RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TICRR (Homo sapiens)

Ensembl gene IDs: ENSG00000140534

Ensembl transcript IDs: ENST00000268138.12, ENST00000560985.5, ENST00000561095.1

Found 816 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTaGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCCCC +
Preference number: 1 (lower is better)
Translates to: RTRSRLVQRVCGALL*GTLGGNDEPGDGLP
Trigger: GGGGAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR GCA 90 bp CAGCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTaGAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGAGG +
Preference number: 1 (lower is better)
Translates to: QHSGSGCCSSTRARL*RRSGRCSSWMRPSR
Trigger: CCTCGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp TGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTaGTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGC +
Preference number: 1 (lower is better)
Translates to: WLLHVCPGLQHSGSG*CSSTRARLCRRSGR
Trigger: GCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp CAGCTCCTCCTCAGCGGCACGTGTGGGGAGGTGTCTCATGGCAGCTaGTCCAGCGGATATCCCGTTTCCTCCCAGACTGGGGGACAGAAT +
Preference number: 1 (lower is better)
Translates to: QLLLSGTCGEVSHGS*SSGYPVSSQTGGQN
Trigger: ATTCTGTCCCCCAGTCTGGGAGGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCCGCTGAGGAGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp TGCCGCCAGCGGGTGCTTCGGGCCTCAGCCTCGTTGCTGTCCCAGTaGGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCA +
Preference number: 1 (lower is better)
Translates to: CRQRVLRASASLLSQ*EMNLMAKLSYLSSS
Trigger: TGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGAGGCTGAGGCCCGAAGCACCCGCTGGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp CCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTaGCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAG +
Preference number: 1 (lower is better)
Translates to: PRTSAFRQWVLFLHA*PSLQEERTLFQLDE
Trigger: CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 90 bp AGCAGCACCAGCAGCAGATTGCCTTCTCGGAACTGGAGATGCAGCTaGAGGAGCAGCAGAGGCTGGTGTACTGGCTGGAGGTGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: SSTSSRLPSRNWRCS*RSSRGWCTGWRWPW
Trigger: CCAGGGCCACCTCCAGCCAGTACACCAGCCTCTGCTGCTCCTCCAGCTGCATCTCCAGTTCCGAGAAGGCAATCTGCTGCTGGTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp GAGAGGAGCAGCACCAGCAGCAGATTGCCTTCTCGGAACTGGAGATaGAGCTGGAGGAGCAGCAGAGGCTGGTGTACTGGCTGGAGGTGG +
Preference number: 1 (lower is better)
Translates to: ERSSTSSRLPSRNWR*SWRSSRGWCTGWRW
Trigger: CCACCTCCAGCCAGTACACCAGCCTCTGCTGCTCCTCCAGCTGCATCTCCAGTTCCGAGAAGGCAATCTGCTGCTGGTGCTGCTCCTCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp GAGGCCCTGGATGCTGCCATTGAGTATAAGAATGAGGCCATCACATaGCGCCAGCGGGTGCTTCGGGCCTCAGCCTCGTTGCTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: EALDAAIEYKNEAIT*RQRVLRASASLLSQ
Trigger: CTGGGACAGCAACGAGGCTGAGGCCCGAAGCACCCGCTGGCGGCATGTGATGGCCTCATTCTTATACTCAATGGCAGCATCCAGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 90 bp GTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCTCCCAGACTaGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCGCCTGACC +
Preference number: 1 (lower is better)
Translates to: VSWQLLQRISRFLPD*GTESGPTHLQGRLT
Trigger: GGTCAGGCGGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR TCA 90 bp AGCGGGTGCTTCGGGCCTCAGCCTCGTTGCTGTCCCAGTGCGAGATaGACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCA +
Preference number: 1 (lower is better)
Translates to: SGCFGPQPRCCPSAR*TSWPSSATSHPQRP
Trigger: TGGTCTCTGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGAGGCTGAGGCCCGAAGCACCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 90 bp TCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTaGATGAGGCCATCGAGGCCCTGGATGCTGCCATTGAGTATAAGA +
Preference number: 1 (lower is better)
Translates to: STRARLCRRSGRCSS*MRPSRPWMLPLSIR
Trigger: TCTTATACTCAATGGCAGCATCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR TCA 90 bp GAAACGATGAGCCAGGTGATGGTCTCCCCAGGAGTGGGCAATGGGTaGGGCCTGAGCCCTGAACTGGCTGGCTCTTGGACAGTCCTTGAA +
Preference number: 1 (lower is better)
Translates to: ETMSQVMVSPGVGNG*GLSPELAGSWTVLE
Trigger: TTCAAGGACTGTCCAAGAGCCAGCCAGTTCAGGGCTCAGGCCTCACCCATTGCCCACTCCTGGGGAGACCATCACCTGGCTCATCGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR GCA 90 bp CTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTaGATAAATGAGGCAGAGTGGCCCCCTGACTTGCCAAGGTCATGG +
Preference number: 1 (lower is better)
Translates to: LTAAQGTPGRAPFSI*INEAEWPPDLPRSW
Trigger: CCATGACCTTGGCAAGTCAGGGGGCCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR GCA 90 bp GACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTaGATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTT +
Preference number: 1 (lower is better)
Translates to: DEGTLKAQLWLRVGC*MSAQDFSIQAVGAV
Trigger: AACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 90 bp AGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGAGGCCCTaGATGCTGCCATTGAGTATAAGAATGAGGCCATCACATGCCGCC +
Preference number: 1 (lower is better)
Translates to: RRSGRCSSWMRPSRP*MLPLSIRMRPSHAA
Trigger: GGCGGCATGTGATGGCCTCATTCTTATACTCAATGGCAGCATCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 90 bp GGTGCCTCCGTGGCTGTCCCAACCATGCCTTTTGTTTGGTTAGGGTaGTCTGAACTTCCTGAATGTAGATCATTCACAGAGGCTTGCAGT +
Preference number: 1 (lower is better)
Translates to: GASVAVPTMPFVWLG*SELPECRSFTEACS
Trigger: ACTGCAAGCCTCTGTGAATGATCTACATTCAGGAAGTTCAGAGCACCCTAACCAAACAAAAGGCATGGTTGGGACAGCCACGGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 90 bp AGACACCGTGGTGCCTCCGTGGCTGTCCCAACCATGCCTTTTGTTTaGTTAGGGTGCTCTGAACTTCCTGAATGTAGATCATTCACAGAG +
Preference number: 1 (lower is better)
Translates to: RHRGASVAVPTMPFV*LGCSELPECRSFTE
Trigger: CTCTGTGAATGATCTACATTCAGGAAGTTCAGAGCACCCTAACCAAACAAAAGGCATGGTTGGGACAGCCACGGAGGCACCACGGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 90 bp AAAAATAGCTTCCACTGCCCAATGCACTCTTCAGTTTCACGTATATaGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAG +
Preference number: 1 (lower is better)
Translates to: KNSFHCPMHSSVSRI*LHSLQSAACVAAAQ
Trigger: CTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCCATATACGTGAAACTGAAGAGTGCATTGGGCAGTGGAAGCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCCTTGTCTGGGTTCCTaGCTCCCAGGCTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGPCLGS*LPGCLS
Trigger: ACTCAGGCAGCCTGGGAGTCAGGAACCCAGACAAGG...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCGGCTGGTGTACTGGCTaGAGGTGGCCCTGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSGWCTG*RWPWSG
Trigger: GCCGCTCCAGGGCCACCTCCAGCCAGTACACCAGCC...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPPQGPG*LLDLLG
Trigger: GCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGTCTTGGGACAGGTGGTaGCGCTCCGAGAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LHACPSLQEERTLFQLDESWDRW*RSERSS
Trigger: GCTGCTCCTCTCGGAGCGTCACCACCTGTCCCAAGA...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR GCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTAGTGGCCCCCTGACTTaGCAAGGTCATGGTTGGGGT +
Preference number: 2 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPSGPLT*QGHGWG
Trigger: ACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACT...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGACTCAAGCTGGACCATaGTCACAGTTAACCTCAGGC +
Preference number: 2 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGTQAGP*SQLTSG
Trigger: GCCTGAGGTTAACTGTGACCATGGTCCAGCTTGAGT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGAGGGCTGAGCCTGGCTaGGTCTTGGGACAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: LHACPSLQEERTLFQLDERAEPG*VLGQVV
Trigger: CACCACCTGTCCCAAGACCCAGCCAGGCTCAGCCCT...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGCCTCAGCGGCACGTGTaGGGAGGTGTCTCATGGCAG +
Preference number: 2 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEPQRHV*GGVSWQ
Trigger: CTGCCATGAGACACCTCCCCACACGTGCCGCTGAGG...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 90 bp GAGGCCATCACATGCCGCCAGCGGGTGCTTCGGGCCTCAGCCTCGTaGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: EAITCRQRVLRASAS*LSQCEMNLMAKLSY
Trigger: GTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGAGGCTGAGGCCCGAAGCACCCGCTGGCGGCATGTGATGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCTCTTGGACAGTCCTTaGAAATGTGGCTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: LARTRSRLVQRVCGALLWLLDSP*KCGCSR
Trigger: TCTGGAGCAGCCACATTTTCAAGGACTGTCCAAGAG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR GCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCGCGCCTTTCTCCATTTaGATAAATGAGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGAPFSI*INEAEW
Trigger: CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGC...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR GCA 90 bp TCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGAATGAGGCCATCACATaGCGCCAGCGGGTGCTTCGG +
Preference number: 2 (lower is better)
Translates to: STRARLCRRSGRCSSWMRNEAIT*RQRVLR
Trigger: CCGAAGCACCCGCTGGCGGCATGTGATGGCCTCATT...CCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGACTCAAGCTGGACCATaGTCACAGTTAACCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LARTRSRLVQRVCGALLWTQAGP*SQLTSG
Trigger: GCCTGAGGTTAACTGTGACCATGGTCCAGCTTGAGT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATGGTTGTCACAGTGGTaGGGGTGGAGGCCAGGGATG +
Preference number: 2 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPWLSQW*GWRPGM
Trigger: CATCCCTGGCCTCCACCCCCACCACTGTGACAACCA...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGGCAGGGCCAGGAGATaGATTGGATCCATAAGGGGA +
Preference number: 2 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEGRARR*IGSIRG
Trigger: TCCCCTTATGGATCCAATCCATCTCCTGGCCCTGCC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp GCTGACTTGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGCCGCCAGCTGACCCATaGCAAAAGAGGCTTGGGACC +
Preference number: 2 (lower is better)
Translates to: ADLALGTRGPLRPSCGYVPPADP*QKRLGT
Trigger: GGTCCCAAGCCTCTTTTGCCATGGGTCAGCTGGCGG...CACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCAGGAGCAGCAGAGGCTaGTGTACTGGCTGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSRSSRG*CTGWRW
Trigger: CCACCTCCAGCCAGTACACCAGCCTCTGCTGCTCCT...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTaGGATGAGGCCATCGAGGCCCTGGATGCTGCCATTGAGTATAAG +
Preference number: 2 (lower is better)
Translates to: LHACPSLQEERTLFQ*DEAIEALDAAIEYK
Trigger: CTTATACTCAATGGCAGCATCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACCTTGTCTGGGTTCCTaGCTCCCAGGCTGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGPCLGS*LPGCLS
Trigger: ACTCAGGCAGCCTGGGAGTCAGGAACCCAGACAAGG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATTGCCTTCTCGGAACTaGAGATGCAGCTGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPLPSRN*RCSWRS
Trigger: GCTCCTCCAGCTGCATCTCCAGTTCCGAGAAGGCAA...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGTCACAGTGGTGGGGGTaGAGGCCAGGGATGTTACTA +
Preference number: 2 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSSQWWG*RPGMLL
Trigger: TAGTAACATCCCTGGCCTCCACCCCCACCACTGTGA...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 90 bp GCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGTaGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: ALGTRGPLRPSCGYV*AVACLPRTSAFRQW
Trigger: CCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR GCA 90 bp GCTGACTTGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGGTGTCTCATGGCAGCTaGTCCAGCGGATATCCCGTT +
Preference number: 2 (lower is better)
Translates to: ADLALGTRGPLRPSCGYVVSHGS*SSGYPV
Trigger: AACGGGATATCCGCTGGAGCAGCTGCCATGAGACAC...CACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGGGCTGGAGATACTTTTaGTTGTCACAGTGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEGWRYF*LSQWWG
Trigger: CCCCCACCACTGTGACAACCAAAAGTATCTCCAGCC...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GCTGACTTGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGCGTTTCCTCCCAGACTaGGGGACAGAATCAGGACCA +
Preference number: 2 (lower is better)
Translates to: ADLALGTRGPLRPSCGYVRFLPD*GTESGP
Trigger: TGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACG...CACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGTGGCTAACCTCAGGGTaGTCCATGGCCACAATAGTA +
Preference number: 2 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEWLTSG*SMATIV
Trigger: TACTATTGTGGCCATGGACCACCCTGAGGTTAGCCA...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 90 bp CGCTGTTCCAGTTGGATGAGGCCATCGAGGCCCTGGATGCTGCCATaGAGTATAAGAATGAGGCCATCACATGCCGCCAGCGGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: RCSSWMRPSRPWMLP*SIRMRPSHAASGCF
Trigger: GAAGCACCCGCTGGCGGCATGTGATGGCCTCATTCTTATACTCAATGGCAGCATCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp TCCTCCTCAGCGGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATTCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: SSSAARVGRCLMAAAPADSWLTP*SFGLSN
Trigger: ATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGA...ATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCCGCTGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCAAAAATGTACTGAGTaGTCAGTCACTAGAGATGAT +
Preference number: 2 (lower is better)
Translates to: LARTRSRLVQRVCGALLWQKCTE*SVTRDD
Trigger: ATCATCTCTAGTGACTGAGCACTCAGTACATTTTTG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGTTCTTAGTGCCGTGGTaGCAAGTGTGCCAATACTGT +
Preference number: 2 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEFLVPW*QVCQYC
Trigger: ACAGTATTGGCACACTTGCCACCACGGCACTAAGAA...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp CCCGTTTCCTCCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCCACTTCTGCTCTGATTaGCTAACCTCAGGGTGGTCC +
Preference number: 2 (lower is better)
Translates to: PVSSQTGGQNQDQLICRAHFCSD*LTSGWS
Trigger: GGACCACCCTGAGGTTAGCCAATCAGAGCAGAAGTG...GGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGCCAATACTGTGTCTGTaGTTGAGGATTAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSPILCL*LRISWM
Trigger: CATCCAGCTAATCCTCAATCACAGACACAGTATTGG...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR GCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGCGCCTTTCTCCATTTaGATAAATGAGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDAPFSI*INEAEW
Trigger: CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGC...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATAGAAGCCACTCAAGCTaGACCATGGTCACAGTTAAC +
Preference number: 2 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDRSHSS*TMVTVN
Trigger: GTTAACTGTGACCATGGTCCAGCTTGAGTGGCTTCT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGCCCTTTTGTGACATTTaGCCATGGCTGGAGATACTT +
Preference number: 2 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEPFCDI*PWLEIL
Trigger: AAGTATCTCCAGCCATGGCCAAATGTCACAAAAGGG...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp AGATACTTTTGGTTGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTACTAAACGGTCATGATGAGGGCTaGGCCTGGCTGGGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: RYFWLSQWWGWRPGMLLNGHDEG*AWLGLG
Trigger: CCCAAGACCCAGCCAGGCTCAGCCCTCATCATGACC...GTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCTGTCCCAGTGCGAGATaGACCTCATGGCCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFCPSAR*TSWPSS
Trigger: TGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACA...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp TCGTTGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCTGAGGCTGAGTCTTaGCTCAGCAGGGAAGACCCT +
Preference number: 2 (lower is better)
Translates to: SLLSQCEMNLMAKLSYLSSEAES*LSREDP
Trigger: AGGGTCTTCCCTGCTGAGCCAAGACTCAGCCTCAGA...TGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCAACATTTGGCCATGGCTaGAGATACTTTTGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPTFGHG*RYFWLS
Trigger: TGACAACCAAAAGTATCTCCAGCCATGGCCAAATGT...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAATGGCAAAAGAGGCTTaGGACCAGGCATCCAACTTC +
Preference number: 2 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAMAKEA*DQASNF
Trigger: GAAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCAT...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp CGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCTCCCTGTGACATTTGGCCATaGCTGGAGATACTTTTGGTT +
Preference number: 2 (lower is better)
Translates to: RVGRCLMAAAPADIPFPPCDIWP*LEILLV
Trigger: AACCAAAAGTATCTCCAGCCATGGCCAAATGTCACA...GGGAGGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCATGGCAAAAGAGGCTTaGGACCAGGCATCCAACTTC +
Preference number: 2 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFMAKEA*DQASNF
Trigger: GAAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCAT...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGGGGTGAGGCTGGAATaGGATTCCTTGTCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: TGLNTFWRLRDSSESALTGVRLE*DSLSGF
Trigger: GAACCCAGACAAGGAATCCCATTCCAGCCTCACCCC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR GCA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCACCAGAGCCCTCCTCTaGAAGTATTTTGACAAGGTG +
Preference number: 2 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFTRALL*KYFDKV
Trigger: CACCTTGTCAAAATACTTGCAGAGGAGGGCTCTGGT...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCAGGTCATGGTTGGGGTaGGGCTGGAATGGGATTCCT +
Preference number: 2 (lower is better)
Translates to: EHNRLEHFLETERQFRVSRSWLG*GWNGIP
Trigger: AGGAATCCCATTCCAGCCTCACCCCAACCATGACCT...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp GCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCCAGTTTAGATGGACCGCCAGCTaGCCCATGGCAAAAGAGGCT +
Preference number: 2 (lower is better)
Translates to: AGPPDLKAYFTCETKTQFRWTAS*PMAKEA
Trigger: AGCCTCTTTTGCCATGGGTCAGCTGGCGGTCCATCT...AAACTGGGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR GCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCAGTTTACAAAGCGCTaGCTGTGTCGCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: EHNRLEHFLETERQFRVSQFTKR*LCRSSP
Trigger: TGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTG...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCATGGCAAAAGAGGCTTaGGACCAGGCATCCAACTTC +
Preference number: 2 (lower is better)
Translates to: TGLNTFWRLRDSSESALTMAKEA*DQASNF
Trigger: GAAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCAT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR CAA 90 bp AGGCATTCTAATGGCAATCTGAACACTGACCATGGCAAAAGAGGCTaGGGACCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: RHSNGNLNTDHGKRG*GPGIQLLYVHRVLA
Trigger: AGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCATGGTCAGTGTTCAGATTGCCATTAGAATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCTCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: TGLNTFWRLRDSSESALTSWLTP*SFGLSN
Trigger: ATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGA...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCAGAAGCCACTCAAGCTaGACCATGGTCACAGTTAAC +
Preference number: 2 (lower is better)
Translates to: TGLNTFWRLRDSSESALTRSHSS*TMVTVN
Trigger: GTTAACTGTGACCATGGTCCAGCTTGAGTGGCTTCT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAATTCTAATGGCAATCTaGACACTGACCATGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQILMAI*TLTMAK
Trigger: TTTTGCCATGGTCAGTGTTCAGATTGCCATTAGAAT...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGCAATGGGTGAGGCCTaGGCCCTGAACTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLAMGEA*ALNWLA
Trigger: AGCCAGCCAGTTCAGGGCTCAGGCCTCACCCATTGC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR GCA 90 bp TCATCTGCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCGCACCAGCAGCAGATTaGCTTCTCGGAACTGGAGAT +
Preference number: 2 (lower is better)
Translates to: SSAGPPDLKAYFTCETKTAPAAD*LLGTGD
Trigger: ATCTCCAGTTCCGAGAAGGCAATCTGCTGCTGGTGC...GGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR TCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGCCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRPQGPG*LLDLLG
Trigger: GCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGG...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGGCAATGGGTGAGGCCTaGGCCCTGAACTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRAMGEA*ALNWLA
Trigger: AGCCAGCCAGTTCAGGGCTCAGGCCTCACCCATTGC...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCGAACTGGCTGGCTCTTaGACAGTCCTTGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAELAGS*TVLENV
Trigger: CACATTTTCAAGGACTGTCCAAGAGCCAGCCAGTTC...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CCA 90 bp TCATCTGCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCCAGCTCCATAGTGTGTaGCTAGGAAAGGGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: SSAGPPDLKAYFTCETKTQLHSV*LGKGLW
Trigger: CCACAAACCCTTTCCTAGCCACACACTATGGAGCTG...GGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGTGCCAAGGTCATGGTTaGGGTGAGGCTGGAATGGGA +
Preference number: 2 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRCQGHG*GEAGMG
Trigger: TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCA...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCATTCTAATGGCAATCTaGACACTGACCATGGCAAAA +
Preference number: 2 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAILMAI*TLTMAK
Trigger: TTTTGCCATGGTCAGTGTTCAGATTGCCATTAGAAT...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR GCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACCAGTTTACAAAGCGCTaGCTGTGTCGCAGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNQFTKR*LCRSSP
Trigger: TGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTG...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR GCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCAAAAATGTACTGAGTaGTCAGTCACTAGAGATGAT +
Preference number: 2 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAQKCTE*SVTRDD
Trigger: ATCATCTCTAGTGACTGAGCACTCAGTACATTTTTG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACCTCTTGGACAGTCCTTaGAAATGTGGCTGCTCCAGA +
Preference number: 2 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNLLDSP*KCGCSR
Trigger: TCTGGAGCAGCCACATTTTCAAGGACTGTCCAAGAG...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAATCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: KNVLSAQSLEMILLLHRESWLTP*SFGLSN
Trigger: ATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGA...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGTGGCAATCTGAACACTaGCCATGGCAAAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRWQSEH*PWQKRL
Trigger: AAGCCTCTTTTGCCATGGTCAGTGTTCAGATTGCCA...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR TCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATGGCAATCTGAACACTaGCCATGGCAAAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILWQSEH*PWQKRL
Trigger: AAGCCTCTTTTGCCATGGTCAGTGTTCAGATTGCCA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR CCA 72 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTaGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGA +
Preference number: 3 (lower is better)
Translates to: GQDPQQAGPAGL*GTPVGHSWWKR
Trigger: TCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CAA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGCGGGCCTCAGCCTCGTaGCTGTCCCAGTGCGAGATG +
Preference number: 3 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSRASAS*LSQCEM
Trigger: CATCTCGCACTGGGACAGCAACGAGGCTGAGGCCCG...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp GGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTaGAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGG +
Preference number: 3 (lower is better)
Translates to: GSGCCSSTRARL*RRSGRCSSWMR
Trigger: CCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CAA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTaGGATGAGGCCATCGAGGCC +
Preference number: 3 (lower is better)
Translates to: AFRQWVLFLHACPSLQEERTLFQ*DEAIEA
Trigger: GGCCTCGATGGCCTCATCCAACTGGAACAGCGTCCG...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR TCA 72 bp TGTGACAGTGAGCAGGGGGCACCTCTCTCGATGGGCTaGCTTGGCCCTTGGGACGAGGGGACCCTTAAGGCC +
Preference number: 3 (lower is better)
Translates to: CDSEQGAPLSMG*LGPWDEGTLKA
Trigger: GGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGCCCATCGAGAGAGGTGCCCCCTGCTCACTGTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp CTCAGCGGCACGTGTGGGGAGGTGTCTCATGGCAGCTaGTCCAGCGGATATCCCGTTTCCTCCCAGACTGGG +
Preference number: 3 (lower is better)
Translates to: LSGTCGEVSHGS*SSGYPVSSQTG
Trigger: CCCAGTCTGGGAGGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCCGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp TCAGCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTaGCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: SAFRQWVLFLHA*PSLQEERTLFQ
Trigger: CTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp CATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTaGTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: HVCPGLQHSGSG*CSSTRARLCRR
Trigger: CCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 72 bp AGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTaGGGCACTCTTGGTGGAAACGATGAGCCAGGTGAT +
