGLLTPAGQLRKQKL*TATDPE
Trigger: CTCTGGGTCTGTAGCTGTCAACAATTTCTGTTTTCT...CAGTTGGCCAGCTGGGGTGAGAAGGCCGCGAAGCCATGGGCAGACAGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CTGAGGGCCTCGCAGATGCTTCACTCGAAAGATTGGAGTTGCAGAGTCCCCTGTGGACCTCCTTGTAGCTaGCCCTGGGTGCAAAACGAT +
Preference number: 5 (lower is better)
Translates to: LRASQMLHSKDWSCRVPCGPPCS*PWVQND
Trigger: ATCGTTTTGCACCCAGGGCAAGCTACAAGGAGGTCC...ACAGGGGACTCTGCAACTCCAATCTTTCGAGTGAAGCATCTGCGAGGCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGTGGAAGAAGTCCTTATaGCCGGGGCACATCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGWKKSL*PGHIWL
Trigger: GAGCCAGATGTGCCCCGGCAATAAGGACTTCTTCCA...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp GCACTGTCTGGGGGTTCCCTCTGGAGCTGTATTTCTGTTCCTCCTCCAGGTCTTCGTGCCTGTGGGTATTaGAAAGCTGAAGGTAACCCC +
Preference number: 5 (lower is better)
Translates to: ALSGGSLWSCISVPPPGLRACGY*KAEGNP
Trigger: GGGGTTACCTTCAGCTTTCAAATACCCACAGGCACG...AAGACCTGGAGGAGGAACAGAAATACAGCTCCAGAGGGAACCCCCAGACAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCATGGCCTTTGTCTGCAAGGAACTTGAGGTCTCACCGGGCAGACAGGCACGGATTTGCTTCATCCCTATaGGAGAGGAAGCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: PWPLSARNLRSHRADRHGFASSL*ERKLPT
Trigger: TGTGGGAAGCTTCCTCTCCAATAGGGATGAAGCAAA...TCCGTGCCTGTCTGCCCGGTGAGACCTCAAGTTCCTTGCAGACAAAGGCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATACCCACACACAGCCCTaGCGGCTCAGGGCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHTHTQP*RLRALR
Trigger: CCTCAAGGCCCTGAGCCGCAAGGGCTGTGTGTGGGT...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp TTGGTGTCCAGGTACAGTCTCCAGGCCGTGGCTTCTCGAGTTCTGTATGTGGGTTGCACTCCTGAATGCTaGACTTTCCTGAGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: LVSRYSLQAVASRVLYVGCTPEC*TFLSAR
Trigger: CCTTGCACTCAGGAAAGTCAAGCATTCAGGAGTGCA...ACCCACATACAGAACTCGAGAAGCCACGGCCTGGAGACTGTACCTGGACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CTCCTCCCACAGTCTTGGATGGGTTTTGAGGGTCTGGTGCGGTGTCCGGTGAACTTTTGCTTGTCAACCTaGCATGATGCAGCTCAAGTA +
Preference number: 5 (lower is better)
Translates to: LLPQSWMGFEGLVRCPVNFCLST*HDAAQV
Trigger: TACTTGAGCTGCATCATGCAAGGTTGACAAGCAAAA...GTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAAGACTGTGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp TTCACTTCTGGTTCAGTTCCGTGGCTTTGCACAGATCTGGCACAAGGTGGGTGCCATTCCCTAAAGACCTaGCCCTCAAGTCAACCAAGG +
Preference number: 5 (lower is better)
Translates to: FTSGSVPWLCTDLAQGGCHSLKT*PSSQPR
Trigger: CCTTGGTTGACTTGAGGGCAAGGTCTTTAGGGAATG...GCACCCACCTTGTGCCAGATCTGTGCAAAGCCACGGAACTGAACCAGAAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS TCA 90 bp CGTCAGTTTCCTCAGCCTCAGGTCTGTAAATCAGGGGTGAAGGGCTaGCATGGAAATAGCAGACAAAAGCCTCCAGGGATGTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: RQFPQPQVCKSGVKG*HGNSRQKPPGMCLL
Trigger: AAGAAGGCACATCCCTGGAGGCTTTTGTCTGCTATTTCCATGTCAGCCCTTCACCCCTGATTTACAGACCTGAGGCTGAGGAAACTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AGCTGCTGCCCTTGTTCACCGAGAAAATCCTCCTGCCCTTGGCGTACCTGGCTCCTGTTTGTTCGGTGTTaGCAGAATTGGTTCATTATG +
