RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIAM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156299

Ensembl transcript IDs: ENST00000286827.7, ENST00000423206.5, ENST00000455508.1, ENST00000469412.5, ENST00000491927.1, ENST00000541036.5, ENST00000636887.1

Found 868 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCCTCTCCTCACACATTCTTAAAATACACGGAGATTCTCAGACATaGAAGAGGGAAGGGTACAGTCAGAACACGGCAAGCTGTACACAT +
Preference number: 1 (lower is better)
Translates to: TLSSHILKIHGDSQT*KREGYSQNTASCTH
Trigger: ATGTGTACAGCTTGCCGTGTTCTGACTGTACCCTTCCCTCTTCCATGTCTGAGAATCTCCGTGTATTTTAAGAATGTGTGAGGAGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGACGGTACAGGAGGGTaGGCAGAGTTAGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GFRTKSAAKTVCARARPKDGTGG*AELGQE
Trigger: TTCCTGCCCTAACTCTGCCCACCCTCCTGTACCGTC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGAGGCTCCCCTCCCTaGCATGTGCAACAGACACAC +
Preference number: 2 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGGSPP*HVQQTH
Trigger: GTGTGTCTGTTGCACATGGCAGGGAGGGGAGCCTCC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGACGGTACAGGAGGGTaGGCAGAGTTAGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIDGTGG*AELGQE
Trigger: TTCCTGCCCTAACTCTGCCCACCCTCCTGTACCGTC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR CAA 90 bp AGGGAAGGGTACAGTCAGAACACGGCAAGCTGTACACATTTCATTTaGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCAGAT +
Preference number: 2 (lower is better)
Translates to: REGYSQNTASCTHFI*CVKEVSPARRLISD
Trigger: ATCTGAAATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGACTGTACCCTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCCCAGCTAGGAGACTaGTTTCAGATAGAAGGATCG +
Preference number: 2 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPQLGD*FQIEGS
Trigger: CGATCCTTCTATCTGAAATCAGTCTCCTAGCTGGGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGTTGGGTGGCTACATaGCTTCAGAACCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISWVAT*LQNQVS
Trigger: GCTGACTTGGTTCTGAAGCCATGTAGCCACCCAACT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGAGATTCTCAGACATaGAAGAGGGAAGGGTACAGT +
Preference number: 2 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGDSQT*KREGYS
Trigger: ACTGTACCCTTCCCTCTTCCATGTCTGAGAATCTCC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGGCTCATTGAAACATaGATCGCCACCCTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKRLIET*IATLSS
Trigger: TGAGGAGAGGGTGGCGATTCATGTTTCAATGAGCCT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGTATATCCTTCGCATaGGCTTGCTGGCCTTTCATA +
Preference number: 2 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISISFA*ACWPFI
Trigger: TATGAAAGGCCAGCAAGCTCATGCGAAGGATATACT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCAGAACCAAGTCAGCTaGCAAAACCGTGTGTGCAAG +
Preference number: 2 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVQNQVS*QNRVCK
Trigger: CTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCAGAACCAAGTCAGCTaGCAAAACCGTGTGTGCAAG +
Preference number: 2 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKQNQVS*QNRVCK
Trigger: CTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGTTGGGTGGCTACATaGCTTCAGAACCAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSWVAT*LQNQVS
Trigger: GCTGACTTGGTTCTGAAGCCATGTAGCCACCCAACT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAATGACAAAGTTGGGTaGCTACATGGCTTCAGAACC +
Preference number: 2 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNINDKVG*LHGFRT
Trigger: GGTTCTGAAGCCATGTAGCCACCCAACTTTGTCATT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTACATCCGTTAACTCCTaGGGTGATTTGCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: CTHFILCVKEVSPARRLITSVNS*GDLLSS
Trigger: ACTGGAAAGCAAATCACCCCAGGAGTTAACGGATGT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGGAGATTCTCAGACATaGAAGAGGGAAGGGTACAGT +
