RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000066056

Ensembl transcript IDs: ENST00000372476.8, ENST00000461061.1, ENST00000471187.1, ENST00000473014.1, ENST00000480269.1, ENST00000485125.1, ENST00000488437.1, ENST00000492599.1, ENST00000492874.1, ENST00000538015.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGTTGGGGGAGCAGTGGGATGGGAAACACACCTGTGGGGCAGCTaGACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACA +
Preference number: 1 (lower is better)
Translates to: CVGGAVGWETHLWGS*TRKKDAQDSYETPT
Trigger: TGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTCAGCTGCCCCACAGGTGTGTTTCCCATCCCACTGCTCCCCCAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
3UTR-3UTR CCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTGACACCTACAAAGCATaGGAACCCAGTTCCCCTAAG +
Preference number: 2 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVDTYKA*EPSSPK
Trigger: CTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTC...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAGGGCAGAAGCACGTGTaGAGGGGGCGAGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPGQKHV*RGRGRA
Trigger: GGCCCGGCCTCGCCCCCTGCACACGTGCTTCTGCCC...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTTGTGCACGTAGATaGCGCGCGTGCGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVCCARR*RACAAP
Trigger: GGGCGCGGCGCACGCGCGTCATCTACGTGCACAACA...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAGACAGTCTGTGGTCATaGGGGTGGGAGGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPDSLWS*GWEAPR
Trigger: CCTGGGGGCCTCCCACCCTCATGACCACAGACTGTC...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCACGAAGCGTGACCTGGTaGGAACCGTTGCGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPRSVTW*EPLRAR
Trigger: CCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCG...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAGCCGAAAGAAGGCGCTaGCCAGGGGGCTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPAERRR*PGGWLP
Trigger: TGGAAGCCAGCCCCCTGGGCAGCGCCTTCTTTCGGC...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAAGGACGAGCTGGGCCTaGGGTCAGATGCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPRTSWA*GQMLWA
Trigger: GGCCCACAGCATCTGACCCCAGGCCCAGCTCGTCCT...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTACCGTCGCCCACCAGTaGCCCGGGCACCAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVTVAHQ*PGHQGQ
Trigger: TTGCCCTTGGTGCCCGGGCCACTGGTGGGCGACGGT...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTCCGGCTCTCTTGGACTaGGCCCTCAGCCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVPALLD*ALSLQP
Trigger: GGGCTGCAGGCTGAGGGCCCAGTCCAAGAGAGCCGG...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAATGGCCCGGATGACCTaGCCGAAGTTCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPMARMT*PKFPSP
Trigger: CGGGGAGGGGAACTTCGGCCAGGTCATCCGGGCCAT...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTCTCCTCGCCCGAGCCTaGCTGGTAGGTGAAGGTGCG +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVLLARA*LVGEGA
Trigger: CGCACCTTCACCTACCAGTCAGGCTCGGGCGAGGAG...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCCCTGGTGCGAACCGTTaGGCGCCAGGCGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSPGANR*APGAGV
Trigger: CACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGG...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAGTGGGTGCCAGGCGTaGGTCCCGTCAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVSGCQA*VPSGGQ
Trigger: CTGCCCTCCTGACGGGACTCACGCCTGGCACCCACT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTCAGGCCCTCTTCAGCTaGCCGGCTCTCTTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVQALFS*PALLDW
Trigger: CCAGTCCAAGAGAGCCGGGCAGCTGAAGAGGGCCTG...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAGTCCCTGAGCTGAACTaGAGGATGGTCTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPVPELN*RMVSSP
Trigger: GGGCGAGGAGACCATCCTGCAGTTCAGCTCAGGGAC...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCCCGCGAAGCGTGACCTaGTGCGAACCGTTGCGCGCC +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSPRSVT*CEPLRA
Trigger: GGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGG...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTGGGCTGGAGGCCCACTaGGGGGCAGAAGCACGTGTG +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVGLEAH*GAEARV
Trigger: CACACGTGCTTCTGCCCCCCAGTGGGCCTCCAGCCC...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCACATTGGCCGCATCACTaGCGAAACGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPHWPHH*RNAAAA
Trigger: GGCAGCTGCTGCGTTTCGCCAGTGATGCGGCCAATG...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTCAGTCCCCGAGCCCCTaGATGCTGGCCCGCATGCGG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGQSPSP*MLARMR
Trigger: CCGCATGCGGGCCAGCATTCAGGGGCTCGGGGACTG...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGTGGCCCGGGCGGGGTaGGCACGATACGGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGVARAG*ARYGRP
Trigger: AGGACGACCGTATCGTGCGCACCCCGCCCGGGCCAC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCATCACAGTGCACTCCATaGCACCCAGAGGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPSQCTP*HPEGQT
Trigger: TGTCTGCCCCTCTGGGTGGCATGGAGTGCACTGTGA...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCATGGACAGGAGCACAGTaGCGTCTGGCTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPWTGAQ*RLACVA
Trigger: AGCTACGCAAGCCAGACGGCACTGTGCTCCTGTCCA...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCATCCTGGCTTCCAGCATaGGGCCTAGCTGTAGCGCAA +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPSWLPA*GLAVAQ
Trigger: TTGCGCTACAGCTAGGCCGCATGCTGGAAGCCAGGA...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAGGGCAGTGCGGGCCTaGGGGGATGAGACGTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVRAVRA*GDETFS
Trigger: GGAGAACGTCTCATCCCCCCAGGCCCGCACTGCCCT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTAGCGCTGGGGGTCCGTaGGCCGCAGGTTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVSAGGP*AAGWPA
Trigger: TGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCT...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTGGCAGACACAACCACTaGACCGGTCACAAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVGRHNH*TGHKCH
Trigger: GTGGCACTTGTGACCGGTTCAGTGGTTGTGTCTGCC...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTGTTCTGAGGCCATGTTaGGGATCTGGGGGATCCGGT +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVVLRPC*GSGGSG
Trigger: ACCGGATCCCCCAGATCCTCAACATGGCCTCAGAAC...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCGGTCCCGCCAGCACTaGCGCATCAGCTCGTACACT +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVRSRQH*RISSYT
Trigger: AGTGTACGAGCTGATGCGTCAGTGCTGGCGGGACCG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGCTTGCGTAGCTCTATaGTGCCCCGCACGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSACVAL*CPARGR
Trigger: CCTTCCCCGTGCGGGGCAGCATAGAGCTACGCAAGC...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCTTCTCCCGCCGCTCCTaGCCCCGTGTCCCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTFSRRS*PRVPSH
Trigger: GTGGGACGGGACACGGGGGCAGGAGCGGCGGGAGAA...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAGTAGAGGCTGTCCCATaGTCTCGAGCAAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPVEAVP*SRAKAG
Trigger: CCCAGCTTTTGCTCGAGAGCATGGGACAGCCTCTAC...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAGCCATGTTGAGGATCTaGGGGATCCGGTCTGACTTC +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPAMLRI*GIRSDF
Trigger: GAAGTCAGACCGGATCCCCCAGATCCTCAACATGGC...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCATGGGGTCCACCACAATaGTCGACCAGTCCATGGTAC +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPWGPPQ*STSPWY
Trigger: GTACCATGGACTGGTCGACCATTGTGGTGGACCCCA...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCCGAGCCCCTGAATGCTaGCCCGCATGCGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSRAPEC*PACGRG
Trigger: ACCTCTTCCGCATGCGGGCCAGCATTCAGGGGCTCG...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCGCTGCCCGGCTCTCTTaGACTGGGCCCTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFAARLS*TGPSAC
Trigger: GCAGGCTGAGGGCCCAGTCCAAGAGAGCCGGGCAGC...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGGGGAGCAGTGGGATaGGAAACACACCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSGGAVG*ETHLWG
Trigger: GCCCCACAGGTGTGTTTCCCATCCCACTGCTCCCCC...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCACACAACCCCGCACGATaGGCCGAAAGAAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPHNPAR*AERRRC
Trigger: GCAGCGCCTTCTTTCGGCTCATCGTGCGGGGTTGTG...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCTGGGAGGCAGAAGGTaGGGCCCCGGCAGCCTGATA +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFLGGRR*GPGSLI
Trigger: TATCAGGCTGCCGGGGCCTCACCTTCTGCCTCCCAG...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTGGGAGTGGGAGTAGCTaGACAGGGCATGTTAGTGGT +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVGSGSS*TGHVSG
Trigger: ACCACTAACATGCCCTGTTCAGCTACTCCCACTCCC...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCCGCTCGATGGTGGCTaGACATTTGGGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVPLDGG*TFGSCS
Trigger: GCTGCAGCTCCCAAATGTGCAGCCACCATCGAGCGG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTGGGGTTCCCTGCAGCTaGACAGTTGATCCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVGVPCS*TVDPGH
Trigger: ATGCCCCGGATCAACTGTGCAGCTGCAGGGAACCCC...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCATGCGTAGCTCTATGCTaGCCCGCACGGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPCVALC*PARGRG