Preference number: 5 (lower is better)
Translates to: SCCPCSPRKSSCPWRTWLLFVRC*QNWFIM
Trigger: CATAATGAACCAATTCTGCAAACACCGAACAAACAG...GAGCCAGGTACGCCAAGGGCAGGAGGATTTTCTCGGTGAACAAGGGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AAAGTCTCAAGGACTAGAAGGAAGCACCAGCCTTGTTCTGCCCCAGCTAGAGGGGATGTTCCCATTACATaGCATAGCTCTGGCCACAGA +
Preference number: 5 (lower is better)
Translates to: KVSRTRRKHQPCSAPARGDVPIT*HSSGHR
Trigger: TCTGTGGCCAGAGCTATGCAATGTAATGGGAACATC...CCCTCTAGCTGGGGCAGAACAAGGCTGGTGCTTCCTTCTAGTCCTTGAGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATGCCAGTGGGTTTTGCTaGTCAACCTTGCATGATGCA +
Preference number: 5 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHASGFC*STLHDA
Trigger: TGCATCATGCAAGGTTGACAAGCAAAACCCACTGGC...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATTCGGTGTTTGCAGAATaGGTTCATTATGAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHSVFAE*VHYEQG
Trigger: GCCTTGCTCATAATGAACCAATTCTGCAAACACCGA...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp CCTTTCCAATTTCCTCTTACACCTCGTCTATATTTCCCACCCCCACGTCTGCATAAAACGATCATCCTTTaGGGCAGAAAACAGAAATTG +
Preference number: 5 (lower is better)
Translates to: PFQFPLTPRLYFPPPRLHKTIIL*GRKQKL
Trigger: CAATTTCTGTTTTCTGCCCAAAAGGATGATCGTTTT...ATGCAGACGTGGGGGTGGGAAATATAGACGAGGTGTAAGAGGAAATTGGAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS-3UTR CAA 90 bp AATTGGTTCATTATGAGCAAGGCAGCCAGTGGGTTTTGCTTGTCAACCTTGCATACTGATGGTGTGATGTaGGGCAAGATATGTAACCTT +
Preference number: 5 (lower is better)
Translates to: NWFIMSKAASGFCLSTLHTDGVM*GKICNL
Trigger: AAGGTTACATATCTTGCCCAACATCACACCATCAGT...ATGCAAGGTTGACAAGCAAAACCCACTGGCTGCCTTGCTCATAATGAACCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 72 bp GGTGGGCGTCCTGCCCCCGTCCGAGAAGCAGAGGGCTaGTATCATGCTGCAGCCGTGGTGGGACATTGGCAA +
Preference number: 6 (lower is better)
Translates to: GGRPAPVREAEG*YHAAAVVGHWQ
Trigger: TTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGGACGGGGGCAGGACGCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 72 bp AGTCTGGGAAGGGCCGTGGAGAAACCCCAGGCAACCTaGATCTGCTACCCTGAACCAGGGGGAGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SLGRAVEKPQAT*ICYPEPGGGCP
Trigger: GGGGCAGCCTCCCCCTGGTTCAGGGTAGCAGATCCAGGTTGCCTGGGGTTTCTCCACGGCCCTTCCCAGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 72 bp GGGACATTGGCAAAGGCAGATGGGCCCAGCGTGGGATaGTACAGGCTCACTCGCAGGACGGTGAGGGGCTTC +
Preference number: 6 (lower is better)
Translates to: GTLAKADGPSVG*YRLTRRTVRGF
Trigger: GAAGCCCCTCACCGTCCTGCGAGTGAGCCTGTACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CAA 72 bp TACCTCAGCGTCAGCCCATTGACCCACACACAGCCCTaGCGGCTCAGGGCCTTGAGGCAGAAGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: YLSVSPLTHTQP*RLRALRQKASR
Trigger: CCTGCTGGCCTTCTGCCTCAAGGCCCTGAGCCGCAAGGGCTGTGTGTGGGTCAATGGGCTGACGCTGAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 72 bp TGCCCCCGTCCGAGAAGCAGAGGGCTGGTATCATGCTaGAGCCGTGGTGGGACATTGGCAAAGGCAGATGGG +
Preference number: 6 (lower is better)
Translates to: CPRPRSRGLVSC*SRGGTLAKADG