Preference number: 3 (lower is better)
Translates to: SRLVQRVCGALL*GTLGGNDEPGD
Trigger: ATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR CCA 72 bp GGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTaGCTACGTGTTGGCTGTTGCATGTCTGCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: GPWDEGTLKAQL*LRVGCCMSAQD
Trigger: GTCCTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CAA 90 bp TCCTCCTCAGCGGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATTGGCTGGAGATACTTTaGGTTGTCACAGTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SSSAARVGRCLMAAAPADWLEIL*VVTVVG
Trigger: CCCCACCACTGTGACAACCAAAAGTATCTCCAGCCA...ATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCCGCTGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CAA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCCTCTGCAAGTATTTaGACAAGGTGGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPSSASI*TRWASS
Trigger: GCTGCTGGCCCACCTTGTCAAAATACTTGCAGAGGA...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp GCTCAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTaGATAAATGAGGCAGAGTGGCCCCCTGACTTGCCA +
Preference number: 3 (lower is better)
Translates to: AQGTPGRAPFSI*INEAEWPPDLP
Trigger: TGGCAAGTCAGGGGGCCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR CCA 72 bp CAGCTGCTCCAGCGGATATCCCGTTTCCTCCCAGACTaGGGGACAGAATCAGGACCAACTCATCTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: QLLQRISRFLPD*GTESGPTHLQG
Trigger: GCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGGATATCCGCTGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CAA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCTGGAGATACTTTTGGTaGTCACAGTGGTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSWRYFW*SQWWGW
Trigger: CCACCCCCACCACTGTGACAACCAAAAGTATCTCCA...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp GATGCTGCCATTGAGTATAAGAATGAGGCCATCACATaGCGCCAGCGGGTGCTTCGGGCCTCAGCCTCGTTG +
Preference number: 3 (lower is better)
Translates to: DAAIEYKNEAIT*RQRVLRASASL
Trigger: CAACGAGGCTGAGGCCCGAAGCACCCGCTGGCGGCATGTGATGGCCTCATTCTTATACTCAATGGCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp GGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTaGCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGT +
Preference number: 3 (lower is better)
Translates to: GPVVATCWLLHV*PGLQHSGSGCC
Trigger: ACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 72 bp AGGCAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTaGGGTGAGGCTGGAATGGGATTCCTTGTCTGGGTT +
Preference number: 3 (lower is better)
Translates to: RQSGPLTCQGHG*GEAGMGFLVWV
Trigger: AACCCAGACAAGGAATCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR-3UTR CAA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGCATGGCAAAAGAGGCTaGGGACCAGGCATCCAACTT +
Preference number: 3 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQHGKRG*GPGIQL
Trigger: AAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCATG...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR GCA 72 bp ACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTaGATGTCTGCCCAGGACTTCAGCATTCAGGCAGTG +
Preference number: 3 (lower is better)
Translates to: TLKAQLWLRVGC*MSAQDFSIQAV
Trigger: CACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 72 bp CTGAACTGGCTGGCTCTTGGACAGTCCTTGAAAATGTaGCTGCTCCAGAAGCCACTCAAGCTGGACCATGGT +
Preference number: 3 (lower is better)
Translates to: LNWLALGQSLKM*LLQKPLKLDHG
Trigger: ACCATGGTCCAGCTTGAGTGGCTTCTGGAGCAGCCACATTTTCAAGGACTGTCCAAGAGCCAGCCAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR CCA 72 bp GGACGCTGTTCCAGTTGGATGAGGCCATCGAGGCCCTaGATGCTGCCATTGAGTATAAGAATGAGGCCATCA +
Preference number: 3 (lower is better)
Translates to: GRCSSWMRPSRP*MLPLSIRMRPS
Trigger: TGATGGCCTCATTCTTATACTCAATGGCAGCATCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 72 bp GGCCATGGCTGGAGATACTTTTGGTTGTCACAGTGGTaGGGGTGGAGGCCAGGGATGTTACTAAACATCCTA +
Preference number: 3 (lower is better)
Translates to: GHGWRYFWLSQW*GWRPGMLLNIL
Trigger: TAGGATGTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCTCCAGCCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CAA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCCATGGCAAAAGAGGCTaGGGACCAGGCATCCAACTT +
Preference number: 3 (lower is better)
Translates to: TGLNTFWRLRDSSESALTHGKRG*GPGIQL
Trigger: AAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCATG...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR CCA 72 bp TTTGGCCATGGCTGGAGATACTTTTGGTTGTCACAGTaGTGGGGGTGGAGGCCAGGGATGTTACTAAACATC +
Preference number: 3 (lower is better)
Translates to: FGHGWRYFWLSQ*WGWRPGMLLNI
Trigger: GATGTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCTCCAGCCATGGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 72 bp GGTGCCTCCGTGGCTGTCCCAACCATGCCTTTTGTTTaGTTAGGGTGCTCTGAACTTCCTGAATGTAGATCA +
Preference number: 3 (lower is better)
Translates to: GASVAVPTMPFV*LGCSELPECRS
Trigger: TGATCTACATTCAGGAAGTTCAGAGCACCCTAACCAAACAAAAGGCATGGTTGGGACAGCCACGGAGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CCA 72 bp AATGTGGCTGCTCCAGAAGCCACTCAAGCTGGACCATaGTCACAGTTAACCTCAGGCCCAACATTAAACAAA +
Preference number: 3 (lower is better)
Translates to: NVAAPEATQAGP*SQLTSGPTLNK
Trigger: TTTGTTTAATGTTGGGCCTGAGGTTAACTGTGACCATGGTCCAGCTTGAGTGGCTTCTGGAGCAGCCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
3UTR TCA 72 bp AGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGCTCAGTAATGTTTGTG +
Preference number: 3 (lower is better)
Translates to: RHPTSLCPQGPG*LLDLLGSVMFV
Trigger: CACAAACATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
3UTR GCA 72 bp GTGGCTGTCCCAACCATGCCTTTTGTTTGGTTAGGGTaGTCTGAACTTCCTGAATGTAGATCATTCACAGAG +
Preference number: 3 (lower is better)
Translates to: VAVPTMPFVWLG*SELPECRSFTE
Trigger: CTCTGTGAATGATCTACATTCAGGAAGTTCAGAGCACCCTAACCAAACAAAAGGCATGGTTGGGACAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTCATGGCAAAAGAGGCTaGGGACCAGGCATCCAACTT +
Preference number: 3 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLHGKRG*GPGIQL
Trigger: AAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCATG...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGAGCTCCCTCTGCGAGTaGGGACAGGGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGSSLCE*GQGARR
Trigger: CCTCCTGGCCCCCTGTCCGCACTCGCAGAGGGAGCT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCGCTCCCAGGAAGGTCTaGACCGACCTCGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGAPRKV*TDLAPP
Trigger: GGGAGGGGCGAGGTCGGTGCAGACCTTCCTGGGAGC...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTCCGCACGGCACAGCTaGGAGGTGGGGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWSARHS*EVGWSR
Trigger: CCGGCTCCACCCCACCTCCCAGCTGTGCCGTGCGGA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGAGGCCCAGTGGACCCTaGCCAGGCCGAATCGGCAAC +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGRPSGP*PGRIGN
Trigger: GTTGCCGATTCGGCCTGGCCAGGGTCCACTGGGCCT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCGGCCTCGGCCTCCTTaGCCTCGCTCTCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWRPRPP*PRSPRP
Trigger: TGGACGTGGAGAGCGAGGCCAAGGAGGCCGAGGCCG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGGCAGGCGCTGGGCCTaGGCCTCGCACCCAGACACG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPGRRWA*ASHPDT
Trigger: CGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCTGCC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGGCAACTCAGATAGGTaGGGAGGCGCAGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPGNSDR*GGAGRP
Trigger: GGGCCGCCCTGCGCCTCCTCACCTATCTGAGTTGCC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGCTCCCAGGAAGGTCTaGACCGACCTCGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPAPRKV*TDLAPP
Trigger: GGGAGGGGCGAGGTCGGTGCAGACCTTCCTGGGAGC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGGTCCAGCGGGTCTGTaGGGCACTCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPGPAGL*GTPVGH
Trigger: GTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGGACCCGCAGCAGGCTaGTCCAGCGGGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEGPAAG*SSGSVG
Trigger: CCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGAGGTCATGGTTGGGGTaGGGCTGGAATGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGRSWLG*GWNGIP
Trigger: AGGAATCCCATTCCAGCCTCACCCCAACCATGACCT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGGCTCCCAGGAAGGTCTaGACCGACCTCGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSAPRKV*TDLAPP
Trigger: GGGAGGGGCGAGGTCGGTGCAGACCTTCCTGGGAGC...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCCCGTGGAGGGTAGCTaGCATGCACTCCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWPVEGS*HALQLG
Trigger: TCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCAGTTTACAAAGCGCTaGCTGTGTCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGQFTKR*LCRSSP
Trigger: TGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTG...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCATGCCGCCAGCGGGTaGTTCGGGCCTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: STRARLCRRSGRCSSWMRHAASG*FGPQPR
Trigger: ACGAGGCTGAGGCCCGAAGCACCCGCTGGCGGCATG...CCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGACAGCTGACACAGAATaGCTTCTAGGCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGTADTE*LLGNPR
Trigger: GCGGGGGTTGCCTAGAAGCCATTCTGTGTCAGCTGT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTCCAATGGTGAGTCATaGCCGGGTGAGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGSNGES*PGEEES
Trigger: AGACTCCTCCTCACCCGGCCATGACTCACCATTGGA...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCTCCGCACGGCACAGCTaGGAGGTGGGGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSSARHS*EVGWSR
Trigger: CCGGCTCCACCCCACCTCCCAGCTGTGCCGTGCGGA...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTGCCAAGGTCATGGTTaGGGTGAGGCTGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGCQGHG*GEAGMG
Trigger: TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCA...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTGTGGGGCACTCCTGTaGGGCACTCTTGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWCGALL*GTLGGN
Trigger: GTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTTTTTCGGGCGACCATaGCTTCCCGGACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWFFGRP*LPGLSW
Trigger: CCAAGAGAGTCCGGGAAGTCATGGTCGCCCGAAAAA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGCGTCCTGTGGATGCTaGGTTCAAGGCCGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPASCGC*VQGRGP
Trigger: AGGACCACGGCCTTGAACTCAGCATCCACAGGACGC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCTGGGCTGGTTCCTCTaGCCGAGCAGCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFLGWFL*PSSSED
Trigger: GTCCTCAGAGCTGCTCGGGCAGAGGAACCAGCCCAG...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTGGCCAAGCTCCTGCTaGGCCCACTCTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPWPSSC*AHSGTG
Trigger: TCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCA...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCTGGACTCCAGGGAGTaGTGTGGCCAAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPLDSRE*CGQAPA
Trigger: AGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCAG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTTTTCCACAACAGCTaGACTCCAGGGAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGLFHNS*TPGSGV
Trigger: CACACCACTCCCTGGAGTCCAGCTGTTGTGGAAAAG...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCATCTTCTGTCTCACTaGAGTACGAGGGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWHLLSH*STRDPS
Trigger: CGAGGGGTCCCTCGTACTCCAGTGAGACAGAAGATG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCTCCGCACGGCACAGCTaGGAGGTGGGGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLSARHS*EVGWSR
Trigger: CCGGCTCCACCCCACCTCCCAGCTGTGCCGTGCGGA...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGGACCCGCAGCAGGCTaGTCCAGCGGGTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRGPAAG*SSGSVG
Trigger: CCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCTCCCGGCTGGTGTACTGGCTaGAGGTGGCCCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RVGRCLMAAAPADIPFPPGWCTG*RWPWSG
Trigger: GCCGCTCCAGGGCCACCTCCAGCCAGTACACCAGCC...GGGAGGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATGCTTCGTGGGCGACGTaGTCTCGGGCCGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDASWAT*SRAGPT
Trigger: AGTGGGACCGGCCCGAGATCACGTCGCCCACGAAGC...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGCGGAGGCATCAGGCTaGCACTCCACGATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEAEASG*HSTMLL
Trigger: AAGGAGCATCGTGGAGTGTCAGCCTGATGCCTCCGC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCATGCCAATCACTCCTaGGACCAGGGCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFHANHS*DQGLGS
Trigger: GCTACCCAGGCCCTGGTCTCAGGAGTGATTGGCATG...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGGGTCATGATGAGGGCTaGGCCTGGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSGHDEG*AWLGLG
Trigger: CCCAAGACCCAGCCAGGCTCAGCCCTCATCATGACC...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACGGCTCCGCGCCCCCTaGGAGTCAAAGAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVERLRAP*ESKNLK
Trigger: CTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGATGCAGCAGCTCCCTCTaGGAGTGCGGACAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGCSSSL*ECGQGA
Trigger: GGCCCCCTGTCCGCACTCGCAGAGGGAGCTGCTGCA...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTGTGTGGCCAAGCTCCTaGTGGGCCCACTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFVWPSS*WAHSGT
Trigger: TGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACAC...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGTTGGAGATCTGCTTATaGACTGGAGTCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGLEICL*TGVSAT
Trigger: TGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAA...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGTCCAGTATCCAAGGTaGTCTGGGGATTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWVQYPR*SGDSHN
Trigger: GTTGTGGGAATCCCCAGACCACCTTGGATACTGGAC...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCTGGACTCCAGGGAGTaGTGTGGCCAAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFLDSRE*CGQAPA
Trigger: AGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCAG...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCTTTTCCACAACAGCTaGACTCCAGGGAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWLFHNS*TPGSGV
Trigger: CACACCACTCCCTGGAGTCCAGCTGTTGTGGAAAAG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGAGGGGCTTTCTGGACTaGAATTCACTGAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGRGFLD*NSLNVA
Trigger: GGCCACATTCAGTGAATTCCAGTCCAGAAAGCCCCT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGACTGGTCTGGGAGCTaGCACACTCCCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEDWSGS*HTPSSS
Trigger: TGAGCTCGAGGGAGTGTGCCAGCTCCCAGACCAGTC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCTGACTTGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGGGGAGGCGACTGGTCTaGGAGCTGGCACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: ADLALGTRGPLRPSCGYVGRRLV*ELAHSL
Trigger: GAGGGAGTGTGCCAGCTCCCAGACCAGTCGCCTCCC...CACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCTCAGCGGCACGTGTaGGGAGGTGTCTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: STRARLCRRSGRCSSWMRPQRHV*GGVSWQ
Trigger: CTGCCATGAGACACCTCCCCACACGTGCCGCTGAGG...CCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCACTCGATGGGCTGACTTaGCCCTTGGGACGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPLDGLT*PLGRGD
Trigger: GTCCCCTCGTCCCAAGGGCCAAGTCAGCCCATCGAG...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp ACATGCCGCCAGCGGGTGCTTCGGGCCTCAGCCTCGTaGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAG +
Preference number: 4 (lower is better)
Translates to: TCRQRVLRASAS*LSQCEMNLMAK
Trigger: CTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGAGGCTGAGGCCCGAAGCACCCGCTGGCGGCATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp ACAGTGAGCAGGGGGCACCTCTCTCGATGGGCTGACTaGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TVSRGHLSRWAD*ALGTRGPLRPS
Trigger: ACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGCCCATCGAGAGAGGTGCCCCCTGCTCACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCCAAGGGCTCTAGGGTaGCTGTCCATGTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWPRALG*LSMFLE
Trigger: TTCAAGAAACATGGACAGTCACCCTAGAGCCCTTGG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTGGAGAACATGTCGTTaGAATTCAGCCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGWRTCR*NSASLV
Trigger: CACCAAGGAGGCTGAATTTCAACGACATGTTCTCCA...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAATGCAGCTACGCTGGGTaGCATCTGGGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVECSYAG*HLGLFL
Trigger: CAGAAAGAGCCCCAGATGTCACCCAGCGTAGCTGCA...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACTTTCAGGAGGAGACTaGGGAGAGAGGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVELSGGD*GERLSP
Trigger: GGGACTGAGCCTCTCTCCTCAGTCTCCTCCTGAAAG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGACACTTTCTGGAGACTaGGAGACAGTTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGTLSGD*ETVQSQ
Trigger: CTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCTGTTCCAGTTGGATaGGGCCATCGAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHACPSLQEERTLFQLDEAVPVG*GHRGPG
Trigger: TCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGC...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCAGTGCCCAAAGTGCTaGTCGTTGGGAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPQCPKC*SLGETT
Trigger: AGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCATCAGATTCAGGGCTaGCTGACACTGATCTACGAG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWHQIQG*LTLIYE
Trigger: CTCGTAGATCAGTGTCAGGCAGCCCTGAATCTGATG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGTTTGCAGGGGACTTCTaGAGCCTTTCTGGAGTATAC +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGFAGDF*SLSGVY
Trigger: GTATACTCCAGAAAGGCTGCAGAAGTCCCCTGCAAA...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGAGAGGAGAGGATGCATaGCAATCACTCCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWRGEDA*QSLLRP
Trigger: TGGTCTCAGGAGTGATTGGCATGCATCCTCTCCTCT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTAGGTGGGTTCAGGTTTaGTTAAGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPRWVQV*LRTCWP
Trigger: GGGCCAGCAGGTCCTTAAGCAAACCTGAACCCACCT...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATTGCTCTTGCCAGGTGTaGTGTGGGAGAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDCSCQV*CGRGGG
Trigger: GCCCCCGCCTCTCCCACAGCACACCTGGCAAGAGCA...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCAAGGCCGTGGTCCTTaGCCTCTGACTCAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFQGRGP*PLTQAV
Trigger: CACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTG...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCCTGTTCCTCCACGCGTaGCCGTCTCTGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSLFLHA*PSLQEE
Trigger: CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAG...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATAGGCCCAGTGGACCCTaGCCAGGCCGAATCGGCAAC +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDRPSGP*PGRIGN
Trigger: GTTGCCGATTCGGCCTGGCCAGGGTCCACTGGGCCT...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGCAGGCGCTGGGCCTaGGCCTCGCACCCAGACACG +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQGRRWA*ASHPDT
Trigger: CGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCTGCC...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCTGCTGGGCCCACTCTaGAACAGGAGAAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFLLGPL*NRRSSR
Trigger: TCTGCTGCTTCTCCTGTTCCAGAGTGGGCCCAGCAG...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCATCTTCTGTCTCACTaGAGTACGAGGGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPHLLSH*STRDPS
Trigger: CGAGGGGTCCCTCGTACTCCAGTGAGACAGAAGATG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGAGGGGCTTTCTGGACTaGAATTCACTGAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWRGFLD*NSLNVA
Trigger: GGCCACATTCAGTGAATTCCAGTCCAGAAAGCCCCT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGGCTGGCAGAGTCTGTaGAATGCCAAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPGWQSL*NAKLML
Trigger: CAGCATCAGCTTGGCATTCCACAGACTCTGCCAGCC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGGGTGACACATAGGTaGGTTCAGGTTTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWGVTHR*VQVCLR
Trigger: CCTTAAGCAAACCTGAACCCACCTATGTGTCACCCC...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGCCGCCAGCTGACCCATaGCAAAAGAGGCTTGGGACC +
Preference number: 4 (lower is better)
Translates to: LHACPSLQEERTLFQLDEPPADP*QKRLGT
Trigger: GGTCCCAAGCCTCTTTTGCCATGGGTCAGCTGGCGG...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCATCAGTTGGCAGCATTaGAATCCACGGAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGISWQH*NPRRKM
Trigger: CATCTTTCTCCGTGGATTTCAATGCTGCCAACTGAT...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTGGAGAACATGTCGTTaGAATTCAGCCTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWWRTCR*NSASLV
Trigger: CACCAAGGAGGCTGAATTTCAACGACATGTTCTCCA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCATGTGTCCTGCTAAATaGCAACTGCTTGATTCGAGG +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGMCPAK*QLLDSR
Trigger: CCTCGAATCAAGCAGTTGTCATTTAGCAGGACACAT...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGGGAGTTTGTGGTGTATaGGAGATCCTTCTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGGVCGV*EILLGV
Trigger: TACACCAAGAAGGATCTCTCATACACCACAAACTCC...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTGGACTGGAATTCACTaGATGTGGCCAAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGWTGIH*MWPSTV
Trigger: AACTGTACTTGGCCACATTCAGTGAATTCCAGTCCA...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGGGGGAATCCCAGGGTaGGACAGAGAAGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEGGIPG*DREDFS
Trigger: TGAGAAGTCTTCTCTGTCTCACCCTGGGATTCCCCC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTGGCAATCTGAACACTaGCCATGGCAAAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWWQSEH*PWQKRL
Trigger: AAGCCTCTTTTGCCATGGTCAGTGTTCAGATTGCCA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGTGAGGCCTGAGCCCTaGACTGGCTGGCTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGVRPEP*TGWLLD
Trigger: GTCCAAGAGCCAGCCAGTTCAGGGCTCAGGCCTCAC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGTGAGGCCTGAGCCCTaGACTGGCTGGCTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRVRPEP*TGWLLD
Trigger: GTCCAAGAGCCAGCCAGTTCAGGGCTCAGGCCTCAC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGCATCCAGCTGTCAGTaGCCAAAGTGCTGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEASSCQ*PKCCSL
Trigger: CAACGAGCAGCACTTTGGGCACTGACAGCTGGATGC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCTTCAGCAGTCAGCCTaGTTACCAACTGCTGAAATA +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGLQQSA*LPTAEI
Trigger: TATTTCAGCAGTTGGTAAGCAGGCTGACTGCTGAAG...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCAGCAGAAGCAGTATCTaGAAGCGAATCATGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGSRSSI*KRIMSL
Trigger: CAGACTCATGATTCGCTTGCAGATACTGCTTCTGCT...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGAGCCTTTTGGAGATCTaGTTATGCACTGGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWSLLEI*LCTGVS
Trigger: CGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGAGAGGTACCTTCTCCTaGCTGGGTATGTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWRGTFS*LGMSFL
Trigger: CAAAAACGACATACCCAGGCAGGAGAAGGTACCTCT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCCACTAGGTATCTTTTaGATTCCTTTCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWPLGIF*IPFSPA
Trigger: GGCTGGGGAGAAAGGAATCCAAAAGATACCTAGTGG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTTATCCTTTAGTTTCTaGGCTGGTTCCTCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWLSFSF*AGSSAR
Trigger: TCGGGCAGAGGAACCAGCCCAGAAACTAAAGGATAA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCTGATCCAGTTCTCCTaGGGAAGGACACTCTATTTT +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGLIQFS*GRTLYF
Trigger: AAAATAGAGTGTCCTTCCCCAGGAGAACTGGATCAG...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCCCTGAGACCAGGGCCTaGGTAGCCCCGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLPETRA*VAPSFR
Trigger: CCTGAAAGACGGGGCTACCCAGGCCCTGGTCTCAGG...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTACTGTCTCCCATCTGTaGTACAGTGCACGTCACGGG +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFTVSHL*YSARHG
Trigger: CCCGTGACGTGCACTGTACCACAGATGGGAGACAGT...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGTACTAGAAGGGCCGTaGGTGGGGGTACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRVLEGP*VGVQAW
Trigger: CCAGGCCTGTACCCCCACCCACGGCCCTTCTAGTAC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCCCATCTGTTTGAAATaGAGAGGGGGTACTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWPICLK*RGGTRR
Trigger: CCTTCTAGTACCCCCTCTCCATTTCAAACAGATGGG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAAAGATGGGCGTCCTGTaGATGCTGAGTTCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEKMGVL*MLSSRP