Trigger: ACCCCTTCCCCGTGCGGGGCAGCATAGAGCTACGCA...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTACTCTTCTACTGTGTTaGTCCAGTCCCCGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVTLLLC*SSPRAP
Trigger: AGGGGCTCGGGGACTGGAGCAACACAGTAGAAGAGT...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTACACATTCGCCGTCATaGTCGTGGCAGACACCTCCA +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVTHSPS*SWQTPP
Trigger: TGGAGGTGTCTGCCACGACCATGACGGCGAATGTGT...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAAGCGCCGGCTGTCTTaGCCGCCAGATGTGGACACA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVKRRLS*PPDVDT
Trigger: TGTGTCCACATCTGGCGGCCAAGACAGCCGGCGCTT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGCTGGCGGCTCTGCTTaGTCAGGAGCCGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGAGGSA*SGAEVQ
Trigger: CTGCACCTCGGCTCCTGACCAAGCAGAGCCGCCAGC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTGAGTCTGAGAGGGCCTaGGCGTGGAGGTGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVESERA*AWRCRG
Trigger: CCCCCGACACCTCCACGCCCAGGCCCTCTCAGACTC...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTGCAGCCAGGTCCCTGTaGATGAACTGCTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVAARSL*MNCFSL
Trigger: GAGTGAGAAGCAGTTCATCCACAGGGACCTGGCTGC...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCACGTTCTGGCTGGATaGCAGCTCAGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVHVLAG*QLRPPQ
Trigger: CTGAGGAGGCCTGAGCTGCCATCCAGCCAGAACGTG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAACCGCCGCGCCCACATaGGAAGCCAAGAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPTAAPT*EAKKRM
Trigger: CATCCTCTTCTTGGCTTCTCATGTGGGCGCGGCGGT...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCAGAAGCCGCGAAGCGTaGCCTGGTGCGAACCGTTGC +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFRSREA*PGANRC
Trigger: GCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCT...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCAAGTGCCACCATTCTaGCACTGGCACTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVQVPPF*HWHWSR
Trigger: CCGACTCCAGTGCCAGTGTCAGAATGGTGGCACTTG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCGGGCCTGGGGTCAGATaGTGTGGGCCTGACTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFGPGVR*CGPDCS
Trigger: TGAGCAGTCAGGCCCACAGCATCTGACCCCAGGCCC...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCACAAAACGGCCCTCTCTaGAGGCCTGTTCACAGCGGG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPQNGPL*RPVHSG
Trigger: CCCGCTGTGAACAGGCCTGCAGAGAGGGCCGTTTTG...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAGCACCCCCAGCCACCTaGACCTCCACAACGTACTTG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPAPPAT*TSTTYL
Trigger: CAAGTACGTTGTGGAGGTGCAGGTGGCTGGGGGTGC...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCTTCGAGGCTGCTCCATaGGGTAGCCCTGGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFFEAAP*GSPGAA
Trigger: AGCTGCCCCAGGGCTACCGCATGGAGCAGCCTCGAA...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCAGCCAGGACGAGCTaGGCCTGGGGTCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVPARTS*AWGQML
Trigger: CAGCATCTGACCCCAGGCCCAGCTCGTCCTGGCTGG...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCGTCAGGAAGAAGCGCTaGGGGTCCGTGAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTVRKKR*GSVSRR
Trigger: CCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGAC...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGCAGCCATAGGGGTCTaGGAGGCAGAAGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGAAIGV*EAEGEA
Trigger: GGCCTCACCTTCTGCCTCCCAGACCCCTATGGCTGC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGGGGAGACCACAAGCTaGCGGCTCTGCTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGGETTS*RLCLVR
Trigger: CCTGACCAAGCAGAGCCGCCAGCTTGTGGTCTCCCC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAGGCGGACAGTGGAGATaGGTCCATCCCCAGAGAACG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPGGQWR*VHPQRT
Trigger: CGTTCTCTGGGGATGGACCCATCTCCACTGTCCGCC...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCTCTCCTCCTTCCCCTaGCCGGCTCAGCTGCACACG +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVLSSFP*PAQLHT
Trigger: CGTGTGCAGCTGAGCCGGCCAGGGGAAGGAGGAGAG...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTCCTCCACAACGTACTTaGATATTGGCCCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVPPQRT*ILAQAE
Trigger: CTCTGCCTGGGCCAATATCCAAGTACGTTGTGGAGG...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGCCCGTTGCCCAGGGTaGACTCTTCTACTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSARCPG*TLLLCC
Trigger: GCAACACAGTAGAAGAGTCCACCCTGGGCAACGGGC...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCTCGGGCTGCAGTTTTaGCCGCCGGGTAAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVLGLQF*PPGKCQ
Trigger: TTGACACTTACCCGGCGGCCAAAACTGCAGCCCGAG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTTCACAGTGTGTGTaGCCTTGTCTGGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVCSQCV*PCLEAG
Trigger: ACCTGCTTCCAGACAAGGTCACACACACTGTGAACA...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAAGCCTGACTGGTAGGTaGAGGTGCGTCTCCGATGCA +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPSLTGR*RCVSDA
Trigger: TGCATCGGAGACGCACCTTCACCTACCAGTCAGGCT...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCATGCTGTGGGCCTGACTaGTCAGCCTGTGTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPCCGPD*SACVGQ
Trigger: CTGACCAACACAGGCTGAGCAGTCAGGCCCACAGCA...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAAGTGGCACTGTAGATaGCGCTCGATGGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVKWHCR*RSMVAA
Trigger: TGCAGCCACCATCGAGCGGCATCTACAGTGCCACTT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCTGCTCCTGGCAGCTCTaGCCAAAACGGCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFCSWQL*PKRPSL
Trigger: CAGAGAGGGCCGTTTTGGGCAGAGCTGCCAGGAGCA...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGATATGCCTGGGCACTaGTCCTGGCAGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGDMPGH*SWQLCP
Trigger: TGGGCAGAGCTGCCAGGAGCAGTGCCCAGGCATATC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACCCGGCAGCCTGATATaGCTGGGCACTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGPGSLI*LGTAPG
Trigger: GCCAGGAGCAGTGCCCAGGCATATCAGGCTGCCGGG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCACCTGGCCGGCTCAGCTaGACACGAACACTGTATCCT +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPPGRLS*TRTLYP
Trigger: AGGATACAGTGTTCGTGTGCAGCTGAGCCGGCCAGG...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCGGCAGAGCCTCCGGGTaGTTCCATGTCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFGRASG*FHVSWI
Trigger: GATCCAGCTGACATGGAAGCACCCGGAGGCTCTGCC...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACCCCGAGCCCCTGAATaGTGGCCCGCATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGPRAPE*WPACGR
Trigger: TCTTCCGCATGCGGGCCAGCATTCAGGGGCTCGGGG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAAAGGTGCGTCTCCGATaGAGGCAGCTTCTGCGGATG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPKVRLR*RQLLRM
Trigger: CATCCGCAGAAGCTGCCTGCATCGGAGACGCACCTT...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACTCAGGGGCTCGGGCTaGAGTTTTGGCCGCCGGGTA +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGLRGSG*SFGRRV
Trigger: TACCCGGCGGCCAAAACTGCAGCCCGAGCCCCTGAG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTCAGCATTTTGATGGCTaGGTTCATCTTCAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVQHFDG*VHLQPV
Trigger: GACGGGCTGAAGATGAACGCAGCCATCAAAATGCTG...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGCGAAACGCAGCAGCTaGCGGGAGCTAAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGAKRSS*RELRVE
Trigger: CTCTACCCTTAGCTCCCGGCAGCTGCTGCGTTTCGC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCATTGTCTGGAAGCAGGTaGGCTCCAGGGCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPLSGSR*APGLLC
Trigger: GCACAACAGCCCTGGAGCCCACCTGCTTCCAGACAA...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCATGGTGGCTGCACATTTaGGAGCTGCAGCAGGAACCG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPWWLHI*ELQQEP
Trigger: CGGTTCCTGCTGCAGCTCCCAAATGTGCAGCCACCA...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTTCTCTGGCTCCACAATaGCCTTGGTGGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVSLAPQ*PWWTGA
Trigger: TGCTCCTGTCCACCAAGGCCATTGTGGAGCCAGAGA...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTGGTCGACCAGTCCATaGTACTGTCCTGGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGWSTSP*YCPGAG
Trigger: ACCGGCCCCAGGACAGTACCATGGACTGGTCGACCA...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCAACGTACTTGGATATTaGCCCAGGCAGAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSNVLGY*PRQSLR
Trigger: CCGGAGGCTCTGCCTGGGCCAATATCCAAGTACGTT...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCTCACATAGGCCTTCCTaGCTTCCAGCATGCGGCCTA +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSSHRPS*LPACGL
Trigger: TAGGCCGCATGCTGGAAGCCAGGAAGGCCTATGTGA...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGTGTTGGGGGAGCAGTaGGATGGGAAACACACCTGT +
Preference number: 4 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSVLGEQ*DGKHTC
Trigger: ACAGGTGTGTTTCCCATCCCACTGCTCCCCCAACAC...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCTGCAGCTGCACAGTTaGTCCGGGGCATCGTCTCTA +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFLQLHS*SGASSL