Trigger: CCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGGACGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 72 bp GAGAAGGAGACCCTGTTGACGGTGCTCAGGGGGACCTaGTCCAGGTACCTCAGCGTCAGCCCATTGACCCAC +
Preference number: 6 (lower is better)
Translates to: EKETLLTVLRGT*SRYLSVSPLTH
Trigger: GTGGGTCAATGGGCTGACGCTGAGGTACCTGGAGCAGGTCCCCCTGAGCACCGTCAACAGGGTCTCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CAA 90 bp CCGAGAAGCAGAGGGCTGGTATCATGCTGCAGCCGTGGTGGGACATaGGCAAAGGCAGATGGGCCCAGCGTGGGATGGTACAGGCTCACT +
Preference number: 6 (lower is better)
Translates to: PRSRGLVSCCSRGGT*AKADGPSVGWYRLT
Trigger: AGTGAGCCTGTACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS GCA 72 bp GCAACCTGGATCTGCTACCCTGAACCAGGGGGAGGCTaGCCCTGGGAGATGCCTTCCCATTCGTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: ATWICYPEPGGG*PWEMPSHSSVS
Trigger: GGAAACTGACGAATGGGAAGGCATCTCCCAGGGGCAGCCTCCCCCTGGTTCAGGGTAGCAGATCCAGGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 72 bp GAGGGCTGGTATCATGCTGCAGCCGTGGTGGGACATTaGCAAAGGCAGATGGGCCCAGCGTGGGATGGTACA +
Preference number: 6 (lower is better)
Translates to: EGWYHAAAVVGH*QRQMGPAWDGT
Trigger: TGTACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 72 bp TCCGAGAAGCAGAGGGCTGGTATCATGCTGCAGCCGTaGTGGGACATTGGCAAAGGCAGATGGGCCCAGCGT +
Preference number: 6 (lower is better)
Translates to: SEKQRAGIMLQP*WDIGKGRWAQR
Trigger: ACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCTGCTTCTCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CAA 72 bp AGAGGGCTGGTATCATGCTGCAGCCGTGGTGGGACATaGGCAAAGGCAGATGGGCCCAGCGTGGGATGGTAC +
Preference number: 6 (lower is better)
Translates to: RGLVSCCSRGGT*AKADGPSVGWY
Trigger: GTACCATCCCACGCTGGGCCCATCTGCCTTTGCCAATGTCCCACCACGGCTGCAGCATGATACCAGCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CAA 72 bp CGAACCAGCATCTGGATGCCTGAGAAGGAGACCCTGTaGACGGTGCTCAGGGGGACCTGCTCCAGGTACCTC +
Preference number: 6 (lower is better)
Translates to: RTSIWMPEKETL*TVLRGTCSRYL
Trigger: GAGGTACCTGGAGCAGGTCCCCCTGAGCACCGTCAACAGGGTCTCCTTCTCAGGCATCCAGATGCTGGTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CAA 90 bp TCTTCTACGCGAACCAGCATCTGGATGCCTGAGAAGGAGACCCTGTaGACGGTGCTCAGGGGGACCTGCTCCAGGTACCTCAGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: SSTRTSIWMPEKETL*TVLRGTCSRYLSVS
Trigger: GCTGACGCTGAGGTACCTGGAGCAGGTCCCCCTGAGCACCGTCAACAGGGTCTCCTTCTCAGGCATCCAGATGCTGGTTCGCGTAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS TCA 72 bp CCAGCGTGGGATGGTACAGGCTCACTCGCAGGACGGTaGGGGGCTTCTCCATGGAAGAAGTCCTTATTGCCG +
Preference number: 6 (lower is better)
Translates to: PAWDGTGSLAGR*GASPWKKSLLP
Trigger: CGGCAATAAGGACTTCTTCCATGGAGAAGCCCCTCACCGTCCTGCGAGTGAGCCTGTACCATCCCACGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537858.2
CDS CCA 72 bp TCCAGGGATGTGCCTTCTTCTACGCGAACCAGCATCTaGATGCCTGAGAAGGAGACCCTGTTGACGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SRDVPSSTRTSI*MPEKETLLTVL
Trigger: GAGCACCGTCAACAGGGTCTCCTTCTCAGGCATCCAGATGCTGGTTCGCGTAGAAGAAGGCACATCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537858.2