Trigger: CGGCCTTGAACTCAGCATCCACAGGACGCCCATCTT...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGGGGTGAGGCTGGAATaGGATTCCTTGTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEGVRLE*DSLSGF
Trigger: GAACCCAGACAAGGAATCCCATTCCAGCCTCACCCC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATGGGGAGGTGTCTCATaGCAGCTGCTCCAGCGGATA +
Preference number: 4 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPWGGVS*QLLQRI
Trigger: TATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCA...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp TGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTaGGATGAGGCCATCGAGGCCCTGGATGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: CPSLQEERTLFQ*DEAIEALDAAI
Trigger: AATGGCAGCATCCAGGGCCTCGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTACACCAGCCAGCTTCTaGGGAATCACAAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFTPASF*GITNPR
Trigger: CCTAGGGTTTGTGATTCCTCAGAAGCTGGCTGGTGT...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACCTTTTCTGAGGGGCTaGTCATCTCAGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEPFLRG*SSQTLP
Trigger: GGGCAATGTCTGAGATGATCAGCCCCTCAGAAAAGG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCTCAGAGATTTCTGGTaGCTCTTCTTGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPLRDFW*LFLGVW
Trigger: CCAGACTCCCAAGAAGAGTCACCAGAAATCTCTGAG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTAAAAACCCAGGCGGCTaGGTACCTTGCCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFKNPGG*VPCLLG
Trigger: TCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTT...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTGGAGAAAGCGCGACTaGAAGGAGAGTCTTCTACAG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPWRKRD*KESLLQ
Trigger: CTGTAGAAGACTCTCCTTTCAGTCGCGCTTTCTCCA...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGCCTCTGCAAGTATTTTaGCAAGGTGGGCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LHACPSLQEERTLFQLDEPLQVF*QGGPAA
Trigger: GGCTGCTGGCCCACCTTGTCAAAATACTTGCAGAGG...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp TCCTCCTCAGCGGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATTGTCCCAGTGCGAGATaGACCTCATGGCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSAARVGRCLMAAAPADCPSAR*TSWPSS
Trigger: TGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACA...ATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCCGCTGAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCACCCAGACACGAACTaGAGCAGCTCCCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDHPDTN*SSSLCE
Trigger: CTCGCAGAGGGAGCTGCTGCAGTTCGTGTCTGGGTG...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCTGAGGAGAGTGACATaGTCTGTGTCACTTGTAATG +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWLRRVT*SVSLVM
Trigger: CATTACAAGTGACACAGAGCATGTCACTCTCCTCAG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATAGTGGCCCCCTGACTTaGCAAGGTCATGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDSGPLT*QGHGWG
Trigger: ACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CCCGTTTCCTCCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCAATGAGGCCATCACATaGCGCCAGCGGGTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PVSSQTGGQNQDQLICRANEAIT*RQRVLR
Trigger: CCGAAGCACCCGCTGGCGGCATGTGATGGCCTCATT...GGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACTCACTGCTTTCCTTTaGGACCCTGGTCGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVELTAFL*DPGRKA
Trigger: AGCCTTTCGACCAGGGTCCCAAAGGAAAGCAGTGAG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAACGGCCTCGGCCTCCTTaGCCTCGCTCTCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQRPRPP*PRSPRP
Trigger: TGGACGTGGAGAGCGAGGCCAAGGAGGCCGAGGCCG...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTCTTCTTGGCTGATCTaGTACGAAGTTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWSSWLI*YEVPAV
Trigger: AACTGCAGGAACTTCGTACCAGATCAGCCAAGAAGA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAATGGCCAAGTACAGTTTaGCAAAAACCCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEWPSTV*QKPRRL
Trigger: CAGCCGCCTGGGTTTTTGCCAAACTGTACTTGGCCA...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCTGAGTTCAAGGCCGTaGTCCTTGCCCTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: STRARLCRRSGRCSSWMRLSSRP*SLPSDS
Trigger: TGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAG...CCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACCTCTTCGTCTCCCGTaGAGGGTAGCTGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGPLRLP*RVAAMH
Trigger: GTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATAGCTGGGAGGTGGGGTaGAGCCGGAAACAAACACCT +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDSWEVG*SRKQTP
Trigger: AGGTGTTTGTTTCCGGCTCCACCCCACCTCCCAGCT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGGCACAGCTGGGAGGTaGGGTGGAGCCGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGGTAGR*GGAGNK
Trigger: TTTGTTTCCGGCTCCACCCCACCTCCCAGCTGTGCC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGTTGCCTTCTCGGAACTaGAGATGCAGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LHACPSLQEERTLFQLDELPSRN*RCSWRS
Trigger: GCTCCTCCAGCTGCATCTCCAGTTCCGAGAAGGCAA...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCACAGTGGTGGGGGTaGAGGCCAGGGATGTTACTA +
Preference number: 4 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPSQWWG*RPGMLL
Trigger: TAGTAACATCCCTGGCCTCCACCCCCACCACTGTGA...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp CTTGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTaGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGPWDEGTLKAQ*WLRVGCCMSAQ
Trigger: CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCACATGCATACAACATaGTTTCTCCTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPHMHTT*FLLWPQ
Trigger: CTGTGGCCACAGGAGAAATCATGTTGTATGCATGTG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCTGCAGCTACGCTGGGTaGCATCTGGGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLCSYAG*HLGLFL
Trigger: CAGAAAGAGCCCCAGATGTCACCCAGCGTAGCTGCA...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATAACTTCTCCATCACCTaGTTAGGGGTGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDNFSIT*LGVGGR
Trigger: CCTGCCGCCCACCCCTAAGCAGGTGATGGAGAAGTT...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGTTTCTTGAATCTCTTTaGCTGCTTCAACAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGFLESL*LLQQGE
Trigger: TTCTCCCTGTTGAAGCAGGCAAAGAGATTCAAGAAA...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR GCA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTCCTTAAAAGCTGCCTaGTTTGTAGGGGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGSLKAA*FVGVIF
Trigger: AAAAATGACCCCTACAAAGCAGGCAGCTTTTAAGGA...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACGTGCCCATGAAGGCTaGTGCTCTCGGAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGRAHEG*CSRRCS
Trigger: AGAACACCTCCGAGAGCAGCAGCCTTCATGGGCACG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATTGTAGGTTTGCCCCCTaGTCTTGCCAGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDCRFAP*SCQVCC
Trigger: ACAGCACACCTGGCAAGAGCAGGGGGCAAACCTACA...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCGCCTGACCTTCAAGGCCGTGGTCCTTaGCCTCTGACTCAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRLGDRIRTNSSAGPPDLQGRGP*PLTQAV
Trigger: CACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTG...AAGGTCAGGCGGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGCGCCTTTCTCCATTTaGATAAATGAGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPAPFSI*INEAEW
Trigger: CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGGCACCAGCAGCAGATTaGCTTCTCGGAACTGGAGAT +
Preference number: 4 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEAPAAD*LLGTGD
Trigger: ATCTCCAGTTCCGAGAAGGCAATCTGCTGCTGGTGC...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp CGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCTCCCGTGTCTCATGGCAGCTaGTCCAGCGGATATCCCGTT +
Preference number: 4 (lower is better)
Translates to: RVGRCLMAAAPADIPFPPVSHGS*SSGYPV
Trigger: AACGGGATATCCGCTGGAGCAGCTGCCATGAGACAC...GGGAGGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp TCGTTGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCAACGCGTGCCCGTCTCTaGAGGAGGAGCGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: SLLSQCEMNLMAKLSYLSTRARL*RRSGRC
Trigger: ACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT...TGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp CTCCACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGCTACGTGTTGGCTGTTaGATGTCTGCCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LHACPSLQEERTLFQLDELRVGC*MSAQDF
Trigger: GAAGTCCTGGGCAGACATGCAACAGCCAACACGTAG...CTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACGCCACCTCTGAGCAGTaGCCCCAGCTCACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYATSEQ*PQLTLG
Trigger: CCCCAGGGTGAGCTGGGGGCACTGCTCAGAGGTGGC...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTGATCTGCTTATGCACTaGAGTCTCGGCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFDLLMH*SLGHTL
Trigger: AAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATC...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCGAATACTTTGGACTaGAGAATTTTCTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGPNTLD*RIFSLV
Trigger: GACCAAAGAGAAAATTCTCCAGTCCAAAGTATTCGG...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAAAGTCACCAATGCCATaGTGTTCGGCTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEKSPMP*CSASLR
Trigger: CCTCAGTGAAGCCGAACACCATGGCATTGGTGACTT...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCCCATCTGTTTGAAATaGAGAGGGGGTACTAGAAGG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPPICLK*RGGTRR
Trigger: CCTTCTAGTACCCCCTCTCCATTTCAAACAGATGGG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTACAGGACTCTCTTCCTaGAACTCAACCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPTGLSS*NSTQTV
Trigger: GACAGTTTGGGTTGAGTTCCAGGAAGAGAGTCCTGT...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGGTCACAGATCCTTTTaGCTCCACGGTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEGHRSF*LHGQLL
Trigger: AAGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCCGTTTCCTCCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCAGCTGGGAGGTGGGGTaGAGCCGGAAACAAACACCT +
Preference number: 4 (lower is better)
Translates to: PVSSQTGGQNQDQLICRASWEVG*SRKQTP
Trigger: AGGTGTTTGTTTCCGGCTCCACCCCACCTCCCAGCT...GGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAAGGTGTTTTCCCCTaGAACAGCAGCGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDEGVFP*NSSGDW
Trigger: CCAGTCTCCGCTGCTGTTCCAGGGGAAAACACCTTC...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCTGACTTGGCCCTTGGGACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGTCTGAGGCTGAGTCTTaGCTCAGCAGGGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: ADLALGTRGPLRPSCGYVSEAES*LSREDP
Trigger: AGGGTCTTCCCTGCTGAGCCAAGACTCAGCCTCAGA...CACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGTCCCAAGGGCCAAGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCACTTAAGGCCCAGTTGTaGCTACGTGTTGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPLKAQL*LRVGCC
Trigger: GCAACAGCCAACACGTAGCCACAACTGGGCCTTAAG...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGCTTCGTGGGCGACGTaGTCTCGGGCCGGTCCCACT +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTASWAT*SRAGPT
Trigger: AGTGGGACCGGCCCGAGATCACGTCGCCCACGAAGC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCATGCCAATCACTCCTaGGACCAGGGCCTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWHANHS*DQGLGS
Trigger: GCTACCCAGGCCCTGGTCTCAGGAGTGATTGGCATG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCGTGTATAAGTTCTGCTaGTGGGGCGCCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLVYKFC*WGASWR
Trigger: TCTCCAGGAGGCGCCCCATCAGCAGAACTTATACAC...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGCCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQPQGPG*LLDLLG
Trigger: GCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGG...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCACCTTGTCTGGGTTCCTaGCTCCCAGGCTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAPCLGS*LPGCLS
Trigger: ACTCAGGCAGCCTGGGAGTCAGGAACCCAGACAAGG...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCAGGTCATGGTTGGGGTaGGGCTGGAATGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLRSWLG*GWNGIP
Trigger: AGGAATCCCATTCCAGCCTCACCCCAACCATGACCT...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp TCGTTGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCACCTCTCTCGATGGGCTaGCTTGGCCCTTGGGACGAG +
Preference number: 4 (lower is better)
Translates to: SLLSQCEMNLMAKLSYLSPLSMG*LGPWDE
Trigger: CTCGTCCCAAGGGCCAAGTCAGCCCATCGAGAGAGG...TGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAAGCCTTTTGGAGATCTaGTTATGCACTGGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVESLLEI*LCTGVS
Trigger: CGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCT...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACCCTTGATTTGTCTGTaGAGCAGCCTTTTGGAGATC +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEPLICL*SSLLEI
Trigger: GATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGCTGACACTCCACGATaGTCCTTCTGGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGADTPR*SFWDQR
Trigger: CCTCTGATCCCAGAAGGAGCATCGTGGAGTGTCAGC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGCAGAGTCTGTGGAATaGCAAGCTGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRAESVE*QADAGR
Trigger: CCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTCATTCCTTCCATTCGTaGAAACGAGGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFHSFHS*KRGLIL
Trigger: GAGTATGAGGCCTCGTTTCCACGAATGGAAGGAATG...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGCAAAAAGAAGACTCTTaGGAGACCGAATACTTTGGA +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWQKEDS*ETEYFG
Trigger: TCCAAAGTATTCGGTCTCCCAAGAGTCTTCTTTTTG...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGGTAAACAGTTTCTTTaGCGTAACAGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPGKQFL*RNRWGR
Trigger: TCTTCCCCACCTGTTACGCCAAAGAAACTGTTTACC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGTACTAGAAGGGCCGTaGGTGGGGGTACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQVLEGP*VGVQAW
Trigger: CCAGGCCTGTACCCCCACCCACGGCCCTTCTAGTAC...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCCTGAGTTCAAGGCCGTaGTCCTTGCCCTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLLSSRP*SLPSDS
Trigger: TGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAG...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGAACAGCAGCGGAGACTaGGTCAGAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWNSSGD*VRAWRA
Trigger: TGCCCTCCAGGCTCTGACCCAGTCTCCGCTGCTGTT...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCGCCTGACCTTGAAGGTGTTTTCCCCTaGAACAGCAGCGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: PRLGDRIRTNSSAGPPDLEGVFP*NSSGDW
Trigger: CCAGTCTCCGCTGCTGTTCCAGGGGAAAACACCTTC...AAGGTCAGGCGGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATGGCAGGGCCAGGAGATaGATTGGATCCATAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDGRARR*IGSIRG
Trigger: TCCCCTTATGGATCCAATCCATCTCCTGGCCCTGCC...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTGAACTGGCTGGCTCTTaGACAGTCCTTGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFELAGS*TVLENV
Trigger: CACATTTTCAAGGACTGTCCAAGAGCCAGCCAGTTC...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGGTCCAGCGGGTCTGTaGGGCACTCCTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTGPAGL*GTPVGH
Trigger: GTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCCGTTTCCTCCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCCGTTTCCTCCCAGACTaGGGGACAGAATCAGGACCA +
Preference number: 4 (lower is better)
Translates to: PVSSQTGGQNQDQLICRARFLPD*GTESGP
Trigger: TGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACG...GGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCGGGCACCTCTCTCGATaGGCTGACTTGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFGHLSR*ADLALG
Trigger: CCCAAGGGCCAAGTCAGCCCATCGAGAGAGGTGCCC...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACGCCCCCAGCTCACCCTaGGGTTGGGGCTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYAPSSP*GWGCDS
Trigger: ACTGTCACAGCCCCAACCCCAGGGTGAGCTGGGGGC...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTACTGTCCATGTTTCTTaGATCTCTTTGCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPTVHVS*ISLPAS
Trigger: TGAAGCAGGCAAAGAGATTCAAGAAACATGGACAGT...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR TCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATACACCAGCCAGCTTCTaGGGAATCACAAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDTPASF*GITNPR
Trigger: CCTAGGGTTTGTGATTCCTCAGAAGCTGGCTGGTGT...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAAAAAACCCAGGCGGCTaGGTACCTTGCCTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRKNPGG*VPCLLG
Trigger: TCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTT...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCACTTTCAGGAGGAGACTaGGGAGAGAGGCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTALSGGD*GERLSP
Trigger: GGGACTGAGCCTCTCTCCTCAGTCTCCTCCTGAAAG...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGGTTTTTGCCCTTTTGTaGCATTTGGCCATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSVFALL*HLAMAG
Trigger: TCCAGCCATGGCCAAATGTCACAAAAGGGCAAAAAC...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGTGTGGCCAAGCTCCTaGTGGGCCCACTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQVWPSS*WAHSGT
Trigger: TGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACAC...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGGCCCATGAAGGCTGCTaGTCTCGGAGGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWAHEGC*SRRCSE
Trigger: CTCAGAACACCTCCGAGAGCAGCAGCCTTCATGGGC...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCGTGCCCATGAAGGCTaGTGCTCTCGGAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWRAHEG*CSRRCS
Trigger: AGAACACCTCCGAGAGCAGCAGCCTTCATGGGCACG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTTTTTCAAGTCACCAATaGCATGGTGTTCGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFFSSHQ*HGVRLH
Trigger: GTGAAGCCGAACACCATGGCATTGGTGACTTGAAAA...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCGTTGTCTTCCCACTGTaGTTGGGGGATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLVVFPL*LGDGVQ
Trigger: TTGGACACCATCCCCCAAGCACAGTGGGAAGACAAC...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGCTGAAAGATTCAGATaGCAAGACAGTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDAERFR*QDSATS
Trigger: GGAGGTGGCACTGTCTTGCCATCTGAATCTTTCAGC...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAATGGCCAAGCTCCTGCTaGGCCCACTCTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQWPSSC*AHSGTG
Trigger: TCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCA...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTTCTTCTTGGCTGATCTaGTACGAAGTTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFSSWLI*YEVPAV
Trigger: AACTGCAGGAACTTCGTACCAGATCAGCCAAGAAGA...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCTTCCCACTGTGCTTaGGGGATGGTGTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRSSHCA*GMVSKE
Trigger: TTCCTTGGACACCATCCCCCAAGCACAGTGGGAAGA...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGGTCACAGATCCTTTTaGCTCCACGGTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDGHRSF*LHGQLL
Trigger: AAGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACC...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCGGTCACAGATCCTTTTaGCTCCACGGTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSGHRSF*LHGQLL
Trigger: AAGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACC...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCCCTCTTCGTCTCCCGTaGAGGGTAGCTGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFPLRLP*RVAAMH
Trigger: GTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGG...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGACCACATCCTCATCTCTaGGGTCTTTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRPHPHL*GLCSER
Trigger: CCTCTCAGAGCAAAGACCCCAGAGATGAGGATGTGG...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCATGGCAAAAGAGGCTTaGGACCAGGCATCCAACTTC +
Preference number: 4 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSMAKEA*DQASNF
Trigger: GAAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCAT...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGTCAGTTTCACGTATATaGCTTCACAGTTTACAAAGC +
Preference number: 4 (lower is better)
Translates to: LARTRSRLVQRVCGALLWSVSRI*LHSLQS
Trigger: GCTTTGTAAACTGTGAAGCCATATACGTGAAACTGA...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATTCTTAGTGCCGTGGTaGCAAGTGTGCCAATACTGT +
Preference number: 4 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPFLVPW*QVCQYC
Trigger: ACAGTATTGGCACACTTGCCACCACGGCACTAAGAA...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GCATTCAGGCAGTGGGTGCTGTTCCTCCACGCGTGCCCGTCTCTGCAGGAGGAGGATTTCTTAGTGCCGTaGTGGCAAGTGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: AFRQWVLFLHACPSLQEEDFLVP*WQVCQY
Trigger: GTATTGGCACACTTGCCACCACGGCACTAAGAAATC...CTCCTCCTGCAGAGACGGGCACGCGTGGAGGAACAGCACCCACTGCCTGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TCGTTGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCAACCGTGGTGCCTCCGTaGCTGTCCCAACCATGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLSQCEMNLMAKLSYLSTVVPP*LSQPCL
Trigger: AAGGCATGGTTGGGACAGCCACGGAGGCACCACGGT...TGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAAAACGAAGAAATACCTaGAGCTGGCACTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEKRRNT*SWHSLT
Trigger: AGTTAGAGAGTGCCAGCTTCAGGTATTTCTTCGTTT...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACCTTCTCTTCTTGGCTaGTCTGGTACGAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGPSLLG*SGTKFL
Trigger: CAGGAACTTCGTACCAGATCAGCCAAGAAGAGAAGG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTATCCAAAGTGTTTCTTaGACGCTTTTTCATTCGAGC +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPIQSVS*TLFHSS
Trigger: GCTCGAATGAAAAAGCGTTCAAGAAACACTTTGGAT...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAAGCTCTCCTCCTTGCTaGGGGGCTCAGCCTCTAATG +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQSSPPC*GAQPLM
Trigger: CATTAGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCT...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACGCGTCCTGTGGATGCTaGGTTCAAGGCCGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYASCGC*VQGRGP
Trigger: AGGACCACGGCCTTGAACTCAGCATCCACAGGACGC...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp TGGGTCTTGGGACAGGTGGTGACGCTCCGAGAGGAGCAGCACCAGCAGCAGATTTGGAGAAAGCGCGACTaGAAGGAGAGTCTTCTACAG +
Preference number: 4 (lower is better)
Translates to: WVLGQVVTLREEQHQQQIWRKRD*KESLLQ
Trigger: CTGTAGAAGACTCTCCTTTCAGTCGCGCTTTCTCCA...AATCTGCTGCTGGTGCTGCTCCTCTCGGAGCGTCACCACCTGTCCCAAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGGTGTATAAGTTCTGCTaGTGGGGCGCCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWVYKFC*WGASWR
Trigger: TCTCCAGGAGGCGCCCCATCAGCAGAACTTATACAC...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAACCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQPQGPG*LLDLLG
Trigger: GCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGG...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGTGTCAGTGCCCAAAGTaGTGCTCGTTGGGAGAGACC +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWCQCPK*CSLGET
Trigger: GGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACA...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCAGCCACATCCGGACTaGCATCTGGATGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDQPHPD*HLDVTS
Trigger: AGAAGTTACATCCAGATGGCAGTCCGGATGTGGCTG...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCCTGGGCTGGTTCCTCTaGCCGAGCAGCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTLGWFL*PSSSED
Trigger: GTCCTCAGAGCTGCTCGGGCAGAGGAACCAGCCCAG...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATAGAGGAGAGGATGCATaGCAATCACTCCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDRGEDA*QSLLRP
Trigger: TGGTCTCAGGAGTGATTGGCATGCATCCTCTCCTCT...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCCCCGTGGAGGGTAGCTaGCATGCACTCCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFPVEGS*HALQLG
Trigger: TCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGG...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAACAGCTGACACAGAATaGCTTCTAGGCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTATADTE*LLGNPR
Trigger: GCGGGGGTTGCCTAGAAGCCATTCTGTGTCAGCTGT...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGGAGAATTTTCTCTTTaGTCTGACTTATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPGEFSL*SDLSCW
Trigger: CCAGCAAGATAAGTCAGACCAAAGAGAAAATTCTCC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCAAGTCACCAATGCCATaGTGTTCGGCTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLKSPMP*CSASLR
Trigger: CCTCAGTGAAGCCGAACACCATGGCATTGGTGACTT...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGAGTTGTGCCGAAGCCTaGCACTGTCTCCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWSCAEA*HCLPSV