Trigger: TAGAGACGATGCCCCGGATCAACTGTGCAGCTGCAG...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCACCAGGTCCCTGTGGATaGACTGCTTCTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPPGPCG*TASHSG
Trigger: ACCTGAGTGAGAAGCAGTTCATCCACAGGGACCTGG...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTTCTGACTTCTCACAGTaGACTCCATGCCACCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVSDFSQ*TPCHPE
Trigger: CTCTGGGTGGCATGGAGTGCACTGTGAGAAGTCAGA...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCACAAGCTGGCGGCTCTaGTTGGTCAGGAGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTTSWRL*LVRSRG
Trigger: ACCTCGGCTCCTGACCAAGCAGAGCCGCCAGCTTGT...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACTCGCAGCCGGTCAGTaGCTTCCACATGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGLAAGQ*LPHASP
Trigger: AGGGCTGGCATGTGGAAGGCACTGACCGGCTGCGAG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACCGGGCCCAGGAGGGTaGAGTGGTAGAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGPGPGG*SGRAAH
Trigger: ATGTGCAGCTCTACCACTGCACCCTCCTGGGCCCGG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAGAATGCTGGCCCGCATaGGGAAGAGGTAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGECWPA*GRGSAC
Trigger: GCACGCGCTACCTCTTCCGCATGCGGGCCAGCATTC...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCAGCCTGCAGCCCGTTaGCCAGGGTGGACTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVQPAAR*PGWTLL
Trigger: TAGAAGAGTCCACCCTGGGCAACGGGCTGCAGGCTG...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTAGGAACCGCCCATCCTaGGCTTCATGCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVRNRPS*ASCQSR
Trigger: CCTGGACTGGCATGAAGCCCAGGATGGGCGGTTCCT...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAAACCTGGGCACTCCTTaGTACAGCCTGGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGNLGTP*YSLAPS
Trigger: GCTGGGGGCCAGGCTGTACCAAGGAGTGCCCAGGTT...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCACAATGGCCTTGGTaGACAGGAGCACAGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFPQWPW*TGAQCR
Trigger: ACGGCACTGTGCTCCTGTCCACCAAGGCCATTGTGG...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCGCTCCACAATGGCCTTaGTGGACAGGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFAPQWP*WTGAQC
Trigger: GCACTGTGCTCCTGTCCACCAAGGCCATTGTGGAGC...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAGCTGTGGTCTTCTCTaGCTCCACAATGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVSCGLL*LHNGLG
Trigger: ACCAAGGCCATTGTGGAGCCAGAGAAGACCACAGCT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAAAGTGTCAAGGTCCCTaGGCTGAACTGCAGGATGGT +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPKCQGP*AELQDG
Trigger: ACCATCCTGCAGTTCAGCTCAGGGACCTTGACACTT...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCAACTCTTTCAGCATTTTaGTGGCTGCGTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPTLSAF*WLRSSS
Trigger: TGAAGATGAACGCAGCCATCAAAATGCTGAAAGAGT...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCAATGCCCGCGTAAGTaGAGTTCTCAAACAGCGACA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVQCPRK*SSQTAT
Trigger: TGTCGCTGTTTGAGAACTTCACTTACGCGGGCATTG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCACTCCTTGTGCACACGTaGAGAAAGTACAGCGGTGTC +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPLLVHT*RKYSGV
Trigger: GACACCGCTGTACTTTCTGCACGTGTGCACAAGGAG...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTCAGATCACGTCTGTCTaGTTCTCCTTGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVQITSV*FSLCTR
Trigger: ACGTGTGCACAAGGAGAAGCAGACAGACGTGATCTG...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAGGGGAAGGGGTTCCCTaGAGCTGCACAGTTGATCCG +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGGEGVP*SCTVDP
Trigger: CGGATCAACTGTGCAGCTGCAGGGAACCCCTTCCCC...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACAGTGCCGTCTGGCTTaGGTAGCTCTATGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGQCRLA*VALCCP
Trigger: GGGGCAGCATAGAGCTACGCAAGCCAGACGGCACTG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGGCAGCTTCTGCGGATaGACACCAGGGTTAAAAGGG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGGSFCG*TPGLKG
Trigger: CCCTTTTAACCCTGGTGTGCATCCGCAGAAGCTGCC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGATGCAGGCAGCTTCTaGGGATGCACACCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGDAGSF*GCTPGL
Trigger: TAACCCTGGTGTGCATCCGCAGAAGCTGCCTGCATC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCACTCAGGTACTGCATaGCATTGGCCGCATCACTGG +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFHSGTA*HWPHHW
Trigger: CCAGTGATGCGGCCAATGGCATGCAGTACCTGAGTG...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTGTGTGTGACCTTGTCTaGAAGCAGGTGGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVVCDLV*KQVGSR
Trigger: CCTGGAGCCCACCTGCTTCCAGACAAGGTCACACAC...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCGATGCCGCTCGATGGTaGCTGCACATTTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTDAARW*LHIWEL
Trigger: CAGCTCCCAAATGTGCAGCCACCATCGAGCGGCATC...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCGTAGATGCCGCTCGATaGTGGCTGCACATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFVDAAR*WLHIWE
Trigger: CTCCCAAATGTGCAGCCACCATCGAGCGGCATCTAC...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCTCGCCGTCATGGTCGTaGCAGACACCTCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTSPSWS*QTPPCR
Trigger: CCTACATGGAGGTGTCTGCCACGACCATGACGGCGA...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAAGTGCAGGCGGACAGTaGAGATGGGTCCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGSAGGQ*RWVHPQ
Trigger: CTGGGGATGGACCCATCTCCACTGTCCGCCTGCACT...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCATGCTTCCATGTCAGCTaGATCTCGGAGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPCFHVS*ISESER
Trigger: CCTCTCAGACTCCGAGATCCAGCTGACATGGAAGCA...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACACGTCTATCCACAGTaGGTCTCCTGCACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGHVYPQ*VSCTPS
Trigger: GCTGGGGGTGCAGGAGACCCACTGTGGATAGACGTG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCGGTACTGCATGCCATTaGCCGCATCACTGGCGAAAC +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFGTACH*PHHWRN
Trigger: GTTTCGCCAGTGATGCGGCCAATGGCATGCAGTACC...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTTTGATGATGTTGGGGTaGTGCCCCAATTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVLMMLG*CPNLHR
Trigger: TCTGTGCAAATTGGGGCATCACCCCAACATCATCAA...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACCCTCCAACCACGGCTaGAACAAAGGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGPSNHG*NKGSGQ
Trigger: CTGTCCTGAGCCTTTGTTGCAGCCGTGGTTGGAGGG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCTGGCTTCCAGGTAAGTaGCACTGTAGATGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTWLPGK*HCRCRS
Trigger: CGAGCGGCATCTACAGTGCCACTTACCTGGAAGCCA...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCACGTCACGTTCTCACTaGGGTCCACCACAATGGTCG +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTTSRSH*GPPQWS
Trigger: CGACCATTGTGGTGGACCCCAGTGAGAACGTGACGT...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTCTTAAGCGAAGGAGCTaGAGTGGGGGTTTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGLKRRS*SGGLCW
Trigger: CCAACACAAACCCCCACTCCAGCTCCTTCGCTTAAG...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGTTGAACTCCAGTTCTaGGGCCATGTTGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGVELQF*GHVEDL
Trigger: CAGATCCTCAACATGGCCTCAGAACTGGAGTTCAAC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCTTCTCACTCAGGTACTaGATGCCATTGGCCGCATCA +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFFSLRY*MPLAAS
Trigger: TGATGCGGCCAATGGCATGCAGTACCTGAGTGAGAA...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCACCCGCAAAGTCACGATaGTCATTTTCAGAGGCATAC +
Preference number: 4 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPPAKSR*SFSEAY
Trigger: GTATGCCTCTGAAAATGACCATCGTGACTTTGCGGG...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTCGAAGTCTGCAATCTTaGAGGCTAGGTTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGRSLQS*RLGSLR
Trigger: TCGGAGAGAACCTAGCCTCCAAGATTGCAGACTTCG...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR TCA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCGCATCGTCTCTAAGTTaGACTCCAGTTCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTASSLS*TPVLRP
Trigger: TGGCCTCAGAACTGGAGTTCAACTTAGAGACGATGC...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCAGAAGTAGGATCCGTTaGTCTTCCAGATCACGTCTG +
Preference number: 4 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFRSRIR*SSRSRL
Trigger: CAGACGTGATCTGGAAGAGCAACGGATCCTACTTCT...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGACAAGCTTCTTGGCACTaGCTTCCTCTCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGQASWH*LPLQPD
Trigger: ATCTGGCTGGAGAGGAAGCCAGTGCCAAGAAGCTTG...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CCA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAGACATCACTCTTGGTaGTATAGACACTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVRHHSW*YRHCSS
Trigger: TGAACTACAGTGTCTATACCACCAAGAGTGATGTCT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR GCA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAGTCTGCTTCTCCTTGTaGACACGTGCAGAAAGTACA +
Preference number: 4 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGVCFSL*TRAEST
Trigger: TGTACTTTCTGCACGTGTGCACAAGGAGAAGCAGAC...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 90 bp CCCACGAGGTCCGAGGGCTTGGAGAAGCCGCGAAGCGTGACCTGGTaGGAACCGTTGCGCGCCAGGCGCAGGGGTGGCCCGGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: PTRSEGLEKPRSVTW*EPLRARRRGGPGGV
