RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000146426

Ensembl transcript IDs: ENST00000275246.11, ENST00000360366.8, ENST00000431620.6, ENST00000449545.2, ENST00000456877.6, ENST00000460692.2, ENST00000461783.7, ENST00000462408.2, ENST00000528391.6, ENST00000528535.5, ENST00000529824.6, ENST00000535064.1, ENST00000535231.5, ENST00000535583.1, ENST00000537845.1, ENST00000538270.5, ENST00000539296.1, ENST00000543712.5, ENST00000546145.1, ENST00000682666.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCTCTGTGTCCACAAGCTCCTGGATGACTTTGCGGAGGCGGTCTaGATCAGACAGGTGGCGGGCCAGAGACCTCGGAGGAGGATCCTG +
Preference number: 1 (lower is better)
Translates to: LLCVHKLLDDFAEAV*IRQVAGQRPRRRIL
Trigger: CAGGATCCTCCTCCGAGGTCTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACACAGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
3UTR TCA 90 bp TCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGATaGCTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGAG +
Preference number: 1 (lower is better)
Translates to: SNPSRRTSLCPQAPG*LCGGGLHQTGGGPE
Trigger: CTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
3UTR-3UTR TCA 90 bp GTGTCCACAAGCTCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCTCGGAGGAGGATCCTaGTTCTCCCGCGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: VSTSSWMTLRRRSASDRWLGGGS*FSRGPS
Trigger: GGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAG...CCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
3UTR-3UTR TCA 90 bp GCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGATGACTCCATGCCGTTGGCCTaGCTGTCGTTAAAACTCCTG +
Preference number: 2 (lower is better)
Translates to: AAQILHVGLLCVHKLLDDSMPLA*LSLKLL
Trigger: CAGGAGTTTTAACGACAGTCAGGCCAACGGCATGGA...GTCATCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543712.5
3UTR-3UTR GCA 90 bp CCTTCTGAAACTCAAGCATCTCTGGCAAACTTCCAAAAAGTGACTCCATCTCATCCCGCGGTCCTTCCATaGCGTTGGCCTGACTGTCGT +
Preference number: 2 (lower is better)
Translates to: PSETQASLANFQKVTPSHPAVLP*RWPDCR
Trigger: ACGACAGTCAGGCCAACGGCATGGAAGGACCGCGGG...ATGAGATGGAGTCACTTTTTGGAAGTTTGCCAGAGATGCTTGAGTTTCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543712.5
3UTR GCA 72 bp GTCCACAAGCTCCTGGATGACTTTGCGGAGGCGGTCTaGATCAGACAGGTGGCGGGCCAGAGACCTCGGAGG +
Preference number: 3 (lower is better)
Translates to: VHKLLDDFAEAV*IRQVAGQRPRR
Trigger: CCTCCGAGGTCTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
3UTR TCA 72 bp TCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGATaGCTTTGCGGAGGCGGTCTGCATCAGACAGGTGGC +
Preference number: 3 (lower is better)
Translates to: SRRTSLCPQAPG*LCGGGLHQTGG
Trigger: GCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CCA 90 bp GGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGAGACCTCGGAGGAGGATCCTTCTGCATCAGACAGGTaGCGGGCCAGAGACCTCGGA +
Preference number: 4 (lower is better)
Translates to: GGGLHQTGGGPETSEEDPSASDR*RARDLG
Trigger: TCCGAGGTCTCTGGCCCGCCACCTGTCTGATGCAGA...AGGATCCTCCTCCGAGGTCTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp CCTCGGAGGAGGATCCTGATTCTCCCGCGGTCCTTCCATGCCGTTGGCCTGACTCTCGGAGGAGGATCCTaGTTCTCCCGCGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PRRRILILPRSFHAVGLTLGGGS*FSRGPS
Trigger: GGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAG...AGTCAGGCCAACGGCATGGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp AAGCTCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGCCACAAGCTCCTGGATaGCTTTGCGGAGGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: KLLDDFAEAVCIRQVAGQPQAPG*LCGGGL
Trigger: CAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGG...CTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CCA 90 bp TCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGAGACGTGTCCACAAGCTCCTaGATGACTTTGCGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SWMTLRRRSASDRWRARDVSTSS*MTLRRR
Trigger: CCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACAC...GTCTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR GCA 90 bp CAGAGACCTCGGAGGAGGATCCTGATTCTCCCGCGGTCCTTCCATGCCGTTGGCGGATGTACACAGGGTTaGTTTTGTGTCCGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QRPRRRILILPRSFHAVGGCTQG*FCVRRP
Trigger: CGGCCTCCGGACACAAAAGCAACCCTGTGTACATCC...GCCAACGGCATGGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAGGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CCA 90 bp CCTCGGAGGAGGATCCTGATTCTCCCGCGGTCCTTCCATGCCGTTGGCCTGACTAATTCCTCCAGCAGTTaGGACTGGTTAGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRRRILILPRSFHAVGLTNSSSS*DWLGGG
Trigger: GCCCCCTCCTAACCAGTCCCAACTGCTGGAGGAATT...AGTCAGGCCAACGGCATGGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGACCCGCGGTCCTTCCATaGCGTTGGCCTGACTGTCGT +
Preference number: 4 (lower is better)
Translates to: RGSSNPSRRTSLCPQAPGPAVLP*RWPDCR
Trigger: ACGACAGTCAGGCCAACGGCATGGAAGGACCGCGGG...TCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR GCA 90 bp AGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGATTTGCGGAGGCGGTCTaGATCAGACAGGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RGSSNPSRRTSLCPQAPGFAEAV*IRQVAG
Trigger: GCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAA...TCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CCA 90 bp GTGTCCACAAGCTCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGGACTCTTCTGGTCCCTaGAGAACAGGTCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: VSTSSWMTLRRRSASDRWDSSGP*RTGHCL
Trigger: CAGACAGTGACCTGTTCTCCAGGGACCAGAAGAGTC...CCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp AGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGAGCCGGGCAATCAGAGTaGGTCCGACGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGSSNPSRRTSLCPQAPGAGQSE*VRRSSQ
Trigger: CTGAGAAGAGCGTCGGACTCACTCTGATTGCCCGGC...TCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp CTCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGAGACAAACTTCCAAAAAGTaGCTCCATCTCATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LLDDFAEAVCIRQVAGQRQTSKK*LHLILG
Trigger: ACCCAAGATGAGATGGAGTCACTTTTTGGAAGTTTG...TCTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CCA 90 bp TCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGAGACGACTCCATCTCATCTTaGGTAAGAAAGGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: SWMTLRRRSASDRWRARDDSISS*VRKVSF
Trigger: GAATGAGACCTTTCTTACCCAAGATGAGATGGAGTC...GTCTCTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp AGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGATCCTGCACAGTGCAGTaGTCTGCTCAGCACTCATTG +
Preference number: 4 (lower is better)
Translates to: RGSSNPSRRTSLCPQAPGSCTVQ*SAQHSL
Trigger: CAATGAGTGCTGAGCAGATCACTGCACTGTGCAGGA...TCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CCA 90 bp CCAAGTATAATTCAAAGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTGGCAGCAGACTCTTCTaGTCCCTGGAGAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: PSIIQRGSSNPSRRTSLCGSRLF*SLENRS
Trigger: TGACCTGTTCTCCAGGGACCAGAAGAGTCTGCTGCC...ACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCTTTGAATTATACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp CCAAGTATAATTCAAAGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTTCCATGCCGTTGGCCTaGCTGTCGTTAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: PSIIQRGSSNPSRRTSLCSMPLA*LSLKLL
Trigger: CAGGAGTTTTAACGACAGTCAGGCCAACGGCATGGA...ACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCTTTGAATTATACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR TCA 90 bp TTCCATGCCGTTGGCCTGACTGTCGTTAAAACTCCTGCACAGTGCAGTGATCTGAGAAAGGTCTCATTCTaGAGTGGCTCCAAGTATAAT +
Preference number: 4 (lower is better)
Translates to: FHAVGLTVVKTPAQCSDLRKVSF*SGSKYN
Trigger: ATTATACTTGGAGCCACTTCAGAATGAGACCTTTCT...CAGATCACTGCACTGTGCAGGAGTTTTAACGACAGTCAGGCCAACGGCATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR GCA 90 bp CCTTCTGAAACTCAAGCATCTCTGGCAAACTTCCAAAAAGTGACTCCATCTCATCACAGTGCAGTGATCTaGTCAGCACTCATTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSETQASLANFQKVTPSHHSAVI*SALIGC
Trigger: ACAGCCAATGAGTGCTGAGCAGATCACTGCACTGTG...ATGAGATGGAGTCACTTTTTGGAAGTTTGCCAGAGATGCTTGAGTTTCAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS GCA 90 bp CGGGGTGTGGGTATTTCCCGGGAGAAGTGCTCTTGGAGTCCTGCCTaGCCTCAGCCGTGGGGCAGCCGCTGCTCTGGGTGCCGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: RGVGISREKCSWSPA*PQPWGSRCSGCRCS
Trigger: TGAGCAGCGGCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 90 bp AAGCCGGGGTGTGGGTATTTCCCGGGAGAAGTGCTCTTGGAGTCCTaGCTGCCCTCAGCCGTGGGGCAGCCGCTGCTCTGGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KPGCGYFPGEVLLES*LPSAVGQPLLWVPL
Trigger: CAGCGGCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 90 bp CTCTTCCTCCACAGCAGCACCGGTGATTGGGGGAAGCTGGCCCCCTaGTCTGTTTCCACCCATGCCGGGAGCCTGCCTGCTCTAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFLHSSTGDWGKLAP*SVSTHAGSLPALER
Trigger: CCTTTCTAGAGCAGGCAGGCTCCCGGCATGGGTGGAAACAGAGCAGGGGGCCAGCTTCCCCCAATCACCGGTGCTGCTGTGGAGGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275246.11
CDS GCA 90 bp AAGGGGAGTCGTACCAGGATGACTCAGAACTCAGGGAGCTGCCTTTaGTGGACCGCAGGCGAGAGTCCGTGGGAGAGGGGCGATGGCTGG +
Preference number: 5 (lower is better)
Translates to: KGSRTRMTQNSGSCL*WTAGESPWERGDGW
Trigger: CCAGCCATCGCCCCTCTCCCACGGACTCTCGCCTGCGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGTACGACTCCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp GAAGCTGGCCCCCTGCTCTGTTTCCACCCATGCCGGGAGCCTGCCTaGTCTAGAAAGGCACCGGGTTACCACAGACGTGGAGACAATGGG +
Preference number: 5 (lower is better)
Translates to: EAGPLLCFHPCREPA*SRKAPGYHRRGDNG
Trigger: CCCATTGTCTCCACGTCTGTGGTAACCCGGTGCCTTTCTAGAGCAGGCAGGCTCCCGGCATGGGTGGAAACAGAGCAGGGGGCCAGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275246.11
CDS TCA 90 bp CTCGCTCAGCTCTCCAGCATTGCCCCAAGGGGAGTCGTACCAGGATaGCTCAGAACTCAGGGAGCTGCCTTTGCTGGACCGCAGGCGAGA +
Preference number: 5 (lower is better)
Translates to: LAQLSSIAPRGVVPG*LRTQGAAFAGPQAR
Trigger: TCTCGCCTGCGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGTACGACTCCCCTTGGGGCAATGCTGGAGAGCTGAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp AACATACCAGAGCATGGAAAGAGGAAACAGACAAGATGCCCAGCCTaGCGAGGGCCAGCTTGGAGGGGCGGCTGGCGGCTGCAAGGAGAC +