Trigger: CACAGATGGGAGACAGTGCCAGGCTTCGGCACAACT...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGGGGTGACACATAGGTaGGTTCAGGTTTGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGGVTHR*VQVCLR
Trigger: CCTTAAGCAAACCTGAACCCACCTATGTGTCACCCC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATACAGGACTCTCTTCCTaGAACTCAACCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDTGLSS*NSTQTV
Trigger: GACAGTTTGGGTTGAGTTCCAGGAAGAGAGTCCTGT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGCCACATCCTCATCTCTaGGGTCTTTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQPHPHL*GLCSER
Trigger: CCTCTCAGAGCAAAGACCCCAGAGATGAGGATGTGG...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCAGTCCTTGAAAATGTaGCTGCTCCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDQSLKM*LLQKPL
Trigger: GAGTGGCTTCTGGAGCAGCCACATTTTCAAGGACTG...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCCAGTCCTTGAAAATGTaGCTGCTCCAGAAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLQSLKM*LLQKPL
Trigger: GAGTGGCTTCTGGAGCAGCCACATTTTCAAGGACTG...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGCACTTCTGCTCTGATTaGCTAACCTCAGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQHFCSD*LTSGWS
Trigger: GGACCACCCTGAGGTTAGCCAATCAGAGCAGAAGTG...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGGTTGTGGCTACGTGTTaGCTGTTGCATGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQVVATC*LLHVCP
Trigger: TGGGCAGACATGCAACAGCCAACACGTAGCCACAAC...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp ACGAGGGGACCCTTAAGGCCCAGTTGTGGCTACGTGTaGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: TRGPLRPSCGYV*AVACLPRTSAF
Trigger: GAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCCACATGCATACAACATaGTTTCTCCTGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLHMHTT*FLLWPQ
Trigger: CTGTGGCCACAGGAGAAATCATGTTGTATGCATGTG...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTTCTGAGGCGTGCCCATaGAGGCTGCTGCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFSEACP*RLLLSE
Trigger: CTCCGAGAGCAGCAGCCTTCATGGGCACGCCTCAGA...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAACTGGGGTCTTTGCTCTaGGAGGAAGGTGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQLGSLL*EEGVFP
Trigger: GGGGAAAACACCTTCCTCTCAGAGCAAAGACCCCAG...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCTCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLSWLTP*SFGLSN
Trigger: ATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGA...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACAGATGGACCGCCAGCTaGCCCATGGCAAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYRWTAS*PMAKEA
Trigger: AGCCTCTTTTGCCATGGGTCAGCTGGCGGTCCATCT...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTTCTTGGGACAGGTGGTaGCGCTCCGAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFSWDRW*RSERSS
Trigger: GCTGCTCCTCTCGGAGCGTCACCACCTGTCCCAAGA...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAAGCACTGGCAGAGAGTaGGGAAATAACTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRSTGRE*GNNSSD
Trigger: ATCACTGGAGTTATTTCCCCACTCTCTGCCAGTGCT...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATTCTGGATGTAACTTCTaGGCCTTCACATTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDSGCNF*AFTFSL
Trigger: AAGGCTGAATGTGAAGGCCCAGAAGTTACATCCAGA...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCCACTAGGTATCTTTTaGATTCCTTTCTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDPLGIF*IPFSPA
Trigger: GGCTGGGGAGAAAGGAATCCAAAAGATACCTAGTGG...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTGGGGAAAGCAATTCCTaGTTGAAAAGATTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFGESNS*LKRFLR
Trigger: TCGAAGAAATCTTTTCAACCAGGAATTGCTTTCCCC...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGCTGGCAGAGTCTGTaGAATGCCAAGCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQGWQSL*NAKLML
Trigger: CAGCATCAGCTTGGCATTCCACAGACTCTGCCAGCC...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCAGAGCCCTAAGATGGGCGTCCTGTaGATGCTGAGTTCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: DEPHGQAQLPLILRDQSPKMGVL*MLSSRP
Trigger: CGGCCTTGAACTCAGCATCCACAGGACGCCCATCTT...AGGGCTCTGGTCTCTGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGGGAGGCGACTGGTCTaGGAGCTGGCACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSGRRLV*ELAHSL
Trigger: GAGGGAGTGTGCCAGCTCCCAGACCAGTCGCCTCCC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCCCATGCACTCCAACTTaGAGACCCCTCTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLPCTPT*RPLFTL
Trigger: AAGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGG...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTAGGGCTGAGCCTGGCTaGGTCTTGGGACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFRAEPG*VLGQVV
Trigger: CACCACCTGTCCCAAGACCCAGCCAGGCTCAGCCCT...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCCCCTTTTGTGACATTTaGCCATGGCTGGAGATACTT +
Preference number: 4 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSPFCDI*PWLEIL
Trigger: AAGTATCTCCAGCCATGGCCAAATGTCACAAAAGGG...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCAGAGCCCTAGTATTTTGACAAGGTaGGCCAGCAGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: DEPHGQAQLPLILRDQSPSILTR*ASSPWP
Trigger: GGGCCATGGGCTGCTGGCCCACCTTGTCAAAATACT...AGGGCTCTGGTCTCTGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp AAGGTCATGGTTGGGGTGAGGCTGGAATGGGATTCCTaGTCTGGGTTCCTGACTCCCAGGCTGCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: KVMVGVRLEWDS*SGFLTPRLPEL
Trigger: TAACTCAGGCAGCCTGGGAGTCAGGAACCCAGACAAGGAATCCCATTCCAGCCTCACCCCAACCATGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGGGAACCCCATCTGTTTaGAATGGAGAGGGGGTACTA +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWGTPSV*NGEGVL
Trigger: TAGTACCCCCTCTCCATTTCAAACAGATGGGGTTCC...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACGTGTATAAGTTCTGCTaGTGGGGCGCCTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYVYKFC*WGASWR
Trigger: TCTCCAGGAGGCGCCCCATCAGCAGAACTTATACAC...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGCAATGGGTGAGGCCTaGGCCCTGAACTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSAMGEA*ALNWLA
Trigger: AGCCAGCCAGTTCAGGGCTCAGGCCTCACCCATTGC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAAGCTCCCTCTGCGAGTaGGGACAGGGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRSSLCE*GQGARR
Trigger: CCTCCTGGCCCCCTGTCCGCACTCGCAGAGGGAGCT...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACAGTTAAACACACCATaGGCAGCAAATCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGQLNTP*AANLSP
Trigger: AGGTGACAGATTTGCTGCGCATGGTGTGTTTAACTG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCATTCAGGCAGTGGGTaGTGTTCCTCCACGCGTGCC +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFHSGSG*CSSTRA
Trigger: GGCACGCGTGGAGGAACAGCACCCACTGCCTGAATG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGTCCAGTATCCAAGGTaGTCTGGGGATTCCCACAAC +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQVQYPR*SGDSHN
Trigger: GTTGTGGGAATCCCCAGACCACCTTGGATACTGGAC...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAACAGTGCCACCTCCGTaGTGGAGCAGTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQTVPPP*WSSSQT
Trigger: TGTTTGTGAACTGCTCCACCACGGAGGTGGCACTGT...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGCAAACGGTTTAAAGTaGCATCAGTTGGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRANGLK*HQLAAL
Trigger: CAATGCTGCCAACTGATGCCACTTTAAACCGTTTGC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGGTAAACAGTTTCTTTaGCGTAACAGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGGKQFL*RNRWGR
Trigger: TCTTCCCCACCTGTTACGCCAAAGAAACTGTTTACC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCACCACGATGCTCCTTCTaGGATCAGAGGTCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAPRCSF*DQRSFY
Trigger: GTAGAAAGACCTCTGATCCCAGAAGGAGCATCGTGG...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AGATACTTTTGGTTGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTACTAAACGACTGGTCTGGGAGCTaGCACACTCCCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RYFWLSQWWGWRPGMLLNDWSGS*HTPSSS
Trigger: TGAGCTCGAGGGAGTGTGCCAGCTCCCAGACCAGTC...GTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTTTCCTGGGAGGCGACTaGTCTGGGAGCTGGCACACT +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFFLGGD*SGSWHT
Trigger: AGTGTGCCAGCTCCCAGACCAGTCGCCTCCCAGGAA...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CCA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGACAGGACTCTCTTCCTaGAACTCAACCCAAACTGTC +
Preference number: 4 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQTGLSS*NSTQTV
Trigger: GACAGTTTGGGTTGAGTTCCAGGAAGAGAGTCCTGT...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTAACAGCAGCGGAGACTaGGTCAGAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFNSSGD*VRAWRA
Trigger: TGCCCTCCAGGCTCTGACCCAGTCTCCGCTGCTGTT...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCTGTGGGGCACTCCTGTaGGGCACTCTTGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTCGALL*GTLGGN
Trigger: GTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACA...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATAGGAGGAATCAGATTTaGGAACACAACAGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDRRNQI*EHNRLE
Trigger: TTCAAGCCTGTTGTGTTCCCAAATCTGATTCCTCCT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAACGGAACTGGCACCACTaGTGTTACAGAAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQRNWHH*CYRKET
Trigger: GGTTTCCTTTCTGTAACATCAGTGGTGCCAGTTCCG...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCAGAGGACCTGCCCTTaGTTTGTCTGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFQRTCP*FVCAAA
Trigger: GGCTGCTGCACAGACAAATCAAGGGCAGGTCCTCTG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGCGGAGGCATCAGGCTaGCACTCCACGATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSAEASG*HSTMLL
Trigger: AAGGAGCATCGTGGAGTGTCAGCCTGATGCCTCCGC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGGGGGAATCCCAGGGTaGGACAGAGAAGACTTCTCA +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTGGIPG*DREDFS
Trigger: TGAGAAGTCTTCTCTGTCTCACCCTGGGATTCCCCC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFPQGPG*LLDLLG
Trigger: GCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR TCA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCCCATCTAGGTTTGTGTaGGTATATTCTGATGTTTGC +
Preference number: 4 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSPSRFV*VYSDVC
Trigger: GCAAACATCAGAATATACTCACACAAACCTAGATGG...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCGGCTCCGCGCCCCCTaGGAGTCAAAGAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESARLRAP*ESKNLK
Trigger: CTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATACTTTGGTCACTTCTTaGACTGTATCTTTCACTGGC +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDTLVTS*TVSFTG
Trigger: GCCAGTGAAAGATACAGTGCAAGAAGTGACCAAAGT...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGCTGACACTCCACGATaGTCCTTCTGGGATCAGAGG +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTADTPR*SFWDQR
Trigger: CCTCTGATCCCAGAAGGAGCATCGTGGAGTGTCAGC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCTGACTTATCTTGCTaGAAAGAGTGGACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRSDLSC*KEWTLC
Trigger: GCAAAGAGTCCACTCTTTCCAGCAAGATAAGTCAGA...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATCCGAATACTTTGGACTaGAGAATTTTCTCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDPNTLD*RIFSLV
Trigger: GACCAAAGAGAAAATTCTCCAGTCCAAAGTATTCGG...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGTTATCCTTTAGTTTCTaGGCTGGTTCCTCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWLSFSF*AGSSAR
Trigger: TCGGGCAGAGGAACCAGCCCAGAAACTAAAGGATAA...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCACAGGAAGGAGGAGATaGGGGAATCCCAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTTGRRR*GNPRVR
Trigger: TCTCACCCTGGGATTCCCCCATCTCCTCCTTCCTGT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCAGTTGTGCCGAAGCCTaGCACTGTCTCCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTSCAEA*HCLPSV
Trigger: CACAGATGGGAGACAGTGCCAGGCTTCGGCACAACT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCCATGCACTCCAACTTaGAGACCCCTCTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWPCTPT*RPLFTL
Trigger: AAGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCAGAGCCCTCAGCTCCATAGTGTGTaGCTAGGAAAGGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: DEPHGQAQLPLILRDQSPQLHSV*LGKGLW
Trigger: CCACAAACCCTTTCCTAGCCACACACTATGGAGCTG...AGGGCTCTGGTCTCTGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp TGGGTCTTGGGACAGGTGGTGACGCTCCGAGAGGAGCAGCACCAGCAGCAGATTACATTTGGCCATGGCTaGAGATACTTTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WVLGQVVTLREEQHQQQITFGHG*RYFWLS
Trigger: TGACAACCAAAAGTATCTCCAGCCATGGCCAAATGT...AATCTGCTGCTGGTGCTGCTCCTCTCGGAGCGTCACCACCTGTCCCAAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCAGAGCCCTTGGCTAACCTCAGGGTaGTCCATGGCCACAATAGTA +
Preference number: 4 (lower is better)
Translates to: DEPHGQAQLPLILRDQSPWLTSG*SMATIV
Trigger: TACTATTGTGGCCATGGACCACCCTGAGGTTAGCCA...AGGGCTCTGGTCTCTGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CCCGTTTCCTCCCAGACTGGGGGACAGAATCAGGACCAACTCATCTGCAGGGCCACCATGCCTTTTGTTTaGTTAGGGTGCTCTGAACTT +
Preference number: 4 (lower is better)
Translates to: PVSSQTGGQNQDQLICRATMPFV*LGCSEL
Trigger: AAGTTCAGAGCACCCTAACCAAACAAAAGGCATGGT...GGCCCTGCAGATGAGTTGGTCCTGATTCTGTCCCCCAGTCTGGGAGGAAACGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGCGAGTCAAAGAACTTaGAGGCCCAGTGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSASQRT*RPSGPW
Trigger: CCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGAGCAAAATCCCAGCTaGAAGATTCAGATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAEQNPS*KIQMAR
Trigger: TCTTGCCATCTGAATCTTTCAGCTGGGATTTTGCTC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATAGACTACTTTTTACTTaGTTCAGGCAGTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDRLLFT*FRQFTS
Trigger: AGAAGTGAACTGCCTGAATCAAGTAAAAAGTAGTCT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCAGCTCTCCTCCTTGCTaGGGGGCTCAGCCTCTAATG +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESASSPPC*GAQPLM
Trigger: CATTAGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCT...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAATTCTAATGGCAATCTaGACACTGACCATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGILMAI*TLTMAK
Trigger: TTTTGCCATGGTCAGTGTTCAGATTGCCATTAGAAT...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTGCATCCAGCTGTCAGTaGCCAAAGTGCTGCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFASSCQ*PKCCSL
Trigger: CAACGAGCAGCACTTTGGGCACTGACAGCTGGATGC...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCTTCAGCAGTCAGCCTaGTTACCAACTGCTGAAATA +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWLQQSA*LPTAEI
Trigger: TATTTCAGCAGTTGGTAAGCAGGCTGACTGCTGAAG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGAGCAGAAGCAGTATCTaGAAGCGAATCATGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWSRSSI*KRIMSL
Trigger: CAGACTCATGATTCGCTTGCAGATACTGCTTCTGCT...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCATGTTTCGAGCACATaGATACAACATGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDHVSST*IQHDFS
Trigger: GGAGAAATCATGTTGTATGCATGTGCTCGAAACATG...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACATGTTTCGAGCACATaGATACAACATGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGHVSST*IQHDFS
Trigger: GGAGAAATCATGTTGTATGCATGTGCTCGAAACATG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCACAGTTAAACACACCATaGGCAGCAAATCTGTCACCT +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAQLNTP*AANLSP
Trigger: AGGTGACAGATTTGCTGCGCATGGTGTGTTTAACTG...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGGGAGTCTGGTAAGCTaGAGGTACCTCCGAATCCAA +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTGSLVS*RYLRIQ
Trigger: TTGGATTCGGAGGTACCTGCAGCTTACCAGACTCCC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGATCCTTAAAAGCTGCCTaGTTTGTAGGGGTCATTTTT +
Preference number: 4 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGSLKAA*FVGVIF
Trigger: AAAAATGACCCCTACAAAGCAGGCAGCTTTTAAGGA...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCGCCCATGAAGGCTGCTaGTCTCGGAGGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAAHEGC*SRRCSE
Trigger: CTCAGAACACCTCCGAGAGCAGCAGCCTTCATGGGC...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGTTGTCTTCCCACTGTaGTTGGGGGATGGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTVVFPL*LGDGVQ
Trigger: TTGGACACCATCCCCCAAGCACAGTGGGAAGACAAC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCAAGGCCGTGGTCCTTaGCCTCTGACTCAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSQGRGP*PLTQAV
Trigger: CACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTG...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCAGTGGCCCCCTGACTTaGCAAGGTCATGGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESASGPLT*QGHGWG
Trigger: ACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACT...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATTTAAGGAACGGCACATaGTATTCATCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDLRNGT*YSSSVS
Trigger: TGAGACAGAAGATGAATACCATGTGCCGTTCCTTAA...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTACAGGAAGGAGGAGATaGGGGAATCCCAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFTGRRR*GNPRVR
Trigger: TCTCACCCTGGGATTCCCCCATCTCCTCCTTCCTGT...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCCAGTTTTTCCTGGGAGGCGACTaGTCTGGGAGCTGGCACACT +
Preference number: 4 (lower is better)
Translates to: AGPPDLKAYFTCETKTQFFLGGD*SGSWHT
Trigger: AGTGTGCCAGCTCCCAGACCAGTCGCCTCCCAGGAA...AAACTGGGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp AGGGATGTTACTAAACATCCTATAACACACAGGACAGGCCCCCACAACCAAGAAGGCACAGCTGGGAGGTaGGGTGGAGCCGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: RDVTKHPITHRTGPHNQEGTAGR*GGAGNK
Trigger: TTTGTTTCCGGCTCCACCCCACCTCCCAGCTGTGCC...TTCTTGGTTGTGGGGGCCTGTCCTGTGTGTTATAGGATGTTTAGTAACATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAAGAAGCCACTCAAGCTaGACCATGGTCACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQRSHSS*TMVTVN
Trigger: GTTAACTGTGACCATGGTCCAGCTTGAGTGGCTTCT...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGGCTTGAACACTTTCTaGAGACTGAGAGACAGTTCA +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAGLNTF*RLRDSS
Trigger: TGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AGGGATGTTACTAAACATCCTATAACACACAGGACAGGCCCCCACAACCAAGAATGGTTGTCACAGTGGTaGGGGTGGAGGCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RDVTKHPITHRTGPHNQEWLSQW*GWRPGM
Trigger: CATCCCTGGCCTCCACCCCCACCACTGTGACAACCA...TTCTTGGTTGTGGGGGCCTGTCCTGTGTGTTATAGGATGTTTAGTAACATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGCTTTATTCCACTCCTaGGCAGCATTTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTALFHS*AAFPQL
Trigger: AAGCTGGGGAAATGCTGCTCAGGAGTGGAATAAAGC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAAAGATGAGGTTCACTTaGCAGCTTTATTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAKMRFT*QLYSTP
Trigger: AGGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTT...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAAAACGAAGAAATACCTaGAGCTGGCACTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAKRRNT*SWHSLT
Trigger: AGTTAGAGAGTGCCAGCTTCAGGTATTTCTTCGTTT...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACCTTGTCTGGGTTCCTaGCTCCCAGGCTGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRPCLGS*LPGCLS
Trigger: ACTCAGGCAGCCTGGGAGTCAGGAACCCAGACAAGG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTTGCAGCAGCTCCCTCTaGGAGTGCGGACAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLCSSSL*ECGQGA
Trigger: GGCCCCCTGTCCGCACTCGCAGAGGGAGCTGCTGCA...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGTGGTCTGACTTATCTTaGTGGAAAGAGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWWSDLS*WKEWTL
Trigger: AAGAGTCCACTCTTTCCAGCAAGATAAGTCAGACCA...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCTGTAGGTTTGCCCCCTaGTCTTGCCAGGTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSCRFAP*SCQVCC
Trigger: ACAGCACACCTGGCAAGAGCAGGGGGCAAACCTACA...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCGTGCCACCTCCGTGGTaGAGCAGTTCACAAACAGTC +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAVPPPW*SSSQTV
Trigger: GACTGTTTGTGAACTGCTCCACCACGGAGGTGGCAC...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGTGCCACCTCCGTGGTaGAGCAGTTCACAAACAGTC +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSVPPPW*SSSQTV
Trigger: GACTGTTTGTGAACTGCTCCACCACGGAGGTGGCAC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGCTGAAAGATTCAGATaGCAAGACAGTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTAERFR*QDSATS
Trigger: GGAGGTGGCACTGTCTTGCCATCTGAATCTTTCAGC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTGTTGGGAGAGACCACTaGGCCACTGAGCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFVGRDH*ATEPFR
Trigger: TCTAAAAGGCTCAGTGGCCCAGTGGTCTCTCCCAAC...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAACTTCTGCAGCCTTTCTaGAGTATACAACGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQLLQPF*SIQRSL
Trigger: CAAACTCCGTTGTATACTCCAGAAAGGCTGCAGAAG...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCACTCTCTCCTGGGCTaGGCAGTCGATGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAHSLLG*AVDEVG
Trigger: TCCAACTTCATCGACTGCCCAGCCCAGGAGAGAGTG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGGGAGGCGACTGGTCTaGGAGCTGGCACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRGRRLV*ELAHSL
Trigger: GAGGGAGTGTGCCAGCTCCCAGACCAGTCGCCTCCC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGGCACAGCTGGGAGGTaGGGTGGAGCCGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRGTAGR*GGAGNK
Trigger: TTTGTTTCCGGCTCCACCCCACCTCCCAGCTGTGCC...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCTCAGTTTCACGTATATaGCTTCACAGTTTACAAAGC +
Preference number: 4 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLSVSRI*LHSLQS
Trigger: GCTTTGTAAACTGTGAAGCCATATACGTGAAACTGA...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AGATACTTTTGGTTGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTACTAAACGGCTGGAGATACTTTTaGTTGTCACAGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RYFWLSQWWGWRPGMLLNGWRYF*LSQWWG
Trigger: CCCCCACCACTGTGACAACCAAAAGTATCTCCAGCC...GTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GGGACCCTTAAGGCCCAGTTGTGGCTACGTGTTGGCTGTTGCATGTCTGCCCAGCACAAATACTCACCATaGTTAACAACTGCCTACAGT +
Preference number: 4 (lower is better)
Translates to: GTLKAQLWLRVGCCMSAQHKYSP*LTTAYS
Trigger: ACTGTAGGCAGTTGTTAACCATGGTGAGTATTTGTG...CTGGGCAGACATGCAACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
3UTR CAA 72 bp TTTGTGACATTTGGCCATGGCTGGAGATACTTTTGGTaGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: FVTFGHGWRYFW*SQWWGWRPGML
Trigger: TAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCTCCAGCCATGGCCAAATGTCACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGGGCAACTCAGATAGGTaGGGAGGCGCAGGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRGNSDR*GGAGRP
Trigger: GGGCCGCCCTGCGCCTCCTCACCTATCTGAGTTGCC...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGAACATTTTAACGGTTaGGATCATGTTTCGAGCACA +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAEHFNG*DHVSST
Trigger: TGTGCTCGAAACATGATCTCAACCGTTAAAATGTTC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACAGAGGACCTGCCCTTaGTTTGTCTGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRQRTCP*FVCAAA
Trigger: GGCTGCTGCACAGACAAATCAAGGGCAGGTCCTCTG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCCTTTTCTGAGGGGCTaGTCATCTCAGACATTGCCC +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAPFLRG*SSQTLP
Trigger: GGGCAATGTCTGAGATGATCAGCCCCTCAGAAAAGG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGTCGTTTTTGAGGAGTaGTTTTTGAATCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAVVFEE*FLNPMV
Trigger: CACCATTGGATTCAAAAATCACTCCTCAAAAACGAC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AGGGATGTTACTAAACATCCTATAACACACAGGACAGGCCCCCACAACCAAGAACTGGGGTCTTTGCTCTaGGAGGAAGGTGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RDVTKHPITHRTGPHNQELGSLL*EEGVFP
Trigger: GGGGAAAACACCTTCCTCTCAGAGCAAAGACCCCAG...TTCTTGGTTGTGGGGGCCTGTCCTGTGTGTTATAGGATGTTTAGTAACATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGATTCTAATGGCAATCTaGACACTGACCATGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWILMAI*TLTMAK
Trigger: TTTTGCCATGGTCAGTGTTCAGATTGCCATTAGAAT...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGCAATGGGTGAGGCCTaGGCCCTGAACTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRAMGEA*ALNWLA
Trigger: AGCCAGCCAGTTCAGGGCTCAGGCCTCACCCATTGC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGCAGTCTCCTCCCGCTaGTCCGCAGGATCGGCTTCG +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLAVSSR*SAGSAS
Trigger: CGAAGCCGATCCTGCGGAGCAGCGGGAGGAGACTGC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAAACTTCTCCATCACCTaGTTAGGGGTGGGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRNFSIT*LGVGGR
Trigger: CCTGCCGCCCACCCCTAAGCAGGTGATGGAGAAGTT...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACAGATGGCAAGACAGTaGCACCTCCGTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRQMARQ*HLRGGA