Trigger: CACCCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 90 bp ACGCCCACGAGGTCCGAGGGCTTGGAGAAGCCGCGAAGCGTGACCTaGTGCGAACCGTTGCGCGCCAGGCGCAGGGGTGGCCCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: TPTRSEGLEKPRSVT*CEPLRARRRGGPGG
Trigger: CCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGTGGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 90 bp GCGAAGCGTGACCTGGTGCGAACCGTTGCGCGCCAGGCGCAGGGGTaGCCCGGGCGGGGTGCGCACGATACGGTCGTCCTTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: AKRDLVRTVARQAQG*PGRGAHDTVVLLQQ
Trigger: CTGCTGGAGAAGGACGACCGTATCGTGCGCACCCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS TCA 90 bp CGGCCTCCCCAGACACGCAAGTCAGGAAGAAGCGCTGGGGGTCCGTaGGCCGCAGGTTGGCCAGCAGCGTCAGGTCCACCGCCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: RPPQTRKSGRSAGGP*AAGWPAASGPPPRP
Trigger: TGGGCGCGGCGGTGGACCTGACGCTGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGACTTGCGTGTCTGGGGAGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS TCA 90 bp AGAAGACGCCCACGAGGTCCGAGGGCTTGGAGAAGCCGCGAAGCGTaGCCTGGTGCGAACCGTTGCGCGCCAGGCGCAGGGGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RRRPRGPRAWRSREA*PGANRCAPGAGVAR
Trigger: CCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGTGGGCGTCTTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS TCA 90 bp CGGCCTCCCCAGACACGCAAGTCAGGAAGAAGCGCTGGGGGTCCGTaGGCCGCAGGTTGGCCAGCAGCGTCAGGTCCACCGCCGCGCCTG +
Preference number: 5 (lower is better)
Translates to: RPPQTRKSGRSAGGP*AAGWPAASGPPPRL
Trigger: CAGGCGCGGCGGTGGACCTGACGCTGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGACTTGCGTGTCTGGGGAGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485125.1
CDS CCA 90 bp CCGTGTCCCGTCCCACAGGCGCAGCAGGAAACCGTCGCCCACCAGTaGCCCGGGCACCAAGGGCAAGGACCAGCTCACTCGCAGCCGGTC +
Preference number: 5 (lower is better)
Translates to: PCPVPQAQQETVAHQ*PGHQGQGPAHSQPV
Trigger: GACCGGCTGCGAGTGAGCTGGTCCTTGCCCTTGGTGCCCGGGCCACTGGTGGGCGACGGTTTCCTGCTGCGCCTGTGGGACGGGACACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS TCA 90 bp GCTGCAAGCATGCACCCAGGGGCGGGGCGGGTCACTGACCGAGCCTaGCTGGTAGGTGAAGGTGCGTCTCCGATGCAGGCAGCTTCTGCG +
Preference number: 5 (lower is better)
Translates to: AASMHPGAGRVTDRA*LVGEGASPMQAASA
Trigger: CGCAGAAGCTGCCTGCATCGGAGACGCACCTTCACCTACCAGTCAGGCTCGGTCAGTGACCCGCCCCGCCCCTGGGTGCATGCTTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471187.1
CDS GCA 90 bp AGGCCCCGGCAGCCTGATATGCCTGGGCACTGCTCCTGGCAGCTCTaGCCAAAACGGCCCTCTCTGCAGGCCTGTTCACAGCGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: RPRQPDMPGHCSWQL*PKRPSLQACSQRVP
Trigger: TGGCACCCGCTGTGAACAGGCCTGCAGAGAGGGCCGTTTTGGGCAGAGCTGCCAGGAGCAGTGCCCAGGCATATCAGGCTGCCGGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000480269.1
ENST00000538015.1
CDS TCA 90 bp CCGGCTCTCTTGGACTGGGCCCTCAGCCTGCAGCCCTGGACACAGTaGGAGGGGCAGATTGTGGGGACACCTGGGTCAGGGAACCCAGAG +
Preference number: 5 (lower is better)
Translates to: PALLDWALSLQPWTQ*EGQIVGTPGSGNPE
Trigger: CTCTGGGTTCCCTGACCCAGGTGTCCCCACAATCTGCCCCTCTCACTGTGTCCAGGGCTGCAGGCTGAGGGCCCAGTCCAAGAGAGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 90 bp GCCCGGGCACCAAGGGCAAGGACCAGCTCACTCGCAGCCGGTCAGTaGCTTCCACATGCCAGCCCTCCAACCACGGCTGCAACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: ARAPRARTSSLAAGQ*LPHASPPTTAATKA
Trigger: AGCCTTTGTTGCAGCCGTGGTTGGAGGGCTGGCATGTGGAAGGCACTGACCGGCTGCGAGTGAGCTGGTCCTTGCCCTTGGTGCCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 90 bp AGGCCCTCTTCAGCTGCCCGGCTCTCTTGGACTGGGCCCTCAGCCTaGAGCCCTGGACACAGTGAGAGGGGCAGATTGTGGGGACACCTG +
Preference number: 5 (lower is better)
Translates to: RPSSAARLSWTGPSA*SPGHSERGRLWGHL
Trigger: CAGGTGTCCCCACAATCTGCCCCTCTCACTGTGTCCAGGGCTGCAGGCTGAGGGCCCAGTCCAAGAGAGCCGGGCAGCTGAAGAGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS TCA 90 bp AGAGGCTGGCTCCCGAGCCCAGGAAGGCCGAGCCTGACTGGTAGGTaGAGGTGCGTCTCCGATGCAGGCAGCTTCTGCGGATGCACACCA +
Preference number: 5 (lower is better)
Translates to: RGWLPSPGRPSLTGR*RCVSDAGSFCGCTP
Trigger: TGGTGTGCATCCGCAGAAGCTGCCTGCATCGGAGACGCACCTTCACCTACCAGTCAGGCTCGGCCTTCCTGGGCTCGGGAGCCAGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461061.1
CDS TCA 90 bp TGCAGTGGTAGAGCTGCACATCCAGCTGGTAGTGGGTGCCAGGCGTaGGTCCCGTCAGGAGGGCAGTGCGGGCCAGGACAGTCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: CSGRAAHPAGSGCQA*VPSGGQCGPGQSVV
Trigger: GACCACAGACTGTCCTGGCCCGCACTGCCCTCCTGACGGGACTCACGCCTGGCACCCACTACCAGCTGGATGTGCAGCTCTACCACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488437.1
CDS GCA 90 bp CCTCAGCCTGCAGCCCGTTGCCCAGGGTGGACTCTTCTACTGTGTTaGTCCAGTCCCCGAGCCCCTGAATGCTGGCCCGCATGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: PQPAARCPGWTLLLC*SSPRAPECWPACGR
Trigger: TCTTCCGCATGCGGGCCAGCATTCAGGGGCTCGGGGACTGGAGCAACACAGTAGAAGAGTCCACCCTGGGCAACGGGCTGCAGGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS GCA 90 bp GCCCTGCCCTCTCACCGTTGCCCAGGGTGGACTCTTCTACTGTGTTaGTCCAGTCCCCGAGCCCCTGAATGCTGGCCCGCATGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: ALPSHRCPGWTLLLC*SSPRAPECWPACGR
Trigger: TCTTCCGCATGCGGGCCAGCATTCAGGGGCTCGGGGACTGGAGCAACACAGTAGAAGAGTCCACCCTGGGCAACGGTGAGAGGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 90 bp TTGGATATTGGCCCAGGCAGAGCCTCCGGGTGCTTCCATGTCAGCTaGATCTCGGAGTCTGAGAGGGCCTGGGCGTGGAGGTGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: LDIGPGRASGCFHVS*ISESERAWAWRCRG
Trigger: CCCCCGACACCTCCACGCCCAGGCCCTCTCAGACTCCGAGATCCAGCTGACATGGAAGCACCCGGAGGCTCTGCCTGGGCCAATATCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 90 bp AGGCGCTGCCCAGGGGGCTGGCTTCCAGGTAAGTGGCACTGTAGATaGCGCTCGATGGTGGCTGCACATTTGGGAGCTGCAGCAGGAACC +
Preference number: 5 (lower is better)
Translates to: RRCPGGWLPGKWHCR*RSMVAAHLGAAAGT
Trigger: GGTTCCTGCTGCAGCTCCCAAATGTGCAGCCACCATCGAGCGGCATCTACAGTGCCACTTACCTGGAAGCCAGCCCCCTGGGCAGCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS GCA 90 bp ACCTCCACAACGTACTTGGATATTGGCCCAGGCAGAGCCTCCGGGTaGTTCCATGTCAGCTGGATCTCGGAGTCTGAGAGGGCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: TSTTYLDIGPGRASG*FHVSWISESERAWA
Trigger: CGCCCAGGCCCTCTCAGACTCCGAGATCCAGCTGACATGGAAGCACCCGGAGGCTCTGCCTGGGCCAATATCCAAGTACGTTGTGGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 90 bp CTGTCCACGTCTATCCACAGTGGGTCTCCTGCACCCCCAGCCACCTaGACCTCCACAACGTACTTGGATATTGGCCCAGGCAGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LSTSIHSGSPAPPAT*TSTTYLDIGPGRAS
Trigger: GGAGGCTCTGCCTGGGCCAATATCCAAGTACGTTGTGGAGGTGCAGGTGGCTGGGGGTGCAGGAGACCCACTGTGGATAGACGTGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS CCA 90 bp CGCAAGAACCAAGCGGGGCACCTCGAACTCAGCTGTGGTCTTCTCTaGCTCCACAATGGCCTTGGTGGACAGGAGCACAGTGCCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RKNQAGHLELSCGLL*LHNGLGGQEHSAVW
Trigger: CCAGACGGCACTGTGCTCCTGTCCACCAAGGCCATTGTGGAGCCAGAGAAGACCACAGCTGAGTTCGAGGTGCCCCGCTTGGTTCTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS-3UTR CAA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTACCTGGTGCGAACCGTaGCGCGCCAGGCGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVTWCEP*RARRRG
Trigger: ACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 90 bp CAGGTAAGTGGCACTGTAGATGCCGCTCGATGGTGGCTGCACATTTaGGAGCTGCAGCAGGAACCGCCCATCCTGGGCTTCATGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QVSGTVDAARWWLHI*ELQQEPPILGFMPV
Trigger: GACTGGCATGAAGCCCAGGATGGGCGGTTCCTGCTGCAGCTCCCAAATGTGCAGCCACCATCGAGCGGCATCTACAGTGCCACTTACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS GCA 90 bp GCTTGTCTCCTCAGGCCTGTCCACGTCTATCCACAGTGGGTCTCCTaGACCCCCAGCCACCTGCACCTCCACAACGTACTTGGATATTGG +
Preference number: 5 (lower is better)
Translates to: ACLLRPVHVYPQWVS*TPSHLHLHNVLGYW
Trigger: CCAATATCCAAGTACGTTGTGGAGGTGCAGGTGGCTGGGGGTGCAGGAGACCCACTGTGGATAGACGTGGACAGGCCTGAGGAGACAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS GCA 90 bp AGGTACTGCATGCCATTGGCCGCATCACTGGCGAAACGCAGCAGCTaGCGGGAGCTAAGGGTAGAGGCTGTCCCATGCTCTCGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: RYCMPLAASLAKRSS*RELRVEAVPCSRAK
Trigger: TTTTGCTCGAGAGCATGGGACAGCCTCTACCCTTAGCTCCCGGCAGCTGCTGCGTTTCGCCAGTGATGCGGCCAATGGCATGCAGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000473014.1
ENST00000492599.1
CDS CCA 90 bp GCGTTCATCTTCAGCCCGTCCTTCTTGATCATGGCCCGGATGACCTaGCCGAAGTTCCCCTCCCCGATGAGGTCCTCAAAGGTGATGTCC +
Preference number: 5 (lower is better)
Translates to: AFIFSPSFLIMARMT*PKFPSPMRSSKVMS
Trigger: GGACATCACCTTTGAGGACCTCATCGGGGAGGGGAACTTCGGCCAGGTCATCCGGGCCATGATCAAGAAGGACGGGCTGAAGATGAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000473014.1
CDS-3UTR CAA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCACGAGGTCCGAGGGCTaGGAGAAGCCGCGAAGCGTG +
Preference number: 5 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSTRSEG*EKPRSV
Trigger: CACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGT...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCATTCAGCCCGTCCTTCTaGATCATGGCCCGGATGACC +
Preference number: 5 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPFSPSF*IMARMT
Trigger: GGTCATCCGGGCCATGATCAAGAAGGACGGGCTGAA...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS TCA 90 bp GTCAGGGAACCCAGAGGCCACCATGGGGTTACACAGAGGGAGAGGTaGAAGATCCCAGTGCCAGGACTGTCAGGAAATCACTTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VREPRGHHGVTQRER*KIPVPGLSGNHLGH