Preference number: 5 (lower is better)
Translates to: NIPEHGKRKQTRCPA*RGPAWRGGWRLQGD
Trigger: GTCTCCTTGCAGCCGCCAGCCGCCCCTCCAAGCTGGCCCTCGGCAGGCTGGGCATCTTGTCTGTTTCCTCTTTCCATGCTCTGGTATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS-3UTR CAA 90 bp AAGCTCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGCGGGCCAGTACACAGGGTTGCTTTaGTGTCCGGAGGCCGGGCAA +
Preference number: 5 (lower is better)
Translates to: KLLDDFAEAVCIRQVAGQYTGLL*CPEAGQ
Trigger: TTGCCCGGCCTCCGGACACAAAAGCAACCCTGTGTA...CTGGCCCGCCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS-3UTR CAA 90 bp CAGAGACCTCGGAGGAGGATCCTGATTCTCCCGCGGTCCTTCCATGCCGTTGGCGAATTCCTCCAGCAGTaGGGACTGGTTAGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: QRPRRRILILPRSFHAVGEFLQQ*GLVRRG
Trigger: CCCCCTCCTAACCAGTCCCAACTGCTGGAGGAATTC...GCCAACGGCATGGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAGGTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS TCA 90 bp AGACTGCCACGCTGTTCGGTGAGCTGGTCCCGTCACTTTGCAGTATaGTCTTTCGGCAGATCCCTGGCGGGAGATCCCTCTCCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: RLPRCSVSWSRHFAV*SFGRSLAGDPSPSA
Trigger: TGCGGAGGGAGAGGGATCTCCCGCCAGGGATCTGCCGAAAGATCATACTGCAAAGTGACGGGACCAGCTCACCGAACAGCGTGGCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS GCA 90 bp TGCCGCTGCTCAAGCTGCCCTCGTCAGAGTCCAGCAAGGTTCCCTTaGCAGTCTCACCGGTCCACTCGTTGCTGGAGGAATTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: CRCSSCPRQSPARFP*QSHRSTRCWRNSSG
Trigger: TCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGACTCTGACGAGGGCAGCTTGAGCAGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 90 bp GCTGCACCGGCTCACTGCAGTCCTCTGCAGGCACTTTGCTGGGGTTaGCACCATTGTGGAACTCGACCCTTAAACACCCATCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: AAPAHCSPLQALCWG*HHCGTRPLNTHPAS
Trigger: GGAAGCTGGATGGGTGTTTAAGGGTCGAGTTCCACAATGGTGGCAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGCCGGTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp ACAGGGGAGGTTTCCGATGCTAAGGTAGGTGAGTACCTCAGCAGCTaGACCGGCTCACTGCAGTCCTCTGCAGGCACTTTGCTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TGEVSDAKVGEYLSS*TGSLQSSAGTLLGL
Trigger: CAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGCCGGTGCAGCTGCTGAGGTACTCACCTACCTTAGCATCGGAAACCTCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp GGGCATTTGTCCTGTGCGTGGAGTAGGCAACACCTCTGGAGACCTTaGATGTGGGGCCACCGAGTCTCGATGCGTAAGGCTGGTTACTCT +
Preference number: 5 (lower is better)
Translates to: GHLSCAWSRQHLWRP*MWGHRVSMRKAGYS
Trigger: AGAGTAACCAGCCTTACGCATCGAGACTCGGTGGCCCCACATGCAAGGTCTCCAGAGGTGTTGCCTACTCCACGCACAGGACAAATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 90 bp AGGAAAGAGACTGCCACGCTGTTCGGTGAGCTGGTCCCGTCACTTTaGAGTATGATCTTTCGGCAGATCCCTGGCGGGAGATCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RKETATLFGELVPSL*SMIFRQIPGGRSLS
Trigger: GGAGAGGGATCTCCCGCCAGGGATCTGCCGAAAGATCATACTGCAAAGTGACGGGACCAGCTCACCGAACAGCGTGGCAGTCTCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS-3UTR CAA 90 bp GTGTCCACAAGCTCCTGGATGACTTTGCGGAGGCGGTCTGCATCAGACAGGTGGAGGATGTACACAGGGTaGCTTTTGTGTCCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VSTSSWMTLRRRSASDRWRMYTG*LLCPEA
Trigger: GGCCTCCGGACACAAAAGCAACCCTGTGTACATCCT...CCACCTGTCTGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCTTGTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS GCA 90 bp GGCAACACCTCTGGAGACCTTGCATGTGGGGCCACCGAGTCTCGATaGGTAAGGCTGGTTACTCTTAAAGTGAGAAAGGCAGCTTCGGGC +
Preference number: 5 (lower is better)
Translates to: GNTSGDLACGATESR*VRLVTLKVRKAASG
Trigger: GCCCGAAGCTGCCTTTCTCACTTTAAGAGTAACCAGCCTTACGCATCGAGACTCGGTGGCCCCACATGCAAGGTCTCCAGAGGTGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS TCA 90 bp CGTGGCCAACAGAGTGGAAGCCATTCTCAGTTGAGAAAGCAGCACTaGTGCCCTGGAAATCCTTCCCTGGGGCATTTGTCCTGTGCGTGG +
Preference number: 5 (lower is better)
Translates to: RGQQSGSHSQLRKQH*CPGNPSLGHLSCAW
Trigger: CCACGCACAGGACAAATGCCCCAGGGAAGGATTTCCAGGGCATCAGTGCTGCTTTCTCAACTGAGAATGGCTTCCACTCTGTTGGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 90 bp CAATGTCGGAAGCAAAAGAGACACGGTTGCTCAGGCTGGCATGCGTaGCCATGTATTCATCAGAAAGGCGGATACCTGAGGGGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: QCRKQKRHGCSGWHA*PCIHQKGGYLRGRG
Trigger: GCCTCTCCCCCTCAGGTATCCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 90 bp ATTCATCAGAAAGGCGGATACCTGAGGGGGAGAGGCTCCCCAGGTTaGCATCTTTGTACAGTTCCCGGAGGGAGGAGAGGGAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: IHQKGGYLRGRGSPG*HLCTVPGGRRGKSF
Trigger: AAAGCTCTTCCCTCTCCTCCCTCCGGGAACTGTACAAAGATGCCAACCTGGGGAGCCTCTCCCCCTCAGGTATCCGCCTTTCTGATGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp CCACTCTGGAGGGCACATCAATGTCGGAAGCAAAAGAGACACGGTTaGTCAGGCTGGCATGCGTGCCCATGTATTCATCAGAAAGGCGGA +
Preference number: 5 (lower is better)
Translates to: PLWRAHQCRKQKRHG*SGWHACPCIHQKGG
Trigger: TCCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTGATGTGCCCTCCAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS-3UTR CAA 90 bp AGAGGCAGCTCAAATCCTTCACGTAGGACTTCTCTGTGTCCACAAGCTCCTGGAAGCTCCTGGATGACTTaGCGGAGGCGGTCTGCATCA +
Preference number: 5 (lower is better)
Translates to: RGSSNPSRRTSLCPQAPGSSWMT*RRRSAS
Trigger: TGATGCAGACCGCCTCCGCAAAGTCATCCAGGAGCT...TCCAGGAGCTTGTGGACACAGAGAAGTCCTACGTGAAGGATTTGAGCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS TCA 90 bp GTTATCTGCCAGCTCGTGGCCAACAGAGTGGAAGCCATTCTCAGTTaGGAAAGCAGCACTGATGCCCTGGAAATCCTTCCCTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: VICQLVANRVEAILS*ESSTDALEILPWGI
Trigger: AATGCCCCAGGGAAGGATTTCCAGGGCATCAGTGCTGCTTTCTCAACTGAGAATGGCTTCCACTCTGTTGGCCACGAGCTGGCAGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS TCA 90 bp CTCCAGGCTTGCTGCCTCTTGACTGTTTCAGAGTCATTCTGCTCCTaGGTGTCCAACATCTCCAATCATCCTCAGTGTCCCCATGCTGCC +
Preference number: 5 (lower is better)
Translates to: LQACCLLTVSESFCS*VSNISNHPQCPHAA
Trigger: GGCAGCATGGGGACACTGAGGATGATTGGAGATGTTGGACACTCAGGAGCAGAATGACTCTGAAACAGTCAAGAGGCAGCAAGCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS GCA 90 bp ACATCAATGTCGGAAGCAAAAGAGACACGGTTGCTCAGGCTGGCATaGGTGCCCATGTATTCATCAGAAAGGCGGATACCTGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: TSMSEAKETRLLRLA*VPMYSSERRIPEGE
Trigger: CTCCCCCTCAGGTATCCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp CGTGCATCCTTTCAGCGTTACCCAGTACTGTTTCCATTTCCTTCGTaGCACCAGCTCAAGCTTCCTTTCCTTCTGCACAGTGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: RASFQRYPVLFPFPS*HQLKLPFLLHSDQG
Trigger: CCCCTGGTCACTGTGCAGAAGGAAAGGAAGCTTGAGCTGGTGGCACGAAGGAAATGGAAACAGTACTGGGTAACGCTGAAAGGATGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS-3UTR CAA 90 bp CCTCGGAGGAGGATCCTGATTCTCCCGCGGTCCTTCCATGCCGTTGGCCTGACTTCTGCTCAGCACTCATaGGCTGTATTCTTTTTAAAG +
Preference number: 5 (lower is better)
Translates to: PRRRILILPRSFHAVGLTSAQHS*AVFFLK
Trigger: CTTTAAAAAGAATACAGCCAATGAGTGCTGAGCAGA...AGTCAGGCCAACGGCATGGAAGGACCGCGGGAGAATCAGGATCCTCCTCCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543712.5
CDS TCA 90 bp AGGCCATCGGGAAGAACGTCGCTTATAAATATCCGGCTGAGATGCTaGCGCTCATCCACCTGCGCTGTAACTGCAAACCCAAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: RPSGRTSLINIRLRC*RSSTCAVTANPKSH
Trigger: GTGTGACTTTGGGTTTGCAGTTACAGCGCAGGTGGATGAGCGTCAGCATCTCAGCCGGATATTTATAAGCGACGTTCTTCCCGATGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp ATCGCTCAGGATGTCACTCTCTTTGATGAGATTGTCGGCAAAATCTaGCAAGCCGGGGTGTGGGTATTTCCCGGGAGAAGTGCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: IAQDVTLFDEIVGKI*QAGVWVFPGRSALG
Trigger: TCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS TCA 90 bp CATTTTCAGACTGACTGTCAAGGGACTGGTGACGGATCTGCGCCTTaGGCAAAGTTCCTCTGTCCCTCTTGGTGCTGTTGGCTTTTCGTT +
Preference number: 5 (lower is better)
Translates to: HFQTDCQGTGDGSAP*AKFLCPSWCCWLFV
Trigger: AACGAAAAGCCAACAGCACCAAGAGGGACAGAGGAACTTTGCTCAAGGCGCAGATCCGTCACCAGTCCCTTGACAGTCAGTCTGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp CAGAGTCCAGCAAGGTTCCCTTGCCAGTCTCACCGGTCCACTCGTTaGTGGAGGAATTCTTCAGGACTTTTAAAGACCTGGATGAAGCTA +
Preference number: 5 (lower is better)
Translates to: QSPARFPCQSHRSTR*WRNSSGLLKTWMKL
Trigger: TAGCTTCATCCAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 90 bp TCCTTCCATGCCGTTGGCCTGACTGTCGTTAAAACTCCTGCACAGTaGAGTGATCTGCTCAGCACTCCTGAATGTCTGCTCCATTTTCTC +
Preference number: 5 (lower is better)
Translates to: SFHAVGLTVVKTPAQ*SDLLSTPECLLHFL
Trigger: GAGAAAATGGAGCAGACATTCAGGAGTGCTGAGCAGATCACTGCACTGTGCAGGAGTTTTAACGACAGTCAGGCCAACGGCATGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp CAGAGTTTCCCCAAACCAGGACATCAGTCAGAAGAACTAGGGTTCTaGTGCTCCTCCTGCACCGAAATAGAATGCCTGAATGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QSFPKPGHQSEELGF*CSSCTEIECLNVCS
Trigger: GGAGCAGACATTCAGGCATTCTATTTCGGTGCAGGAGGAGCAGCAGAACCCTAGTTCTTCTGACTGATGTCCTGGTTTGGGGAAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS TCA 90 bp CTGTTCCTTCTCAAAGAGCAGATCCAGCTGTTCCAGAGAGCTGAGTaGCTCGCTGCTGGACTCGGCGGTTTCTGTAGATGTTTCTATGTT +
Preference number: 5 (lower is better)
Translates to: LFLLKEQIQLFQRAE*LAAGLGGFCRCFYV
Trigger: AACATAGAAACATCTACAGAAACCGCCGAGTCCAGCAGCGAGTCACTCAGCTCTCTGGAACAGCTGGATCTGCTCTTTGAGAAGGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 90 bp TCGGTAACTCCCCACCTTGTAGGCTGGCCAGATAGCAGCGCATCCTaGACAGATCCATGTGAAATTTCTCAAGATTCTGCTCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: SVTPHLVGWPDSSAS*TDPCEISQDSAPIA
Trigger: AGCAATGGGAGCAGAATCTTGAGAAATTTCACATGGATCTGTTCAGGATGCGCTGCTATCTGGCCAGCCTACAAGGTGGGGAGTTACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp TTCTTTCTTGGGATGCTCTGGAACAGACTGCACTATGCTGTCTTCTaGAAACAGAGCACACCGAGGGGCACTGCTCTGATCCATGGAATT +
Preference number: 5 (lower is better)
Translates to: FFLGMLWNRLHYAVF*KQSTPRGTALIHGI
Trigger: AATTCCATGGATCAGAGCAGTGCCCCTCGGTGTGCTCTGTTTGCAGAAGACAGCATAGTGCAGTCTGTTCCAGAGCATCCCAAGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp CACGTCTGTCTCATTTATTTCTACAAGGCCTGGGACACAGGAAGCTaGCAGGACTTCATTCATCATCATCTTGCCTGCCTAAGGGGGACA +
Preference number: 5 (lower is better)
Translates to: HVCLIYFYKAWDTGS*QDFIHHHLACLRGT