Trigger: TGCTCCACCACGGAGGTGGCACTGTCTTGCCATCTG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCAAAGAGTGGACTCTTTaGACACTTCGAGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTKEWTL*TLRDFG
Trigger: GCCGAAGTCTCGAAGTGTGCAAAGAGTCCACTCTTT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGAAAAATAGCTTCCACTaGCCAATGCACTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWKNSFH*PMHSSV
Trigger: AACTGAAGAGTGCATTGGGCAGTGGAAGCTATTTTT...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACTGCTGGGCCCACTCTaGAACAGGAGAAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRLLGPL*NRRSSR
Trigger: TCTGCTGCTTCTCCTGTTCCAGAGTGGGCCCAGCAG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCACTTCTAATTCCTTaGTGCCTTTTGATTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRSLLIP*CLLILG
Trigger: TCCTAAAATCAAAAGGCACCAAGGAATTAGAAGTGA...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAATGAGAGATCCTTCTTaGTGTAGTTTTAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LPSTSPPATSPTRGRARRMRDPS*CSFRKA
Trigger: AGCTTTTCTAAAACTACACCAAGAAGGATCTCTCAT...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAATACAACGGAGTTTGTaGTGTATGAGAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAIQRSL*CMRDPS
Trigger: AGAAGGATCTCTCATACACCACAAACTCCGTTGTAT...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCTGGCCAAGTACAGTTTaGCAAAAACCCAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSWPSTV*QKPRRL
Trigger: CAGCCGCCTGGGTTTTTGCCAAACTGTACTTGGCCA...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGATGTTTGCACGACGTCGAAAACGCCTAATGATGCATTTCTTAGAACGTATCAGGAGCAGCAGAGGCTaGTGTACTGGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LMFARRRKRLMMHFLERIRSSRG*CTGWRW
Trigger: CCACCTCCAGCCAGTACACCAGCCTCTGCTGCTCCT...GATACGTTCTAAGAAATGCATCATTAGGCGTTTTCGACGTCGTGCAAACATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCATCAGTTGGCAGCATTaGAATCCACGGAGAAAGATG +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTISWQH*NPRRKM
Trigger: CATCTTTCTCCGTGGATTTCAATGCTGCCAACTGAT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCACTATCCACAACATCTaGGAAAAGGGAAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTTIHNI*EKGSCV
Trigger: GACACAGCTTCCCTTTTCTCAGATGTTGTGGATAGT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCAGAGATTTCTGGTaGCTCTTCTTGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESALRDFW*LFLGVW
Trigger: CCAGACTCCCAAGAAGAGTCACCAGAAATCTCTGAG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGGAGTTTGTGGTGTATaGGAGATCCTTCTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTGVCGV*EILLGV
Trigger: TACACCAAGAAGGATCTCTCATACACCACAAACTCC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAATGGGTATGTCGTTTTTaGGGAGTGATTTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQWVCRF*GVIFES
Trigger: GGATTCAAAAATCACTCCTCAAAAACGACATACCCA...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTACACTTTCTGGAGACTaGGAGACAGTTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFTLSGD*ETVQSQ
Trigger: CTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGT...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACCATCTGTGGTACAGTaGACGTCACGGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRPSVVQ*TSREGI
Trigger: GATGCCTTCCCGTGACGTGCACTGTACCACAGATGG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAAGGTGGGTTCAGGTTTaGTTAAGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRRWVQV*LRTCWP
Trigger: GGGCCAGCAGGTCCTTAAGCAAACCTGAACCCACCT...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACTGCTCTTGCCAGGTGTaGTGTGGGAGAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNCSCQV*CGRGGG
Trigger: GCCCCCGCCTCTCCCACAGCACACCTGGCAAGAGCA...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTGCGCCTTTCTCCATTTaGATAAATGAGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFAPFSI*INEAEW
Trigger: CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGC...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACAGTTTACAAAGCGCTaGCTGTGTCGCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRQFTKR*LCRSSP
Trigger: TGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCAAAAATGTACTGAGTaGTCAGTCACTAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: QGTPGRAPFSICINEAEWQKCTE*SVTRDD
Trigger: ATCATCTCTAGTGACTGAGCACTCAGTACATTTTTG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCTCTGGATGTAACTTCTaGGCCTTCACATTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTSGCNF*AFTFSL
Trigger: AAGGCTGAATGTGAAGGCCCAGAAGTTACATCCAGA...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCTCTGGTGACTCTTCTTaGGAGTCTGGTAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESASGDSS*ESGKLQ
Trigger: CTGCAGCTTACCAGACTCCCAAGAAGAGTCACCAGA...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAATACAACGGAGTTTGTaGTGTATGAGAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQIQRSL*CMRDPS
Trigger: AGAAGGATCTCTCATACACCACAAACTCCGTTGTAT...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGGCAGGGCCAGGAGATaGATTGGATCCATAAGGGGA +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRGRARR*IGSIRG
Trigger: TCCCCTTATGGATCCAATCCATCTCCTGGCCCTGCC...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTGAACTGGCTGGCTCTTaGACAGTCCTTGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFELAGS*TVLENV
Trigger: CACATTTTCAAGGACTGTCCAAGAGCCAGCCAGTTC...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CTGATGTTTGCACGACGTCGAAAACGCCTAATGATGCATTTCTTAGAACGTATCTTTTGGTTGTCACAGTaGTGGGGGTGGAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LMFARRRKRLMMHFLERIFWLSQ*WGWRPG
Trigger: CCCTGGCCTCCACCCCCACCACTGTGACAACCAAAA...GATACGTTCTAAGAAATGCATCATTAGGCGTTTTCGACGTCGTGCAAACATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR TCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGCGAGTCAAAGAACTTaGAGGCCCAGTGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRASQRT*RPSGPW
Trigger: CCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTTGGACTGGAATTCACTaGATGTGGCCAAGTACAGTT +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFWTGIH*MWPSTV
Trigger: AACTGTACTTGGCCACATTCAGTGAATTCCAGTCCA...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGTCTGAGGCGTGCCCATaGAGGCTGCTGCTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRSEACP*RLLLSE
Trigger: CTCCGAGAGCAGCAGCCTTCATGGGCACGCCTCAGA...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCTGGCAATCTGAACACTaGCCATGGCAAAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSWQSEH*PWQKRL
Trigger: AAGCCTCTTTTGCCATGGTCAGTGTTCAGATTGCCA...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AGATACTTTTGGTTGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTACTAAACCCAATACTGTGTCTGTaGTTGAGGATTAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RYFWLSQWWGWRPGMLLNPILCL*LRISWM
Trigger: CATCCAGCTAATCCTCAATCACAGACACAGTATTGG...GTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAAACAGCACCACTCACTaGTTTCCTTTGGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRNSTTH*FPLGPW
Trigger: CCAGGGTCCCAAAGGAAAGCAGTGAGTGGTGCTGTT...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR GCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTGGTACGAAGTTCCTaGAGTTCATCAGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESALVRSS*SSSDSG
Trigger: CCCTGAATCTGATGAACTGCAGGAACTTCGTACCAG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCCTGCTAAATGACAACTaGTTGATTCGAGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTLLNDN*LIRGLR
Trigger: ACGAAGTCCTCGAATCAAGCAGTTGTCATTTAGCAG...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACGCGATCCTCGAGCCTaGCCTCCAGCTCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILRDPRA*PPAPPQ
Trigger: TTGAGGAGGAGCTGGAGGCCAGGCTCGAGGATCGCG...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACGCGATCCTCGAGCCTaGCCTCCAGCTCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRERDPRA*PPAPPQ
Trigger: TTGAGGAGGAGCTGGAGGCCAGGCTCGAGGATCGCG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCGTATCCAAGGTGGTCTaGGGATTCCCACAACTTAGA +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAVSKVV*GFPQLR
Trigger: TCTAAGTTGTGGGAATCCCCAGACCACCTTGGATAC...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCATCACTTCTAATTCCTTaGTGCCTTTTGATTTTAGGA +
Preference number: 4 (lower is better)
Translates to: GFTVYKALPVSQQPSLTASLLIP*CLLILG
Trigger: TCCTAAAATCAAAAGGCACCAAGGAATTAGAAGTGA...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCCTGAGACCAGGGCCTaGGTAGCCCCGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRPETRA*VAPSFR
Trigger: CCTGAAAGACGGGGCTACCCAGGCCCTGGTCTCAGG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTCCTCTTCGTCTCCCGTaGAGGGTAGCTGCCATGCAC +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLPLRLP*RVAAMH
Trigger: GTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGG...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTAACAGCAGCGGAGACTaGGTCAGAGCCTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLNSSGD*VRAWRA
Trigger: TGCCCTCCAGGCTCTGACCCAGTCTCCGCTGCTGTT...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGACGGAACTGGCACCACTaGTGTTACAGAAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRRNWHH*CYRKET
Trigger: GGTTTCCTTTCTGTAACATCAGTGGTGCCAGTTCCG...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCGAACATTTTAACGGTTaGGATCATGTTTCGAGCACA +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTEHFNG*DHVSST
Trigger: TGTGCTCGAAACATGATCTCAACCGTTAAAATGTTC...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCTGGGTATGTCGTTTTTaGGGAGTGATTTTTGAATCC +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTWVCRF*GVIFES
Trigger: GGATTCAAAAATCACTCCTCAAAAACGACATACCCA...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGCGTCCTGTGGATGCTaGGTTCAAGGCCGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREASCGC*VQGRGP
Trigger: AGGACCACGGCCTTGAACTCAGCATCCACAGGACGC...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGCTGGGGTCTTTGCTCTaGGAGGAAGGTGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRLGSLL*EEGVFP
Trigger: GGGGAAAACACCTTCCTCTCAGAGCAAAGACCCCAG...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACCACCCAGACACGAACTaGAGCAGCTCCCTCTGCGAG +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNHPDTN*SSSLCE
Trigger: CTCGCAGAGGGAGCTGCTGCAGTTCGTGTCTGGGTG...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTACTTTGGTCACTTCTTaGACTGTATCTTTCACTGGC +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFTLVTS*TVSFTG
Trigger: GCCAGTGAAAGATACAGTGCAAGAAGTGACCAAAGT...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGCAGAGTCTGTGGAATaGCAAGCTGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRAESVE*QADAGR
Trigger: CCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCCAGTTTACCAGAGCCCTCCTCTaGAAGTATTTTGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGPPDLKAYFTCETKTQFTRALL*KYFDKV
Trigger: CACCTTGTCAAAATACTTGCAGAGGAGGGCTCTGGT...AAACTGGGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGCAAACGGTTTAAAGTaGCATCAGTTGGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSANGLK*HQLAAL
Trigger: CAATGCTGCCAACTGATGCCACTTTAAACCGTTTGC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCTCTTGCTGGAAAGAGTaGACTCTTTGCACACTTCGA +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESASCWKE*TLCTLR
Trigger: TCGAAGTGTGCAAAGAGTCCACTCTTTCCAGCAAGA...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAATGAGAGATCCTTCTTaGTGTAGTTTTAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQMRDPS*CSFRKA
Trigger: AGCTTTTCTAAAACTACACCAAGAAGGATCTCTCAT...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCTTCTGCAGCCTTTCTaGAGTATACAACGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSLLQPF*SIQRSL
Trigger: CAAACTCCGTTGTATACTCCAGAAAGGCTGCAGAAG...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCCTCTTAGGAGTTCTTaGTGTCTTCGTTTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFPLRSS*CLRFKR
Trigger: TCTCTTGAAACGAAGACACCAAGAACTCCTAAGAGG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACGACTGGTCTGGGAGCTaGCACACTCCCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNDWSGS*HTPSSS
Trigger: TGAGCTCGAGGGAGTGTGCCAGCTCCCAGACCAGTC...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATTCCTGGGAGGCGACTaGTCTGGGAGCTGGCACACT +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILFLGGD*SGSWHT
Trigger: AGTGTGCCAGCTCCCAGACCAGTCGCCTCCCAGGAA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TCATCTGCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCCCATGCACTCCAACTTaGAGACCCCTCTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: SSAGPPDLKAYFTCETKTPCTPT*RPLFTL
Trigger: AAGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGG...GGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGCAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGGCTTGAACACTTTCTaGAGACTGAGAGACAGTTCA +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSGLNTF*RLRDSS
Trigger: TGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCAGACTACTTTTTACTTaGTTCAGGCAGTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: TGLNTFWRLRDSSESALTRLLFT*FRQFTS
Trigger: AGAAGTGAACTGCCTGAATCAAGTAAAAAGTAGTCT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACCAGATGGCAAGACAGTaGCACCTCCGTGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNQMARQ*HLRGGA
Trigger: TGCTCCACCACGGAGGTGGCACTGTCTTGCCATCTG...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCTGGTCTGACTTATCTTaGTGGAAAGAGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: EHNRLEHFLETERQFRVSWSDLS*WKEWTL
Trigger: AAGAGTCCACTCTTTCCAGCAAGATAAGTCAGACCA...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGGACTCCTTAAAAGCTaGCTGCTTTGTAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRGLLKS*LLCRGH
Trigger: ATGACCCCTACAAAGCAGGCAGCTTTTAAGGAGTCC...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCCCGTGGAGGGTAGCTaGCATGCACTCCAACTTGGA +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRPVEGS*HALQLG
Trigger: TCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AGATACTTTTGGTTGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTACTAAACTTTGTTTGGTTAGGGTaGTCTGAACTTCCTGAATGT +
Preference number: 4 (lower is better)
Translates to: RYFWLSQWWGWRPGMLLNFVWLG*SELPEC
Trigger: ACATTCAGGAAGTTCAGAGCACCCTAACCAAACAAA...GTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGCTGGGAGGTGGGGTaGAGCCGGAAACAAACACCT +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNSWEVG*SRKQTP
Trigger: AGGTGTTTGTTTCCGGCTCCACCCCACCTCCCAGCT...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCAGGAGGAATCAGATTTaGGAACACAACAGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESARRNQI*EHNRLE
Trigger: TTCAAGCCTGTTGTGTTCCCAAATCTGATTCCTCCT...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATTTTTCGGGCGACCATaGCTTCCCGGACTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILFFGRP*LPGLSW
Trigger: CCAAGAGAGTCCGGGAAGTCATGGTCGCCCGAAAAA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATACTTTGTGACAGCATaGCATATCGGCCGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILYFVTA*HIGRAA
Trigger: GGCGGCACGGCCGATATGGCATGCTGTCACAAAGTA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR GCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACAGTGCCCAAAGTGCTaGTCGTTGGGAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREQCPKC*SLGETT
Trigger: AGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGCCTTTGAGTTGCTGTaGTCTCCTCTGGACTTCCTA +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRAFELL*SPLDFL
Trigger: TAGGAAGTCCAGAGGAGAGCACAGCAACTCAAAGGC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGCAGCCACATCCGGACTaGCATCTGGATGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRQPHPD*HLDVTS
Trigger: AGAAGTTACATCCAGATGGCAGTCCGGATGTGGCTG...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACCATCTGTGGTACAGTaGACGTCACGGGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREPSVVQ*TSREGI
Trigger: GATGCCTTCCCGTGACGTGCACTGTACCACAGATGG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGTTGGGAGAGACCACTaGGCCACTGAGCCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLVGRDH*ATEPFR
Trigger: TCTAAAAGGCTCAGTGGCCCAGTGGTCTCTCCCAAC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATCCAATGGTGAGTCATaGCCGGGTGAGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILSNGES*PGEEES
Trigger: AGACTCCTCCTCACCCGGCCATGACTCACCATTGGA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAACTGTCTCCCATCTGTaGTACAGTGCACGTCACGGG +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRETVSHL*YSARHG
Trigger: CCCGTGACGTGCACTGTACCACAGATGGGAGACAGT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTGAGTTCAAGGCCGTaGTCCTTGCCCTCTGACTCA +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRLSSRP*SLPSDS
Trigger: TGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAAAGATGGGCGTCCTGTaGATGCTGAGTTCAAGGCCG +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILKMGVL*MLSSRP
Trigger: CGGCCTTGAACTCAGCATCCACAGGACGCCCATCTT...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACGAAGGTGTTTTCCCCTaGAACAGCAGCGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNEGVFP*NSSGDW
Trigger: CCAGTCTCCGCTGCTGTTCCAGGGGAAAACACCTTC...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGCTTTATTCCACTCCTaGGCAGCATTTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLALFHS*AAFPQL
Trigger: AAGCTGGGGAAATGCTGCTCAGGAGTGGAATAAAGC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTCCAAGGGCTCTAGGGTaGCTGTCCATGTTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLPRALG*LSMFLE
Trigger: TTCAAGAAACATGGACAGTCACCCTAGAGCCCTTGG...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTCCTTCTCTTCTTGGCTaGTCTGGTACGAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLPSLLG*SGTKFL
Trigger: CAGGAACTTCGTACCAGATCAGCCAAGAAGAGAAGG...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTTGGAGAAAGCGCGACTaGAAGGAGAGTCTTCTACAG +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLWRKRD*KESLLQ
Trigger: CTGTAGAAGACTCTCCTTTCAGTCGCGCTTTCTCCA...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTCTCTTGGACAGTCCTTaGAAATGTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLLLDSP*KCGCSR
Trigger: TCTGGAGCAGCCACATTTTCAAGGACTGTCCAAGAG...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAGGGAGTCTGGTAAGCTaGAGGTACCTCCGAATCCAA +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILGSLVS*RYLRIQ
Trigger: TTGGATTCGGAGGTACCTGCAGCTTACCAGACTCCC...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGGACTCCTTAAAAGCTaGCTGCTTTGTAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRGLLKS*LLCRGH
Trigger: ATGACCCCTACAAAGCAGGCAGCTTTTAAGGAGTCC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGAGAGGTACCTTCTCCTaGCTGGGTATGTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRRGTFS*LGMSFL
Trigger: CAAAAACGACATACCCAGGCAGGAGAAGGTACCTCT...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGTATCCAAGGTGGTCTaGGGATTCCCACAACTTAGA +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRVSKVV*GFPQLR
Trigger: TCTAAGTTGTGGGAATCCCCAGACCACCTTGGATAC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACACAGTGCCACCTCCGTaGTGGAGCAGTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNTVPPP*WSSSQT
Trigger: TGTTTGTGAACTGCTCCACCACGGAGGTGGCACTGT...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTCCACGATGCTCCTTCTaGGATCAGAGGTCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLPRCSF*DQRSFY
Trigger: GTAGAAAGACCTCTGATCCCAGAAGGAGCATCGTGG...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAATCTTCCCACTGTGCTTaGGGGATGGTGTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRESSHCA*GMVSKE
Trigger: TTCCTTGGACACCATCCCCCAAGCACAGTGGGAAGA...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACCACATCCTCATCTCTaGGGTCTTTGCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREPHPHL*GLCSER
Trigger: CCTCTCAGAGCAAAGACCCCAGAGATGAGGATGTGG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGAGCAGCATTACTTTGTaGCAGCATGCCATATCGGCC +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRSSITL*QHAISA
Trigger: GGCCGATATGGCATGCTGTCACAAAGTAATGCTGCT...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR TCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAGGAACCCCATCTGTTTaGAATGGAGAGGGGGTACTA +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILGTPSV*NGEGVL
Trigger: TAGTACCCCCTCTCCATTTCAAACAGATGGGGTTCC...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACTCTTGGACAGTCCTTaGAAATGTGGCTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRELLDSP*KCGCSR
Trigger: TCTGGAGCAGCCACATTTTCAAGGACTGTCCAAGAG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAGCCTTTGAGTTGCTGTaGTCTCCTCTGGACTTCCTA +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILAFELL*SPLDFL
Trigger: TAGGAAGTCCAGAGGAGAGCACAGCAACTCAAAGGC...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCATCAGATTCAGGGCTaGCTGACACTGATCTACGAG +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRHQIQG*LTLIYE
Trigger: CTCGTAGATCAGTGTCAGGCAGCCCTGAATCTGATG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACTTGGAGATCTGCTTATaGACTGGAGTCTCGGCCACA +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNLEICL*TGVSAT
Trigger: TGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAA...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTTTTGCAGGGGACTTCTaGAGCCTTTCTGGAGTATAC +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLFAGDF*SLSGVY
Trigger: GTATACTCCAGAAAGGCTGCAGAAGTCCCCTGCAAA...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCTTTCTTGAATCTCTTTaGCTTCAACAGGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAFLESL*LQQGEI
Trigger: TATTTCTCCCTGTTGAAGGCAAAGAGATTCAAGAAA...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560985.5
CDS-3UTR CCA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGGGGAAAGCAATTCCTaGTTGAAAAGATTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: IWEHNRLEHFLETERQFRGESNS*LKRFLR
Trigger: TCGAAGAAATCTTTTCAACCAGGAATTGCTTTCCCC...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGATCTGCTTATGCACTaGAGTCTCGGCCACACTCTT +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREDLLMH*SLGHTL
Trigger: AAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATC...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGTCTGGTGACTCTTCTTaGGAGTCTGGTAAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRSGDSS*ESGKLQ
Trigger: CTGCAGCTTACCAGACTCCCAAGAAGAGTCACCAGA...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAATGGCAAAAGAGGCTTaGGACCAGGCATCCAACTTC +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREMAKEA*DQASNF
Trigger: GAAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCAT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAACTCAAGCTGGACCATaGTCACAGTTAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRETQAGP*SQLTSG
Trigger: GCCTGAGGTTAACTGTGACCATGGTCCAGCTTGAGT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTAGAAGCCACTCAAGCTaGACCATGGTCACAGTTAAC +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLRSHSS*TMVTVN
Trigger: GTTAACTGTGACCATGGTCCAGCTTGAGTGGCTTCT...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACTCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNSWLTP*SFGLSN
Trigger: ATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGA...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACTGGTACGAAGTTCCTaGAGTTCATCAGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRELVRSS*SSSDSG
Trigger: CCCTGAATCTGATGAACTGCAGGAACTTCGTACCAG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACCCTTGATTTGTCTGTaGAGCAGCCTTTTGGAGATC +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILPLICL*SSLLEI
Trigger: GATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGG...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAAAAGAGTGGACTCTTTaGACACTTCGAGACTTCGGC +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREKEWTL*TLRDFG
Trigger: GCCGAAGTCTCGAAGTGTGCAAAGAGTCCACTCTTT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCATTCCTTCCATTCGTaGAAACGAGGCCTCATACTC +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRHSFHS*KRGLIL
Trigger: GAGTATGAGGCCTCGTTTCCACGAATGGAAGGAATG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTTCTTGCTGGAAAGAGTaGACTCTTTGCACACTTCGA +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLSCWKE*TLCTLR
Trigger: TCGAAGTGTGCAAAGAGTCCACTCTTTCCAGCAAGA...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGCCTCTTAGGAGTTCTTaGTGTCTTCGTTTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRPLRSS*CLRFKR
Trigger: TCTCTTGAAACGAAGACACCAAGAACTCCTAAGAGG...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACGAGCAAAATCCCAGCTaGAAGATTCAGATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNEQNPS*KIQMAR
Trigger: TCTTGCCATCTGAATCTTTCAGCTGGGATTTTGCTC...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACATCCACGGAGAAAGATaGGGTTCACTTGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNIHGER*GSLDSF
Trigger: AAAGCTGTCAAGTGAACCTCATCTTTCTCCGTGGAT...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAATCCACGGAGAAAGATaGGGTTCACTTGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREIHGER*GSLDSF
Trigger: AAAGCTGTCAAGTGAACCTCATCTTTCTCCGTGGAT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAATGTGTCCTGCTAAATaGCAACTGCTTGATTCGAGG +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREMCPAK*QLLDSR