Trigger: GTGGCCCAAGTGATTTCCTGACAGTCCTGGCACTGGGATCTTTCACCTCTCCCTCTGTGTAACCCCATGGTGGCCTCTGGGTTCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS TCA 90 bp CCTGTGGGGCAGGGCCAGGCACAAGCCCTAAGGGTGAGGGTTGAATaGGACTCACCATCGTCTTCTTCACATAAACCTCCTCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: PVGQGQAQALRVRVE*DSPSSSSHKPPLPE
Trigger: CTCGGGGAGAGGAGGTTTATGTGAAGAAGACGATGGTGAGTCTCATTCAACCCTCACCCTTAGGGCTTGTGCCTGGCCCTGCCCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492599.1
CDS-3UTR CAA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAAGCTGGCGGCTCTGCTaGGTCAGGAGCCGAGGTGCA +
Preference number: 5 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPSWRLC*VRSRGA
Trigger: TGCACCTCGGCTCCTGACCAAGCAGAGCCGCCAGCT...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCAGCTGGAGTGGGGGTTaGTGTTGGGGGAGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSSWSGG*CWGSSG
Trigger: CCCACTGCTCCCCCAACACAAACCCCCACTCCAGCT...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 90 bp GAAATAACTCTGGAGAAAGGGCTGGCAAGGGCTGGGGTCAATTGCTaGAGGAAGCCAGGTGGGGCCTGGGATTTGTGGGACAAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: EITLEKGLARAGVNC*RKPGGAWDLWDKGE
Trigger: CTCTCCTTTGTCCCACAAATCCCAGGCCCCACCTGGCTTCCTCCAGCAATTGACCCCAGCCCTTGCCAGCCCTTTCTCCAGAGTTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS-3UTR CAA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTTCCGTGAGCCGCAGGTaGGCCAGCAGCGTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVSVSRR*ASSVRS
Trigger: GGACCTGACGCTGCTGGCCAACCTGCGGCTCACGGA...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCAGCTGCCCGGCTCTCTaGGACTGGGCCCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTSCPAL*DWALSL
Trigger: CAGGCTGAGGGCCCAGTCCAAGAGAGCCGGGCAGCT...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTCCGAAGTCTGCAATCTaGGAGGCTAGGTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVPKSAI*EARFSP
Trigger: CGGAGAGAACCTAGCCTCCAAGATTGCAGACTTCGG...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS TCA 90 bp CACGTGCAGAAAGTACAGCGGTGTCACCTTTGTTCACAGTGTGTGTaGCCTTGTCTGGAAGCAGGTGGGCTCCAGGGCTGTTGTGCACGT +
Preference number: 5 (lower is better)
Translates to: HVQKVQRCHLCSQCV*PCLEAGGLQGCCAR
Trigger: ACGTGCACAACAGCCCTGGAGCCCACCTGCTTCCAGACAAGGTCACACACACTGTGAACAAAGGTGACACCGCTGTACTTTCTGCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS GCA 90 bp TGTCTAGGTCAGGCCTGGGTGATTCTTGGGGGCCAAGCCCTCCTGTaGCCTCTCATCTCACACTCACACATCACTCTTGGTGGTATAGAC +
Preference number: 5 (lower is better)
Translates to: CLGQAWVILGGQALL*PLISHSHITLGGID
Trigger: GTCTATACCACCAAGAGTGATGTGTGAGTGTGAGATGAGAGGGCACAGGAGGGCTTGGCCCCCAAGAATCACCCAGGCCTGACCTAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 90 bp ACACGTGACCACCAAAGCGCCCCTCATCCGTGTTCTGTTTCTCAGTaGAGGTATCTACCCAGTCCCTCCAGCCTGACTTCTCACAGTGCA +
Preference number: 5 (lower is better)
Translates to: TRDHQSAPHPCSVSQ*RYLPSPSSLTSHSA
Trigger: TGCACTGTGAGAAGTCAGGCTGGAGGGACTGGGTAGATACCTCCACTGAGAAACAGAACACGGATGAGGGGCGCTTTGGTGGTCACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538015.1
CDS-3UTR CAA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCAACCTGGGCACTCCTaGGTACAGCCTGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVQPGHS*VQPGPQ
Trigger: CTGGGGGCCAGGCTGTACCAAGGAGTGCCCAGGTTG...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTTGTGTTAGGGGCACAAGCTTCTaGGCACTGGCTTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: VSGVSAGLSEGAGVGVCVRGTSF*ALASSP
Trigger: TGGAGAGGAAGCCAGTGCCAAGAAGCTTGTGCCCCT...AACACAAACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCAGTTCTGAGGCCATGTaGAGGATCTGGGGGATCCGG +
Preference number: 5 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSSSEAM*RIWGIR
Trigger: CCGGATCCCCCAGATCCTCAACATGGCCTCAGAACT...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAGGCTCCACAATGGCCTaGGTGGACAGGAGCACAGTG +
Preference number: 5 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPGSTMA*VDRSTV
Trigger: CACTGTGCTCCTGTCCACCAAGGCCATTGTGGAGCC...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GGGCATGTTAGTGGTGTGAGTGCTGGCTTAAGCGAAGGAGCTGGAGTGGGGGTTACTTTCACATTGACCTaGAAGCGCCGGCTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: GHVSGVSAGLSEGAGVGVTFTLT*KRRLSW
Trigger: CCAAGACAGCCGGCGCTTCAAGGTCAATGTGAAAGT...AACCCCCACTCCAGCTCCTTCGCTTAAGCCAGCACTCACACCACTAACATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS TCA 90 bp TGGCAGCTCAGGCCTCCTCAGCTGTGGCATCAATGCCCGCGTAAGTaGAGTTCTCAAACAGCGACATGTTCACATAGGCCTTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: WQLRPPQLWHQCPRK*SSQTATCSHRPSWL
Trigger: AAGCCAGGAAGGCCTATGTGAACATGTCGCTGTTTGAGAACTTCACTTACGCGGGCATTGATGCCACAGCTGAGGAGGCCTGAGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCACAGTGTGTGTGACCTaGTCTGGAAGCAGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: VRGCKGQTGHRLDSRVCSTVCVT*SGSRWA
Trigger: AGCCCACCTGCTTCCAGACAAGGTCACACACACTGT...GGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCCTTACAGCCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCTGCAGCTGCACAGTaGATCCGGGGCATCGTCTCT +
Preference number: 5 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFPAAAQ*IRGIVS
Trigger: AGAGACGATGCCCCGGATCAACTGTGCAGCTGCAGG...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GAACTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAGAAGCGCCGGCTGTCTaGGCCGCCAGATGTGGACAC +
Preference number: 5 (lower is better)
Translates to: ELERRMPRIAMRHLQSMGEAPAV*AARCGH
Trigger: GTGTCCACATCTGGCGGCCAAGACAGCCGGCGCTTC...TCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp GGGTCAGACTGGTCACAGGTTAGACAGCAGAGTTTGCTCCGGCCAGCAGAGCCACACTGTATCCTGTCTTaGGCCTCAGGTTCATTAACG +
Preference number: 5 (lower is better)
Translates to: GSDWSQVRQQSLLRPAEPHCILS*ASGSLT
Trigger: CGTTAATGAACCTGAGGCCAAAGACAGGATACAGTG...TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAACCTGTGACCAGTCTGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGACTCTTCTACTGTGTaGCTCCAGTCCCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGDSSTV*LQSPSP
Trigger: GGGGCTCGGGGACTGGAGCAACACAGTAGAAGAGTC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAGTTAGACAGCAGAGTTaGCTCCGGCCAGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPVRQQS*LRPAEP
Trigger: TGGCTCTGCTGGCCGGAGCAAACTCTGCTGTCTAAC...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS TCA 90 bp GTAAGATCCTCAGGTGGGCATGACCTTGCCCTTCAGGGAGGAAGATaGGAGCAATTCCTGAGTGGCCTCTCCATCTACCTCAGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: VRSSGGHDLALQGGR*EQFLSGLSIYLRKH
Trigger: ATGCTTCCTGAGGTAGATGGAGAGGCCACTCAGGAATTGCTCTCATCTTCCTCCCTGAAGGGCAAGGTCATGCCCACCTGAGGATCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS-3UTR CAA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTACAGTGCCGTCTGGCTaGCGTAGCTCTATGCTGCCC +
Preference number: 5 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVTVPSG*RSSMLP
Trigger: GGGCAGCATAGAGCTACGCAAGCCAGACGGCACTGT...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp AAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTGGGGGCACTTTCACATaGACCTTGAAGCGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: KKDAQDSYETPTKHGNPVGGTFT*TLKRRL
Trigger: CAGCCGGCGCTTCAAGGTCAATGTGAAAGTGCCCCC...AACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTCAACGTACTTGGATATaGGCCCAGGCAGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGQRTWI*AQAEPP
Trigger: CGGAGGCTCTGCCTGGGCCAATATCCAAGTACGTTG...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 90 bp TATTATTTTGCCAGAAATAACTCTGGAGAAAGGGCTGGCAAGGGCTaGGGTCAATTGCTGGAGGAAGCCAGGTGGGGCCTGGGATTTGTG +
Preference number: 5 (lower is better)
Translates to: YYFARNNSGERAGKG*GQLLEEARWGLGFV
Trigger: CACAAATCCCAGGCCCCACCTGGCTTCCTCCAGCAATTGACCCCAGCCCTTGCCAGCCCTTTCTCCAGAGTTATTTCTGGCAAAATAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS-3UTR CAA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCAACAGCGGTGTCACCTTaGTTCACAGTGTGTGTGACC +
Preference number: 5 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPTAVSP*FTVCVT
Trigger: GGTCACACACACTGTGAACAAAGGTGACACCGCTGT...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 90 bp GTTGCTCTTCCAGATCACGTCTGTCTGCTTCTCCTTGTGCACACGTaGAGAAAGTACAGCGGTGTCACCTTTGTTCACAGTGTGTGTGAC +
Preference number: 5 (lower is better)
Translates to: VALPDHVCLLLLVHT*RKYSGVTFVHSVCD
Trigger: GTCACACACACTGTGAACAAAGGTGACACCGCTGTACTTTCTGCACGTGTGCACAAGGAGAAGCAGACAGACGTGATCTGGAAGAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS-3UTR CAA 90 bp CAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCCCCTAAGCCCATCTGTCTGCTTCTCCTaGTGCACACGTGCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: QDSYETPTKHGNPVPLSPSVCFS*CTRAES
Trigger: ACTTTCTGCACGTGTGCACAAGGAGAAGCAGACAGA...TGGGCTTAGGGGAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp AATTCCTTGAGGCAGCTTAAGTCAGAGGCTGTAAGGGTCAGACTGGTCACAGGTGGCATCGTCTCTAAGTaGAACTCCAGTTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: NSLRQLKSEAVRVRLVTGGIVSK*NSSSEA
Trigger: GGCCTCAGAACTGGAGTTCAACTTAGAGACGATGCC...ACCTGTGACCAGTCTGACCCTTACAGCCTCTGACTTAAGCTGCCTCAAGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp AGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCCAGTTCACCTCCACAACGTACTaGGATATTGGCCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RRMPRIAMRHLQSMGTQFTSTTY*DIGPGR
Trigger: TCTGCCTGGGCCAATATCCAAGTACGTTGTGGAGGT...GAACTGGGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS-3UTR CAA 90 bp CTAGAAAGAAGGATGCCCAGGATAGCTATGAGACACCTACAAAGCATGGGAACCAGGTACTGCATGCCATaGGCCGCATCACTGGCGAAA +