Trigger: TGTCCCCCTTAGGCAGGCAAGATGATGATGAATGAAGTCCTGGCAGCTTCCTGTGTCCCAGGCCTTGTAGAAATAAATGAGACAGACGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449545.2
CDS GCA 90 bp ACTGCACTATGCTGTCTTCTGCAAACAGAGCACACCGAGGGGCACTaGTCTGATCCATGGAATTCTTCCCATAGGTCTCATAAAACAGCA +
Preference number: 5 (lower is better)
Translates to: TALCCLLQTEHTEGH*SDPWNSSHRSHKTA
Trigger: TGCTGTTTTATGAGACCTATGGGAAGAATTCCATGGATCAGAGCAGTGCCCCTCGGTGTGCTCTGTTTGCAGAAGACAGCATAGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp AGAACACATTTTCTTTCTTGGGATGCTCTGGAACAGACTGCACTATaGTGTCTTCTGCAAACAGAGCACACCGAGGGGCACTGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: RTHFLSWDALEQTAL*CLLQTEHTEGHCSD
Trigger: ATCAGAGCAGTGCCCCTCGGTGTGCTCTGTTTGCAGAAGACAGCATAGTGCAGTCTGTTCCAGAGCATCCCAAGAAAGAAAATGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp ATCAGAGTGAGTCCGACGCTCTTCTCAGAAAACAGGGCCTCCATCTaGTTAAGGTCAAGATCAGACACAGCTTCCCCATTTAAGGTCATG +
Preference number: 5 (lower is better)
Translates to: IRVSPTLFSENRASI*LRSRSDTASPFKVM
Trigger: CATGACCTTAAATGGGGAAGCTGTGTCTGATCTTGACCTTAAGCAGATGGAGGCCCTGTTTTCTGAGAAGAGCGTCGGACTCACTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 90 bp AGTTTCCCCAAACCAGGACATCAGTCAGAAGAACTAGGGTTCTGCTaGTCCTCCTGCACCGAAATAGAATGCCTGAATGTCTGCTCCATT +
Preference number: 5 (lower is better)
Translates to: SFPKPGHQSEELGFC*SSCTEIECLNVCSI
Trigger: AATGGAGCAGACATTCAGGCATTCTATTTCGGTGCAGGAGGAGCAGCAGAACCCTAGTTCTTCTGACTGATGTCCTGGTTTGGGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS TCA 90 bp ACCCGGGTACCTGCTGTTGGTAATAACAGGACAGGGAGGCTGAAGTaGAACACTCGAAGACTGTACAGAATCCTGGATTTTCTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: TRVPAVGNNRTGRLK*NTRRLYRILDFLKA
Trigger: AGCTTTCAGAAAATCCAGGATTCTGTACAGTCTTCGAGTGTTTCACTTCAGCCTCCCTGTCCTGTTATTACCAACAGCAGGTACCCGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS TCA 90 bp TCAGTGTCCCCATGCTGCCATCTGCTTAAACTTAACCCAGGTAGCTaGAGACGAAAGACTTCATATTCTGCTAGAAGCTTCGAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: SVSPCCHLLKLNPGS*RRKTSYSARSFEAP
Trigger: CGGAGCTTCGAAGCTTCTAGCAGAATATGAAGTCTTTCGTCTTCAGCTACCTGGGTTAAGTTTAAGCAGATGGCAGCATGGGGACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS TCA 90 bp TTTCTATGTTCTCAGTGTTGGTCCTGCTCATTTCCAACTCTCGCATaGAATTCTCATAAATGTTCTGCCGGAGGGGATCGCTGCCAATCG +
Preference number: 5 (lower is better)
Translates to: FLCSQCWSCSFPTLA*NSHKCSAGGDRCQS
Trigger: CGATTGGCAGCGATCCCCTCCGGCAGAACATTTATGAGAATTTCATGCGAGAGTTGGAAATGAGCAGGACCAACACTGAGAACATAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 90 bp AGGAAGGCATGCTTGCAACCTCTGGATTCAATCAGAAACAATGCCTaGGAGTACAGAGCCTTCTCAATAGGTAACGGCGGGTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: RKACLQPLDSIRNNA*EYRAFSIGNGGFLL
Trigger: TAAAAGGAACCCGCCGTTACCTATTGAGAAGGCTCTGTACTCTCAGGCATTGTTTCTGATTGAATCCAGAGGTTGCAAGCATGCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS TCA 90 bp GAGAATTCAAGAAGATTTGGAAGAAGCTCCAGGCTTGCTGCCTCTTaGCTGTTTCAGAGTCATTCTGCTCCTGAGTGTCCAACATCTCCA +
Preference number: 5 (lower is better)
Translates to: ENSRRFGRSSRLAAS*LFQSHSAPECPTSP
Trigger: TGGAGATGTTGGACACTCAGGAGCAGAATGACTCTGAAACAGTCAAGAGGCAGCAAGCCTGGAGCTTCTTCCAAATCTTCTTGAATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS GCA 90 bp GCTTTTCCTAGAGACAGAAATGGATTCAACCAGGAAACCGTAGAGTaGATCAGAAGCTCTCCCATCGAAAGTTCTGTTACCAGTGTCCGT +
Preference number: 5 (lower is better)
Translates to: AFPRDRNGFNQETVE*IRSSPIESSVTSVR
Trigger: ACGGACACTGGTAACAGAACTTTCGATGGGAGAGCTTCTGATGCACTCTACGGTTTCCTGGTTGAATCCATTTCTGTCTCTAGGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529824.6
CDS TCA 90 bp AGTCTGGATTTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTTaGACCATATATATGCAGAAGTTCATCGACCTCACTGGAGTTACT +
Preference number: 5 (lower is better)
Translates to: SLDFPCIVSGNTVYC*TIYMQKFIDLTGVT
Trigger: AGTAACTCCAGTGAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAAATCCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360366.8
ENST00000528391.6
CDS TCA 90 bp AGTCTGGGACCGAAGAGCAAGAATTCCATGTGGACTTGGAGTTCCTaGCCATTCAGCAGTCATTCATTTCAGTTAAAGGTAGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: SLGPKSKNSMWTWSS*PFSSHSFQLKVDFA
Trigger: AGCGAAGTCTACCTTTAACTGAAATGAATGACTGCTGAATGGTCAGGAACTCCAAGTCCACATGGAATTCTTGCTCTTCGGTCCCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449545.2
CDS GCA 90 bp GCTTTTCCTAGAGACAGAAATGGATTCAACCAGGAAACCGTAGAGTaGATCAGAAGCTCTCCCATCGAAAGTTCTGTTACCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AFPRDRNGFNQETVE*IRSSPIESSVTSFS
Trigger: AGAGAAGGAGGTAACAGAACTTTCGATGGGAGAGCTTCTGATGCACTCTACGGTTTCCTGGTTGAATCCATTTCTGTCTCTAGGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000682666.1
CDS GCA 90 bp GTGTCCAACATCTCCAATCATCCTCAGTGTCCCCATGCTGCCATCTaGTTAAACTTAACCCAGGTAGCTGAAGACGAAAGACTTCATATT +
Preference number: 5 (lower is better)
Translates to: VSNISNHPQCPHAAI*LNLTQVAEDERLHI
Trigger: AATATGAAGTCTTTCGTCTTCAGCTACCTGGGTTAAGTTTAAGCAGATGGCAGCATGGGGACACTGAGGATGATTGGAGATGTTGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS TCA 90 bp AGTCTGGATTTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTTaGACCATATATATGCAGAAGTTCATCGACCTGAGTTATAGAAGG +
Preference number: 5 (lower is better)
Translates to: SLDFPCIVSGNTVYC*TIYMQKFIDLSYRR
Trigger: CCTTCTATAACTCAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAAATCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456877.6
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 90 bp TTGTCATTCATACACAGAGCCCTGCTTAAACTTAACCCAGGTAGCTaGAGACGAAAGACTTCATATTCTGCTAGAAGCTTCGAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: LSFIHRALLKLNPGS*RRKTSYSARSFEAP
Trigger: CGGAGCTTCGAAGCTTCTAGCAGAATATGAAGTCTTTCGTCTTCAGCTACCTGGGTTAAGTTTAAGCAGGGCTCTGTGTATGAATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS TCA 90 bp AGGCGATCCTTACACGTTTTCTCCAGTGGTAATTCACACTTTATGTaGCGCCTGAAGTTCTCCCTCAGAATAGAACGAATCACCTTAACA +
Preference number: 5 (lower is better)
Translates to: RRSLHVFSSGNSHFM*RLKFSLRIERITLT
Trigger: TGTTAAGGTGATTCGTTCTATTCTGAGGGAGAACTTCAGGCGTCACATAAAGTGTGAATTACCACTGGAGAAAACGTGTAAGGATCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS TCA 90 bp ACTGCAACACAACTGAAAGATGGTTTCTGGCCGTCCTTCTATTTCTaGCTTCGTATGGATCAGTTCCCATATGGAATTATTTTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: TATQLKDGFWPSFYF*LRMDQFPYGIIFCP
Trigger: GGGACAGAAAATAATTCCATATGGGAACTGATCCATACGAAGTCAGAAATAGAAGGACGGCCAGAAACCATCTTTCAGTTGTGTTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 90 bp TATAAAATTAAACCTGCTCCAACAGGTAATACAGGAAGGCATGCTTaGAACCTCTGGATTCAATCAGAAACAATGCCTGAGAGTACAGAG +
Preference number: 5 (lower is better)
Translates to: YKIKPAPTGNTGRHA*NLWIQSETMPESTE
Trigger: CTCTGTACTCTCAGGCATTGTTTCTGATTGAATCCAGAGGTTGCAAGCATGCCTTCCTGTATTACCTGTTGGAGCAGGTTTAATTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS GCA 90 bp TATTCCAATCAAATCTGGTCCTGGGAAGTGGGTATCTCTTACAGATaGAATACTGTTCATCTGAGTGGATCCCCAAAAAGAACAATTATG +
Preference number: 5 (lower is better)
Translates to: YSNQIWSWEVGISYR*NTVHLSGSPKRTIM
Trigger: CATAATTGTTCTTTTTGGGGATCCACTCAGATGAACAGTATTGCATCTGTAAGAGATACCCACTTCCCAGGACCAGATTTGATTGGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS GCA 90 bp TTTCATCATAAACCTGTTGTTGCATATATTCATATGGTGCAGGGATaGAATACTCAACATTGTCATCTACTAATTTTCGAAGCTGTAGGC +
Preference number: 5 (lower is better)
Translates to: FHHKPVVAYIHMVQG*NTQHCHLLIFEAVG
Trigger: GCCTACAGCTTCGAAAATTAGTAGATGACAATGTTGAGTATTGCATCCCTGCACCATATGAATATATGCAACAACAGGTTTATGATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp TCCTGCCTGCCCTCAGCCGTGGGGCAGCCGCTGCTCTaGGTGCCGCTGCTCAAGCTGCCCTCGTCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: SCLPSAVGQPLL*VPLLKLPSSES
Trigger: GGACTCTGACGAGGGCAGCTTGAGCAGCGGCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp ACCGCAGGCGAGAGTCCGTGGGAGAGGGGCGATGGCTaGGCAGGGAATCGGCGCTGGACCCCCTCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: TAGESPWERGDG*AGNRRWTPSWL
Trigger: AAGCCAGGAGGGGGTCCAGCGCCGATTCCCTGCCCAGCCATCGCCCCTCTCCCACGGACTCTCGCCTGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp GGGAGCTGCCTTTGCTGGACCGCAGGCGAGAGTCCGTaGGAGAGGGGCGATGGCTGGGCAGGGAATCGGCGC +
Preference number: 6 (lower is better)
Translates to: GSCLCWTAGESP*ERGDGWAGNRR
Trigger: GCGCCGATTCCCTGCCCAGCCATCGCCCCTCTCCCACGGACTCTCGCCTGCGGTCCAGCAAAGGCAGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp CTCGCGGGAACGCCGGGAGGAGTTGGAGAAGTTCTGGGGGTCACTTaGTTCTCCACTTGGACGCGCGCTGTGCGCCTGCGGCGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: LAGTPGGVGEVLGVT*FSTWTRAVRLRRPR
Trigger: CCGCGGCCGCCGCAGGCGCACAGCGCGCGTCCAAGTGGAGAACAAAGTGACCCCCAGAACTTCTCCAACTCCTCCCGGCGTTCCCGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682666.1
CDS GCA 72 bp GGCCTGAGGGGACGAAGGCCGGCCACCCTGCCTCCATaGAGAGCTCTGAATGGCCCTCCCAGCTCCACAGCT +
Preference number: 6 (lower is better)
Translates to: GLRGRRPATLPP*RALNGPPSSTA
Trigger: AGCTGTGGAGCTGGGAGGGCCATTCAGAGCTCTGCATGGAGGCAGGGTGGCCGGCCTTCGTCCCCTCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456877.6
ENST00000528391.6
CDS CCA 72 bp GAGAAGTGCTCTTGGAGTCCTGCCTGCCCTCAGCCGTaGGGCAGCCGCTGCTCTGGGTGCCGCTGCTCAAGC +
Preference number: 6 (lower is better)
Translates to: EKCSWSPACPQP*GSRCSGCRCSS
Trigger: GCTTGAGCAGCGGCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp GCTGGATCTCTATTGAGGGGAGCTGCCTTGCCCTGCTaGCCTGAGGGGACGAAGGCCGGCCACCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: AGSLLRGAALPC*PEGTKAGHPAS
Trigger: GGAGGCAGGGTGGCCGGCCTTCGTCCCCTCAGGCCAGCAGGGCAAGGCAGCTCCCCTCAATAGAGATCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456877.6
ENST00000528391.6
CDS TCA 72 bp CCCGACTCCGGGCCAGGCTGCTGCTCAGCCTCGGGGTaGACGTCTGGGTCCTCGGAAATCCTCAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: PDSGPGCCSASG*TSGSSEILSLW
Trigger: CCAGAGACTGAGGATTTCCGAGGACCCAGACGTTCACCCCGAGGCTGAGCAGCAGCCTGGCCCGGAGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp CACAGCAGCACCGGTGATTGGGGGAAGCTGGCCCCCTaGTCTGTTTCCACCCATGCCGGGAGCCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HSSTGDWGKLAP*SVSTHAGSLPA
Trigger: AGCAGGCAGGCTCCCGGCATGGGTGGAAACAGAGCAGGGGGCCAGCTTCCCCCAATCACCGGTGCTGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275246.11