Trigger: CCTCGAATCAAGCAGTTGTCATTTAGCAGGACACAT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGTCGTTTTTGAGGAGTaGTTTTTGAATCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRVVFEE*FLNPMV
Trigger: CACCATTGGATTCAAAAATCACTCCTCAAAAACGAC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACTTTTCAAGTCACCAATaGCATGGTGTTCGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNFSSHQ*HGVRLH
Trigger: GTGAAGCCGAACACCATGGCATTGGTGACTTGAAAA...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTTCTGACTTATCTTGCTaGAAAGAGTGGACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLSDLSC*KEWTLC
Trigger: GCAAAGAGTCCACTCTTTCCAGCAAGATAAGTCAGA...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACTGATCCAGTTCTCCTaGGGAAGGACACTCTATTTT +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRELIQFS*GRTLYF
Trigger: AAAATAGAGTGTCCTTCCCCAGGAGAACTGGATCAG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAAAGATGAGGTTCACTTaGCAGCTTTATTCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILKMRFT*QLYSTP
Trigger: AGGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTT...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTGCTAAATGACAACTaGTTGATTCGAGGACTTCGT +
Preference number: 4 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRLLNDN*LIRGLR
Trigger: ACGAAGTCCTCGAATCAAGCAGTTGTCATTTAGCAG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAATCCAAAGTGTTTCTTaGACGCTTTTTCATTCGAGC +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILIQSVS*TLFHSS
Trigger: GCTCGAATGAAAAAGCGTTCAAGAAACACTTTGGAT...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR TCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAACTGTCCATGTTTCTTaGATCTCTTTGCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHRETVHVS*ISLPST
Trigger: TGTTGAAGGCAAAGAGATTCAAGAAACATGGACAGT...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560985.5
CDS-3UTR GCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTAAAAAATAGCTTCCACTaGCCAATGCACTCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILKNSFH*PMHSSV
Trigger: AACTGAAGAGTGCATTGGGCAGTGGAAGCTATTTTT...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATTAAGGAACGGCACATaGTATTCATCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILLRNGT*YSSSVS
Trigger: TGAGACAGAAGATGAATACCATGTGCCGTTCCTTAA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACGGAGAATTTTCTCTTTaGTCTGACTTATCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNGEFSL*SDLSCW
Trigger: CCAGCAAGATAAGTCAGACCAAAGAGAAAATTCTCC...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CCA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACAAAAAGAAGACTCTTaGGAGACCGAATACTTTGGA +
Preference number: 4 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILQKEDS*ETEYFG
Trigger: TCCAAAGTATTCGGTCTCCCAAGAGTCTTCTTTTTG...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR GCA 90 bp AAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAACAAAAATGTACTGAGTaGTCAGTCACTAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: KNVLSAQSLEMILLLHREQKCTE*SVTRDD
Trigger: ATCATCTCTAGTGACTGAGCACTCAGTACATTTTTG...TTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp AGGCCCAGTGGACCCTGGCCAGGCCGAATCGGCAACTCAGATAGGTaGGGAGGCGCAGGGCGGCCCGCCGGACCCGGCTGTGGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: RPSGPWPGRIGNSDR*GGAGRPAGPGCGGR
Trigger: CCGCCCGCCACAGCCGGGTCCGGCGGGCCGCCCTGCGCCTCCTCACCTATCTGAGTTGCCGATTCGGCCTGGCCAGGGTCCACTGGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp AGTCTAGCAGCGTCTCCATCAGGGCGCCGTGCGTGTGGGTGGCCCTaGGCGCCGGGCCGGGCAGGTGGGCGCGATCCTCGAGCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: SLAASPSGRRACGWP*APGRAGGRDPRAWP
Trigger: AGGCCAGGCTCGAGGATCGCGCCCACCTGCCCGGCCCGGCGCCCAGGGCCACCCACACGCACGGCGCCCTGATGGAGACGCTGCTAGACT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGGCGGCCTCGGCCTCCTaGGCCTCGCTCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGAASAS*ASLSTS
Trigger: GGACGTGGAGAGCGAGGCCAAGGAGGCCGAGGCCGC...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp GTGGGCGGCAGGCGCTGGGCCTGGGCCTCGCACCCAGACACGAACTaGAGCAGCTCCCTCTGCGAGTGCGGACAGGGGGCCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VGGRRWAWASHPDTN*SSSLCECGQGARRK
Trigger: CTTCCTCCTGGCCCCCTGTCCGCACTCGCAGAGGGAGCTGCTGCAGTTCGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCTGCCGCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp GGAAGACGGCGTTCACCAAGCCCCCGAGCGCGGCCTCGGCCTCCTTaGCCTCGCTCTCCACGTCCAGCAGTCTCCTCCCGCTGCTCCGCA +
Preference number: 5 (lower is better)
Translates to: GRRRSPSPRARPRPP*PRSPRPAVSSRCSA
Trigger: TGCGGAGCAGCGGGAGGAGACTGCTGGACGTGGAGAGCGAGGCCAAGGAGGCCGAGGCCGCGCTCGGGGGCTTGGTGAACGCCGTCTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp AGCTCGCGGAAGTCAGACACGCGGGACGGCCGGCTCCGCGCCCCCTaGGAGTCAAAGAACTTGAAGGCCCAGTGGACCCTGGCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SSRKSDTRDGRLRAP*ESKNLKAQWTLARP
Trigger: CGGCCTGGCCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGTCCCGCGTGTCTGACTTCCGCGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCCAAAGTGCTGCTCGTaGGGAGAGACCACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGPKCCS*GETTGP
Trigger: TGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGG...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp TGGGCCTGGGCCTCGCACCCAGACACGAACTGCAGCAGCTCCCTCTaGGAGTGCGGACAGGGGGCCAGGAGGAAGACGGCGTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: WAWASHPDTNCSSSL*ECGQGARRKTAFTK
Trigger: CTTGGTGAACGCCGTCTTCCTCCTGGCCCCCTGTCCGCACTCGCAGAGGGAGCTGCTGCAGTTCGTGTCTGGGTGCGAGGCCCAGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCGGGAAGGCCAGAAGCTaGCATCTCCAGCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGGKARS*HLQLNL
Trigger: GAGGTTGAGCTGGAGATGCAAGCTTCTGGCCTTCCC...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp ACACGCGGGACGGCCGGCTCCGCGCCCCCTGCGAGTCAAAGAACTTaGAGGCCCAGTGGACCCTGGCCAGGCCGAATCGGCAACTCAGAT +
Preference number: 5 (lower is better)
Translates to: TRGTAGSAPPASQRT*RPSGPWPGRIGNSD
Trigger: ATCTGAGTTGCCGATTCGGCCTGGCCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGTCCCGCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp GGCAACAACTTCTCCATCACCTGCTTAGGGGTGGGCGGCAGGCGCTaGGCCTGGGCCTCGCACCCAGACACGAACTGCAGCAGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GNNFSITCLGVGGRR*AWASHPDTNCSSSL
Trigger: GAGGGAGCTGCTGCAGTTCGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCTGCCGCCCACCCCTAAGCAGGTGATGGAGAAGTTGTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp GCAGTCTCCTCCCGCTGCTCCGCAGGATCGGCTTCGTGGGCGACGTaGTCTCGGGCCGGTCCCACTGGTAGTCTAGCAGCGTCTCCATCA +
Preference number: 5 (lower is better)
Translates to: AVSSRCSAGSASWAT*SRAGPTGSLAASPS
Trigger: TGATGGAGACGCTGCTAGACTACCAGTGGGACCGGCCCGAGATCACGTCGCCCACGAAGCCGATCCTGCGGAGCAGCGGGAGGAGACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGGGACCTGCCCTTGATTaGTCTGTGCAGCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGGPALD*SVQQPF
Trigger: AAAAGGCTGCTGCACAGACAAATCAAGGGCAGGTCC...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGAGGCGGCTGAGTACCTaGCCTCTTAGGAGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: LARTRSRLVQRVCGALLWRRLST*PLRSSW
Trigger: CCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTGGGCAGTCGATGAAGTaGGAGGGGCTGGACAGGAGG +
Preference number: 5 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFGQSMK*EGLDRR
Trigger: CCTCCTGTCCAGCCCCTCCAACTTCATCGACTGCCC...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCGAGGACATGGGGCTGTaGGTGTGTTTGATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGEDMGL*VCLILR
Trigger: CCTCAGAATCAAACACACCAACAGCCCCATGTCCTC...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGGAGGACATGGGGCTGTaGGTGTGTTTGATTCTGAGG +
Preference number: 5 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGEDMGL*VCLILR
Trigger: CCTCAGAATCAAACACACCAACAGCCCCATGTCCTC...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTGCTGATGCTGGCAGGTaGTCTAGTTGTGCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPADAGR*SSCAEA
Trigger: GGCTTCGGCACAACTAGACAACCTGCCAGCATCAGC...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGAGGAACCCCATCTGTTaGAAATGGAGAGGGGGTACT +
Preference number: 5 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGRNPIC*KWRGGT
Trigger: AGTACCCCCTCTCCATTTCAAACAGATGGGGTTCCT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TCCTCCTCAGCGGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATTCTCGATGGGCTGACTaGGCCCTTGGGACGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SSSAARVGRCLMAAAPADSRWAD*ALGTRG
Trigger: TCCCCTCGTCCCAAGGGCCAAGTCAGCCCATCGAGA...ATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCCGCTGAGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGATAACAGCCTTTGAGTaGCTGTGCTCTCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LARTRSRLVQRVCGALLWITAFE*LCSPLD
Trigger: GTCCAGAGGAGAGCACAGCAACTCAAAGGCTGTTAT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTCGGTCAGCTTCTTCCTaGGCCAACAGGACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VSQQPSLTAAQGTPGRAPRSASS*ANRTLF
Trigger: GAAGAGAGTCCTGTTGGCCAAGGAAGAAGCTGACCG...AGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCCATCAGTTGGCAGCATaGAAATCCACGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGHQLAA*KSTEKD
Trigger: ATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATG...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAATCAGAGGACCTGCCCTaGATTTGTCTGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AGWSSGSVGHSCGALLVESEDLP*ICLCSS
Trigger: GCTGCTGCACAGACAAATCAAGGGCAGGTCCTCTGA...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCGGGAGACCGAATACTTaGGACTGGAGAATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGGRPNT*DWRIFS
Trigger: AGAGAAAATTCTCCAGTCCAAAGTATTCGGTCTCCC...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGGGGAAGAAGTCACAGTaGAATTCCCTGGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGGKKSQ*NSLVFL
Trigger: CAAAAAGACCAGGGAATTCAACTGTGACTTCTTCCC...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGAAAGATGAGGTTCACTaGACAGCTTTATTCCACTCC +
Preference number: 5 (lower is better)
Translates to: GQDPQQAGPAGLWGTPVGKDEVH*TALFHS
Trigger: GGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTTT...CCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TGGCTGGGTCTTGGGACAGGTGGTGACGCTCCGAGAGGAGCAGCACCAGCAGCACGGTCAGCTTCTTCCTaGGCCAACAGGACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: WLGLGTGGDAPRGAAPAARSASS*ANRTLF
Trigger: GAAGAGAGTCCTGTTGGCCAAGGAAGAAGCTGACCG...TGCTGCTGGTGCTGCTCCTCTCGGAGCGTCACCACCTGTCCCAAGACCCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCAAGTTGTGGCTACGTGTaGGCTGTTGCATGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPSCGYV*AVACLP
Trigger: GGGCAGACATGCAACAGCCAACACGTAGCCACAACT...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp CGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGACCCTTAAGGCCCAGTaGTGGCTACGTGTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: RARLCRRSGRCSSWMRPSTLKAQ*WLRVGC
Trigger: ACAGCCAACACGTAGCCACAACTGGGCCTTAAGGGT...CGATGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS CCA 90 bp GCAGGTTGTCTAGTTGTGCCGAAGCCTGGCACTGTCTCCCATCTGTaGTACAGTGCACGTCACGGGAAGGCATCAGAGGAGAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AGCLVVPKPGTVSHL*YSARHGKASEESQA
Trigger: GGCCTGGCTCTCCTCTGATGCCTTCCCGTGACGTGCACTGTACCACAGATGGGAGACAGTGCCAGGCTTCGGCACAACTAGACAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAATAACAGCCTTTGAGTaGCTGTGCTCTCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEITAFE*LCSPLD
Trigger: GTCCAGAGGAGAGCACAGCAACTCAAAGGCTGTTAT...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCGCTGATGCTGGCAGGTaGTCTAGTTGTGCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLADAGR*SSCAEA
Trigger: GGCTTCGGCACAACTAGACAACCTGCCAGCATCAGC...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCTCAAGGCCGTGGTCCTaGCCCTCTGACTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLSRPWS*PSDSSS
Trigger: ACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGA...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp ACGCGTGCCCGTCTCTGCAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCACATGGCAAAAGAGGCTaGGGACCAGGCATCCAACTT +
Preference number: 5 (lower is better)
Translates to: TRARLCRRSGRCSSWMRPHGKRG*GPGIQL
Trigger: AAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCATG...TGGCCTCATCCAACTGGAACAGCGTCCGCTCCTCCTGCAGAGACGGGCACGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp TGGCTGGGTCTTGGGACAGGTGGTGACGCTCCGAGAGGAGCAGCACCAGCAGCATCCTCTGCAAGTATTTaGACAAGGTGGGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WLGLGTGGDAPRGAAPAASSASI*TRWASS
Trigger: GCTGCTGGCCCACCTTGTCAAAATACTTGCAGAGGA...TGCTGCTGGTGCTGCTCCTCTCGGAGCGTCACCACCTGTCCCAAGACCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp GATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCAGAGCCCTCGGGCCTCAGCCTCGTaGCTGTCCCAGTGCGAGATG +
Preference number: 5 (lower is better)
Translates to: DEPHGQAQLPLILRDQSPRASAS*LSQCEM
Trigger: CATCTCGCACTGGGACAGCAACGAGGCTGAGGCCCG...AGGGCTCTGGTCTCTGAGGATGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS TCA 90 bp GGGCTGTCAGCTGTGCCAACCCCAGGAGTAGCGGAGGCATCAGGCTaGCACTCCACGATGCTCCTTCTGGGATCAGAGGTCTTTCTACAC +
Preference number: 5 (lower is better)
Translates to: GLSAVPTPGVAEASG*HSTMLLLGSEVFLH
Trigger: GTGTAGAAAGACCTCTGATCCCAGAAGGAGCATCGTGGAGTGTCAGCCTGATGCCTCCGCTACTCCTGGGGTTGGCACAGCTGACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp GAGTTGCTGTGCTCTCCTCTGGACTTCCTAGCATCCAGCTGTCAGTaGCCAAAGTGCTGCTCGTTGGGAGAGACCACTGGGCCACTGAGC +
Preference number: 5 (lower is better)
Translates to: ELLCSPLDFLASSCQ*PKCCSLGETTGPLS
Trigger: GCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCACAGCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp TCCACAACAGCTGGACTCCAGGGAGTGGTGTGGCCAAGCTCCTGCTaGGCCCACTCTGGAACAGGAGAAGCAGCAGAAGCAGTATCTGCA +
Preference number: 5 (lower is better)
Translates to: STTAGLQGVVWPSSC*AHSGTGEAAEAVSA
Trigger: TGCAGATACTGCTTCTGCTGCTTCTCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCAGCTGTTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp GTTCTGAGAGGGTCTCTGATGGGAGTGAGACACTCTCTCCTGGGCTaGGCAGTCGATGAAGTTGGAGGGGCTGGACAGGAGGGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: VLRGSLMGVRHSLLG*AVDEVGGAGQEGLS
Trigger: AGAAAGCCCCTCCTGTCCAGCCCCTCCAACTTCATCGACTGCCCAGCCCAGGAGAGAGTGTCTCACTCCCATCAGAGACCCTCTCAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp TGGGAGGTGGGGTGGAGCCGGAAACAAACACCTCTTCGTCTCCCGTaGAGGGTAGCTGCCATGCACTCCAACTTGGAGACCCCTCTTTAC +
Preference number: 5 (lower is better)
Translates to: WEVGWSRKQTPLRLP*RVAAMHSNLETPLY
Trigger: GTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGGTGTTTGTTTCCGGCTCCACCCCACCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCTGTGGCCACAGTCTTTaGGTAATTTTCACGTATATA +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGCGHSL*VIFTYI
Trigger: TATATACGTGAAAATTACCAAAAGACTGTGGCCACA...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CTGGCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGAGATTTCTTCGAACTTaGGTCACTTCTTGCACTGTA +
Preference number: 5 (lower is better)
Translates to: LARTRSRLVQRVCGALLWRFLRT*VTSCTV
Trigger: TACAGTGCAAGAAGTGACCAAAGTTCGAAGAAATCT...CCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGGACCTGCCCTTGATTaGTCTGTGCAGCAGCCTTTT +
Preference number: 5 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDGPALD*SVQQPF
Trigger: AAAAGGCTGCTGCACAGACAAATCAAGGGCAGGTCC...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCCAGGACCCGCAGCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCAATCCAAAGTGTTTCTaGAACGCTTTTTCATTCGAG +
Preference number: 5 (lower is better)
Translates to: ARTRSRLVQRVCGALLWGNPKCF*NAFSFE
Trigger: CTCGAATGAAAAAGCGTTCAAGAAACACTTTGGATT...GCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGCTGCGGGTCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGGGCTGTTGGTGTGTTaGATTCTGAGGCGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: LPSTSPPATSPTRGRARRGLLVC*ILRRAH
Trigger: ATGGGCACGCCTCAGAATCAAACACACCAACAGCCC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCTGGCAGATGTAGGTTaGCCCCCTGCTCTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QGTPGRAPFSICINEAEWLADVG*PPALAR
Trigger: CCTGGCAAGAGCAGGGGGCAAACCTACATCTGCCAG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCACGTGTGGGGAGGTGTCTCATGGCAGCTGCTCCAGCGGATATCCCGTTTCCATCATTCACAGAGGCTaGCAGTTGAGCAGGCCACCT +
Preference number: 5 (lower is better)
Translates to: GTCGEVSHGSCSSGYPVSIIHRG*QLSRPP
Trigger: AGGTGGCCTGCTCAACTGCAAGCCTCTGTGAATGAT...GGAAACGGGATATCCGCTGGAGCAGCTGCCATGAGACACCTCCCCACACGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS CCA 90 bp GAATGCCAAGCTGATGCTGGCAGGTTGTCTAGTTGTGCCGAAGCCTaGCACTGTCTCCCATCTGTGGTACAGTGCACGTCACGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: ECQADAGRLSSCAEA*HCLPSVVQCTSREG
Trigger: GCCTTCCCGTGACGTGCACTGTACCACAGATGGGAGACAGTGCCAGGCTTCGGCACAACTAGACAACCTGCCAGCATCAGCTTGGCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp AAATCCTCCAAGATGGGCGTCCTGTGGATGCTGAGTTCAAGGCCGTaGTCCTTGCCCTCTGACTCAAGCAGTGACAGGCTCCCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSSKMGVLWMLSSRP*SLPSDSSSDRLPGR
Trigger: CCTTCCTGGGAGCCTGTCACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCCCATCTTGGAGGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CCA 90 bp TGGCACACTCCCTCGAGCTCAAAATCCTCCAAGATGGGCGTCCTGTaGATGCTGAGTTCAAGGCCGTGGTCCTTGCCCTCTGACTCAAGC +
Preference number: 5 (lower is better)
Translates to: WHTPSSSKSSKMGVL*MLSSRPWSLPSDSS
Trigger: GCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCCCATCTTGGAGGATTTTGAGCTCGAGGGAGTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CCA 90 bp TGGCTCCACGGTCAGCTTCTTCCTTGGCCAACAGGACTCTCTTCCTaGAACTCAACCCAAACTGTCCCCAGGAAGAGGCTTCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: WLHGQLLPWPTGLSS*NSTQTVPRKRLPRP
Trigger: AGGCCGAGGAAGCCTCTTCCTGGGGACAGTTTGGGTTGAGTTCCAGGAAGAGAGTCCTGTTGGCCAAGGAAGAAGCTGACCGTGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CAA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACATCAGTTGGCAGCATaGAAATCCACGGAGAAAGAT +
Preference number: 5 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEHQLAA*KSTEKD
Trigger: ATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACCAAAAAGAAGACTCTaGGGAGACCGAATACTTTGG +
Preference number: 5 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEPKRRL*GDRILW
Trigger: CCAAAGTATTCGGTCTCCCAAGAGTCTTCTTTTTGG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGGGAAGGCCAGAAGCTaGCATCTCCAGCTCAACCTC +
Preference number: 5 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAGKARS*HLQLNL
Trigger: GAGGTTGAGCTGGAGATGCAAGCTTCTGGCCTTCCC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGTCCTGTGGGGCACTCTaGGTGGAAACGATGAGCCAG +
Preference number: 5 (lower is better)
Translates to: QGTPGRAPFSICINEAEWSCGAL*VETMSQ
Trigger: CTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGA...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CTCCCTCGAGCTCAAAATCCTCCAAGATGGGCGTCCTGTGGATGCTaGGTTCAAGGCCGTGGTCCTTGCCCTCTGACTCAAGCAGTGACA +
Preference number: 5 (lower is better)
Translates to: LPRAQNPPRWASCGC*VQGRGPCPLTQAVT
Trigger: TGTCACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCCCATCTTGGAGGATTTTGAGCTCGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS GCA 90 bp ATGGGGCTGTTGGTGTGTTTGATTCTGAGGCGTGCCCATGAAGGCTaGTGCTCTCGGAGGTGTTCTGAGAGGGTCTCTGATGGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: MGLLVCLILRRAHEG*CSRRCSERVSDGSE
Trigger: CTCACTCCCATCAGAGACCCTCTCAGAACACCTCCGAGAGCAGCAGCCTTCATGGGCACGCCTCAGAATCAAACACACCAACAGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp AAAGGAAACCACTTTTCCACAACAGCTGGACTCCAGGGAGTGGTGTaGCCAAGCTCCTGCTGGGCCCACTCTGGAACAGGAGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: KGNHFSTTAGLQGVV*PSSCWAHSGTGEAA
Trigger: TGCTGCTTCTCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCAGCTGTTGTGGAAAAGTGGTTTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAACTCACTGCTTTCCTTaGGGACCCTGGTCGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GFTVYKALPVSQQPSLTATHCFP*GPWSKG
Trigger: GCCTTTCGACCAGGGTCCCAAAGGAAAGCAGTGAGT...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS-3UTR CAA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCATGCGAGTCAAAGAACTaGAAGGCCCAGTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: GFTVYKALPVSQQPSLTACESKN*KAQWTL
Trigger: CAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCA...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GTCGCAGCAGCCCAGCCTTACAGCAGCTCAAGGGACCCCAGGGAGGGCGCCTTTAAAGATGAGGTTCACTaGACAGCTTTATTCCACTCC +
Preference number: 5 (lower is better)
Translates to: VAAAQPYSSSRDPREGAFKDEVH*TALFHS
Trigger: GGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTTT...AAAGGCGCCCTCCCTGGGGTCCCTTGAGCTGCTGTAAGGCTGGGCTGCTGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAGCTTTAGTGATCTCTTaGAAGGGGAAAGCAATTCCT +
Preference number: 5 (lower is better)
Translates to: AGWSSGSVGHSCGALLVEALVIS*KGKAIP
Trigger: AGGAATTGCTTTCCCCTTCAAAGAGATCACTAAAGC...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATCTGTGCAGCAGCCTTTaGGAGATCTGCTTATGCACT +
Preference number: 5 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDLCSSL*EICLCT
Trigger: AGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAG...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGACTGTGCAGCAGCCTTTaGGAGATCTGCTTATGCACT +
Preference number: 5 (lower is better)
Translates to: LPSTSPPATSPTRGRARRLCSSL*EICLCT
Trigger: AGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAG...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGAAAGAGTGGACTCTTaGCACACTTCGAGACTTCGG +
Preference number: 5 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGERVDS*HTSRLR
Trigger: CCGAAGTCTCGAAGTGTGCAAAGAGTCCACTCTTTC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAATCCTGTGGGGCACTCTaGGTGGAAACGATGAGCCAG +
Preference number: 5 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQSCGAL*VETMSQ
Trigger: CTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGA...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGAGGGAACACAACAGGCTaGAACACTTTCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGGNTTG*NTFWRL
Trigger: CAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCC...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp TGCTCTCCTCTGGACTTCCTAGCATCCAGCTGTCAGTGCCCAAAGTaGTGCTCGTTGGGAGAGACCACTGGGCCACTGAGCCTTTTAGAA +
Preference number: 5 (lower is better)
Translates to: CSPLDFLASSCQCPK*CSLGETTGPLSLLE
Trigger: TTCTAAAAGGCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp GCATCTCCAGCTCAACCTCATAGGTCTGTGGGCTGGCAGAGTCTGTaGAATGCCAAGCTGATGCTGGCAGGTTGTCTAGTTGTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: ASPAQPHRSVGWQSL*NAKLMLAGCLVVPK
Trigger: CTTCGGCACAACTAGACAACCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGCCAGCCCACAGACCTATGAGGTTGAGCTGGAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp ACAGCCCACCGCCCTCTTCCTCCTGGGCCAGTCTTTAATTATGTCTaGAGTTGTCTTCCCACTGTGCTTGGGGGATGGTGTCCAAGGAAC +
Preference number: 5 (lower is better)
Translates to: TAHRPLPPGPVFNYV*SCLPTVLGGWCPRN
Trigger: GTTCCTTGGACACCATCCCCCAAGCACAGTGGGAAGACAACTCCAGACATAATTAAAGACTGGCCCAGGAGGAAGAGGGCGGTGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCAGGCTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAACTAAATGGACTCTTCTaGGAGACATCACATAAAGGA +
Preference number: 5 (lower is better)
Translates to: AGWSSGSVGHSCGALLVELNGLF*ETSHKG
Trigger: TCCTTTATGTGATGTCTCCAAGAAGAGTCCATTTAG...TTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCCATGCACTCCAACTaGGAGACCCCTCTTTACTCT +
Preference number: 5 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAAMHSN*ETPLYS
Trigger: AGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGGCCATGCACTCCAACTaGGAGACCCCTCTTTACTCT +
Preference number: 5 (lower is better)
Translates to: QGTPGRAPFSICINEAEWAMHSN*ETPLYS
Trigger: AGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGC...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TCGTTGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCAAGCACCAGCAGCAGATaGCCTTCTCGGAACTGGAGA +
Preference number: 5 (lower is better)
Translates to: SLLSQCEMNLMAKLSYLSSTSSR*PSRNWR
Trigger: TCTCCAGTTCCGAGAAGGCAATCTGCTGCTGGTGCT...TGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCGGACGCTGTTCCAGTaGGATGAGGCCATCGAGGCC +
Preference number: 5 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFRTLFQ*DEAIEA
Trigger: GGCCTCGATGGCCTCATCCAACTGGAACAGCGTCCG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATTTAAAGTGGCATCAGTaGGCAGCATTGAAATCCACG +
Preference number: 5 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDLKWHQ*AALKST
Trigger: CGTGGATTTCAATGCTGCCAACTGATGCCACTTTAA...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCACCCACTAGGTATCTTTaGGATTCCTTTCTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAPTRYL*DSFLPS
Trigger: GCTGGGGAGAAAGGAATCCAAAAGATACCTAGTGGG...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAGAGTGGCCCCCTGACTTGCCAAGGTCATGGTTGGGGTGAGGCTGGAATGGGACTAAATGACAACTGCTaGATTCGAGGACTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: QSGPLTCQGHGWGEAGMGLNDNC*IRGLRL