Preference number: 5 (lower is better)
Translates to: LERRMPRIAMRHLQSMGTRYCMP*AASLAK
Trigger: TTTCGCCAGTGATGCGGCCAATGGCATGCAGTACCT...GGTTCCCATGCTTTGTAGGTGTCTCATAGCTATCCTGGGCATCCTTCTTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 90 bp CAGAGCAAGCGTTCCAACTCAGGCTCCAAAGCTCTTACTCTTGACTaGATCTCACACTTTAACAGCCTCTGTGTAGTGTGCATCAGCCCT +
Preference number: 5 (lower is better)
Translates to: QSKRSNSGSKALTLD*ISHFNSLCVVCISP
Trigger: AGGGCTGATGCACACTACACAGAGGCTGTTAAAGTGTGAGATGCAGTCAAGAGTAAGAGCTTTGGAGCCTGAGTTGGAACGCTTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473014.1
ENST00000492874.1
CDS TCA 90 bp TTACACAAACATAATCCGAAACTACCTTTACCCCAGTCCTATTCCTaGAACACCTTCCAAGACTCCTTCCAGCAAGCCCCACCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: LHKHNPKLPLPQSYS*NTFQDSFQQAPPWL
Trigger: TAGCCAAGGTGGGGCTTGCTGGAAGGAGTCTTGGAAGGTGTTTCAGGAATAGGACTGGGGTAAAGGTAGTTTCGGATTATGTTTGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 90 bp GCCACCACAGCCAGCCGAGCTAACATTTTTATTGAGCACTTACCGTaGTCCAGGCCCTGGTCATTTAACAGACATGTTAATTCATTTAAC +
Preference number: 5 (lower is better)
Translates to: ATTASRANIFIEHLP*SRPWSFNRHVNSFN
Trigger: GTTAAATGAATTAACATGTCTGTTAAATGACCAGGGCCTGGACCACGGTAAGTGCTCAATAAAAATGTTAGCTCGGCTGGCTGTGGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 72 bp CGTTGCGCGCCAGGCGCAGGGGTGGCCCGGGCGGGGTaGGCACGATACGGTCGTCCTTCTCCAGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: RCAPGAGVARAG*ARYGRPSPAAG
Trigger: CCCTGCTGCTGGAGAAGGACGACCGTATCGTGCGCACCCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp GACCTGGTGCGAACCGTTGCGCGCCAGGCGCAGGGGTaGCCCGGGCGGGGTGCGCACGATACGGTCGTCCTT +
Preference number: 6 (lower is better)
Translates to: DLVRTVARQAQG*PGRGAHDTVVL
Trigger: AAGGACGACCGTATCGTGCGCACCCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp CCAGGCGTGAGTCCCGTCAGGAGGGCAGTGCGGGCCTaGGGGGATGAGACGTTCTCCCGCCGCTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PGVSPVRRAVRA*GDETFSRRSCP
Trigger: GGGGCAGGAGCGGCGGGAGAACGTCTCATCCCCCCAGGCCCGCACTGCCCTCCTGACGGGACTCACGCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CAA 72 bp TTGGAGAAGCCGCGAAGCGTGACCTGGTGCGAACCGTaGCGCGCCAGGCGCAGGGGTGGCCCGGGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: LEKPRSVTWCEP*RARRRGGPGGV
Trigger: CACCCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CAA 90 bp TCCGAGGGCTTGGAGAAGCCGCGAAGCGTGACCTGGTGCGAACCGTaGCGCGCCAGGCGCAGGGGTGGCCCGGGCGGGGTGCGCACGATA +
Preference number: 6 (lower is better)
Translates to: SEGLEKPRSVTWCEP*RARRRGGPGGVRTI
Trigger: TATCGTGCGCACCCCGCCCGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS GCA 72 bp TCCGAGGGCTTGGAGAAGCCGCGAAGCGTGACCTGGTaGGAACCGTTGCGCGCCAGGCGCAGGGGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: SEGLEKPRSVTW*EPLRARRRGGP
Trigger: CGGGCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS TCA 72 bp CCACGAGGTCCGAGGGCTTGGAGAAGCCGCGAAGCGTaGCCTGGTGCGAACCGTTGCGCGCCAGGCGCAGGG +
Preference number: 6 (lower is better)
Translates to: PRGPRAWRSREA*PGANRCAPGAG
Trigger: CCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp AGGTCCGAGGGCTTGGAGAAGCCGCGAAGCGTGACCTaGTGCGAACCGTTGCGCGCCAGGCGCAGGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RSEGLEKPRSVT*CEPLRARRRGG
Trigger: GCCACCCCTGCGCCTGGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp AGACCAGCGGGGAGACCACAAGCTGGCGGCTCTGCTTaGTCAGGAGCCGAGGTGCAGCCAGGGGCACGGGGG +
Preference number: 6 (lower is better)
Translates to: RPAGRPQAGGSA*SGAEVQPGARG
Trigger: CCCCCGTGCCCCTGGCTGCACCTCGGCTCCTGACCAAGCAGAGCCGCCAGCTTGTGGTCTCCCCGCTGGTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS CAA 72 bp GTCAGGAAGAAGCGCTGGGGGTCCGTGAGCCGCAGGTaGGCCAGCAGCGTCAGGTCCACCGCCGCGCCCACA +
Preference number: 6 (lower is better)
Translates to: VRKKRWGSVSRR*ASSVRSTAAPT
Trigger: TGTGGGCGCGGCGGTGGACCTGACGCTGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS CAA 72 bp GAGACCAGCGGGGAGACCACAAGCTGGCGGCTCTGCTaGGTCAGGAGCCGAGGTGCAGCCAGGGGCACGGGG +
Preference number: 6 (lower is better)
Translates to: ETSGETTSWRLC*VRSRGAARGTG
Trigger: CCCCGTGCCCCTGGCTGCACCTCGGCTCCTGACCAAGCAGAGCCGCCAGCTTGTGGTCTCCCCGCTGGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS CAA 72 bp GTCAGGAAGAAGCGCTGGGGGTCCGTGAGCCGCAGGTaGGCCAGCAGCGTCAGGTCCACCGCCGCGCCTGAG +
Preference number: 6 (lower is better)
Translates to: VRKKRWGSVSRR*ASSVRSTAAPE
Trigger: CTCAGGCGCGGCGGTGGACCTGACGCTGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485125.1
CDS CAA 90 bp CCAGCACCGCCCACGCAGGAGAAGACGCCCACGAGGTCCGAGGGCTaGGAGAAGCCGCGAAGCGTGACCTGGTGCGAACCGTTGCGCGCC +
Preference number: 6 (lower is better)
Translates to: PAPPTQEKTPTRSEG*EKPRSVTWCEPLRA
Trigger: GGCGCGCAACGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGTGGGCGTCTTCTCCTGCGTGGGCGGTGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp CCGGCCTCCCCAGACACGCAAGTCAGGAAGAAGCGCTaGGGGTCCGTGAGCCGCAGGTTGGCCAGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: PASPDTQVRKKR*GSVSRRLASSV
Trigger: GACGCTGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGACTTGCGTGTCTGGGGAGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp GTCCCACAGGCGCAGCAGGAAACCGTCGCCCACCAGTaGCCCGGGCACCAAGGGCAAGGACCAGCTCACTCG +
Preference number: 6 (lower is better)
Translates to: VPQAQQETVAHQ*PGHQGQGPAHS
Trigger: CGAGTGAGCTGGTCCTTGCCCTTGGTGCCCGGGCCACTGGTGGGCGACGGTTTCCTGCTGCGCCTGTGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 72 bp GGCCCAGGCAGAGCCTCCGGGTGCTTCCATGTCAGCTaGATCTCGGAGTCTGAGAGGGCCTGGGCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: GPGRASGCFHVS*ISESERAWAWR
Trigger: CCTCCACGCCCAGGCCCTCTCAGACTCCGAGATCCAGCTGACATGGAAGCACCCGGAGGCTCTGCCTGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CAA 72 bp CCCACGCAGGAGAAGACGCCCACGAGGTCCGAGGGCTaGGAGAAGCCGCGAAGCGTGACCTGGTGCGAACCG +
Preference number: 6 (lower is better)
Translates to: PTQEKTPTRSEG*EKPRSVTWCEP
Trigger: CGGTTCGCACCAGGTCACGCTTCGCGGCTTCTCCAAGCCCTCGGACCTCGTGGGCGTCTTCTCCTGCGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CAA 72 bp CTGCTGATCCAGGCCCTCTTCAGCTGCCCGGCTCTCTaGGACTGGGCCCTCAGCCTGCAGCCCGTTGCCCAG +
Preference number: 6 (lower is better)
Translates to: LLIQALFSCPAL*DWALSLQPVAQ
Trigger: CTGGGCAACGGGCTGCAGGCTGAGGGCCCAGTCCAAGAGAGCCGGGCAGCTGAAGAGGGCCTGGATCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS TCA 72 bp CAGACACGCAAGTCAGGAAGAAGCGCTGGGGGTCCGTaGGCCGCAGGTTGGCCAGCAGCGTCAGGTCCACCG +
Preference number: 6 (lower is better)
Translates to: QTRKSGRSAGGP*AAGWPAASGPP
Trigger: CGGTGGACCTGACGCTGCTGGCCAACCTGCGGCTCACGGACCCCCAGCGCTTCTTCCTGACTTGCGTGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS TCA 72 bp ATGCACCCAGGGGCGGGGCGGGTCACTGACCGAGCCTaGCTGGTAGGTGAAGGTGCGTCTCCGATGCAGGCA +
Preference number: 6 (lower is better)
Translates to: MHPGAGRVTDRA*LVGEGASPMQA
Trigger: TGCCTGCATCGGAGACGCACCTTCACCTACCAGTCAGGCTCGGTCAGTGACCCGCCCCGCCCCTGGGTGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471187.1
CDS TCA 72 bp AGAGCTGCACATCCAGCTGGTAGTGGGTGCCAGGCGTaGGTCCCGTCAGGAGGGCAGTGCGGGCCAGGACAG +
Preference number: 6 (lower is better)
Translates to: RAAHPAGSGCQA*VPSGGQCGPGQ
Trigger: CTGTCCTGGCCCGCACTGCCCTCCTGACGGGACTCACGCCTGGCACCCACTACCAGCTGGATGTGCAGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488437.1
CDS GCA 72 bp GGAGCACAGTGCCGTCTGGCTTGCGTAGCTCTATGCTaGCCCGCACGGGGAAGGGGTTCCCTGCAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: GAQCRLACVALC*PARGRGSLQLH
Trigger: GTGCAGCTGCAGGGAACCCCTTCCCCGTGCGGGGCAGCATAGAGCTACGCAAGCCAGACGGCACTGTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS CCA 72 bp TCCCCAGAGAACGAGACCAGCGGGGAGACCACAAGCTaGCGGCTCTGCTTGGTCAGGAGCCGAGGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SPENETSGETTS*RLCLVRSRGAA
Trigger: GGCTGCACCTCGGCTCCTGACCAAGCAGAGCCGCCAGCTTGTGGTCTCCCCGCTGGTCTCGTTCTCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS CAA 72 bp CTGCTGATCCAGGCCCTCTTCAGCTGCCCGGCTCTCTaGGACTGGGCCCTCAGCCTGCAGCCCTGGACACAG +
Preference number: 6 (lower is better)
Translates to: LLIQALFSCPAL*DWALSLQPWTQ
Trigger: CTGTGTCCAGGGCTGCAGGCTGAGGGCCCAGTCCAAGAGAGCCGGGCAGCTGAAGAGGGCCTGGATCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS TCA 72 bp CTCCCGAGCCCAGGAAGGCCGAGCCTGACTGGTAGGTaGAGGTGCGTCTCCGATGCAGGCAGCTTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: LPSPGRPSLTGR*RCVSDAGSFCG
Trigger: TCCGCAGAAGCTGCCTGCATCGGAGACGCACCTTCACCTACCAGTCAGGCTCGGCCTTCCTGGGCTCGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461061.1
CDS TCA 72 bp TTGGACTGGGCCCTCAGCCTGCAGCCCTGGACACAGTaGGAGGGGCAGATTGTGGGGACACCTGGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LDWALSLQPWTQ*EGQIVGTPGSG
Trigger: CCCTGACCCAGGTGTCCCCACAATCTGCCCCTCTCACTGTGTCCAGGGCTGCAGGCTGAGGGCCCAGTCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 72 bp CCAAGGGCAAGGACCAGCTCACTCGCAGCCGGTCAGTaGCTTCCACATGCCAGCCCTCCAACCACGGCTGCA +
Preference number: 6 (lower is better)
Translates to: PRARTSSLAAGQ*LPHASPPTTAA
Trigger: TGCAGCCGTGGTTGGAGGGCTGGCATGTGGAAGGCACTGACCGGCTGCGAGTGAGCTGGTCCTTGCCCTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 72 bp GCAGCCCGTTGCCCAGGGTGGACTCTTCTACTGTGTTaGTCCAGTCCCCGAGCCCCTGAATGCTGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: AARCPGWTLLLC*SSPRAPECWPA