CDS GCA 72 bp TGGGGCAGCCGCTGCTCTGGGTGCCGCTGCTCAAGCTaGCCTCGTCAGAGTCCAGCAAGGTTCCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: WGSRCSGCRCSS*PRQSPARFPCQ
Trigger: CTGGCAAGGGAACCTTGCTGGACTCTGACGAGGGCAGCTTGAGCAGCGGCACCCAGAGCAGCGGCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 72 bp GGTATTTCCCGGGAGAAGTGCTCTTGGAGTCCTGCCTaGCCTCAGCCGTGGGGCAGCCGCTGCTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: GISREKCSWSPA*PQPWGSRCSGC
Trigger: GCACCCAGAGCAGCGGCTGCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGGAAATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 72 bp CTGCCAAGCCGGGGTGTGGGTATTTCCCGGGAGAAGTaGTCTTGGAGTCCTGCCTGCCCTCAGCCGTGGGGC +
Preference number: 6 (lower is better)
Translates to: LPSRGVGISREK*SWSPACPQPWG
Trigger: GCCCCACGGCTGAGGGCAGGCAGGACTCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCGGCTTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp TGCCCAGCCTGCCGAGGGCCAGCTTGGAGGGGCGGCTaGCGGCTGCAAGGAGACTCTTTGGGTTCGGTAACT +
Preference number: 6 (lower is better)
Translates to: CPACRGPAWRGG*RLQGDSLGSVT
Trigger: AGTTACCGAACCCAAAGAGTCTCCTTGCAGCCGCCAGCCGCCCCTCCAAGCTGGCCCTCGGCAGGCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp ATCTCTATTGAGGGGAGCTGCCTTGCCCTGCTGGCCTaGGGGGACGAAGGCCGGCCACCCTGCCTCCATGCA +
Preference number: 6 (lower is better)
Translates to: ISIEGSCLALLA*GDEGRPPCLHA
Trigger: TGCATGGAGGCAGGGTGGCCGGCCTTCGTCCCCTCAGGCCAGCAGGGCAAGGCAGCTCCCCTCAATAGAGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000456877.6
ENST00000528391.6
CDS CCA 72 bp GATGGCTGGGCAGGGAATCGGCGCTGGACCCCCTCCTaGCTTCAGGCACAGGGGAGGTTTCCGATGCTAAGG +
Preference number: 6 (lower is better)
Translates to: DGWAGNRRWTPS*LQAQGRFPMLR
Trigger: CCTTAGCATCGGAAACCTCCCCTGTGCCTGAAGCCAGGAGGGGGTCCAGCGCCGATTCCCTGCCCAGCCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AAGGCCGGCCACCCTGCCTCCATGCAGAGCTCTGAATaGCCCTCCCAGCTCCACAGCTCGCTGTGGGACAAG +
Preference number: 6 (lower is better)
Translates to: KAGHPASMQSSE*PSQLHSSLWDK
Trigger: CTTGTCCCACAGCGAGCTGTGGAGCTGGGAGGGCCATTCAGAGCTCTGCATGGAGGCAGGGTGGCCGGCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456877.6
CDS GCA 72 bp CGTACCAGGATGACTCAGAACTCAGGGAGCTGCCTTTaGTGGACCGCAGGCGAGAGTCCGTGGGAGAGGGGC +
Preference number: 6 (lower is better)
Translates to: RTRMTQNSGSCL*WTAGESPWERG
Trigger: GCCCCTCTCCCACGGACTCTCGCCTGCGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp GATGAGCACTCGGGGGCTCTTGCGGTCTTCGCCCGGTaGGGTGGAGGCAATGCTCTCATTCCTCCCGTAGCA +
Preference number: 6 (lower is better)
Translates to: DEHSGALAVFAR*GGGNALIPPVA
Trigger: TGCTACGGGAGGAATGAGAGCATTGCCTCCACCCCACCGGGCGAAGACCGCAAGAGCCCCCGAGTGCTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp AAACAGACAAGATGCCCAGCCTGCCGAGGGCCAGCTTaGAGGGGCGGCTGGCGGCTGCAAGGAGACTCTTTG +
Preference number: 6 (lower is better)
Translates to: KQTRCPACRGPA*RGGWRLQGDSL
Trigger: CAAAGAGTCTCCTTGCAGCCGCCAGCCGCCCCTCCAAGCTGGCCCTCGGCAGGCTGGGCATCTTGTCTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp CCCTCGCGGGAACGCCGGGAGGAGTTGGAGAAGTTCTaGGGGTCACTTTGTTCTCCACTTGGACGCGCGCTG +
Preference number: 6 (lower is better)
Translates to: PSRERREELEKF*GSLCSPLGRAL
Trigger: CAGCGCGCGTCCAAGTGGAGAACAAAGTGACCCCCAGAACTTCTCCAACTCCTCCCGGCGTTCCCGCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682666.1
CDS CAA 72 bp GCTTGGAGGGGCGGCTGGCGGCTGCAAGGAGACTCTTaGGGTTCGGTAACTCCCCACCTTGTAGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: AWRGGWRLQGDS*GSVTPHLVGWP
Trigger: TGGCCAGCCTACAAGGTGGGGAGTTACCGAACCCAAAGAGTCTCCTTGCAGCCGCCAGCCGCCCCTCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp ACGCCGGGAGGAGTTGGAGAAGTTCTGGGGGTCACTTaGTTCTCCACTTGGACGCGCGCTGTGCGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: TPGGVGEVLGVT*FSTWTRAVRLR
Trigger: CCGCAGGCGCACAGCGCGCGTCCAAGTGGAGAACAAAGTGACCCCCAGAACTTCTCCAACTCCTCCCGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682666.1
CDS CAA 90 bp CAAGGGGAGTCGTACCAGGATGACTCAGAACTCAGGGAGCTGCCTTaGCTGGACCGCAGGCGAGAGTCCGTGGGAGAGGGGCGATGGCTG +
Preference number: 6 (lower is better)
Translates to: QGESYQDDSELRELP*LDRRRESVGEGRWL
Trigger: CAGCCATCGCCCCTCTCCCACGGACTCTCGCCTGCGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGTACGACTCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp CCCCTGCTCTGTTTCCACCCATGCCGGGAGCCTGCCTaGTCTAGAAAGGCACCGGGTTACCACAGACGTGGA +
Preference number: 6 (lower is better)
Translates to: PLLCFHPCREPA*SRKAPGYHRRG
Trigger: TCCACGTCTGTGGTAACCCGGTGCCTTTCTAGAGCAGGCAGGCTCCCGGCATGGGTGGAAACAGAGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275246.11
CDS CCA 72 bp ACCAGGATGACTCAGAACTCAGGGAGCTGCCTTTGCTaGACCGCAGGCGAGAGTCCGTGGGAGAGGGGCGAT +
Preference number: 6 (lower is better)
Translates to: TRMTQNSGSCLC*TAGESPWERGD
Trigger: ATCGCCCCTCTCCCACGGACTCTCGCCTGCGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp TCGTACCAGGATGACTCAGAACTCAGGGAGCTGCCTTaGCTGGACCGCAGGCGAGAGTCCGTGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: SYQDDSELRELP*LDRRRESVGEG
Trigger: CCCCTCTCCCACGGACTCTCGCCTGCGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGTACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp GGAAGGAGCCCTCAGCCTCGCTCAGCTCTCCAGCATTaGCCCAAGGGGAGTCGTACCAGGATGACTCAGAAC +
Preference number: 6 (lower is better)
Translates to: GRSPQPRSALQH*PKGSRTRMTQN
Trigger: GTTCTGAGTCATCCTGGTACGACTCCCCTTGGGGCAATGCTGGAGAGCTGAGCGAGGCTGAGGGCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AAAGGCGGATACCTGAGGGGGAGAGGCTCCCCAGGTTaGCATCTTTGTACAGTTCCCGGAGGGAGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: KGGYLRGRGSPG*HLCTVPGGRRG
Trigger: CCCTCTCCTCCCTCCGGGAACTGTACAAAGATGCCAACCTGGGGAGCCTCTCCCCCTCAGGTATCCGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp CCCGTCACTTTGCAGTATGATCTTTCGGCAGATCCCTaGCGGGAGATCCCTCTCCCTCCGCATGCCGACCCA +
Preference number: 6 (lower is better)
Translates to: PVTLQYDLSADP*REIPLPPHADP
Trigger: TGGGTCGGCATGCGGAGGGAGAGGGATCTCCCGCCAGGGATCTGCCGAAAGATCATACTGCAAAGTGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS CAA 72 bp GAAAGGCGGATACCTGAGGGGGAGAGGCTCCCCAGGTaGGCATCTTTGTACAGTTCCCGGAGGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ERRIPEGERLPR*ASLYSSRREER
Trigger: CCTCTCCTCCCTCCGGGAACTGTACAAAGATGCCAACCTGGGGAGCCTCTCCCCCTCAGGTATCCGCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp TCAAGCTTCCTTTCCTTCTGCACAGTGACCAGGGGCTaGAAGAAGAGCCACCCGGCCTTCCGGACCACCCCC +
Preference number: 6 (lower is better)
Translates to: SSFLSFCTVTRG*KKSHPAFRTTP
Trigger: GGGGGTGGTCCGGAAGGCCGGGTGGCTCTTCTTCAAGCCCCTGGTCACTGTGCAGAAGGAAAGGAAGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp GTGCCGCTGCTCAAGCTGCCCTCGTCAGAGTCCAGCAAGGTTCCCTaGCCAGTCTCACCGGTCCACTCGTTGCTGGAGGAATTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: VPLLKLPSSESSKVP*PVSPVHSLLEEFFR
Trigger: CCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGACTCTGACGAGGGCAGCTTGAGCAGCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS TCA 72 bp CTCTCCAGCATTGCCCCAAGGGGAGTCGTACCAGGATaGCTCAGAACTCAGGGAGCTGCCTTTGCTGGACCG +
Preference number: 6 (lower is better)
Translates to: LSSIAPRGVVPG*LRTQGAAFAGP
Trigger: CGGTCCAGCAAAGGCAGCTCCCTGAGTTCTGAGTCATCCTGGTACGACTCCCCTTGGGGCAATGCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp TCCTGTGCGTGGAGTAGGCAACACCTCTGGAGACCTTaGATGTGGGGCCACCGAGTCTCGATGCGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: SCAWSRQHLWRP*MWGHRVSMRKA
Trigger: AGCCTTACGCATCGAGACTCGGTGGCCCCACATGCAAGGTCTCCAGAGGTGTTGCCTACTCCACGCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp GCGTGGAGTAGGCAACACCTCTGGAGACCTTGCATGTaGGGCCACCGAGTCTCGATGCGTAAGGCTGGTTAC +
Preference number: 6 (lower is better)
Translates to: AWSRQHLWRPCM*GHRVSMRKAGY
Trigger: GTAACCAGCCTTACGCATCGAGACTCGGTGGCCCCACATGCAAGGTCTCCAGAGGTGTTGCCTACTCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp GGGCATTTGTCCTGTGCGTGGAGTAGGCAACACCTCTaGAGACCTTGCATGTGGGGCCACCGAGTCTCGATG +
Preference number: 6 (lower is better)
Translates to: GHLSCAWSRQHL*RPCMWGHRVSM
Trigger: CATCGAGACTCGGTGGCCCCACATGCAAGGTCTCCAGAGGTGTTGCCTACTCCACGCACAGGACAAATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CAA 72 bp TCGACCCTTAAACACCCATCCAGCTTCCCCAGCGTTTaGATGAGCACTCGGGGGCTCTTGCGGTCTTCGCCC +
Preference number: 6 (lower is better)
Translates to: STLKHPSSFPSV*MSTRGLLRSSP
Trigger: GGGCGAAGACCGCAAGAGCCCCCGAGTGCTCATCAAAACGCTGGGGAAGCTGGATGGGTGTTTAAGGGTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CAA 72 bp AGCTGCACCGGCTCACTGCAGTCCTCTGCAGGCACTTaGCTGGGGTTGCCACCATTGTGGAACTCGACCCTT +
Preference number: 6 (lower is better)
Translates to: SCTGSLQSSAGT*LGLPPLWNSTL
Trigger: AAGGGTCGAGTTCCACAATGGTGGCAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGCCGGTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp AGGAAGGAGCCCTCAGCCTCGCTCAGCTCTCCAGCATaGCCCCAAGGGGAGTCGTACCAGGATGACTCAGAA +
Preference number: 6 (lower is better)
Translates to: RKEPSASLSSPA*PQGESYQDDSE
Trigger: TTCTGAGTCATCCTGGTACGACTCCCCTTGGGGCAATGCTGGAGAGCTGAGCGAGGCTGAGGGCTCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp GGCTCACTGCAGTCCTCTGCAGGCACTTTGCTGGGGTTGCCACCATaGTGGAACTCGACCCTTAAACACCCATCCAGCTTCCCCAGCGTT +
Preference number: 6 (lower is better)
Translates to: GSLQSSAGTLLGLPP*WNSTLKHPSSFPSV
Trigger: AACGCTGGGGAAGCTGGATGGGTGTTTAAGGGTCGAGTTCCACAATGGTGGCAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CAA 90 bp AGCTGCACCGGCTCACTGCAGTCCTCTGCAGGCACTTTGCTGGGGTaGCCACCATTGTGGAACTCGACCCTTAAACACCCATCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SCTGSLQSSAGTLLG*PPLWNSTLKHPSSF
Trigger: GAAGCTGGATGGGTGTTTAAGGGTCGAGTTCCACAATGGTGGCAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGCCGGTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp GGGTTGCTTTTGTGTCCGGAGGCCGGGCAATCAGAGTaGGTCCGACGCTCTTCTCAGAAAACAGGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: GLLLCPEAGQSE*VRRSSQKTGPP
Trigger: TGGAGGCCCTGTTTTCTGAGAAGAGCGTCGGACTCACTCTGATTGCCCGGCCTCCGGACACAAAAGCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp CGCTGTTCGGTGAGCTGGTCCCGTCACTTTGCAGTATaGTCTTTCGGCAGATCCCTGGCGGGAGATCCCTCT +