Preference number: 2 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVGDSQT*KREGYS
Trigger: ACTGTACCCTTCCCTCTTCCATGTCTGAGAATCTCC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGTATATCCTTCGCATaGGCTTGCTGGCCTTTCATA +
Preference number: 2 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSISFA*ACWPFI
Trigger: TATGAAAGGCCAGCAAGCTCATGCGAAGGATATACT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGTATATCCTTCGCATaGGCTTGCTGGCCTTTCATA +
Preference number: 2 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSISFA*ACWPFI
Trigger: TATGAAAGGCCAGCAAGCTCATGCGAAGGATATACT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAACATCCGTTAACTCCTaGGGTGATTTGCTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLTSVNS*GDLLSS
Trigger: ACTGGAAAGCAAATCACCCCAGGAGTTAACGGATGT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTATTCTCATCTATTTGTaGCCCTGTATCTCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVILIYL*PCISGK
Trigger: TTTACCTGAGATACAGGGGCACAAATAGATGAGAAT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR CCA 72 bp CCCTCTCCAAGCACCAGACTTCCGAGTGTTTTCAGATaGATGTGTTGCACTGGAGCCAGTAAATGCGACGAT +
Preference number: 3 (lower is better)
Translates to: PSPSTRLPSVFR*MCCTGASKCDD
Trigger: ATCGTCGCATTTACTGGCTCCAGTGCAACACATCCATCTGAAAACACTCGGAAGTCTGGTGCTTGGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCTAAGGGGACATTCTaGTCGACGGTACAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPKGTF*STVQEG
Trigger: ACCCTCCTGTACCGTCGACAAGAATGTCCCCTTAGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCTAAGGGGACATTCTaGTCGACGGTACAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPKGTF*STVQEG
Trigger: ACCCTCCTGTACCGTCGACAAGAATGTCCCCTTAGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCTAAGGGGACATTCTaGTCGACGGTACAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPKGTF*STVQEG
Trigger: ACCCTCCTGTACCGTCGACAAGAATGTCCCCTTAGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR CCA 72 bp TCACACATTCTTAAAATACACGGAGATTCTCAGACATaGAAGAGGGAAGGGTACAGTCAGAACACGGCAAGC +
Preference number: 3 (lower is better)
Translates to: SHILKIHGDSQT*KREGYSQNTAS
Trigger: GCTTGCCGTGTTCTGACTGTACCCTTCCCTCTTCCATGTCTGAGAATCTCCGTGTATTTTAAGAATGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR CCA 72 bp ATTCTTTCTGATGTTGTTGAAAATGACAAAGTTGGGTaGCTACATGGCTTCAGAACCAAGTCAGCTGCCAAA +
Preference number: 3 (lower is better)
Translates to: ILSDVVENDKVG*LHGFRTKSAAK
Trigger: TTTGGCAGCTGACTTGGTTCTGAAGCCATGTAGCCACCCAACTTTGTCATTTTCAACAACATCAGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATCAGGCCCTGATTTATaGAGAATAAATAAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSGPDL*RINKSP
Trigger: AGGGCTTTTATTTATTCTCAATAAATCAGGGCCTGA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAAAATTCTCATCTATTaGTGCCCCTGTATCTCAGGT +
Preference number: 3 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKKILIY*CPCISG
Trigger: ACCTGAGATACAGGGGCACAAATAGATGAGAATTTT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTCAGGCCCTGATTTATaGAGAATAAATAAAAGCCCT +
Preference number: 3 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSGPDL*RINKSP
Trigger: AGGGCTTTTATTTATTCTCAATAAATCAGGGCCTGA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR TCA 72 bp AAGAAATATATAAGAACTTTTGACATAGACACGTCATaGCCTTATGTACAAGAGACAATGGCACCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: KKYIRTFDIDTS*PYVQETMAPSP
Trigger: TGGAGAGGGTGCCATTGTCTCTTGTACATAAGGTCATGACGTGTCTATGTCAAAAGTTCTTATATATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR CCA 72 bp TCCCTTAAATTAATCTGTTGTACATCCGTTAACTCCTaGGGTGATTTGCTTTCCAGTGCTATAGAATCTTTT +
Preference number: 3 (lower is better)
Translates to: SLKLICCTSVNS*GDLLSSAIESF
Trigger: AAAAGATTCTATAGCACTGGAAAGCAAATCACCCCAGGAGTTAACGGATGTACAACAGATTAATTTAAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