Trigger: TGCGGGCCAGCATTCAGGGGCTCGGGGACTGGAGCAACACAGTAGAAGAGTCCACCCTGGGCAACGGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS CCA 72 bp CTACTGTGTTGCTCCAGTCCCCGAGCCCCTGAATGCTaGCCCGCATGCGGAAGAGGTAGCGCGTGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: LLCCSSPRAPEC*PACGRGSACWR
Trigger: ACGCCAGCACGCGCTACCTCTTCCGCATGCGGGCCAGCATTCAGGGGCTCGGGGACTGGAGCAACACAGTAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
ENST00000473014.1
CDS CCA 72 bp GTCCTGTGGGCCCTGCCCTCTCACCGTTGCCCAGGGTaGACTCTTCTACTGTGTTGCTCCAGTCCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: VLWALPSHRCPG*TLLLCCSSPRA
Trigger: GGCTCGGGGACTGGAGCAACACAGTAGAAGAGTCCACCCTGGGCAACGGTGAGAGGGCAGGGCCCACAGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 72 bp ATGGCCTTGGTGGACAGGAGCACAGTGCCGTCTGGCTaGCGTAGCTCTATGCTGCCCCGCACGGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: MALVDRSTVPSG*RSSMLPRTGKG
Trigger: CCCCTTCCCCGTGCGGGGCAGCATAGAGCTACGCAAGCCAGACGGCACTGTGCTCCTGTCCACCAAGGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS TCA 72 bp GCAGGATGGTCTCCTCGCCCGAGCCTGACTGGTAGGTaGAGGTGCGTCTCCGATGCAGGCAGCTTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: AGWSPRPSLTGR*RCVSDAGSFCG
Trigger: TCCGCAGAAGCTGCCTGCATCGGAGACGCACCTTCACCTACCAGTCAGGCTCGGGCGAGGAGACCATCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000473014.1
CDS GCA 72 bp CTTCTACTGTGTTGCTCCAGTCCCCGAGCCCCTGAATaGTGGCCCGCATGCGGAAGAGGTAGCGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LLLCCSSPRAPE*WPACGRGSACW
Trigger: CCAGCACGCGCTACCTCTTCCGCATGCGGGCCAGCATTCAGGGGCTCGGGGACTGGAGCAACACAGTAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
ENST00000473014.1
CDS CCA 72 bp TGGTACTGTCCTGGGGCCGGTAGTGCAGGCGGACAGTaGAGATGGGTCCATCCCCAGAGAACGAGACCAGCG +
Preference number: 6 (lower is better)
Translates to: WYCPGAGSAGGQ*RWVHPQRTRPA
Trigger: CGCTGGTCTCGTTCTCTGGGGATGGACCCATCTCCACTGTCCGCCTGCACTACCGGCCCCAGGACAGTACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS TCA 72 bp CTGCAGTTTTGGCCGCCGGGTAAGTGTCAAGGTCCCTaGGCTGAACTGCAGGATGGTCTCCTCGCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: LQFWPPGKCQGP*AELQDGLLARA
Trigger: GGCTCGGGCGAGGAGACCATCCTGCAGTTCAGCTCAGGGACCTTGACACTTACCCGGCGGCCAAAACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000473014.1
CDS GCA 72 bp CAGCCTGATATGCCTGGGCACTGCTCCTGGCAGCTCTaGCCAAAACGGCCCTCTCTGCAGGCCTGTTCACAG +
Preference number: 6 (lower is better)
Translates to: QPDMPGHCSWQL*PKRPSLQACSQ
Trigger: CTGTGAACAGGCCTGCAGAGAGGGCCGTTTTGGGCAGAGCTGCCAGGAGCAGTGCCCAGGCATATCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000480269.1
ENST00000538015.1
CDS GCA 72 bp TCTCACCGTTGCCCAGGGTGGACTCTTCTACTGTGTTaGTCCAGTCCCCGAGCCCCTGAATGCTGGCCCGCA +
Preference number: 6 (lower is better)
Translates to: SHRCPGWTLLLC*SSPRAPECWPA
Trigger: TGCGGGCCAGCATTCAGGGGCTCGGGGACTGGAGCAACACAGTAGAAGAGTCCACCCTGGGCAACGGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 72 bp TCTCACTGGGGTCCACCACAATGGTCGACCAGTCCATaGTACTGTCCTGGGGCCGGTAGTGCAGGCGGACAG +
Preference number: 6 (lower is better)
Translates to: SHWGPPQWSTSP*YCPGAGSAGGQ
Trigger: CTGTCCGCCTGCACTACCGGCCCCAGGACAGTACCATGGACTGGTCGACCATTGTGGTGGACCCCAGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS TCA 72 bp GGGTGGGAGCAGGCACCCGATGGTAACAGACAGGGATaGAGGAGGATCAAGGGTGGTGCACAGGTCACCAGC +
Preference number: 6 (lower is better)
Translates to: GWEQAPDGNRQG*RRIKGGAQVTS
Trigger: GCTGGTGACCTGTGCACCACCCTTGATCCTCCTTCATCCCTGTCTGTTACCATCGGGTGCCTGCTCCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 72 bp CCAGGGGGCTGGCTTCCAGGTAAGTGGCACTGTAGATaGCGCTCGATGGTGGCTGCACATTTGGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: PGGWLPGKWHCR*RSMVAAHLGAA
Trigger: TGCAGCTCCCAAATGTGCAGCCACCATCGAGCGGCATCTACAGTGCCACTTACCTGGAAGCCAGCCCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS GCA 72 bp TGGGGGATCCGGTCTGACTTCTCACAGTGCACTCCATaGCACCCAGAGGGGCAGACACAACCACTGAACCGG +
Preference number: 6 (lower is better)
Translates to: WGIRSDFSQCTP*HPEGQTQPLNR
Trigger: CCGGTTCAGTGGTTGTGTCTGCCCCTCTGGGTGGCATGGAGTGCACTGTGAGAAGTCAGACCGGATCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 72 bp ATGCCATTGGCCGCATCACTGGCGAAACGCAGCAGCTaGCGGGAGCTAAGGGTAGAGGCTGTCCCATGCTCT +
Preference number: 6 (lower is better)
Translates to: MPLAASLAKRSS*RELRVEAVPCS
Trigger: AGAGCATGGGACAGCCTCTACCCTTAGCTCCCGGCAGCTGCTGCGTTTCGCCAGTGATGCGGCCAATGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000473014.1
ENST00000492599.1
CDS CCA 72 bp CCCAGCCACCTGCACCTCCACAACGTACTTGGATATTaGCCCAGGCAGAGCCTCCGGGTGCTTCCATGTCAG +
Preference number: 6 (lower is better)
Translates to: PSHLHLHNVLGY*PRQSLRVLPCQ
Trigger: CTGACATGGAAGCACCCGGAGGCTCTGCCTGGGCCAATATCCAAGTACGTTGTGGAGGTGCAGGTGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS CCA 72 bp GCCTGGGATTTGTGGGACAAAGGAGAGCATCAGGGCTaGGCCAGGGGTCGCCCCAGTGGACCTTTCAGCATT +
Preference number: 6 (lower is better)
Translates to: AWDLWDKGEHQG*ARGRPSGPFSI
Trigger: AATGCTGAAAGGTCCACTGGGGCGACCCCTGGCCCAGCCCTGATGCTCTCCTTTGTCCCACAAATCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 72 bp GCTGGGGTCAATTGCTGGAGGAAGCCAGGTGGGGCCTaGGATTTGTGGGACAAAGGAGAGCATCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: AGVNCWRKPGGA*DLWDKGEHQGW
Trigger: CCAGCCCTGATGCTCTCCTTTGTCCCACAAATCCCAGGCCCCACCTGGCTTCCTCCAGCAATTGACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 72 bp CCCCAGCCACCTGCACCTCCACAACGTACTTGGATATaGGCCCAGGCAGAGCCTCCGGGTGCTTCCATGTCA +
Preference number: 6 (lower is better)
Translates to: PQPPAPPQRTWI*AQAEPPGASMS
Trigger: TGACATGGAAGCACCCGGAGGCTCTGCCTGGGCCAATATCCAAGTACGTTGTGGAGGTGCAGGTGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000461061.1
ENST00000471187.1
CDS GCA 72 bp AGCAGCTGCCGGGAGCTAAGGGTAGAGGCTGTCCCATaGTCTCGAGCAAAAGCTGGGTCAGTCTCTAGGACC +
Preference number: 6 (lower is better)
Translates to: SSCRELRVEAVP*SRAKAGSVSRT
Trigger: GGTCCTAGAGACTGACCCAGCTTTTGCTCGAGAGCATGGGACAGCCTCTACCCTTAGCTCCCGGCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000473014.1
ENST00000492599.1
CDS GCA 72 bp GCGACATGTTCACATAGGCCTTCCTGGCTTCCAGCATaGGGCCTAGCTGTAGCGCAATCTGGGCAAAGGGGG +
Preference number: 6 (lower is better)
Translates to: ATCSHRPSWLPA*GLAVAQSGQRG
Trigger: CCCCCTTTGCCCAGATTGCGCTACAGCTAGGCCGCATGCTGGAAGCCAGGAAGGCCTATGTGAACATGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 72 bp TTCCAGGTAAGTGGCACTGTAGATGCCGCTCGATGGTaGCTGCACATTTGGGAGCTGCAGCAGGAACCGCCC +
Preference number: 6 (lower is better)
Translates to: FQVSGTVDAARW*LHIWELQQEPP
Trigger: GGGCGGTTCCTGCTGCAGCTCCCAAATGTGCAGCCACCATCGAGCGGCATCTACAGTGCCACTTACCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS CCA 72 bp TTCAGCCCGTCCTTCTTGATCATGGCCCGGATGACCTaGCCGAAGTTCCCCTCCCCGATGAGGTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: FSPSFLIMARMT*PKFPSPMRSSK
Trigger: CTTTGAGGACCTCATCGGGGAGGGGAACTTCGGCCAGGTCATCCGGGCCATGATCAAGAAGGACGGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000473014.1
CDS CCA 72 bp GCCAGAAATAACTCTGGAGAAAGGGCTGGCAAGGGCTaGGGTCAATTGCTGGAGGAAGCCAGGTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: ARNNSGERAGKG*GQLLEEARWGL
Trigger: CAGGCCCCACCTGGCTTCCTCCAGCAATTGACCCCAGCCCTTGCCAGCCCTTTCTCCAGAGTTATTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 90 bp GGGTTCCCTGCAGCTGCACAGTTGATCCGGGGCATCGTCTCTAAGTaGAACTCCAGTTCTGAGGCCATGTTGAGGATCTGGGGGATCCGG +
Preference number: 6 (lower is better)
Translates to: GFPAAAQLIRGIVSK*NSSSEAMLRIWGIR
Trigger: CCGGATCCCCCAGATCCTCAACATGGCCTCAGAACTGGAGTTCAACTTAGAGACGATGCCCCGGATCAACTGTGCAGCTGCAGGGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS TCA 72 bp CCAGCCCTGGGACAGTGGATCATGAGAATGGAAGGCTaGGTCCCCAGGACTGGGGCTGACTCTTTGTCAGGA +
Preference number: 6 (lower is better)
Translates to: PALGQWIMRMEG*VPRTGADSLSG
Trigger: TCCTGACAAAGAGTCAGCCCCAGTCCTGGGGACTCAGCCTTCCATTCTCATGATCCACTGTCCCAGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 72 bp TCAGTGCCTTCCACATGCCAGCCCTCCAACCACGGCTaGAACAAAGGCTCAGGACAGTCTGTGGTCATGAGG +
Preference number: 6 (lower is better)
Translates to: SVPSTCQPSNHG*NKGSGQSVVMR
Trigger: CCTCATGACCACAGACTGTCCTGAGCCTTTGTTGCAGCCGTGGTTGGAGGGCTGGCATGTGGAAGGCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS GCA 72 bp ACGTACTTGGATATTGGCCCAGGCAGAGCCTCCGGGTaGTTCCATGTCAGCTGGATCTCGGAGTCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: TYLDIGPGRASG*FHVSWISESER
Trigger: CCTCTCAGACTCCGAGATCCAGCTGACATGGAAGCACCCGGAGGCTCTGCCTGGGCCAATATCCAAGTACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CAA 72 bp ACCTCCTCTCCCCGAGAAAGGCCGAAGTCTGCAATCTaGGAGGCTAGGTTCTCTCCGACCAGCACATTCCGG +
Preference number: 6 (lower is better)
Translates to: TSSPRERPKSAI*EARFSPTSTFR
Trigger: CCGGAATGTGCTGGTCGGAGAGAACCTAGCCTCCAAGATTGCAGACTTCGGCCTTTCTCGGGGAGAGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000473014.1
ENST00000492599.1
CDS CAA 90 bp CTTCCCCTGGCCGGCTCAGCTGCACACGAACACTGTATCCTGTCTTaGGCCTCAGGTTCATTAACGTCACGTTCTCACTGGGGTCCACCA +
Preference number: 6 (lower is better)
Translates to: LPLAGSAAHEHCILS*ASGSLTSRSHWGPP
Trigger: TGGTGGACCCCAGTGAGAACGTGACGTTAATGAACCTGAGGCCAAAGACAGGATACAGTGTTCGTGTGCAGCTGAGCCGGCCAGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS CCA 72 bp TGCCCTTCAGGGAGGAAGATGAGAGCAATTCCTGAGTaGCCTCTCCATCTACCTCAGGAAGCATCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: CPSGRKMRAIPE*PLHLPQEASAS
Trigger: GCTGGCGGATGCTTCCTGAGGTAGATGGAGAGGCCACTCAGGAATTGCTCTCATCTTCCTCCCTGAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 72 bp GGGCAAGGGGTAGGTTCAGATCAAGATGGACATCCCTaGAGAGACAGGAGGAGTGTGCCAAGAGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: GQGVGSDQDGHP*RDRRSVPRGLS