Preference number: 6 (lower is better)
Translates to: RCSVSWSRHFAV*SFGRSLAGDPS
Trigger: AGAGGGATCTCCCGCCAGGGATCTGCCGAAAGATCATACTGCAAAGTGACGGGACCAGCTCACCGAACAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS GCA 72 bp ACTGCCACGCTGTTCGGTGAGCTGGTCCCGTCACTTTaGAGTATGATCTTTCGGCAGATCCCTGGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: TATLFGELVPSL*SMIFRQIPGGR
Trigger: TCTCCCGCCAGGGATCTGCCGAAAGATCATACTGCAAAGTGACGGGACCAGCTCACCGAACAGCGTGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS CCA 72 bp GCACCGGCTCACTGCAGTCCTCTGCAGGCACTTTGCTaGGGTTGCCACCATTGTGGAACTCGACCCTTAAAC +
Preference number: 6 (lower is better)
Translates to: APAHCSPLQALC*GCHHCGTRPLN
Trigger: GTTTAAGGGTCGAGTTCCACAATGGTGGCAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGCCGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 72 bp GTTTCCGATGCTAAGGTAGGTGAGTACCTCAGCAGCTaGACCGGCTCACTGCAGTCCTCTGCAGGCACTTTG +
Preference number: 6 (lower is better)
Translates to: VSDAKVGEYLSS*TGSLQSSAGTL
Trigger: CAAAGTGCCTGCAGAGGACTGCAGTGAGCCGGTGCAGCTGCTGAGGTACTCACCTACCTTAGCATCGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AGAGCTTTGGTTGAAAGGCTTTTTGGCATCGCCAGGTaGGAAGCTGGCATGGAGACTGGGGTCAGGCATGCC +
Preference number: 6 (lower is better)
Translates to: RALVERLFGIAR*EAGMETGVRHA
Trigger: GGCATGCCTGACCCCAGTCTCCATGCCAGCTTCCCACCTGGCGATGCCAAAAAGCCTTTCAACCAAAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AGTTGGGACTGGTTAGGAGGGGGCAGCAGACTCTTCTaGTCCCTGGAGAACAGGTCACTGTCTGACCAGGAT +
Preference number: 6 (lower is better)
Translates to: SWDWLGGGSRLF*SLENRSLSDQD
Trigger: ATCCTGGTCAGACAGTGACCTGTTCTCCAGGGACCAGAAGAGTCTGCTGCCCCCTCCTAACCAGTCCCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000543712.5
ENST00000682666.1
CDS CAA 90 bp TATTCATCAGAAAGGCGGATACCTGAGGGGGAGAGGCTCCCCAGGTaGGCATCTTTGTACAGTTCCCGGAGGGAGGAGAGGGAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: YSSERRIPEGERLPR*ASLYSSRREEREEL
Trigger: AAGCTCTTCCCTCTCCTCCCTCCGGGAACTGTACAAAGATGCCAACCTGGGGAGCCTCTCCCCCTCAGGTATCCGCCTTTCTGATGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp GCCACTCTGGAGGGCACATCAATGTCGGAAGCAAAAGAGACACGGTaGCTCAGGCTGGCATGCGTGCCCATGTATTCATCAGAAAGGCGG +
Preference number: 6 (lower is better)
Translates to: ATLEGTSMSEAKETR*LRLACVPMYSSERR
Trigger: CCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTGATGTGCCCTCCAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp CTTGAGAGGCTTCCCGTCCAGTCACTGATCCGTCGCATCCTGGCTTaGAGGGAGTCCTTCTTCGCAGTATCCTCAACAAAGGCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: LERLPVQSLIRRILA*RESFFAVSSTKALG
Trigger: GCCCAAAGCCTTTGTTGAGGATACTGCGAAGAAGGACTCCCTCAAAGCCAGGATGCGACGGATCAGTGACTGGACGGGAAGCCTCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp ACTGACTGTCAAGGGACTGGTGACGGATCTGCGCCTTaGGCAAAGTTCCTCTGTCCCTCTTGGTGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: TDCQGTGDGSAP*AKFLCPSWCCW
Trigger: CCAACAGCACCAAGAGGGACAGAGGAACTTTGCTCAAGGCGCAGATCCGTCACCAGTCCCTTGACAGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp CTTGGACCTCGGCTCCTGGAGTTTCCTTTTCTTCCTTaGGAGGCTTCCCGTCCAGTCACTGATCCGTCGCAT +
Preference number: 6 (lower is better)
Translates to: LGPRLLEFPFLP*EASRPVTDPSH
Trigger: ATGCGACGGATCAGTGACTGGACGGGAAGCCTCTCAAGGAAGAAAAGGAAACTCCAGGAGCCGAGGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp GTGTCCGTTGCAGTCTCTGGAGGTGATGTGGTTATCTaGCAGCTCGTGGCCAACAGAGTGGAAGCCATTCTC +
Preference number: 6 (lower is better)
Translates to: VSVAVSGGDVVI*QLVANRVEAIL
Trigger: GAGAATGGCTTCCACTCTGTTGGCCACGAGCTGGCAGATAACCACATCACCTCCAGAGACTGCAACGGACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 72 bp GCTCACTGCAGTCCTCTGCAGGCACTTTGCTGGGGTTaGCACCATTGTGGAACTCGACCCTTAAACACCCAT +
Preference number: 6 (lower is better)
Translates to: AHCSPLQALCWG*HHCGTRPLNTH
Trigger: ATGGGTGTTTAAGGGTCGAGTTCCACAATGGTGGCAACCCCAGCAAAGTGCCTGCAGAGGACTGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 72 bp GAGAGTGAAGGAACTGTACTGGATGGGGTCCCCGTGTaGCACTCTGGAGGGCACATCAATGTCGGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: ESEGTVLDGVPV*HSGGHINVGSK
Trigger: TTTGCTTCCGACATTGATGTGCCCTCCAGAGTGGCACACGGGGACCCCATCCAGTACAGTTCCTTCACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp GGGATGCTCTGGAACAGACTGCACTATGCTGTCTTCTaGAAACAGAGCACACCGAGGGGCACTGCTCTGATC +
Preference number: 6 (lower is better)
Translates to: GMLWNRLHYAVF*KQSTPRGTALI
Trigger: GATCAGAGCAGTGCCCCTCGGTGTGCTCTGTTTGCAGAAGACAGCATAGTGCAGTCTGTTCCAGAGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp GATGAGATTGTCGGCAAAATCTGCCAAGCCGGGGTGTaGGTATTTCCCGGGAGAAGTGCTCTTGGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: DEIVGKICQAGV*VFPGRSALGVL
Trigger: CAGGACTCCAAGAGCACTTCTCCCGGGAAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp GTTGGCATCTTTGTACAGTTCCCGGAGGGAGGAGAGGGAAGAGCTTaGGTTGAAAGGCTTTTTGGCATCGCCAGGTGGGAAGCTGGCATG +
Preference number: 6 (lower is better)
Translates to: VGIFVQFPEGGEGRA*VERLFGIARWEAGM
Trigger: CATGCCAGCTTCCCACCTGGCGATGCCAAAAAGCCTTTCAACCAAAGCTCTTCCCTCTCCTCCCTCCGGGAACTGTACAAAGATGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp CTGGCTTTGAGGGAGTCCTTCTTCGCAGTATCCTCAACAAAGGCTTaGGGCTTCCGACAGGGGAGAGTGAAGGAACTGTACTGGATGGGG +
Preference number: 6 (lower is better)
Translates to: LALRESFFAVSSTKA*GFRQGRVKELYWMG
Trigger: CCCCATCCAGTACAGTTCCTTCACTCTCCCCTGTCGGAAGCCCAAAGCCTTTGTTGAGGATACTGCGAAGAAGGACTCCCTCAAAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp CAGCTCGTGGCCAACAGAGTGGAAGCCATTCTCAGTTaGGAAAGCAGCACTGATGCCCTGGAAATCCTTCCC +
Preference number: 6 (lower is better)
Translates to: QLVANRVEAILS*ESSTDALEILP
Trigger: GGGAAGGATTTCCAGGGCATCAGTGCTGCTTTCTCAACTGAGAATGGCTTCCACTCTGTTGGCCACGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS TCA 72 bp CTCAAAGAGCAGATCCAGCTGTTCCAGAGAGCTGAGTaGCTCGCTGCTGGACTCGGCGGTTTCTGTAGATGT +
Preference number: 6 (lower is better)
Translates to: LKEQIQLFQRAE*LAAGLGGFCRC
Trigger: ACATCTACAGAAACCGCCGAGTCCAGCAGCGAGTCACTCAGCTCTCTGGAACAGCTGGATCTGCTCTTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp GCCGTTGGCCTGACTGTCGTTAAAACTCCTGCACAGTaGAGTGATCTGCTCAGCACTCCTGAATGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: AVGLTVVKTPAQ*SDLLSTPECLL
Trigger: GAGCAGACATTCAGGAGTGCTGAGCAGATCACTGCACTGTGCAGGAGTTTTAACGACAGTCAGGCCAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AAGCGCGGAGATGGGGATCAACCAGCGGAATTTAAATaGGTCCAAGTCAGTAGAGTTGTGTGCAGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: KRGDGDQPAEFK*VQVSRVVCRPG
Trigger: TCCCGGCCTGCACACAACTCTACTGACTTGGACCCATTTAAATTCCGCTGGTTGATCCCCATCTCCGCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp TTGAGAAGGTGTCCGTTGCAGTCTCTGGAGGTGATGTaGTTATCTGCCAGCTCGTGGCCAACAGAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LRRCPLQSLEVM*LSASSWPTEWK
Trigger: CTTCCACTCTGTTGGCCACGAGCTGGCAGATAACCACATCACCTCCAGAGACTGCAACGGACACCTTCTCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp TCTTGCCTGCCTAAGGGGGACACAGAAGGGAGAGTCTaGGACCGAAGAGCAAGAATTCCATGTGGACTTGGA +
Preference number: 6 (lower is better)
Translates to: SCLPKGDTEGRV*DRRARIPCGLG
Trigger: TCCAAGTCCACATGGAATTCTTGCTCTTCGGTCCCAGACTCTCCCTTCTGTGTCCCCCTTAGGCAGGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449545.2
CDS CAA 72 bp CTTCCCGTCCAGTCACTGATCCGTCGCATCCTGGCTTaGAGGGAGTCCTTCTTCGCAGTATCCTCAACAAAG +
Preference number: 6 (lower is better)
Translates to: LPVQSLIRRILA*RESFFAVSSTK
Trigger: CTTTGTTGAGGATACTGCGAAGAAGGACTCCCTCAAAGCCAGGATGCGACGGATCAGTGACTGGACGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp TTCACCCCAGTAACAATATGGTCCCGTGGAAGCACCTaGAAGAACTGGATGGCTGCACTCCAGCCACAGAGC +
Preference number: 6 (lower is better)
Translates to: FTPVTIWSRGST*KNWMAALQPQS
Trigger: GCTCTGTGGCTGGAGTGCAGCCATCCAGTTCTTCAAGGTGCTTCCACGGGACCATATTGTTACTGGGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS TCA 72 bp CAGAGTGGAAGCCATTCTCAGTTGAGAAAGCAGCACTaGTGCCCTGGAAATCCTTCCCTGGGGCATTTGTCC +
Preference number: 6 (lower is better)
Translates to: QSGSHSQLRKQH*CPGNPSLGHLS
Trigger: GGACAAATGCCCCAGGGAAGGATTTCCAGGGCATCAGTGCTGCTTTCTCAACTGAGAATGGCTTCCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 72 bp GCAAGGTTCCCTTGCCAGTCTCACCGGTCCACTCGTTaGTGGAGGAATTCTTCAGGACTTTTAAAGACCTGG +
Preference number: 6 (lower is better)
Translates to: ARFPCQSHRSTR*WRNSSGLLKTW
Trigger: CCAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS GCA 72 bp TCTGGAGACCTTGCATGTGGGGCCACCGAGTCTCGATaGGTAAGGCTGGTTACTCTTAAAGTGAGAAAGGCA +
Preference number: 6 (lower is better)
Translates to: SGDLACGATESR*VRLVTLKVRKA
Trigger: TGCCTTTCTCACTTTAAGAGTAACCAGCCTTACGCATCGAGACTCGGTGGCCCCACATGCAAGGTCTCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS GCA 72 bp AAGCAAAAGAGACACGGTTGCTCAGGCTGGCATGCGTaGCCATGTATTCATCAGAAAGGCGGATACCTGAGG +
Preference number: 6 (lower is better)
Translates to: KQKRHGCSGWHA*PCIHQKGGYLR
Trigger: CCTCAGGTATCCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp TCGGAAGCAAAAGAGACACGGTTGCTCAGGCTGGCATaGGTGCCCATGTATTCATCAGAAAGGCGGATACCT +
Preference number: 6 (lower is better)
Translates to: SEAKETRLLRLA*VPMYSSERRIP
Trigger: AGGTATCCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp AGGGCACATCAATGTCGGAAGCAAAAGAGACACGGTTaGTCAGGCTGGCATGCGTGCCCATGTATTCATCAG +
Preference number: 6 (lower is better)
Translates to: RAHQCRKQKRHG*SGWHACPCIHQ
Trigger: CTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTGATGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AAGCCATTCTCAGTTGAGAAAGCAGCACTGATGCCCTaGAAATCCTTCCCTGGGGCATTTGTCCTGTGCGTG +
Preference number: 6 (lower is better)
Translates to: KPFSVEKAALMP*KSFPGAFVLCV
Trigger: CACGCACAGGACAAATGCCCCAGGGAAGGATTTCCAGGGCATCAGTGCTGCTTTCTCAACTGAGAATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp CAATGTCGGAAGCAAAAGAGACACGGTTGCTCAGGCTaGCATGCGTGCCCATGTATTCATCAGAAAGGCGGA +
Preference number: 6 (lower is better)
Translates to: QCRKQKRHGCSG*HACPCIHQKGG
Trigger: TCCGCCTTTCTGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp TTAAAGTTATCCAGGAATTCCTCCAGCAGTTGGGACTaGTTAGGAGGGGGCAGCAGACTCTTCTGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: LKLSRNSSSSWD*LGGGSRLFWSL