Trigger: GAGACGAAGTCCTCGAATCAAGCAGTTGTCATTTAG...TCCCATTCCAGCCTCACCCCAACCATGACCTTGGCAAGTCAGGGGGCCACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGAGGGAGACCGAATACTTaGGACTGGAGAATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LPSTSPPATSPTRGRARRGRPNT*DWRIFS
Trigger: AGAGAAAATTCTCCAGTCCAAAGTATTCGGTCTCCC...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATAGTATACAACGGAGTTaGTGGTGTATGAGAGATCCT +
Preference number: 5 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDSIQRS*WCMRDP
Trigger: AGGATCTCTCATACACCACAAACTCCGTTGTATACT...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGGGCAGTCGATGAAGTaGGAGGGGCTGGACAGGAGG +
Preference number: 5 (lower is better)
Translates to: EHNRLEHFLETERQFRVSGQSMK*EGLDRR
Trigger: CCTCCTGTCCAGCCCCTCCAACTTCATCGACTGCCC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTAGAGAGCTCTCCTCCTaGCTGAGGGGCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFRELSS*LRGSAS
Trigger: AGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCTCTCT...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTGGCTGTTGCATGTCTGCCCAGGACTTCAGCATTCAGGCAGTGGGTGCTGTTCAGGTCACAGATCCTTTaGGCTCCACGGTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LAVACLPRTSAFRQWVLFRSQIL*APRSAS
Trigger: AGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACCT...GAACAGCACCCACTGCCTGAATGCTGAAGTCCTGGGCAGACATGCAACAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp TCGTTGCTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCAGCCATGCACTCCAACTaGGAGACCCCTCTTTACTCT +
Preference number: 5 (lower is better)
Translates to: SLLSQCEMNLMAKLSYLSAMHSN*ETPLYS
Trigger: AGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGC...TGAGAGGTAGCTGAGCTTGGCCATGAGGTTCATCTCGCACTGGGACAGCAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS GCA 90 bp TCTCCTCTGGACTTCCTAGCATCCAGCTGTCAGTGCCCAAAGTGCTaGTCGTTGGGAGAGACCACTGGGCCACTGAGCCTTTTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: SPLDFLASSCQCPKC*SLGETTGPLSLLEK
Trigger: TTTTTCTAAAAGGCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp GTGGAGCCGGAAACAAACACCTCTTCGTCTCCCGTGGAGGGTAGCTaGCATGCACTCCAACTTGGAGACCCCTCTTTACTCTTACTAACT +
Preference number: 5 (lower is better)
Translates to: VEPETNTSSSPVEGS*HALQLGDPSLLLLT
Trigger: AGTTAGTAAGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGGTGTTTGTTTCCGGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGCGGCCTCGGCCTCCTaGGCCTCGCTCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLAASAS*ASLSTS
Trigger: GGACGTGGAGAGCGAGGCCAAGGAGGCCGAGGCCGC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGACCTTCACATTCAGCCTaGCGACATTCAACATCTTTA +
Preference number: 5 (lower is better)
Translates to: LPSTSPPATSPTRGRARRPSHSA*RHSTSL
Trigger: TAAAGATGTTGAATGTCGCAAGGCTGAATGTGAAGG...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCTTTTTCCTTCTCTTCTaGGCTGATCTGGTACGAAGT +
Preference number: 5 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLFFLLF*ADLVRS
Trigger: ACTTCGTACCAGATCAGCCAAGAAGAGAAGGAAAAA...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTGGCAGATGTAGGTTaGCCCCCTGCTCTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: NTTGLNTFWRLRDSSESALADVG*PPALAR
Trigger: CCTGGCAAGAGCAGGGGGCAAACCTACATCTGCCAG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTTCAAGGCCGTGGTCCTaGCCCTCTGACTCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFSRPWS*PSDSSS
Trigger: ACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGA...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CAA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACATGAAATCCCACAACTaGACGCTCTGCCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYMKSHN*TLCPAP
Trigger: TGGAGCTGGGCAGAGCGTCAAGTTGTGGGATTTCAT...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS-3UTR CAA 90 bp AGCAGGGAAGACCCTGGTGATTTCTTAGTGCCGTGGTGGCAAGTGTGCCAATACTGGCTGGAGATACTTTaGGTTGTCACAGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SREDPGDFLVPWWQVCQYWLEIL*VVTVVG
Trigger: CCCCACCACTGTGACAACCAAAAGTATCTCCAGCCA...GTATTGGCACACTTGCCACCACGGCACTAAGAAATCACCAGGGTCTTCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS GCA 90 bp GAGGACCTGCCCTTGATTTGTCTGTGCAGCAGCCTTTTGGAGATCTaGTTATGCACTGGAGTCTCGGCCACACTCTTAGTCAGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: EDLPLICLCSSLLEI*LCTGVSATLLVSSL
Trigger: CAAACTGCTGACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGGCAGGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp TGGCAAAAACCCAGGCGGCTGAGTACCTTGCCTCTTAGGAGTTCTTaGTGTCTTCGTTTCAAGAGAGGTACCTTCTCCTGCCTGGGTATG +
Preference number: 5 (lower is better)
Translates to: WQKPRRLSTLPLRSS*CLRFKRGTFSCLGM
Trigger: CATACCCAGGCAGGAGAAGGTACCTCTCTTGAAACGAAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGACTGTACTTTCATTTATaGAAGGGCATTGCAGACACA +
Preference number: 5 (lower is better)
Translates to: LPSTSPPATSPTRGRARRLYFHL*KGIADT
Trigger: TGTGTCTGCAATGCCCTTCAATAAATGAAAGTACAG...TCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TGCCATCCACCTCTCCTCCTGCAACTTCCCCAACAAGGGGCAGGGCCAGGAGATAGATTTCTTCGAACTTaGGTCACTTCTTGCACTGTA +
Preference number: 5 (lower is better)
Translates to: CHPPLLLQLPQQGAGPGDRFLRT*VTSCTV
Trigger: TACAGTGCAAGAAGTGACCAAAGTTCGAAGAAATCT...ATCTCCTGGCCCTGCCCCTTGTTGGGGAAGTTGCAGGAGGAGAGGTGGATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CTGGTCCAGCGGGTCTGTGGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAAAGCAATTCCTGGTaGAAAAGATTTCTTCGAACT +
Preference number: 5 (lower is better)
Translates to: LVQRVCGALLWGTLGGNDESNSW*KRFLRT
Trigger: AGTTCGAAGAAATCTTTTCAACCAGGAATTGCTTTC...ATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCCACAGACCCGCTGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCAGGTCACAGATCCTTTaGGCTCCACGGTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: TGLNTFWRLRDSSESALTRSQIL*APRSAS
Trigger: AGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACCT...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AGATACTTTTGGTTGTCACAGTGGTGGGGGTGGAGGCCAGGGATGTTACTAAACGCTACGTGTTGGCTGTaGCATGTCTGCCCAGGACTT +
Preference number: 5 (lower is better)
Translates to: RYFWLSQWWGWRPGMLLNATCWL*HVCPGL
Trigger: AAGTCCTGGGCAGACATGCAACAGCCAACACGTAGC...GTTTAGTAACATCCCTGGCCTCCACCCCCACCACTGTGACAACCAAAAGTATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS GCA 90 bp TCAGCCTGCTTACCAACTGCTGAAATAACAGCCTTTGAGTTGCTGTaGTCTCCTCTGGACTTCCTAGCATCCAGCTGTCAGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SACLPTAEITAFELL*SPLDFLASSCQCPK
Trigger: CTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCACAGCAACTCAAAGGCTGTTATTTCAGCAGTTGGTAAGCAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGGGCACTCCTGTGGGGCACTCTTGGTGGAAACGATGAGCCAGGTGATGGTCTCGAAAGCAATTCCTGGTaGAAAAGATTTCTTCGAACT +
Preference number: 5 (lower is better)
Translates to: GALLWGTLGGNDEPGDGLESNSW*KRFLRT
Trigger: AGTTCGAAGAAATCTTTTCAACCAGGAATTGCTTTC...GAGACCATCACCTGGCTCATCGTTTCCACCAAGAGTGCCCCACAGGAGTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCTTCACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTTTAGTGATCTCTTaGAAGGGGAAAGCAATTCCT +
Preference number: 5 (lower is better)
Translates to: GFTVYKALPVSQQPSLTAALVIS*KGKAIP
Trigger: AGGAATTGCTTTCCCCTTCAAAGAGATCACTAAAGC...TGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp ACAGTTTACAAAGCGCTGCCTGTGTCGCAGCAGCCCAGCCTTACAGCAGCTCAACCAAAAAGAAGACTCTaGGGAGACCGAATACTTTGG +
Preference number: 5 (lower is better)
Translates to: TVYKALPVSQQPSLTAAQPKRRL*GDRILW
Trigger: CCAAAGTATTCGGTCTCCCAAGAGTCTTCTTTTTGG...TTGAGCTGCTGTAAGGCTGGGCTGCTGCGACACAGGCAGCGCTTTGTAAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGAGTATACAACGGAGTTaGTGGTGTATGAGAGATCCT +
Preference number: 5 (lower is better)
Translates to: QGTPGRAPFSICINEAEWSIQRS*WCMRDP
Trigger: AGGATCTCTCATACACCACAAACTCCGTTGTATACT...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCAGGCGGCTGAGTACCTaGCCTCTTAGGAGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: EHNRLEHFLETERQFRVSRRLST*PLRSSW
Trigger: CCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCT...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp ATTTGGGAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAAGAGAGCTCTCCTCCTaGCTGAGGGGCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: IWEHNRLEHFLETERQFRRELSS*LRGSAS
Trigger: AGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCTCTCT...TCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCGGTCAGCTTCTTCCTaGGCCAACAGGACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: EHNRLEHFLETERQFRVSRSASS*ANRTLF
Trigger: GAAGAGAGTCCTGTTGGCCAAGGAAGAAGCTGACCG...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CAAGAGAGGTACCTTCTCCTGCCTGGGTATGTCGTTTTTGAGGAGTaGTTTTTGAATCCAATGGTGAGTCATGGCCGGGTGAGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: QERYLLLPGYVVFEE*FLNPMVSHGRVRRS
Trigger: ACTCCTCCTCACCCGGCCATGACTCACCATTGGATTCAAAAATCACTCCTCAAAAACGACATACCCAGGCAGGAGAAGGTACCTCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp CAGGGTCCACATCAGCAACCAGGTGTAACTCTTCAGCAGTCAGCCTaGTTACCAACTGCTGAAATAACAGCCTTTGAGTTGCTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: QGPHQQPGVTLQQSA*LPTAEITAFELLCS
Trigger: AGAGCACAGCAACTCAAAGGCTGTTATTTCAGCAGTTGGTAAGCAGGCTGACTGCTGAAGAGTTACACCTGGTTGCTGATGTGGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 90 bp AAGTCACCAATGCCATGGTGTTCGGCTTCACTGAGGAGAGTGACATaGTCTGTGTCACTTGTAATGAGCAGAGGAGAGGATGCATGCCAA +
Preference number: 5 (lower is better)
Translates to: KSPMPWCSASLRRVT*SVSLVMSRGEDACQ
Trigger: TTGGCATGCATCCTCTCCTCTGCTCATTACAAGTGACACAGAGCATGTCACTCTCCTCAGTGAAGCCGAACACCATGGCATTGGTGACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CAAGGGACCCCAGGGAGGGCGCCTTTCTCCATTTGCATAAATGAGGCAGAGTGGCTTTTTGCTGTCTTCTaGATGAGCTATAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: QGTPGRAPFSICINEAEWLFAVF*MSYSGF
Trigger: GAATCCACTATAGCTCATCAAGAAGACAGCAAAAAG...CCACTCTGCCTCATTTATGCAAATGGAGAAAGGCGCCCTCCCTGGGGTCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCATGGCAAAAGAGGCTaGGGACCAGGCATCCAACTT +
Preference number: 5 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAHGKRG*GPGIQL
Trigger: AAGTTGGATGCCTGGTCCCAAGCCTCTTTTGCCATG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAATGTTTGTGGCTATAAGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QASNFFMSTGSWLTP*SFGLSNVCGYKSSS
Trigger: GCTGGAGGACTTATAGCCACAAACATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS-3UTR CAA 90 bp ACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCTCACCTTGGAGAACATGTCGTaGAAATTCAGCCTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: TGLNTFWRLRDSSESALTLENMS*KFSLLG
Trigger: ACCAAGGAGGCTGAATTTCAACGACATGTTCTCCAA...GGTGAGGGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCCCCACTAGGTATCTTTaGGATTCCTTTCTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: NTTGLNTFWRLRDSSESAPTRYL*DSFLPS
Trigger: GCTGGGGAGAAAGGAATCCAAAAGATACCTAGTGGG...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCGAAAGAGTGGACTCTTaGCACACTTCGAGACTTCGG +
Preference number: 5 (lower is better)
Translates to: EHNRLEHFLETERQFRVSERVDS*HTSRLR
Trigger: CCGAAGTCTCGAAGTGTGCAAAGAGTCCACTCTTTC...GCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GCAGGGCCGCCTGACCTTAAAGCCTATTTTACTTGTGAAACTAAGACCCAGTTTTGGAGATACTTTTGGTaGTCACAGTGGTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGPPDLKAYFTCETKTQFWRYFW*SQWWGW
Trigger: CCACCCCCACCACTGTGACAACCAAAAGTATCTCCA...AAACTGGGTCTTAGTTTCACAAGTAAAATAGGCTTTAAGGTCAGGCGGCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561095.1
CDS TCA 90 bp TCACTTGACAGCTTTATTCCACTCCTGAGCAGCATTTCCCCAGCTTaGGCAAAATCCCAGCTGAAAGATTCAGATGGCAAGACAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SLDSFIPLLSSISPA*AKSQLKDSDGKTVP
Trigger: TGGCACTGTCTTGCCATCTGAATCTTTCAGCTGGGATTTTGCTCAAGCTGGGGAAATGCTGCTCAGGAGTGGAATAAAGCTGTCAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CTGGTTTCTGAAAATGTCTCTGATGCATGGCCAAGGGCTCTAGGGTaGCTGTCCATGTTTCTTGAATCTCTTTGCCTGCTTCAACAGGGA +
Preference number: 5 (lower is better)
Translates to: LVSENVSDAWPRALG*LSMFLESLCLLQQG
Trigger: TCCCTGTTGAAGCAGGCAAAGAGATTCAAGAAACATGGACAGTCACCCTAGAGCCCTTGGCCATGCATCAGAGACATTTTCAGAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS TCA 90 bp TTCGTTTCAAGAGAGGTACCTTCTCCTGCCTGGGTATGTCGTTTTTaGGGAGTGATTTTTGAATCCAATGGTGAGTCATGGCCGGGTGAG +
Preference number: 5 (lower is better)
Translates to: FVSREVPSPAWVCRF*GVIFESNGESWPGE
Trigger: CTCACCCGGCCATGACTCACCATTGGATTCAAAAATCACTCCTCAAAAACGACATACCCAGGCAGGAGAAGGTACCTCTCTTGAAACGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp TTCACTGAATGTGGCCAAGTACAGTTTGGCAAAAACCCAGGCGGCTaGGTACCTTGCCTCTTAGGAGTTCTTGGTGTCTTCGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: FTECGQVQFGKNPGG*VPCLLGVLGVFVSR
Trigger: TCTTGAAACGAAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTTGCCAAACTGTACTTGGCCACATTCAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CTTGGGACCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTaGCTCCTTGATCTTTTGGGCTCAGTAATGTTTGTGGCTATAAGT +
Preference number: 5 (lower is better)
Translates to: LGTRHPTSLCPQGPG*LLDLLGSVMFVAIS
Trigger: ACTTATAGCCACAAACATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGGTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CCA 90 bp TCACATTCAGCCTTGCGACATTCAACATCTTTAAGGAACGGCACATaGTATTCATCTTCTGTCTCACTGGAGTACGAGGGACCCCTCGTT +
Preference number: 5 (lower is better)
Translates to: SHSALRHSTSLRNGT*YSSSVSLEYEGPLV
Trigger: AACGAGGGGTCCCTCGTACTCCAGTGAGACAGAAGATGAATACCATGTGCCGTTCCTTAAAGATGTTGAATGTCGCAAGGCTGAATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CCTGTAGTAACCCAAATGACTCCATCAAATCGGAACTGGCACCACTaGTGTTACAGAAAGGAAACCACTTTTCCACAACAGCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: PVVTQMTPSNRNWHH*CYRKETTFPQQLDS
Trigger: GGAGTCCAGCTGTTGTGGAAAAGTGGTTTCCTTTCTGTAACATCAGTGGTGCCAGTTCCGATTTGATGGAGTCATTTGGGTTACTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CTGGTTTCTGAAAATGTCTCTGATGCATGGCCAAGGGCTCTAGGGTaGCTGTCCATGTTTCTTGAATCTCTTTGCCTTCAACAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LVSENVSDAWPRALG*LSMFLESLCLQQGE
Trigger: TTCTCCCTGTTGAAGGCAAAGAGATTCAAGAAACATGGACAGTCACCCTAGAGCCCTTGGCCATGCATCAGAGACATTTTCAGAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560985.5
CDS GCA 90 bp AATGCATTTTTCCTTCTCTTCTTGGCTGATCTGGTACGAAGTTCCTaGAGTTCATCAGATTCAGGGCTGCCTGACACTGATCTACGAGCA +
Preference number: 5 (lower is better)
Translates to: NAFFLLFLADLVRSS*SSSDSGLPDTDLRA
Trigger: TGCTCGTAGATCAGTGTCAGGCAGCCCTGAATCTGATGAACTGCAGGAACTTCGTACCAGATCAGCCAAGAAGAGAAGGAAAAATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp AAGTTGTCAAGTTTATCCTCTAGACCATCCACAGCTGACACAGAATaGCTTCTAGGCAACCCCCGCTTTAGTGATCTCTTTGAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: KLSSLSSRPSTADTE*LLGNPRFSDLFEGE
Trigger: TTCCCCTTCAAAGAGATCACTAAAGCGGGGGTTGCCTAGAAGCCATTCTGTGTCAGCTGTGGATGGTCTAGAGGATAAACTTGACAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp CTTGATTTGTCTGTGCAGCAGCCTTTTGGAGATCTGCTTATGCACTaGAGTCTCGGCCACACTCTTAGTCAGCAGTTTGTGATAACCTTT +
Preference number: 5 (lower is better)
Translates to: LDLSVQQPFGDLLMH*SLGHTLSQQFVITF
Trigger: AAAGGTTATCACAAACTGCTGACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGACAAATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACCAAAGTGCTGCTCGTaGGGAGAGACCACTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILPKCCS*GETTGP
Trigger: TGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGG...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CGGCTGAGACACAGAATAGAAGGAGGCAGAATGTGTCCTGCTAAATaGCAACTGCTTGATTCGAGGACTTCGTCTCAGACTTATTTCATC +
Preference number: 5 (lower is better)
Translates to: RLRHRIEGGRMCPAK*QLLDSRTSSQTYFI
Trigger: GATGAAATAAGTCTGAGACGAAGTCCTCGAATCAAGCAGTTGTCATTTAGCAGGACACATTCTGCCTCCTTCTATTCTGTGTCTCAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 90 bp ACGAGGCCTCATACTCAGGAGAATTGTAGAGCAAACGGTTTAAAGTaGCATCAGTTGGCAGCATTGAAATCCACGGAGAAAGATGAGGTT +
Preference number: 5 (lower is better)
Translates to: TRPHTQENCRANGLK*HQLAALKSTEKDEV
Trigger: AACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAACCGTTTGCTCTACAATTCTCCTGAGTATGAGGCCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCTTTTTGCTGTCTTCTaGATGAGCTATAGTGGATTC +
Preference number: 5 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFLFAVF*MSYSGF
Trigger: GAATCCACTATAGCTCATCAAGAAGACAGCAAAAAG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AACACAACAGGCTTGAACACTTTCTGGAGACTGAGAGACAGTTCAGAGTCAGCCAACTTTGGTCACTTCTaGCACTGTATCTTTCACTGG +
Preference number: 5 (lower is better)
Translates to: NTTGLNTFWRLRDSSESANFGHF*HCIFHW
Trigger: CCAGTGAAAGATACAGTGCAAGAAGTGACCAAAGTT...GGCTGACTCTGAACTGTCTCTCAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTTCAGAGGACCTGCCCTaGATTTGTCTGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLSEDLP*ICLCSS
Trigger: GCTGCTGCACAGACAAATCAAGGGCAGGTCCTCTGA...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CCAGGCATCCAACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTGATCTTTCTAAATGGACTCTTCTaGGAGACATCACATAAAGGA +
Preference number: 5 (lower is better)
Translates to: PGIQLLYVHRVLADSLIFLNGLF*ETSHKG
Trigger: TCCTTTATGTGATGTCTCCAAGAAGAGTCCATTTAG...AAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTTGGATGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp TTTAAAGTGGCATCAGTTGGCAGCATTGAAATCCACGGAGAAAGATaGGGTTCACTTGACAGCTTTATTCCACTCCTGAGCAGCATTTCC +
Preference number: 5 (lower is better)
Translates to: FKVASVGSIEIHGER*GSLDSFIPLLSSIS
Trigger: GGAAATGCTGCTCAGGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGTGCGAGTCAAAGAACTaGAAGGCCCAGTGGACCCTG +
Preference number: 5 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRCESKN*KAQWTL
Trigger: CAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCA...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGGGGCTGTTGGTGTGTTaGATTCTGAGGCGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRGLLVC*ILRRAH
Trigger: ATGGGCACGCCTCAGAATCAAACACACCAACAGCCC...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTAGGTCACAGATCCTTTaGGCTCCACGGTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLRSQIL*APRSAS
Trigger: AGAAGCTGACCGTGGAGCCAAAAGGATCTGTGACCT...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGGGAACACAACAGGCTaGAACACTTTCTGGAGACTG +
Preference number: 5 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLGNTTG*NTFWRL
Trigger: CAGTCTCCAGAAAGTGTTCAAGCCTGTTGTGTTCCC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp ACCCCCGCTTTAGTGATCTCTTTGAAGGGGAAAGCAATTCCTGGTTaGAAAGATTTCTTCGAACTTTGGTCACTTCTTGCACTGTATCTT +
Preference number: 5 (lower is better)
Translates to: TPALVISLKGKAIPG*KDFFELWSLLALYL
Trigger: AAGATACAGTGCAAGAAGTGACCAAAGTTCGAAGAAATCTTTTCAACCAGGAATTGCTTTCCCCTTCAAAGAGATCACTAAAGCGGGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGTTCTTAATTCGAAGTTaGGGAAGGCCAGAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRFLIRS*GRPEAC
Trigger: GCAAGCTTCTGGCCTTCCCAAACTTCGAATTAAGAA...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGAGGAACCCCATCTGTTaGAAATGGAGAGGGGGTACT +
Preference number: 5 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRRNPIC*KWRGGT
Trigger: AGTACCCCCTCTCCATTTCAAACAGATGGGGTTCCT...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 90 bp CACCTCCTCCACTACTTGTTCCATATCATCTGTACTTTCATTTATTaGAGGGCATTGCAGACACATCTCCAAACGAAGAAATACCTGAAG +
Preference number: 5 (lower is better)
Translates to: HLLHYLFHIICTFIY*RALQTHLQTKKYLK
Trigger: CTTCAGGTATTTCTTCGTTTGGAGATGTGTCTGCAATGCCCTTCAATAAATGAAAGTACAGATGATATGGAACAAGTAGTGGAGGAGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGAACTTTGGTCACTTCTaGCACTGTATCTTTCACTGG +
Preference number: 5 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRNFGHF*HCIFHW
Trigger: CCAGTGAAAGATACAGTGCAAGAAGTGACCAAAGTT...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTGGGAAGAAGTCACAGTaGAATTCCCTGGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLGKKSQ*NSLVFL
Trigger: CAAAAAGACCAGGGAATTCAACTGTGACTTCTTCCC...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp AAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTTACACAGGGAAGGGACTGTCCATGTTTCTaGAATCTCTTTGCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KCTECSVTRDDFTVTQGRDCPCF*NLFAFN
Trigger: GTTGAAGGCAAAGAGATTCAAGAAACATGGACAGTC...CCTTCCCTGTGTAACAGTAAAATCATCTCTAGTGACTGAGCACTCAGTACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560985.5
CDS CCA 90 bp TTCTGGAGTATACAACGGAGTTTGTGGTGTATGAGAGATCCTTCTTaGTGTAGTTTTAGAAAAGCTCAGAGATTTCTGGTGACTCTTCTT +
Preference number: 5 (lower is better)
Translates to: FWSIQRSLWCMRDPS*CSFRKAQRFLVTLL
Trigger: AAGAAGAGTCACCAGAAATCTCTGAGCTTTTCTAAAACTACACCAAGAAGGATCTCTCATACACCACAAACTCCGTTGTATACTCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACTTAAAGTGGCATCAGTaGGCAGCATTGAAATCCACG +
Preference number: 5 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNLKWHQ*AALKST
Trigger: CGTGGATTTCAATGCTGCCAACTGATGCCACTTTAA...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTATTGGAGAACATGTCGTaGAAATTCAGCCTCCTTGGT +
Preference number: 5 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILLENMS*KFSLLG
Trigger: ACCAAGGAGGCTGAATTTCAACGACATGTTCTCCAA...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACCTAAATGACAACTGCTaGATTCGAGGACTTCGTCTC +
Preference number: 5 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNLNDNC*IRGLRL
Trigger: GAGACGAAGTCCTCGAATCAAGCAGTTGTCATTTAG...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGTTCTTAATTCGAAGTTaGGGAAGGCCAGAAGCTTGC +
Preference number: 5 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRFLIRS*GRPEAC
Trigger: GCAAGCTTCTGGCCTTCCCAAACTTCGAATTAAGAA...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp TTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCCTTCACATTCAGCCTaGCGACATTCAACATCTTTA +
Preference number: 5 (lower is better)
Translates to: LEFDLQDNRRNQIWEHNRPSHSA*RHSTSL
Trigger: TAAAGATGTTGAATGTCGCAAGGCTGAATGTGAAGG...CCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp CACTTAGAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACTTTTTCCTTCTCTTCTaGGCTGATCTGGTACGAAGT +
Preference number: 5 (lower is better)
Translates to: HLEFDLQDNRRNQIWEHNFFLLF*ADLVRS
Trigger: ACTTCGTACCAGATCAGCCAAGAAGAGAAGGAAAAA...GTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTCTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GGCCCAACATTAAACAAAAATGTACTGAGTGCTCAGTCACTAGAGATGATTTTACTGTACTTTCATTTATaGAAGGGCATTGCAGACACA +
Preference number: 5 (lower is better)
Translates to: GPTLNKNVLSAQSLEMILLYFHL*KGIADT
Trigger: TGTGTCTGCAATGCCCTTCAATAAATGAAAGTACAG...TAAAATCATCTCTAGTGACTGAGCACTCAGTACATTTTTGTTTAATGTTGGGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS-3UTR CAA 90 bp GAGTTTGATTTACAAGACAATAGGAGGAATCAGATTTGGGAACACAACAGGCTTAATCCAAAGTGTTTCTaGAACGCTTTTTCATTCGAG +
Preference number: 5 (lower is better)
Translates to: EFDLQDNRRNQIWEHNRLNPKCF*NAFSFE
Trigger: CTCGAATGAAAAAGCGTTCAAGAAACACTTTGGATT...AAGCCTGTTGTGTTCCCAAATCTGATTCCTCCTATTGTCTTGTAAATCAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GCGTCTCCATCAGGGCGCCGTGCGTGTGGGTGGCCCTaGGCGCCGGGCCGGGCAGGTGGGCGCGATCCTCGA +
Preference number: 6 (lower is better)
Translates to: ASPSGRRACGWP*APGRAGGRDPR
Trigger: TCGAGGATCGCGCCCACCTGCCCGGCCCGGCGCCCAGGGCCACCCACACGCACGGCGCCCTGATGGAGACGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp GGACCCTGGCCAGGCCGAATCGGCAACTCAGATAGGTaGGGAGGCGCAGGGCGGCCCGCCGGACCCGGCTGT +
Preference number: 6 (lower is better)
Translates to: GPWPGRIGNSDR*GGAGRPAGPGC
Trigger: ACAGCCGGGTCCGGCGGGCCGCCCTGCGCCTCCTCACCTATCTGAGTTGCCGATTCGGCCTGGCCAGGGTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp AGGCGCTGGGCCTGGGCCTCGCACCCAGACACGAACTaGAGCAGCTCCCTCTGCGAGTGCGGACAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: RRWAWASHPDTN*SSSLCECGQGA
Trigger: GGCCCCCTGTCCGCACTCGCAGAGGGAGCTGCTGCAGTTCGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp GCGCCGCCCGCGGTGTCCAGCAGCAGCATTACTTTGTaGCAGCATGCCATATCGGCCGTGCCGCCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: APPAVSSSSITL*QHAISAVPPPR
Trigger: CCGGGGCGGCGGCACGGCCGATATGGCATGCTGTCACAAAGTAATGCTGCTGCTGGACACCGCGGGCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS TCA 72 bp ACGGCCGGCTCCGCGCCCCCTGCGAGTCAAAGAACTTaGAGGCCCAGTGGACCCTGGCCAGGCCGAATCGGC +
Preference number: 6 (lower is better)
Translates to: TAGSAPPASQRT*RPSGPWPGRIG
Trigger: GCCGATTCGGCCTGGCCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp GCCTCGCACCCAGACACGAACTGCAGCAGCTCCCTCTaGGAGTGCGGACAGGGGGCCAGGAGGAAGACGGCG +
Preference number: 6 (lower is better)
Translates to: ASHPDTNCSSSL*ECGQGARRKTA
Trigger: CGCCGTCTTCCTCCTGGCCCCCTGTCCGCACTCGCAGAGGGAGCTGCTGCAGTTCGTGTCTGGGTGCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp GACGGCCGGCTCCGCGCCCCCTGCGAGTCAAAGAACTaGAAGGCCCAGTGGACCCTGGCCAGGCCGAATCGG +
Preference number: 6 (lower is better)
Translates to: DGRLRAPCESKN*KAQWTLARPNR
Trigger: CCGATTCGGCCTGGCCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp GACACGCGGGACGGCCGGCTCCGCGCCCCCTGCGAGTCAAAGAACTaGAAGGCCCAGTGGACCCTGGCCAGGCCGAATCGGCAACTCAGA +