Trigger: AGACAGCCCTCTTGGCACACTCCTCCTGTCTCTCCAGGGATGTCCATCTTGATCTGAACCTACCCCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473014.1
ENST00000492874.1
CDS CAA 72 bp ACAGCGGTGTCACCTTTGTTCACAGTGTGTGTGACCTaGTCTGGAAGCAGGTGGGCTCCAGGGCTGTTGTGC +
Preference number: 6 (lower is better)
Translates to: TAVSPLFTVCVT*SGSRWAPGLLC
Trigger: GCACAACAGCCCTGGAGCCCACCTGCTTCCAGACAAGGTCACACACACTGTGAACAAAGGTGACACCGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS TCA 72 bp TCAGGTGGGCATGACCTTGCCCTTCAGGGAGGAAGATaGGAGCAATTCCTGAGTGGCCTCTCCATCTACCTC +
Preference number: 6 (lower is better)
Translates to: SGGHDLALQGGR*EQFLSGLSIYL
Trigger: GAGGTAGATGGAGAGGCCACTCAGGAATTGCTCTCATCTTCCTCCCTGAAGGGCAAGGTCATGCCCACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CCA 72 bp GGTGTCACCTTTGTTCACAGTGTGTGTGACCTTGTCTaGAAGCAGGTGGGCTCCAGGGCTGTTGTGCACGTA +
Preference number: 6 (lower is better)
Translates to: GVTFVHSVCDLV*KQVGSRAVVHV
Trigger: TACGTGCACAACAGCCCTGGAGCCCACCTGCTTCCAGACAAGGTCACACACACTGTGAACAAAGGTGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS CCA 72 bp AAAGGGCTTGGGGCAAGGGGTAGGTTCAGATCAAGATaGACATCCCTGGAGAGACAGGAGGAGTGTGCCAAG +
Preference number: 6 (lower is better)
Translates to: KGLGARGRFRSR*TSLERQEECAK
Trigger: CTTGGCACACTCCTCCTGTCTCTCCAGGGATGTCCATCTTGATCTGAACCTACCCCTTGCCCCAAGCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473014.1
ENST00000492874.1
CDS CCA 72 bp CACCAAAGCGCCCCTCATCCGTGTTCTGTTTCTCAGTaGAGGTATCTACCCAGTCCCTCCAGCCTGACTTCT +
Preference number: 6 (lower is better)
Translates to: HQSAPHPCSVSQ*RYLPSPSSLTS
Trigger: AGAAGTCAGGCTGGAGGGACTGGGTAGATACCTCCACTGAGAAACAGAACACGGATGAGGGGCGCTTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538015.1
CDS CAA 72 bp ATTTTGATGGCTGCGTTCATCTTCAGCCCGTCCTTCTaGATCATGGCCCGGATGACCTGGCCGAAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: ILMAAFIFSPSF*IMARMTWPKFP
Trigger: GGGGAACTTCGGCCAGGTCATCCGGGCCATGATCAAGAAGGACGGGCTGAAGATGAACGCAGCCATCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000473014.1
CDS CAA 90 bp ATCCGGGGCATCGTCTCTAAGTTGAACTCCAGTTCTGAGGCCATGTaGAGGATCTGGGGGATCCGGTCTGACTTCTCACAGTGCACTCCA +
Preference number: 6 (lower is better)
Translates to: IRGIVSKLNSSSEAM*RIWGIRSDFSQCTP
Trigger: TGGAGTGCACTGTGAGAAGTCAGACCGGATCCCCCAGATCCTCAACATGGCCTCAGAACTGGAGTTCAACTTAGAGACGATGCCCCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CAA 90 bp TGCTTCTCCTTGTGCACACGTGCAGAAAGTACAGCGGTGTCACCTTaGTTCACAGTGTGTGTGACCTTGTCTGGAAGCAGGTGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: CFSLCTRAESTAVSP*FTVCVTLSGSRWAA
Trigger: CGCAGCCCACCTGCTTCCAGACAAGGTCACACACACTGTGAACAAAGGTGACACCGCTGTACTTTCTGCACGTGTGCACAAGGAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485125.1
CDS CCA 72 bp AAGTTGAACTCCAGTTCTGAGGCCATGTTGAGGATCTaGGGGATCCGGTCTTCTTGGCACTGGCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: KLNSSSEAMLRI*GIRSSWHWLPL
Trigger: GAGAGGAAGCCAGTGCCAAGAAGACCGGATCCCCCAGATCCTCAACATGGCCTCAGAACTGGAGTTCAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480269.1
CDS CCA 72 bp ACCTATGACATTTCTGAGATATGTCTAGGTCAGGCCTaGGTGATTCTTGGGGGCCAAGCCCTCCTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: TYDISEICLGQA*VILGGQALLCP
Trigger: AGGGCACAGGAGGGCTTGGCCCCCAAGAATCACCCAGGCCTGACCTAGACATATCTCAGAAATGTCATAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 72 bp CCGTTGCTCTTCCAGATCACGTCTGTCTGCTTCTCCTaGTGCACACGTGCAGAAAGTACAGCGGTGTCACCT +
Preference number: 6 (lower is better)
Translates to: PLLFQITSVCFS*CTRAESTAVSP
Trigger: AGGTGACACCGCTGTACTTTCTGCACGTGTGCACAAGGAGAAGCAGACAGACGTGATCTGGAAGAGCAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS CAA 72 bp GCAGCTGCACAGTTGATCCGGGGCATCGTCTCTAAGTaGAACTCCAGTTCTGAGGCCATGTTGAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: AAAQLIRGIVSK*NSSSEAMLRIW
Trigger: CCAGATCCTCAACATGGCCTCAGAACTGGAGTTCAACTTAGAGACGATGCCCCGGATCAACTGTGCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CAA 72 bp GCCGGCTCAGCTGCACACGAACACTGTATCCTGTCTTaGGCCTCAGGTTCATTAACGTCACGTTCTCACTGG +
Preference number: 6 (lower is better)
Translates to: AGSAAHEHCILS*ASGSLTSRSHW
Trigger: CCAGTGAGAACGTGACGTTAATGAACCTGAGGCCAAAGACAGGATACAGTGTTCGTGTGCAGCTGAGCCGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000488437.1
CDS CAA 90 bp TGCTTCTCCTTGTGCACACGTGCAGAAAGTACAGCGGTGTCACCTTaGTTCACAGTGTGTGTGACCTTGTCTGGAAGCAGGTGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: CFSLCTRAESTAVSP*FTVCVTLSGSRWAP
Trigger: TGGAGCCCACCTGCTTCCAGACAAGGTCACACACACTGTGAACAAAGGTGACACCGCTGTACTTTCTGCACGTGTGCACAAGGAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372476.8
ENST00000538015.1
CDS TCA 72 bp AGGCCTCCTCAGCTGTGGCATCAATGCCCGCGTAAGTaGAGTTCTCAAACAGCGACATGTTCACATAGGCCT +
Preference number: 6 (lower is better)
Translates to: RPPQLWHQCPRK*SSQTATCSHRP
Trigger: AGGCCTATGTGAACATGTCGCTGTTTGAGAACTTCACTTACGCGGGCATTGATGCCACAGCTGAGGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 72 bp AAGTTGAACTCCAGTTCTGAGGCCATGTTGAGGATCTaGGGGATCCGGTCTGACTTCTCACAGTGCACTCCA +
Preference number: 6 (lower is better)
Translates to: KLNSSSEAMLRI*GIRSDFSQCTP
Trigger: TGGAGTGCACTGTGAGAAGTCAGACCGGATCCCCCAGATCCTCAACATGGCCTCAGAACTGGAGTTCAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 72 bp CCTCAGGTGGGCATGACCTTGCCACATCACTCTTGGTaGTATAGACACTGTAGTTCAGGGACTCAATGGCCA +
Preference number: 6 (lower is better)
Translates to: PQVGMTLPHHSW*YRHCSSGTQWP
Trigger: TGGCCATTGAGTCCCTGAACTACAGTGTCTATACCACCAAGAGTGATGTGGCAAGGTCATGCCCACCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492874.1
CDS CAA 72 bp TGTGGGCCACCACAGCCAGCCGAGCTAACATTTTTATaGAGCACTTACCGTGGTCCAGGCCCTGGTCATTTA +
Preference number: 6 (lower is better)
Translates to: CGPPQPAELTFL*STYRGPGPGHL
Trigger: TAAATGACCAGGGCCTGGACCACGGTAAGTGCTCAATAAAAATGTTAGCTCGGCTGGCTGTGGTGGCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 72 bp CCAGATCACGTCTGTCTGCTTCTCCTTGTGCACACGTaGAGAAAGTACAGCGGTGTCACCTTTGTTCACAGT +
Preference number: 6 (lower is better)
Translates to: PDHVCLLLLVHT*RKYSGVTFVHS
Trigger: ACTGTGAACAAAGGTGACACCGCTGTACTTTCTGCACGTGTGCACAAGGAGAAGCAGACAGACGTGATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS GCA 72 bp TTGCTCTTCCAGATCACGTCTGTCTGCTTCTCCTTGTaGACACGTGCAGAAAGTACAGCGGTGTCACCTTTG +
Preference number: 6 (lower is better)
Translates to: LLFQITSVCFSL*TRAESTAVSPL
Trigger: CAAAGGTGACACCGCTGTACTTTCTGCACGTGTGCACAAGGAGAAGCAGACAGACGTGATCTGGAAGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS CCA 72 bp AACACCTTCCAAGACTCCTTCCAGCAAGCCCCACCTTaGCTAGGTACTTTATACCCAAGACACACCTGTGTC +
Preference number: 6 (lower is better)
Translates to: NTFQDSFQQAPP*LGTLYPRHTCV
Trigger: GACACAGGTGTGTCTTGGGTATAAAGTACCTAGCCAAGGTGGGGCTTGCTGGAAGGAGTCTTGGAAGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 72 bp TTGTGCACACGTGCAGAAAGTACAGCGGTGTCACCTTaGTTCACAGTGTGTGTGACCTTGTCTGGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LCTRAESTAVSP*FTVCVTLSGSR
Trigger: CCTGCTTCCAGACAAGGTCACACACACTGTGAACAAAGGTGACACCGCTGTACTTTCTGCACGTGTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372476.8
ENST00000485125.1
ENST00000538015.1
CDS GCA 72 bp CACACCTGTGTCACACCTGGAACACAGCCCAGGTCATaGCTTAGACCACCTATGACATTTCTGAGATATGTC +
Preference number: 6 (lower is better)
Translates to: HTCVTPGTQPRS*LRPPMTFLRYV
Trigger: GACATATCTCAGAAATGTCATAGGTGGTCTAAGGCATGACCTGGGCTGTGTTCCAGGTGTGACACAGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 72 bp AAACACCTTCCAAGACTCCTTCCAGCAAGCCCCACCTaGGCTAGGTACTTTATACCCAAGACACACCTGTGT +
Preference number: 6 (lower is better)
Translates to: KHLPRLLPASPT*ARYFIPKTHLC
Trigger: ACACAGGTGTGTCTTGGGTATAAAGTACCTAGCCAAGGTGGGGCTTGCTGGAAGGAGTCTTGGAAGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS TCA 72 bp CATAATCCGAAACTACCTTTACCCCAGTCCTATTCCTaGAACACCTTCCAAGACTCCTTCCAGCAAGCCCCA +
Preference number: 6 (lower is better)
Translates to: HNPKLPLPQSYS*NTFQDSFQQAP
Trigger: TGGGGCTTGCTGGAAGGAGTCTTGGAAGGTGTTTCAGGAATAGGACTGGGGTAAAGGTAGTTTCGGATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS GCA 72 bp CGTTCCAACTCAGGCTCCAAAGCTCTTACTCTTGACTaGATCTCACACTTTAACAGCCTCTGTGTAGTGTGC +
Preference number: 6 (lower is better)
Translates to: RSNSGSKALTLD*ISHFNSLCVVC
Trigger: GCACACTACACAGAGGCTGTTAAAGTGTGAGATGCAGTCAAGAGTAAGAGCTTTGGAGCCTGAGTTGGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473014.1
ENST00000492874.1
CDS GCA 72 bp ATTTTCAGAGGCATACTCTTTCAGCATTTTGATGGCTaGGTTCATCTTCAGCCCGTCCTTCTTGATCATGGC +
Preference number: 6 (lower is better)
Translates to: IFRGILFQHFDG*VHLQPVLLDHG
Trigger: GCCATGATCAAGAAGGACGGGCTGAAGATGAACGCAGCCATCAAAATGCTGAAAGAGTATGCCTCTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372476.8
CDS CCA 72 bp GCCAGCCGAGCTAACATTTTTATTGAGCACTTACCGTaGTCCAGGCCCTGGTCATTTAACAGACATGTTAAT +
Preference number: 6 (lower is better)
Translates to: ASRANIFIEHLP*SRPWSFNRHVN
Trigger: ATTAACATGTCTGTTAAATGACCAGGGCCTGGACCACGGTAAGTGCTCAATAAAAATGTTAGCTCGGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473014.1
CDS CAA 90 bp GGTCATTTTCAGAGGCATACTCTGTGTAAAGAATCCAATATTATTTaGCCAGAAATAACTCTGGAGAAAGGGCTGGCAAGGGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: GHFQRHTLCKESNII*PEITLEKGLARAGV
Trigger: GACCCCAGCCCTTGCCAGCCCTTTCTCCAGAGTTATTTCTGGCAAAATAATATTGGATTCTTTACACAGAGTATGCCTCTGAAAATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473014.1