Trigger: CAGGGACCAGAAGAGTCTGCTGCCCCCTCCTAACCAGTCCCAACTGCTGGAGGAATTCCTGGATAACTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000543712.5
ENST00000682666.1
CDS CAA 72 bp GAGGGCACATCAATGTCGGAAGCAAAAGAGACACGGTaGCTCAGGCTGGCATGCGTGCCCATGTATTCATCA +
Preference number: 6 (lower is better)
Translates to: EGTSMSEAKETR*LRLACVPMYSS
Trigger: TGATGAATACATGGGCACGCATGCCAGCCTGAGCAACCGTGTCTCTTTTGCTTCCGACATTGATGTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp AGGGAGTCCTTCTTCGCAGTATCCTCAACAAAGGCTTaGGGCTTCCGACAGGGGAGAGTGAAGGAACTGTAC +
Preference number: 6 (lower is better)
Translates to: RESFFAVSSTKA*GFRQGRVKELY
Trigger: GTACAGTTCCTTCACTCTCCCCTGTCGGAAGCCCAAAGCCTTTGTTGAGGATACTGCGAAGAAGGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp ATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCCTCGGGTCGCGCGCC +
Preference number: 6 (lower is better)
Translates to: IHSSRMSWLKVS*SFIHRALGSRA
Trigger: GGCGCGCGACCCGAGGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682666.1
CDS CAA 90 bp ATGGGGATCAACCAGCGGAATTTAAATGGGTCCAAGTCAGTAGAGTaGTGTGCAGGCCGGGAATTCGAGGGCTGTAACATGAAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: MGINQRNLNGSKSVE*CAGREFEGCNMKAH
Trigger: GTGGGCCTTCATGTTACAGCCCTCGAATTCCCGGCCTGCACACAACTCTACTGACTTGGACCCATTTAAATTCCGCTGGTTGATCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537845.1
CDS CAA 90 bp TCAGAGTCCAGCAAGGTTCCCTTGCCAGTCTCACCGGTCCACTCGTaGCTGGAGGAATTCTTCAGGACTTTTAAAGACCTGGATGAAGCT +
Preference number: 6 (lower is better)
Translates to: SESSKVPLPVSPVHS*LEEFFRTFKDLDEA
Trigger: AGCTTCATCCAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCTGGACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CAA 90 bp TGGTCATCATCTTCATCGCTCAGGATGTCACTCTCTTTGATGAGATaGTCGGCAAAATCTGCCAAGCCGGGGTGTGGGTATTTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: WSSSSSLRMSLSLMR*SAKSAKPGCGYFPG
Trigger: TCCCGGGAAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGATGAAGATGATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp TCGATGTCTTTAGTAGGGCTGCCCTGCTTCACAGTCTaGCGGTGGTCATCATCTTCATCGCTCAGGATGTCA +
Preference number: 6 (lower is better)
Translates to: SMSLVGLPCFTV*RWSSSSSLRMS
Trigger: TGACATCCTGAGCGATGAAGATGATGACCACCGTCAGACTGTGAAGCAGGGCAGCCCTACTAAAGACATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp ACGTCTGGGTCCTCGGAAATCCTCAGTCTCTGGAACTaGATTTCGATGTCTTTAGTAGGGCTGCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: TSGSSEILSLWN*ISMSLVGLPCF
Trigger: GAAGCAGGGCAGCCCTACTAAAGACATCGAAATTCAGTTCCAGAGACTGAGGATTTCCGAGGACCCAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp GGAAGAACGTCGCTTATAAATATCCGGCTGAGATGCTaGCGCTCATCCACCTGCGCTGTAACTGCAAACCCA +
Preference number: 6 (lower is better)
Translates to: GRTSLINIRLRC*RSSTCAVTANP
Trigger: TGGGTTTGCAGTTACAGCGCAGGTGGATGAGCGTCAGCATCTCAGCCGGATATTTATAAGCGACGTTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp GATGTCACTCTCTTTGATGAGATTGTCGGCAAAATCTaGCAAGCCGGGGTGTGGGTATTTCCCGGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: DVTLFDEIVGKI*QAGVWVFPGRS
Trigger: ACTTCTCCCGGGAAATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp TGCTGTCTTCTGCAAACAGAGCACACCGAGGGGCACTaGTCTGATCCATGGAATTCTTCCCATAGGTCTCAT +
Preference number: 6 (lower is better)
Translates to: CCLLQTEHTEGH*SDPWNSSHRSH
Trigger: ATGAGACCTATGGGAAGAATTCCATGGATCAGAGCAGTGCCCCTCGGTGTGCTCTGTTTGCAGAAGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp TTTCTTTCTTGGGATGCTCTGGAACAGACTGCACTATaGTGTCTTCTGCAAACAGAGCACACCGAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: FLSWDALEQTAL*CLLQTEHTEGH
Trigger: GTGCCCCTCGGTGTGCTCTGTTTGCAGAAGACAGCATAGTGCAGTCTGTTCCAGAGCATCCCAAGAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp AGGTTCCCTTGCCAGTCTCACCGGTCCACTCGTTGCTaGAGGAATTCTTCAGGACTTTTAAAGACCTGGATG +
Preference number: 6 (lower is better)
Translates to: RFPCQSHRSTRC*RNSSGLLKTWM
Trigger: CATCCAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp GTGATGTGGTTATCTGCCAGCTCGTGGCCAACAGAGTaGAAGCCATTCTCAGTTGAGAAAGCAGCACTGATG +
Preference number: 6 (lower is better)
Translates to: VMWLSASSWPTE*KPFSVEKAALM
Trigger: CATCAGTGCTGCTTTCTCAACTGAGAATGGCTTCCACTCTGTTGGCCACGAGCTGGCAGATAACCACATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp CAGTCTCTGGAGGTGATGTGGTTATCTGCCAGCTCGTaGCCAACAGAGTGGAAGCCATTCTCAGTTGAGAAA +
Preference number: 6 (lower is better)
Translates to: QSLEVMWLSASS*PTEWKPFSVEK
Trigger: TTTCTCAACTGAGAATGGCTTCCACTCTGTTGGCCACGAGCTGGCAGATAACCACATCACCTCCAGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000535583.1
ENST00000682666.1
CDS CCA 72 bp CAAACAGAGCACACCGAGGGGCACTGCTCTGATCCATaGAATTCTTCCCATAGGTCTCATAAAACAGCAGCG +
Preference number: 6 (lower is better)
Translates to: QTEHTEGHCSDP*NSSHRSHKTAA
Trigger: CGCTGCTGTTTTATGAGACCTATGGGAAGAATTCCATGGATCAGAGCAGTGCCCCTCGGTGTGCTCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp AGCAAGGTTCCCTTGCCAGTCTCACCGGTCCACTCGTaGCTGGAGGAATTCTTCAGGACTTTTAAAGACCTG +
Preference number: 6 (lower is better)
Translates to: SKVPLPVSPVHS*LEEFFRTFKDL
Trigger: CAGGTCTTTAAAAGTCCTGAAGAATTCCTCCAGCAACGAGTGGACCGGTGAGACTGGCAAGGGAACCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS TCA 72 bp TTGCAAAAAGGGATGCACAAGCAGAGTGTACAGCAGTaGCCCAGTTTTCTAGATCTGTCTGGCTGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LQKGMHKQSVQQ*PSFLDLSGWWP
Trigger: AGGCCACCAGCCAGACAGATCTAGAAAACTGGGTCACTGCTGTACACTCTGCTTGTGCATCCCTTTTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp CCCCACCTTGTAGGCTGGCCAGATAGCAGCGCATCCTaGACAGATCCATGTGAAATTTCTCAAGATTCTGCT +
Preference number: 6 (lower is better)
Translates to: PHLVGWPDSSAS*TDPCEISQDSA
Trigger: AGCAGAATCTTGAGAAATTTCACATGGATCTGTTCAGGATGCGCTGCTATCTGGCCAGCCTACAAGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp GGTCAAGATCAGACACAGCTTCCCCATTTAAGGTCATaGTCTCATTGCCCTTTCTCAGCCCTTCCCCATACG +
Preference number: 6 (lower is better)
Translates to: GQDQTQLPHLRS*SHCPFSALPHT
Trigger: CGTATGGGGAAGGGCTGAGAAAGGGCAATGAGATCATGACCTTAAATGGGGAAGCTGTGTCTGATCTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp GGGTACCTGCTGTTGGTAATAACAGGACAGGGAGGCTaGAGTGAAACACTCGAAGACTGTACAGAATCCTGG +
Preference number: 6 (lower is better)
Translates to: GYLLLVITGQGG*SETLEDCTESW
Trigger: CCAGGATTCTGTACAGTCTTCGAGTGTTTCACTTCAGCCTCCCTGTCCTGTTATTACCAACAGCAGGTACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS TCA 72 bp TGGGAGCAACACAGCACATTTAACAAGCACGCAAAGTaGGTCCATGAAGTGAGCCCACAGAGGAATGTGGAG +
Preference number: 6 (lower is better)
Translates to: WEQHSTFNKHAK*VHEVSPQRNVE
Trigger: CTCCACATTCCTCTGTGGGCTCACTTCATGGACTCACTTTGCGTGCTTGTTAAATGTGCTGTGTTGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000461783.7
ENST00000528535.5
ENST00000535231.5
ENST00000538270.5
ENST00000682666.1
CDS TCA 72 bp TGCTGCCTCTTGACTGTTTCAGAGTCATTCTGCTCCTaGGTGTCCAACATCTCCAATCATCCTCAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: CCLLTVSESFCS*VSNISNHPQCP
Trigger: GGGACACTGAGGATGATTGGAGATGTTGGACACTCAGGAGCAGAATGACTCTGAAACAGTCAAGAGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS GCA 72 bp AGTCCGACGCTCTTCTCAGAAAACAGGGCCTCCATCTaGTTAAGGTCAAGATCAGACACAGCTTCCCCATTT +
Preference number: 6 (lower is better)
Translates to: SPTLFSENRASI*LRSRSDTASPF
Trigger: AAATGGGGAAGCTGTGTCTGATCTTGACCTTAAGCAGATGGAGGCCCTGTTTTCTGAGAAGAGCGTCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp CCCAAACCAGGACATCAGTCAGAAGAACTAGGGTTCTaGTGCTCCTCCTGCACCGAAATAGAATGCCTGAAT +
Preference number: 6 (lower is better)
Translates to: PKPGHQSEELGF*CSSCTEIECLN
Trigger: ATTCAGGCATTCTATTTCGGTGCAGGAGGAGCAGCAGAACCCTAGTTCTTCTGACTGATGTCCTGGTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS CCA 72 bp TCTTGCTGTCCATGTCTATCTTCTGAAGCAGGTTTTTaGTCTGGTTCTTCAGCAGCCGCAGCGTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: SCCPCLSSEAGF*SGSSAAAACPL
Trigger: AAGAGGACACGCTGCGGCTGCTGAAGAACCAGACCAAAAACCTGCTTCAGAAGATAGACATGGACAGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp GTAACAATATGGTCCCGTGGAAGCACCTTGAAGAACTaGATGGCTGCACTCCAGCCACAGAGCCATAAAGAT +
Preference number: 6 (lower is better)
Translates to: VTIWSRGSTLKN*MAALQPQSHKD
Trigger: ATCTTTATGGCTCTGTGGCTGGAGTGCAGCCATCCAGTTCTTCAAGGTGCTTCCACGGGACCATATTGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS CAA 72 bp TCTTCATCGCTCAGGATGTCACTCTCTTTGATGAGATaGTCGGCAAAATCTGCCAAGCCGGGGTGTGGGTAT +
Preference number: 6 (lower is better)
Translates to: SSSLRMSLSLMR*SAKSAKPGCGY
Trigger: ATACCCACACCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp TGGTCATCATCTTCATCGCTCAGGATGTCACTCTCTTaGATGAGATTGTCGGCAAAATCTGCCAAGCCGGGG +
Preference number: 6 (lower is better)
Translates to: WSSSSSLRMSLS*MRLSAKSAKPG
Trigger: CCCCGGCTTGGCAGATTTTGCCGACAATCTCATCAAAGAGAGTGACATCCTGAGCGATGAAGATGATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp ATTGGCTGTATTCTTTTTAAAGTTATCCAGGAATTCCTCCAGCAGTaGGGACTGGTTAGGAGGGGGCAGCAGACTCTTCTGGTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: IGCILFKVIQEFLQQ*GLVRRGQQTLLVPG
Trigger: TCCAGGGACCAGAAGAGTCTGCTGCCCCCTCCTAACCAGTCCCAACTGCTGGAGGAATTCCTGGATAACTTTAAAAAGAATACAGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000543712.5
ENST00000682666.1
CDS CAA 90 bp CCTCTCCCAGGGTCTTCTGCGGTCATCAAAATCTCTGTGAACTTCTaGTCCAAATCCTCGGTTCCAAGGACCACTTCTAGGATCAAATCG +
Preference number: 6 (lower is better)
Translates to: PLPGSSAVIKISVNF*SKSSVPRTTSRIKS
Trigger: CGATTTGATCCTAGAAGTGGTCCTTGGAACCGAGGATTTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCCTGGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 90 bp CAAAGGTTATTCACCCCAGTAACAATATGGTCCCGTGGAAGCACCTaGAAGAACTGGATGGCTGCACTCCAGCCACAGAGCCATAAAGAT +
Preference number: 6 (lower is better)
Translates to: QRLFTPVTIWSRGST*KNWMAALQPQSHKD
Trigger: ATCTTTATGGCTCTGTGGCTGGAGTGCAGCCATCCAGTTCTTCAAGGTGCTTCCACGGGACCATATTGTTACTGGGGTGAATAACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS TCA 72 bp TCTCAGTGTTGGTCCTGCTCATTTCCAACTCTCGCATaGAATTCTCATAAATGTTCTGCCGGAGGGGATCGC +
Preference number: 6 (lower is better)
Translates to: SQCWSCSFPTLA*NSHKCSAGGDR
Trigger: GCGATCCCCTCCGGCAGAACATTTATGAGAATTTCATGCGAGAGTTGGAAATGAGCAGGACCAACACTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp TGCTTGCAACCTCTGGATTCAATCAGAAACAATGCCTaGGAGTACAGAGCCTTCTCAATAGGTAACGGCGGG +