Preference number: 6 (lower is better)
Translates to: DTRDGRLRAPCESKN*KAQWTLARPNRQLR
Trigger: TCTGAGTTGCCGATTCGGCCTGGCCAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGTCCCGCGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp TCCCGCTGCTCCGCAGGATCGGCTTCGTGGGCGACGTaGTCTCGGGCCGGTCCCACTGGTAGTCTAGCAGCG +
Preference number: 6 (lower is better)
Translates to: SRCSAGSASWAT*SRAGPTGSLAA
Trigger: CGCTGCTAGACTACCAGTGGGACCGGCCCGAGATCACGTCGCCCACGAAGCCGATCCTGCGGAGCAGCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp TTCTCCATCACCTGCTTAGGGGTGGGCGGCAGGCGCTaGGCCTGGGCCTCGCACCCAGACACGAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: FSITCLGVGGRR*AWASHPDTNCS
Trigger: GCTGCAGTTCGTGTCTGGGTGCGAGGCCCAGGCCCAGCGCCTGCCGCCCACCCCTAAGCAGGTGATGGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp AAGTCAGACACGCGGGACGGCCGGCTCCGCGCCCCCTaGGAGTCAAAGAACTTGAAGGCCCAGTGGACCCTG +
Preference number: 6 (lower is better)
Translates to: KSDTRDGRLRAP*ESKNLKAQWTL
Trigger: CAGGGTCCACTGGGCCTTCAAGTTCTTTGACTCGCAGGGGGCGCGGAGCCGGCCGTCCCGCGTGTCTGACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GGGCACTGGCAGAGAGGCAGCTCCGCACGGCACAGCTaGGAGGTGGGGTGGAGCCGGAAACAAACACCTCTT +
Preference number: 6 (lower is better)
Translates to: GHWQRGSSARHS*EVGWSRKQTPL
Trigger: AAGAGGTGTTTGTTTCCGGCTCCACCCCACCTCCCAGCTGTGCCGTGCGGAGCTGCCTCTCTGCCAGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS GCA 72 bp GCCGAAGCCTGGCACTGTCTCCCATCTGTGGTACAGTaGACGTCACGGGAAGGCATCAGAGGAGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: AEAWHCLPSVVQ*TSREGIRGEPG
Trigger: GCCTGGCTCTCCTCTGATGCCTTCCCGTGACGTGCACTGTACCACAGATGGGAGACAGTGCCAGGCTTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GCTGGACTCCAGGGAGTGGTGTGGCCAAGCTCCTGCTaGGCCCACTCTGGAACAGGAGAAGCAGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: AGLQGVVWPSSC*AHSGTGEAAEA
Trigger: TGCTTCTGCTGCTTCTCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp GCTGTGCCAACCCCAGGAGTAGCGGAGGCATCAGGCTaGCACTCCACGATGCTCCTTCTGGGATCAGAGGTC +
Preference number: 6 (lower is better)
Translates to: AVPTPGVAEASG*HSTMLLLGSEV
Trigger: GACCTCTGATCCCAGAAGGAGCATCGTGGAGTGTCAGCCTGATGCCTCCGCTACTCCTGGGGTTGGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GGGTCTCTGATGGGAGTGAGACACTCTCTCCTGGGCTaGGCAGTCGATGAAGTTGGAGGGGCTGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: GSLMGVRHSLLG*AVDEVGGAGQE
Trigger: CTCCTGTCCAGCCCCTCCAACTTCATCGACTGCCCAGCCCAGGAGAGAGTGTCTCACTCCCATCAGAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp TCCTCGGCCTTAGGCATGCTGTTCCTGGGAGGCGACTaGTCTGGGAGCTGGCACACTCCCTCGAGCTCAAAA +
Preference number: 6 (lower is better)
Translates to: SSALGMLFLGGD*SGSWHTPSSSK
Trigger: TTTTGAGCTCGAGGGAGTGTGCCAGCTCCCAGACCAGTCGCCTCCCAGGAACAGCATGCCTAAGGCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CAA 72 bp GGCGTCCTGTGGATGCTGAGTTCAAGGCCGTGGTCCTaGCCCTCTGACTCAAGCAGTGACAGGCTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: GVLWMLSSRPWS*PSDSSSDRLPG
Trigger: TCCTGGGAGCCTGTCACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CAA 90 bp CTGGGCTGGTTCCTCTGCCCGAGCAGCTCTGAGGACATGGGGCTGTaGGTGTGTTTGATTCTGAGGCGTGCCCATGAAGGCTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LGWFLCPSSSEDMGL*VCLILRRAHEGCCS
Trigger: AGAGCAGCAGCCTTCATGGGCACGCCTCAGAATCAAACACACCAACAGCCCCATGTCCTCAGAGCTGCTCGGGCAGAGGAACCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp CTGGACTTCCTAGCATCCAGCTGTCAGTGCCCAAAGTaGTGCTCGTTGGGAGAGACCACTGGGCCACTGAGC +
Preference number: 6 (lower is better)
Translates to: LDFLASSCQCPK*CSLGETTGPLS
Trigger: GCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp CACTTTTCCACAACAGCTGGACTCCAGGGAGTGGTGTaGCCAAGCTCCTGCTGGGCCCACTCTGGAACAGGA +
Preference number: 6 (lower is better)
Translates to: HFSTTAGLQGVV*PSSCWAHSGTG
Trigger: TCCTGTTCCAGAGTGGGCCCAGCAGGAGCTTGGCCACACCACTCCCTGGAGTCCAGCTGTTGTGGAAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GGGTGGAGCCGGAAACAAACACCTCTTCGTCTCCCGTaGAGGGTAGCTGCCATGCACTCCAACTTGGAGACC +
Preference number: 6 (lower is better)
Translates to: GWSRKQTPLRLP*RVAAMHSNLET
Trigger: GGTCTCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGGTGTTTGTTTCCGGCTCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CAA 72 bp GGGAGGAAGCTCTCTTCTCCCAGAGAGCTCTCCTCCTaGCTGAGGGGCTCAGCCTCTAATGAAGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GRKLSSPRELSS*LRGSASNEELG
Trigger: CCCCAGCTCTTCATTAGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCTCTCTGGGAGAAGAGAGCTTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp TTCCTCTGCCCGAGCAGCTCTGAGGACATGGGGCTGTTGGTGTGTTaGATTCTGAGGCGTGCCCATGAAGGCTGCTGCTCTCGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: FLCPSSSEDMGLLVC*ILRRAHEGCCSRRC
Trigger: ACACCTCCGAGAGCAGCAGCCTTCATGGGCACGCCTCAGAATCAAACACACCAACAGCCCCATGTCCTCAGAGCTGCTCGGGCAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp TCCAAGATGGGCGTCCTGTGGATGCTGAGTTCAAGGCCGTGGTCCTaGCCCTCTGACTCAAGCAGTGACAGGCTCCCAGGAAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: SKMGVLWMLSSRPWS*PSDSSSDRLPGRSA
Trigger: TGCAGACCTTCCTGGGAGCCTGTCACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCCCATCTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS GCA 72 bp GACTTCCTAGCATCCAGCTGTCAGTGCCCAAAGTGCTaGTCGTTGGGAGAGACCACTGGGCCACTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: DFLASSCQCPKC*SLGETTGPLSL
Trigger: AAGGCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp TGCTCTCCTCTGGACTTCCTAGCATCCAGCTGTCAGTaGCCAAAGTGCTGCTCGTTGGGAGAGACCACTGGG +
Preference number: 6 (lower is better)
Translates to: CSPLDFLASSCQ*PKCCSLGETTG
Trigger: CCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp CTAGTTGTGCCGAAGCCTGGCACTGTCTCCCATCTGTaGTACAGTGCACGTCACGGGAAGGCATCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: LVVPKPGTVSHL*YSARHGKASEE
Trigger: CTCCTCTGATGCCTTCCCGTGACGTGCACTGTACCACAGATGGGAGACAGTGCCAGGCTTCGGCACAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp AAGATGGGCGTCCTGTGGATGCTGAGTTCAAGGCCGTaGTCCTTGCCCTCTGACTCAAGCAGTGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: KMGVLWMLSSRP*SLPSDSSSDRL
Trigger: GAGCCTGTCACTGCTTGAGTCAGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCCCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CCA 72 bp CCCTCGAGCTCAAAATCCTCCAAGATGGGCGTCCTGTaGATGCTGAGTTCAAGGCCGTGGTCCTTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: PSSSKSSKMGVL*MLSSRPWSLPS
Trigger: AGAGGGCAAGGACCACGGCCTTGAACTCAGCATCCACAGGACGCCCATCTTGGAGGATTTTGAGCTCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CAA 72 bp CCGAGCAGCTCTGAGGACATGGGGCTGTTGGTGTGTTaGATTCTGAGGCGTGCCCATGAAGGCTGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PSSSEDMGLLVC*ILRRAHEGCCS
Trigger: AGAGCAGCAGCCTTCATGGGCACGCCTCAGAATCAAACACACCAACAGCCCCATGTCCTCAGAGCTGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp TTCCTCTGCCCGAGCAGCTCTGAGGACATGGGGCTGTaGGTGTGTTTGATTCTGAGGCGTGCCCATGAAGGC +
Preference number: 6 (lower is better)
Translates to: FLCPSSSEDMGL*VCLILRRAHEG
Trigger: GCCTTCATGGGCACGCCTCAGAATCAAACACACCAACAGCCCCATGTCCTCAGAGCTGCTCGGGCAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp TGTGGGCTGGCAGAGTCTGTGGAATGCCAAGCTGATGCTGGCAGGTaGTCTAGTTGTGCCGAAGCCTGGCACTGTCTCCCATCTGTGGTA +
Preference number: 6 (lower is better)
Translates to: CGLAESVECQADAGR*SSCAEAWHCLPSVV
Trigger: TACCACAGATGGGAGACAGTGCCAGGCTTCGGCACAACTAGACAACCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGCCAGCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp CTGAGAGCAGGGAGGAAGCTCTCTTCTCCCAGAGAGCTCTCCTCCTaGCTGAGGGGCTCAGCCTCTAATGAAGAGCTGGGGTCTATCTTC +
Preference number: 6 (lower is better)
Translates to: LRAGRKLSSPRELSS*LRGSASNEELGSIF
Trigger: GAAGATAGACCCCAGCTCTTCATTAGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCTCTCTGGGAGAAGAGAGCTTCCTCCCTGCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp GGAAGCTCTCTTCTCCCAGAGAGCTCTCCTCCTTGCTaGGGGGCTCAGCCTCTAATGAAGAGCTGGGGTCTA +
Preference number: 6 (lower is better)
Translates to: GSSLLPESSPPC*GAQPLMKSWGL
Trigger: TAGACCCCAGCTCTTCATTAGAGGCTGAGCCCCTCAGCAAGGAGGAGAGCTCTCTGGGAGAAGAGAGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GCTGATGCTGGCAGGTTGTCTAGTTGTGCCGAAGCCTaGCACTGTCTCCCATCTGTGGTACAGTGCACGTCA +
Preference number: 6 (lower is better)
Translates to: ADAGRLSSCAEA*HCLPSVVQCTS
Trigger: TGACGTGCACTGTACCACAGATGGGAGACAGTGCCAGGCTTCGGCACAACTAGACAACCTGCCAGCATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp GCAGAGTCTGTGGAATGCCAAGCTGATGCTGGCAGGTaGTCTAGTTGTGCCGAAGCCTGGCACTGTCTCCCA +
Preference number: 6 (lower is better)
Translates to: AESVECQADAGR*SSCAEAWHCLP
Trigger: TGGGAGACAGTGCCAGGCTTCGGCACAACTAGACAACCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp CTAGCATCCAGCTGTCAGTGCCCAAAGTGCTGCTCGTaGGGAGAGACCACTGGGCCACTGAGCCTTTTAGAA +
Preference number: 6 (lower is better)
Translates to: LASSCQCPKCCS*GETTGPLSLLE
Trigger: TTCTAAAAGGCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGACAGCTGGATGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp TTGGTGTGTTTGATTCTGAGGCGTGCCCATGAAGGCTaGTGCTCTCGGAGGTGTTCTGAGAGGGTCTCTGAT +
Preference number: 6 (lower is better)
Translates to: LVCLILRRAHEG*CSRRCSERVSD
Trigger: ATCAGAGACCCTCTCAGAACACCTCCGAGAGCAGCAGCCTTCATGGGCACGCCTCAGAATCAAACACACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp GAAACAAACACCTCTTCGTCTCCCGTGGAGGGTAGCTaGCATGCACTCCAACTTGGAGACCCCTCTTTACTC +
Preference number: 6 (lower is better)
Translates to: ETNTSSSPVEGS*HALQLGDPSLL
Trigger: GAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGCAGCTACCCTCCACGGGAGACGAAGAGGTGTTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CCA 72 bp CCCAGGCGGCTGAGTACCTTGCCTCTTAGGAGTTCTTaGTGTCTTCGTTTCAAGAGAGGTACCTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PRRLSTLPLRSS*CLRFKRGTFSC
Trigger: GCAGGAGAAGGTACCTCTCTTGAAACGAAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp CGGAGGCATCAGGCTGACACTCCACGATGCTCCTTCTaGGATCAGAGGTCTTTCTACACCGTTTCCCAACTT +
Preference number: 6 (lower is better)
Translates to: RRHQADTPRCSF*DQRSFYTVSQL
Trigger: AAGTTGGGAAACGGTGTAGAAAGACCTCTGATCCCAGAAGGAGCATCGTGGAGTGTCAGCCTGATGCCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GCTCAACCTCATAGGTCTGTGGGCTGGCAGAGTCTGTaGAATGCCAAGCTGATGCTGGCAGGTTGTCTAGTT +
Preference number: 6 (lower is better)
Translates to: AQPHRSVGWQSL*NAKLMLAGCLV
Trigger: AACTAGACAACCTGCCAGCATCAGCTTGGCATTCCACAGACTCTGCCAGCCCACAGACCTATGAGGTTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp GAGGACCTGCCCTTGATTTGTCTGTGCAGCAGCCTTTaGGAGATCTGCTTATGCACTGGAGTCTCGGCCACA +
Preference number: 6 (lower is better)
Translates to: EDLPLICLCSSL*EICLCTGVSAT
Trigger: TGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGGCAGGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp CCAGGATCAGAGGACCTGCCCTTGATTTGTCTGTGCAGCAGCCTTTaGGAGATCTGCTTATGCACTGGAGTCTCGGCCACACTCTTAGTC +
Preference number: 6 (lower is better)
Translates to: PGSEDLPLICLCSSL*EICLCTGVSATLLV
Trigger: GACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGGCAGGTCCTCTGATCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp GGCTGGACAGGAGGGGCTTTCTGGACTGGAATTCACTaGATGTGGCCAAGTACAGTTTGGCAAAAACCCAGG +
Preference number: 6 (lower is better)
Translates to: GWTGGAFWTGIH*MWPSTVWQKPR
Trigger: CCTGGGTTTTTGCCAAACTGTACTTGGCCACATTCAGTGAATTCCAGTCCAGAAAGCCCCTCCTGTCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp GGACCAGGATCAGAGGACCTGCCCTTGATTTGTCTGTaGAGCAGCCTTTTGGAGATCTGCTTATGCACTGGA +
Preference number: 6 (lower is better)
Translates to: GPGSEDLPLICL*SSLLEICLCTG
Trigger: TCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGGCAGGTCCTCTGATCCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp CAGCAGTCAGCCTGCTTACCAACTGCTGAAATAACAGCCTTTGAGTaGCTGTGCTCTCCTCTGGACTTCCTAGCATCCAGCTGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: QQSACLPTAEITAFE*LCSPLDFLASSCQC
Trigger: GCACTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCACAGCAACTCAAAGGCTGTTATTTCAGCAGTTGGTAAGCAGGCTGACTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp GCTGGGGTCTATCTTCTTAATTCGAAGTTTGGGAAGGCCAGAAGCTaGCATCTCCAGCTCAACCTCATAGGTCTGTGGGCTGGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: AGVYLLNSKFGKARS*HLQLNLIGLWAGRV
Trigger: GACTCTGCCAGCCCACAGACCTATGAGGTTGAGCTGGAGATGCAAGCTTCTGGCCTTCCCAAACTTCGAATTAAGAAGATAGACCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp TGTGGCCAAGTACAGTTTGGCAAAAACCCAGGCGGCTaGGTACCTTGCCTCTTAGGAGTTCTTGGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: CGQVQFGKNPGG*VPCLLGVLGVF
Trigger: GAAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTTGCCAAACTGTACTTGGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp CCCTTGATTTGTCTGTGCAGCAGCCTTTTGGAGATCTaGTTATGCACTGGAGTCTCGGCCACACTCTTAGTC +
Preference number: 6 (lower is better)
Translates to: PLICLCSSLLEI*LCTGVSATLLV
Trigger: GACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGACAAATCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp TGGTGGAGCAGTTCACAAACAGTCCAGTATCCAAGGTaGTCTGGGGATTCCCACAACTTAGACCATTCGGTG +
Preference number: 6 (lower is better)
Translates to: WWSSSQTVQYPR*SGDSHNLDHSV
Trigger: CACCGAATGGTCTAAGTTGTGGGAATCCCCAGACCACCTTGGATACTGGACTGTTTGTGAACTGCTCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp TCAGTGCCCAAAGTGCTGCTCGTTGGGAGAGACCACTaGGCCACTGAGCCTTTTAGAAAAATTCTGACTGGT +
Preference number: 6 (lower is better)
Translates to: SVPKVLLVGRDH*ATEPFRKILTG
Trigger: ACCAGTCAGAATTTTTCTAAAAGGCTCAGTGGCCCAGTGGTCTCTCCCAACGAGCAGCACTTTGGGCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp TCTGTGCAGCAGCCTTTTGGAGATCTGCTTATGCACTaGAGTCTCGGCCACACTCTTAGTCAGCAGTTTGTG +
Preference number: 6 (lower is better)
Translates to: SVQQPFGDLLMH*SLGHTLSQQFV
Trigger: CACAAACTGCTGACTAAGAGTGTGGCCGAGACTCCAGTGCATAAGCAGATCTCCAAAAGGCTGCTGCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp GCCTGCTTACCAACTGCTGAAATAACAGCCTTTGAGTaGCTGTGCTCTCCTCTGGACTTCCTAGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: ACLPTAEITAFE*LCSPLDFLASS
Trigger: GCTGGATGCTAGGAAGTCCAGAGGAGAGCACAGCAACTCAAAGGCTGTTATTTCAGCAGTTGGTAAGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp ATGTGGCCAAGTACAGTTTGGCAAAAACCCAGGCGGCTGAGTACCTaGCCTCTTAGGAGTTCTTGGTGTCTTCGTTTCAAGAGAGGTACC +
Preference number: 6 (lower is better)
Translates to: MWPSTVWQKPRRLST*PLRSSWCLRFKRGT
Trigger: GGTACCTCTCTTGAAACGAAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTTGCCAAACTGTACTTGGCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp ATGCCATGGTGTTCGGCTTCACTGAGGAGAGTGACATaGTCTGTGTCACTTGTAATGAGCAGAGGAGAGGAT +
Preference number: 6 (lower is better)
Translates to: MPWCSASLRRVT*SVSLVMSRGED
Trigger: ATCCTCTCCTCTGCTCATTACAAGTGACACAGAGCATGTCACTCTCCTCAGTGAAGCCGAACACCATGGCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GAGCAGTTCACAAACAGTCCAGTATCCAAGGTGGTCTaGGGATTCCCACAACTTAGACCATTCGGTGGTATC +
Preference number: 6 (lower is better)
Translates to: EQFTNSPVSKVV*GFPQLRPFGGI
Trigger: GATACCACCGAATGGTCTAAGTTGTGGGAATCCCCAGACCACCTTGGATACTGGACTGTTTGTGAACTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp TATGTCTGGAGTTGTCTTCCCACTGTGCTTGGGGGATaGTGTCCAAGGAACCCCATCTGTTTGAAATGGAGA +
Preference number: 6 (lower is better)
Translates to: YVWSCLPTVLGG*CPRNPICLKWR
Trigger: TCTCCATTTCAAACAGATGGGGTTCCTTGGACACCATCCCCCAAGCACAGTGGGAAGACAACTCCAGACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp TACCTTCTCCTGCCTGGGTATGTCGTTTTTGAGGAGTaGTTTTTGAATCCAATGGTGAGTCATGGCCGGGTG +
Preference number: 6 (lower is better)
Translates to: YLLLPGYVVFEE*FLNPMVSHGRV
Trigger: CACCCGGCCATGACTCACCATTGGATTCAAAAATCACTCCTCAAAAACGACATACCCAGGCAGGAGAAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp TTACCAACTGCTGAAATAACAGCCTTTGAGTTGCTGTaGTCTCCTCTGGACTTCCTAGCATCCAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: LPTAEITAFELL*SPLDFLASSCQ
Trigger: CTGACAGCTGGATGCTAGGAAGTCCAGAGGAGAGCACAGCAACTCAAAGGCTGTTATTTCAGCAGTTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp CTGCTAGGTACGCTGAATCCTCAGTTAAACACACCATaGGCAGCAAATCTGTCACCTCCTCCACTACTTGTT +
Preference number: 6 (lower is better)
Translates to: LLGTLNPQLNTP*AANLSPPPLLV
Trigger: AACAAGTAGTGGAGGAGGTGACAGATTTGCTGCGCATGGTGTGTTTAACTGAGGATTCAGCGTACCTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp TTCCTTCTCTTCTTGGCTGATCTGGTACGAAGTTCCTaGAGTTCATCAGATTCAGGGCTGCCTGACACTGAT +
Preference number: 6 (lower is better)
Translates to: FLLFLADLVRSS*SSSDSGLPDTD
Trigger: ATCAGTGTCAGGCAGCCCTGAATCTGATGAACTGCAGGAACTTCGTACCAGATCAGCCAAGAAGAGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp AGTACAGTTTGGCAAAAACCCAGGCGGCTGAGTACCTaGCCTCTTAGGAGTTCTTGGTGTCTTCGTTTCAAG +
Preference number: 6 (lower is better)
Translates to: STVWQKPRRLST*PLRSSWCLRFK
Trigger: CTTGAAACGAAGACACCAAGAACTCCTAAGAGGCAAGGTACTCAGCCGCCTGGGTTTTTGCCAAACTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp CCGGACTGCCATCTGGATGTAACTTCTGGGCCTTCACATTCAGCCTaGCGACATTCAACATCTTTAAGGAACGGCACATGGTATTCATCT +
Preference number: 6 (lower is better)
Translates to: PDCHLDVTSGPSHSA*RHSTSLRNGTWYSS
Trigger: AGATGAATACCATGTGCCGTTCCTTAAAGATGTTGAATGTCGCAAGGCTGAATGTGAAGGCCCAGAAGTTACATCCAGATGGCAGTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp GCATCAGTTGGCAGCATTGAAATCCACGGAGAAAGATaGGGTTCACTTGACAGCTTTATTCCACTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: ASVGSIEIHGER*GSLDSFIPLLS
Trigger: GCTCAGGAGTGGAATAAAGCTGTCAAGTGAACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp ATGGCCAAGGGCTCTAGGGTGACTGTCCATGTTTCTTaGATCTCTTTGCCTGCTTCAACAGGGAGAAATAAC +
Preference number: 6 (lower is better)
Translates to: MAKGSRVTVHVS*ISLPASTGRNN
Trigger: GTTATTTCTCCCTGTTGAAGCAGGCAAAGAGATTCAAGAAACATGGACAGTCACCCTAGAGCCCTTGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268138.12
CDS TCA 72 bp ATCATGAGTCTGATTCAATATACTATCCACAACATCTaGGAAAAGGGAAGCTGTGTCCCGGGGGCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: IMSLIQYTIHNI*EKGSCVPGAVS
Trigger: GCTGACAGCCCCCGGGACACAGCTTCCCTTTTCTCAGATGTTGTGGATAGTATATTGAATCAGACTCATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS GCA 72 bp CATCAGCAACCAGGTGTAACTCTTCAGCAGTCAGCCTaGTTACCAACTGCTGAAATAACAGCCTTTGAGTTG +
Preference number: 6 (lower is better)
Translates to: HQQPGVTLQQSA*LPTAEITAFEL
Trigger: CAACTCAAAGGCTGTTATTTCAGCAGTTGGTAAGCAGGCTGACTGCTGAAGAGTTACACCTGGTTGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp GCCTTGCGACATTCAACATCTTTAAGGAACGGCACATaGTATTCATCTTCTGTCTCACTGGAGTACGAGGGA +
Preference number: 6 (lower is better)
Translates to: ALRHSTSLRNGT*YSSSVSLEYEG
Trigger: TCCCTCGTACTCCAGTGAGACAGAAGATGAATACCATGTGCCGTTCCTTAAAGATGTTGAATGTCGCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp AGTTTATCCTCTAGACCATCCACAGCTGACACAGAATaGCTTCTAGGCAACCCCCGCTTTAGTGATCTCTTT +
Preference number: 6 (lower is better)
Translates to: SLSSRPSTADTE*LLGNPRFSDLF
Trigger: AAAGAGATCACTAAAGCGGGGGTTGCCTAGAAGCCATTCTGTGTCAGCTGTGGATGGTCTAGAGGATAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp CATCTGGATGTAACTTCTGGGCCTTCACATTCAGCCTaGCGACATTCAACATCTTTAAGGAACGGCACATGG +
Preference number: 6 (lower is better)
Translates to: HLDVTSGPSHSA*RHSTSLRNGTW
Trigger: CCATGTGCCGTTCCTTAAAGATGTTGAATGTCGCAAGGCTGAATGTGAAGGCCCAGAAGTTACATCCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp TATCTTCTTAATTCGAAGTTTGGGAAGGCCAGAAGCTaGCATCTCCAGCTCAACCTCATAGGTCTGTGGGCT +
Preference number: 6 (lower is better)
Translates to: YLLNSKFGKARS*HLQLNLIGLWA
Trigger: AGCCCACAGACCTATGAGGTTGAGCTGGAGATGCAAGCTTCTGGCCTTCCCAAACTTCGAATTAAGAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp AATGAAGAGCTGGGGTCTATCTTCTTAATTCGAAGTTaGGGAAGGCCAGAAGCTTGCATCTCCAGCTCAACC +
Preference number: 6 (lower is better)
Translates to: NEELGSIFLIRS*GRPEACISSST
Trigger: GGTTGAGCTGGAGATGCAAGCTTCTGGCCTTCCCAAACTTCGAATTAAGAAGATAGACCCCAGCTCTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp CACAGAATAGAAGGAGGCAGAATGTGTCCTGCTAAATaGCAACTGCTTGATTCGAGGACTTCGTCTCAGACT +
Preference number: 6 (lower is better)
Translates to: HRIEGGRMCPAK*QLLDSRTSSQT
Trigger: AGTCTGAGACGAAGTCCTCGAATCAAGCAGTTGTCATTTAGCAGGACACATTCTGCCTCCTTCTATTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp AGAGAGGTACCTTCTCCTGCCTGGGTATGTCGTTTTTaGGGAGTGATTTTTGAATCCAATGGTGAGTCATGG +
Preference number: 6 (lower is better)
Translates to: REVPSPAWVCRF*GVIFESNGESW
Trigger: CCATGACTCACCATTGGATTCAAAAATCACTCCTCAAAAACGACATACCCAGGCAGGAGAAGGTACCTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp ACTGATAAGACGTTACTTTTCAAGTCACCAATGCCATaGTGTTCGGCTTCACTGAGGAGAGTGACATGCTCT +
Preference number: 6 (lower is better)
Translates to: TDKTLLFKSPMP*CSASLRRVTCS
Trigger: AGAGCATGTCACTCTCCTCAGTGAAGCCGAACACCATGGCATTGGTGACTTGAAAAGTAACGTCTTATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp GGTAAGCTGCAGGTACCTCCGAATCCAAAGTGTTTCTaGAACGCTTTTTCATTCGAGCTGAACCCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: GKLQVPPNPKCF*NAFSFELNPFL
Trigger: CAGAAAAGGGTTCAGCTCGAATGAAAAAGCGTTCAAGAAACACTTTGGATTCGGAGGTACCTGCAGCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp ACCCAAATGACTCCATCAAATCGGAACTGGCACCACTaGTGTTACAGAAAGGAAACCACTTTTCCACAACAG +
Preference number: 6 (lower is better)
Translates to: TQMTPSNRNWHH*CYRKETTFPQQ
Trigger: CTGTTGTGGAAAAGTGGTTTCCTTTCTGTAACATCAGTGGTGCCAGTTCCGATTTGATGGAGTCATTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp AACTTCTTTATGTCCACAGGGTCCTGGCTGACTCCTTaGTCTTTTGGGCTCAGTAATGTTTGTGGCTATAAG +
Preference number: 6 (lower is better)
Translates to: NFFMSTGSWLTP*SFGLSNVCGYK
Trigger: CTTATAGCCACAAACATTACTGAGCCCAAAAGATCAAGGAGTCAGCCAGGACCCTGTGGACATAAAGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268138.12
ENST00000560985.5
ENST00000561095.1
CDS CAA 72 bp AGAGCAAACGGTTTAAAGTGGCATCAGTTGGCAGCATaGAAATCCACGGAGAAAGATGAGGTTCACTTGACA +
Preference number: 6 (lower is better)
Translates to: RANGLKWHQLAA*KSTEKDEVHLT
Trigger: TGTCAAGTGAACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAACCGTTTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp CATACTCAGGAGAATTGTAGAGCAAACGGTTTAAAGTGGCATCAGTaGGCAGCATTGAAATCCACGGAGAAAGATGAGGTTCACTTGACA +
Preference number: 6 (lower is better)
Translates to: HTQENCRANGLKWHQ*AALKSTEKDEVHLT
Trigger: TGTCAAGTGAACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAACCGTTTGCTCTACAATTCTCCTGAGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp CATACTCAGGAGAATTGTAGAGCAAACGGTTTAAAGTaGCATCAGTTGGCAGCATTGAAATCCACGGAGAAA +
Preference number: 6 (lower is better)
Translates to: HTQENCRANGLK*HQLAALKSTEK
Trigger: TTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAACCGTTTGCTCTACAATTCTCCTGAGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp CTTCTGCAGCCTTTCTGGAGTATACAACGGAGTTTGTaGTGTATGAGAGATCCTTCTTGGTGTAGTTTTAGA +
Preference number: 6 (lower is better)
Translates to: LLQPFWSIQRSL*CMRDPSWCSFR
Trigger: TCTAAAACTACACCAAGAAGGATCTCTCATACACCACAAACTCCGTTGTATACTCCAGAAAGGCTGCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp GAGAATTGTAGAGCAAACGGTTTAAAGTGGCATCAGTaGGCAGCATTGAAATCCACGGAGAAAGATGAGGTT +
Preference number: 6 (lower is better)
Translates to: ENCRANGLKWHQ*AALKSTEKDEV
Trigger: AACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAACCGTTTGCTCTACAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp AAGGAGGCAGAATGTGTCCTGCTAAATGACAACTGCTaGATTCGAGGACTTCGTCTCAGACTTATTTCATCT +
Preference number: 6 (lower is better)
Translates to: KEAECVLLNDNC*IRGLRLRLISS
Trigger: AGATGAAATAAGTCTGAGACGAAGTCCTCGAATCAAGCAGTTGTCATTTAGCAGGACACATTCTGCCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp GAGAATTGTAGAGCAAACGGTTTAAAGTGGCATCAGTTGGCAGCATaGAAATCCACGGAGAAAGATGAGGTTCACTTGACAGCTTTATTC +
Preference number: 6 (lower is better)
Translates to: ENCRANGLKWHQLAA*KSTEKDEVHLTALF
Trigger: GAATAAAGCTGTCAAGTGAACCTCATCTTTCTCCGTGGATTTCAATGCTGCCAACTGATGCCACTTTAAACCGTTTGCTCTACAATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS TCA 72 bp CGGTTGAGATCATGTTTCGAGCACATGCATACAACATaGTTTCTCCTGTGGCCACAGTCTTTTGGTAATTTT +
Preference number: 6 (lower is better)
Translates to: RLRSCFEHMHTT*FLLWPQSFGNF
Trigger: AAAATTACCAAAAGACTGTGGCCACAGGAGAAATCATGTTGTATGCATGTGCTCGAAACATGATCTCAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 90 bp TCACCTCCTCCACTACTTGTTCCATATCATCTGTACTTTCATTTATaGAAGGGCATTGCAGACACATCTCCAAACGAAGAAATACCTGAA +
Preference number: 6 (lower is better)
Translates to: SPPPLLVPYHLYFHL*KGIADTSPNEEIPE
Trigger: TTCAGGTATTTCTTCGTTTGGAGATGTGTCTGCAATGCCCTTCAATAAATGAAAGTACAGATGATATGGAACAAGTAGTGGAGGAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CCA 72 bp ATACAACGGAGTTTGTGGTGTATGAGAGATCCTTCTTaGTGTAGTTTTAGAAAAGCTCAGAGATTTCTGGTG +
Preference number: 6 (lower is better)
Translates to: IQRSLWCMRDPS*CSFRKAQRFLV
Trigger: CACCAGAAATCTCTGAGCTTTTCTAAAACTACACCAAGAAGGATCTCTCATACACCACAAACTCCGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5
CDS CAA 72 bp CCACTACTTGTTCCATATCATCTGTACTTTCATTTATaGAAGGGCATTGCAGACACATCTCCAAACGAAGAA +
Preference number: 6 (lower is better)
Translates to: PLLVPYHLYFHL*KGIADTSPNEE
Trigger: TTCTTCGTTTGGAGATGTGTCTGCAATGCCCTTCAATAAATGAAAGTACAGATGATATGGAACAAGTAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268138.12
ENST00000560985.5