Preference number: 6 (lower is better)
Translates to: CLQPLDSIRNNA*EYRAFSIGNGG
Trigger: CCCGCCGTTACCTATTGAGAAGGCTCTGTACTCTCAGGCATTGTTTCTGATTGAATCCAGAGGTTGCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS GCA 72 bp GCCGTTGGCCTGACTGTCGTTAAAACTCCTGCACAGTaGAGTGATCTGCTCAGCACTATGCTGTACATAAAA +
Preference number: 6 (lower is better)
Translates to: AVGLTVVKTPAQ*SDLLSTMLYIK
Trigger: TTTTATGTACAGCATAGTGCTGAGCAGATCACTGCACTGTGCAGGAGTTTTAACGACAGTCAGGCCAACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275246.11
ENST00000546145.1
CDS GCA 72 bp TTTCAGCGTTACCCAGTACTGTTTCCATTTCCTTCGTaGCACCAGCTCAAGCTTCCTTTCCTTCTGCACAGT +
Preference number: 6 (lower is better)
Translates to: FQRYPVLFPFPS*HQLKLPFLLHS
Trigger: ACTGTGCAGAAGGAAAGGAAGCTTGAGCTGGTGGCACGAAGGAAATGGAAACAGTACTGGGTAACGCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp CATCAGTCAGAAGAACTAGGGTTCTGCTGCTCCTCCTaGACCGAAATAGAATGCCTGAATGTCTGCTCCATT +
Preference number: 6 (lower is better)
Translates to: HQSEELGFCCSS*TEIECLNVCSI
Trigger: AATGGAGCAGACATTCAGGCATTCTATTTCGGTGCAGGAGGAGCAGCAGAACCCTAGTTCTTCTGACTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS GCA 72 bp AAACCAGGACATCAGTCAGAAGAACTAGGGTTCTGCTaGTCCTCCTGCACCGAAATAGAATGCCTGAATGTC +
Preference number: 6 (lower is better)
Translates to: KPGHQSEELGFC*SSCTEIECLNV
Trigger: GACATTCAGGCATTCTATTTCGGTGCAGGAGGAGCAGCAGAACCCTAGTTCTTCTGACTGATGTCCTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS CCA 72 bp TTCTTTTTAAAGTTATCCAGGAATTCCTCCAGCAGTTaGGACTGGTTAGGAGGGGGCAGCAGACTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: FFLKLSRNSSSS*DWLGGGSRLFW
Trigger: CCAGAAGAGTCTGCTGCCCCCTCCTAACCAGTCCCAACTGCTGGAGGAATTCCTGGATAACTTTAAAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000543712.5
ENST00000682666.1
CDS CCA 72 bp CTCATCAAAATCTCCTCTATGCCCCCAGGGCTTCTCTaGATTAAAGCCAAAGTGGTCTCTTCGACCAAGATG +
Preference number: 6 (lower is better)
Translates to: LIKISSMPPGLL*IKAKVVSSTKM
Trigger: CATCTTGGTCGAAGAGACCACTTTGGCTTTAATCCAGAGAAGCCCTGGGGGCATAGAGGAGATTTTGATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CCA 72 bp TCAAAGGTTATTCACCCCAGTAACAATATGGTCCCGTaGAAGCACCTTGAAGAACTGGATGGCTGCACTCCA +
Preference number: 6 (lower is better)
Translates to: SKVIHPSNNMVP*KHLEELDGCTP
Trigger: TGGAGTGCAGCCATCCAGTTCTTCAAGGTGCTTCCACGGGACCATATTGTTACTGGGGTGAATAACCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS CAA 72 bp CAGACCGAAATCTACCTCTTTCTTCATGTAAGCCTTTaGGACCACCATAGACCGGTAGAACCCGATGCTCTC +
Preference number: 6 (lower is better)
Translates to: QTEIYLFLHVSL*DHHRPVEPDAL
Trigger: GAGAGCATCGGGTTCTACCGGTCTATGGTGGTCCAAAAGGCTTACATGAAGAAAGAGGTAGATTTCGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 72 bp GGGTCTTCTGCGGTCATCAAAATCTCTGTGAACTTCTaGTCCAAATCCTCGGTTCCAAGGACCACTTCTAGG +
Preference number: 6 (lower is better)
Translates to: GSSAVIKISVNF*SKSSVPRTTSR
Trigger: CCTAGAAGTGGTCCTTGGAACCGAGGATTTGGACAAGAAGTTCACAGAGATTTTGATGACCGCAGAAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 90 bp ATGGGGATCAACCAGCGGAATTTAAATGGGTCCAAGTCAGTAGAGTaGTGTGCAGGCCGGGAATTCGAGGGCAATTTCTTTTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: MGINQRNLNGSKSVE*CAGREFEGNFFFSL
Trigger: CAAACTGAAAAAGAAATTGCCCTCGAATTCCCGGCCTGCACACAACTCTACTGACTTGGACCCATTTAAATTCCGCTGGTTGATCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp TGTCCTTTCCATCACTGGTACTGGATGAGCTACAGATGGAGTCTGTaGCCACTGATATTCCAATCAAATCTGGTCCTGGGAAGTGGGTAT +
Preference number: 6 (lower is better)
Translates to: CPFHHWYWMSYRWSL*PLIFQSNLVLGSGY
Trigger: ATACCCACTTCCCAGGACCAGATTTGATTGGAATATCAGTGGCAACAGACTCCATCTGTAGCTCATCCAGTACCAGTGATGGAAAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS CAA 90 bp TCCAACTGTTCCTCTGTCGAAAGCATCCACTTAGTTTCTAATTCTTaGCCATCAGCACTTAGGAAAGACCCTGTAAGTGCTCCTCCACGG +
Preference number: 6 (lower is better)
Translates to: SNCSSVESIHLVSNS*PSALRKDPVSAPPR
Trigger: CCGTGGAGGAGCACTTACAGGGTCTTTCCTAAGTGCTGATGGCAAAGAATTAGAAACTAAGTGGATGCTTTCGACAGAGGAACAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535231.5
CDS TCA 72 bp TCCAGGTCAAGTGCAGAAATCCAAGGCATGGACGTGTaGCATCTTATCCAACTGTTCCTCTGTCGAAAGCAT +
Preference number: 6 (lower is better)
Translates to: SRSSAEIQGMDV*HLIQLFLCRKH
Trigger: ATGCTTTCGACAGAGGAACAGTTGGATAAGATGTCACACGTCCATGCCTTGGATTTCTGCACTTGACCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535231.5
CDS GCA 72 bp TCTCGGGGAACACCGTCTACTGTTGAACCATATATATaGAGAAGTTCATCGACCTCACTGGAGTTACTGGAG +
Preference number: 6 (lower is better)
Translates to: SRGTPSTVEPYI*RSSSTSLELLE
Trigger: CTCCAGTAACTCCAGTGAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360366.8
ENST00000528391.6
CDS GCA 72 bp CTCATTTATTTCTACAAGGCCTGGGACACAGGAAGCTaGCAGGACTTCATTCATCATCATCTTGCCTGCCTA +
Preference number: 6 (lower is better)
Translates to: LIYFYKAWDTGS*QDFIHHHLACL
Trigger: TAGGCAGGCAAGATGATGATGAATGAAGTCCTGGCAGCTTCCTGTGTCCCAGGCCTTGTAGAAATAAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449545.2
CDS GCA 72 bp ATCTCCAATCATCCTCAGTGTCCCCATGCTGCCATCTaGTTAAACTTAACCCAGGTAGCTGAAGACGAAAGA +
Preference number: 6 (lower is better)
Translates to: ISNHPQCPHAAI*LNLTQVAEDER
Trigger: TCTTTCGTCTTCAGCTACCTGGGTTAAGTTTAAGCAGATGGCAGCATGGGGACACTGAGGATGATTGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS GCA 72 bp GGAGAATTCAAGAAGATTTGGAAGAAGCTCCAGGCTTaGTGCCTCTTGACTGTTTCAGAGTCATTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GEFKKIWKKLQA*CLLTVSESFCS
Trigger: GGAGCAGAATGACTCTGAAACAGTCAAGAGGCAGCAAGCCTGGAGCTTCTTCCAAATCTTCTTGAATTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS CAA 72 bp ATTCTTTTTAAAGTTATCCAGGAATTCCTCCAGCAGTaGGGACTGGTTAGGAGGGGGCAGCAGACTCTTCTG +
Preference number: 6 (lower is better)
Translates to: ILFKVIQEFLQQ*GLVRRGQQTLL
Trigger: CAGAAGAGTCTGCTGCCCCCTCCTAACCAGTCCCAACTGCTGGAGGAATTCCTGGATAACTTTAAAAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000543712.5
ENST00000682666.1
CDS CAA 72 bp CATCACTGGTACTGGATGAGCTACAGATGGAGTCTGTaGCCACTGATATTCCAATCAAATCTGGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: HHWYWMSYRWSL*PLIFQSNLVLG
Trigger: TCCCAGGACCAGATTTGATTGGAATATCAGTGGCAACAGACTCCATCTGTAGCTCATCCAGTACCAGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS CAA 90 bp AAGTCTGGATTTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTaGAACCATATATATGCAGAAGTTCATCGACCTCACTGGAGTTAC +
Preference number: 6 (lower is better)
Translates to: KSGFPMHCLGEHRLL*NHIYAEVHRPHWSY
Trigger: GTAACTCCAGTGAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAAATCCAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360366.8
ENST00000528391.6
CDS CAA 90 bp GATAGTTTCCAGACCGAAATCTACCTCTTTCTTCATGTAAGCCTTTaGGACCACCATAGACCGGTAGAACCCGATGCTCTCTCTCATCAA +
Preference number: 6 (lower is better)
Translates to: DSFQTEIYLFLHVSL*DHHRPVEPDALSHQ
Trigger: TTGATGAGAGAGAGCATCGGGTTCTACCGGTCTATGGTGGTCCAAAAGGCTTACATGAAGAAAGAGGTAGATTTCGGTCTGGAAACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 90 bp GAGTTTCAAAGGAGAATTCAAGAAGATTTGGAAGAAGCTCCAGGCTaGCTGCCTCTTGACTGTTTCAGAGTCATTCTGCTCCTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: EFQRRIQEDLEEAPG*LPLDCFRVILLLSV
Trigger: GACACTCAGGAGCAGAATGACTCTGAAACAGTCAAGAGGCAGCAAGCCTGGAGCTTCTTCCAAATCTTCTTGAATTCTCCTTTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS TCA 72 bp TTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTTaGACCATATATATGCAGAAGTTCATCGACCTCACT +
Preference number: 6 (lower is better)
Translates to: FPCIVSGNTVYC*TIYMQKFIDLT
Trigger: AGTGAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360366.8
ENST00000528391.6
CDS TCA 72 bp TTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTTaGACCATATATATGCAGAAGTTCATCGACCTGAGT +
Preference number: 6 (lower is better)
Translates to: FPCIVSGNTVYC*TIYMQKFIDLS
Trigger: ACTCAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456877.6
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp AGAGACAGAAATGGATTCAACCAGGAAACCGTAGAGTaGATCAGAAGCTCTCCCATCGAAAGTTCTGTTACC +
Preference number: 6 (lower is better)
Translates to: RDRNGFNQETVE*IRSSPIESSVT
Trigger: GGTAACAGAACTTTCGATGGGAGAGCTTCTGATGCACTCTACGGTTTCCTGGTTGAATCCATTTCTGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp AACACATTTTCTTTCTTGGGATGCTCTGGAACAGACTaGACTATGCTGTCTTCTGCAAACAGAGCACACCGA +
Preference number: 6 (lower is better)
Translates to: NTFSFLGCSGTD*TMLSSANRAHR
Trigger: TCGGTGTGCTCTGTTTGCAGAAGACAGCATAGTGCAGTCTGTTCCAGAGCATCCCAAGAAAGAAAATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS GCA 72 bp AAACCTGCTCCAACAGGTAATACAGGAAGGCATGCTTaGAACCTCTGGATTCAATCAGAAACAATGCCTGAG +
Preference number: 6 (lower is better)
Translates to: KPAPTGNTGRHA*NLWIQSETMPE
Trigger: CTCAGGCATTGTTTCTGATTGAATCCAGAGGTTGCAAGCATGCCTTCCTGTATTACCTGTTGGAGCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS CCA 72 bp CATAAAAAGGAAAAGTTCAAAGAAACCTGCTCCCTCTaGGAGAACGGATCACATCTAAGTCGGCTGTTGGGA +
Preference number: 6 (lower is better)
Translates to: HKKEKFKETCSL*ENGSHLSRLLG
Trigger: TCCCAACAGCCGACTTAGATGTGATCCGTTCTCCCAGAGGGAGCAGGTTTCTTTGAACTTTTCCTTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275246.11
ENST00000462408.2
ENST00000546145.1
CDS CCA 72 bp CCAACAGGTAATACAGGAAGGCATGCTTGCAACCTCTaGATTCAATCAGAAACAATGCCTGAGAGTACAGAG +
Preference number: 6 (lower is better)
Translates to: PTGNTGRHACNL*IQSETMPESTE
Trigger: CTCTGTACTCTCAGGCATTGTTTCTGATTGAATCCAGAGGTTGCAAGCATGCCTTCCTGTATTACCTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449545.2
ENST00000460692.2
CDS CCA 72 bp GCCAAAGTGGTCTCTTCGACCAAGATGATCTATACCTaGCCTCACAAGATTCTCTCTTATATCTACAGGAGG +
Preference number: 6 (lower is better)
Translates to: AKVVSSTKMIYT*PHKILSYIYRR
Trigger: CCTCCTGTAGATATAAGAGAGAATCTTGTGAGGCCAGGTATAGATCATCTTGGTCGAAGAGACCACTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 72 bp TTTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTaGAACCATATATATGCAGAAGTTCATCGACCTCAC +
Preference number: 6 (lower is better)
Translates to: FPMHCLGEHRLL*NHIYAEVHRPH
Trigger: GTGAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360366.8
ENST00000528391.6
CDS CAA 72 bp ATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCCTTATGAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: IHSSRMSWLKVS*SFIHRALMRLR
Trigger: CCTCAGCCTCATAAGGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431620.6
CDS CAA 72 bp TTTCCCATGCATTGTCTCGGGGAACACCGTCTACTGTaGAACCATATATATGCAGAAGTTCATCGACCTGAG +
Preference number: 6 (lower is better)
Translates to: FPMHCLGEHRLL*NHIYAEVHRPE
Trigger: CTCAGGTCGATGAACTTCTGCATATATATGGTTCAACAGTAGACGGTGTTCCCCGAGACAATGCATGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000456877.6
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 72 bp AGGAGAATTCAAGAAGATTTGGAAGAAGCTCCAGGCTaGCTGCCTCTTGACTGTTTCAGAGTCATTCTGCTC +
Preference number: 6 (lower is better)
Translates to: RRIQEDLEEAPG*LPLDCFRVILL
Trigger: GAGCAGAATGACTCTGAAACAGTCAAGAGGCAGCAAGCCTGGAGCTTCTTCCAAATCTTCTTGAATTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS TCA 72 bp CCATGCTGCCATCTGCTTAAACTTAACCCAGGTAGCTaGAGACGAAAGACTTCATATTCTGCTAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: PCCHLLKLNPGS*RRKTSYSARSF
Trigger: GAAGCTTCTAGCAGAATATGAAGTCTTTCGTCTTCAGCTACCTGGGTTAAGTTTAAGCAGATGGCAGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535064.1
CDS GCA 72 bp CATGCTGTACATAAAAAGGAAAAGTTCAAAGAAACCTaGTCCCTCTGGGAGAACGGATCACATCTAAGTCGG +
Preference number: 6 (lower is better)
Translates to: HAVHKKEKFKET*SLWENGSHLSR
Trigger: CCGACTTAGATGTGATCCGTTCTCCCAGAGGGAGCAGGTTTCTTTGAACTTTTCCTTTTTATGTACAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462408.2
CDS GCA 72 bp ACTGTCAACAATCCATCATCCCTGCTAATGGTGGGATaGAGTGTCACAGATAATTTAAACAGCTGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: TVNNPSSLLMVG*SVTDNLNSCQS
Trigger: GCTCTGACAGCTGTTTAAATTATCTGTGACACTGCATCCCACCATTAGCAGGGATGATGGATTGTTGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538270.5
CDS GCA 72 bp GGACAGCATTTGCAGTGTGTACTACATTTCAATTCCTaGTTTAGAGGAAAAGTATGTTGGGGGAGGATCCGT +
Preference number: 6 (lower is better)
Translates to: GQHLQCVLHFNS*FRGKVCWGRIR
Trigger: ACGGATCCTCCCCCAACATACTTTTCCTCTAAAGCAGGAATTGAAATGTAGTACACACTGCAAATGCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539296.1
CDS CAA 72 bp TCGGCGGTTTCTGTAGATGTTTCTATGTTCTCAGTGTaGGTCCTGCTCATTTCCAACTCTCGCATGAAATTC +
Preference number: 6 (lower is better)
Translates to: SAVSVDVSMFSV*VLLISNSRMKF
Trigger: GAATTTCATGCGAGAGTTGGAAATGAGCAGGACCAACACTGAGAACATAGAAACATCTACAGAAACCGCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CAA 90 bp AGTGTAATCATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCCTGCTTAAACTTAACCCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: SVIIHSSRMSWLKVS*SFIHRALLKLNPGS
Trigger: GCTACCTGGGTTAAGTTTAAGCAGGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAATGATTACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS TCA 72 bp CCGAAGAGCAAGAATTCCATGTGGACTTGGAGTTCCTaGCCATTCAGCAGTCATTCATTTCAGTTAAAGGTA +
Preference number: 6 (lower is better)
Translates to: PKSKNSMWTWSS*PFSSHSFQLKV
Trigger: TACCTTTAACTGAAATGAATGACTGCTGAATGGTCAGGAACTCCAAGTCCACATGGAATTCTTGCTCTTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449545.2
CDS TCA 72 bp ATACACAGAGCCCTGCTTAAACTTAACCCAGGTAGCTaGAGACGAAAGACTTCATATTCTGCTAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: IHRALLKLNPGS*RRKTSYSARSF
Trigger: GAAGCTTCTAGCAGAATATGAAGTCTTTCGTCTTCAGCTACCTGGGTTAAGTTTAAGCAGGGCTCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CCA 72 bp CTTCTATTTCTGACTTCGTATGGATCAGTTCCCATATaGAATTATTTTCTGTCCCTGCTGGATTCCCCAGTC +
Preference number: 6 (lower is better)
Translates to: LLFLTSYGSVPI*NYFLSLLDSPV
Trigger: GACTGGGGAATCCAGCAGGGACAGAAAATAATTCCATATGGGAACTGATCCATACGAAGTCAGAAATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CAA 72 bp TCCTCTGTCGAAAGCATCCACTTAGTTTCTAATTCTTaGCCATCAGCACTTAGGAAAGACCCTGTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: SSVESIHLVSNS*PSALRKDPVSA
Trigger: AGCACTTACAGGGTCTTTCCTAAGTGCTGATGGCAAAGAATTAGAAACTAAGTGGATGCTTTCGACAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535231.5
CDS CAA 72 bp ATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCTCAGCACTTAGGAAA +
Preference number: 6 (lower is better)
Translates to: IHSSRMSWLKVS*SFIHRASALRK
Trigger: TTTCCTAAGTGCTGAGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538270.5
CDS CAA 90 bp TTGAAGGCTTTGTCAGTTTTAGCTCGCTCCAGAACCTTCTGTACTTaGATATGGTTAGCACAGAATCCACTGTACAGTTTAAAGTGGTCC +
Preference number: 6 (lower is better)
Translates to: LKALSVLARSRTFCT*IWLAQNPLYSLKWS
Trigger: GGACCACTTTAAACTGTACAGTGGATTCTGTGCTAACCATATCAAAGTACAGAAGGTTCTGGAGCGAGCTAAAACTGACAAAGCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS TCA 72 bp TTACACGTTTTCTCCAGTGGTAATTCACACTTTATGTaGCGCCTGAAGTTCTCCCTCAGAATAGAACGAATC +
Preference number: 6 (lower is better)
Translates to: LHVFSSGNSHFM*RLKFSLRIERI
Trigger: GATTCGTTCTATTCTGAGGGAGAACTTCAGGCGTCACATAAAGTGTGAATTACCACTGGAGAAAACGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp GTTTTAGCTCGCTCCAGAACCTTCTGTACTTTGATATaGTTAGCACAGAATCCACTGTACAGTTTAAAGTGG +
Preference number: 6 (lower is better)
Translates to: VLARSRTFCTLI*LAQNPLYSLKW
Trigger: CCACTTTAAACTGTACAGTGGATTCTGTGCTAACCATATCAAAGTACAGAAGGTTCTGGAGCGAGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000528535.5
ENST00000529824.6
ENST00000682666.1
CDS CCA 72 bp ATGGTTTCTGGCCGTCCTTCTATTTCTGACTTCGTATaGATCAGTTCCCATATGGAATTATTTTCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: MVSGRPSISDFV*ISSHMELFSVP
Trigger: AGGGACAGAAAATAATTCCATATGGGAACTGATCCATACGAAGTCAGAAATAGAAGGACGGCCAGAAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp TTTTGCTTTCACTGTCACTGCAACACAACTGAAAGATaGTTTCTGGCCGTCCTTCTATTTCTGACTTCGTAT +
Preference number: 6 (lower is better)
Translates to: FCFHCHCNTTER*FLAVLLFLTSY
Trigger: ATACGAAGTCAGAAATAGAAGGACGGCCAGAAACCATCTTTCAGTTGTGTTGCAGTGACAGTGAAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS CCA 72 bp ACACTTAGTGTAATCATTCATTCATCCAGAATGAGCTaGCTGAAGGTATCCTTGTCATTCATACACAGAGCC +
Preference number: 6 (lower is better)
Translates to: TLSVIIHSSRMS*LKVSLSFIHRA
Trigger: GGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAATGATTACACTAAGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431620.6
ENST00000461783.7
ENST00000528535.5
ENST00000535231.5
ENST00000538270.5
ENST00000682666.1
CDS CAA 72 bp ATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCCTGCTTAAACTTAAC +
Preference number: 6 (lower is better)
Translates to: IHSSRMSWLKVS*SFIHRALLKLN
Trigger: GTTAAGTTTAAGCAGGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 72 bp ATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCCTTAGTTTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: IHSSRMSWLKVS*SFIHRALSFSF
Trigger: GAAGGAAAAACTAAGGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528535.5
CDS CAA 90 bp AATTTGCTTAGCACCAGTAATAGTATTGCTATGATTTTTAGATCCTaGAAGGGTGTACTGACTGTCGGAGTTGCCCATTTTAACCTGACG +
Preference number: 6 (lower is better)
Translates to: NLLSTSNSIAMIFRS*KGVLTVGVAHFNLT
Trigger: CGTCAGGTTAAAATGGGCAACTCCGACAGTCAGTACACCCTTCAAGGATCTAAAAATCATAGCAATACTATTACTGGTGCTAAGCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000461783.7
ENST00000528535.5
ENST00000535231.5
ENST00000535583.1
ENST00000538270.5
ENST00000682666.1
CDS TCA 72 bp CAACTGAAAGATGGTTTCTGGCCGTCCTTCTATTTCTaGCTTCGTATGGATCAGTTCCCATATGGAATTATT +
Preference number: 6 (lower is better)
Translates to: QLKDGFWPSFYF*LRMDQFPYGII
Trigger: AATAATTCCATATGGGAACTGATCCATACGAAGTCAGAAATAGAAGGACGGCCAGAAACCATCTTTCAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275246.11
ENST00000360366.8
ENST00000456877.6
ENST00000461783.7
ENST00000528391.6
ENST00000529824.6
ENST00000537845.1
ENST00000682666.1
CDS TCA 72 bp TTTTCTTCATTTGCCTTTAGCCTGGGCTTGATTGGATaGGTCAGATTCCCAAATTCTCTAGTTCCATGTAGT +
Preference number: 6 (lower is better)
Translates to: FSSFAFSLGLIG*VRFPNSLVPCS
Trigger: ACTACATGGAACTAGAGAATTTGGGAATCTGACTCATCCAATCAAGCCCAGGCTAAAGGCAAATGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535583.1
CDS CCA 72 bp TGTCAGTTTTTCATAAAGTTCAGGATCATTCTGTACTaGTATAGGTGGTGGCTGAGCATGTCTCTCTGTATT +
Preference number: 6 (lower is better)
Translates to: CQFFIKFRIILY*YRWWLSMSLCI
Trigger: AATACAGAGAGACATGCTCAGCCACCACCTATACCAGTACAGAATGATCCTGAACTTTATGAAAAACTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461783.7
CDS CAA 72 bp AGCACCAGTAATAGTATTGCTATGATTTTTAGATCCTaGAAGGGTGTACTGACTGTCGGAGTTGCCCATTTT +
Preference number: 6 (lower is better)
Translates to: STSNSIAMIFRS*KGVLTVGVAHF
Trigger: AAAATGGGCAACTCCGACAGTCAGTACACCCTTCAAGGATCTAAAAATCATAGCAATACTATTACTGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360366.8
ENST00000461783.7
ENST00000528535.5
ENST00000535231.5
ENST00000535583.1
ENST00000538270.5
ENST00000682666.1
CDS CAA 72 bp TTGGGTATTCTAATACAGGTATCCATGGTCCACACATaGAGAAACACTGATCTTAAAGGTGTGAGACATCCT +
Preference number: 6 (lower is better)
Translates to: LGILIQVSMVHT*RNTDLKGVRHP
Trigger: AGGATGTCTCACACCTTTAAGATCAGTGTTTCTCAATGTGTGGACCATGGATACCTGTATTAGAATACCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461783.7
ENST00000535064.1
CDS CAA 72 bp ATTCATTCATCCAGAATGAGCTGGCTGAAGGTATCCTaGTCATTCATACACAGAGCCCTTTTCTTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: IHSSRMSWLKVS*SFIHRALFFSH
Trigger: ATGAGAAAAGAAAAGGGCTCTGTGTATGAATGACAAGGATACCTTCAGCCAGCTCATTCTGGATGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535231.5
CDS TCA 72 bp CTTTTAGCTCTATTAGGTCTTGGGAAGGGCTCAGCCTaGATTTTAAACAAATCCTTTGGGTATTCTAATACA +
Preference number: 6 (lower is better)
Translates to: LLALLGLGKGSA*ILNKSFGYSNT
Trigger: TGTATTAGAATACCCAAAGGATTTGTTTAAAATTCAGGCTGAGCCCTTCCCAAGACCTAATAGAGCTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461783.7
ENST00000535064.1
CDS CAA 90 bp AATTTGCTTAGCACCAGTAATAGTATTGCTATGATTTTTAGATCCTaGAAGGGTGTACTGACTGTCGGAGTTGCCCATTTTAACCTAAAT +
Preference number: 6 (lower is better)
Translates to: NLLSTSNSIAMIFRS*KGVLTVGVAHFNLN
Trigger: ATTTAGGTTAAAATGGGCAACTCCGACAGTCAGTACACCCTTCAAGGATCTAAAAATCATAGCAATACTATTACTGGTGCTAAGCAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360366.8