3UTR CCA 72 bp ACTGTTAATGTTTTGAGCATGTTTACCCTGTTTCGTTaGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTT +
Preference number: 3 (lower is better)
Translates to: TVNVLSMFTLFR*HEESVKHKRSF
Trigger: AAAACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAACATTAACAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGGGCAGACACTGCCCTaGTCATGGCCGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKGQTLP*SWPAWP
Trigger: GGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGAGCCGCATCCCCGGTaGAGCTGCTGCCGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATEPHPR*SCCRCR
Trigger: GCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCGTGCAGTGTCGCCTaGCCGGACGACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPCSVA*PDDRQG
Trigger: GCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCCGTGCAGTGTCGCCTaGCCGGACGACCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATPCSVA*PDDRQG
Trigger: GCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCTCTGACAGGTGCTaGGCTGCCGCGGACTCGCCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLSDRC*AAADSP
Trigger: GGGCGAGTCCGCGGCAGCTCAGCACCTGTCAGAGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGCTGCCGCTGTCGCTaGCCACAAAGGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCCRCR*PQRPGL
Trigger: CAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCCCGGTGGAGCTGCTaGCGCTGTCGCTGCCCACAA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPRWSC*RCRCPQ
Trigger: TTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCTGCTCATCGCTGTaGGCCGAGCCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLCSSL*AEPASS
Trigger: GGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGCGCACCGTGCCCTGTaGGGCGGTCAGCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKAHRAL*GGQQDV
Trigger: GACATCCTGCTGACCGCCGCACAGGGCACGGTGCGC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCCAGGGTGTCCCGTaGAGTGTCGCCTGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLQGVP*SVAWPD
Trigger: GTCCGGCCAGGCGACACTGCACGGGACACCCTGGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTCTCGTACACCCCCTaGCGAGCCGCATCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFSYTP*RAASPV
Trigger: CACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCAGGGACTGGGGGATaGTGGGGGTGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPGTGG*WGCCWI
Trigger: GATCCAGCAGCACCCCCAGCATCCCCCAGTCCCTGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCCATGCGGGACGCGTaGCTATCCAGGGTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATAMRDA*LSRVFR
Trigger: CCGGAAAACCCTGGATAGTCACGCGTCCCGCATGGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGACCATGGCAACCCCATaGGAAGGAGGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKTMATP*EGGSPP
Trigger: GGGAGGGGAGCCTCCTTCTCATGGGGTTGCCATGGT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGCGGGAAGTGTGCTTaGGCCCCAGGCTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSGKCA*APGWHA
Trigger: AGCATGCCAGCCTGGGGCGCAAGCACACTTCCCGCT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTTCCCCGAGGAAGCGTaGCTGGTCCTCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKFPEEA*LVLRVL
Trigger: CAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTCTTCCTTGTGGTGGTaGCTCGCGACCGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSSLWW*LATAVA
Trigger: CGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGTGAGACCCCGGAGCTaGACTCGCTTCCCACCAGTG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKVRPRS*TRFPPV
Trigger: CACTGGTGGGAAGCGAGTGCAGCTCCGGGGTCTCAC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGCTGGGGGTGCTGCTaGATCGGGTGCTCACTTCGG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCWGCC*IGCSLR
Trigger: CCGAAGTGAGCACCCGATCCAGCAGCACCCCCAGCA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCCCCTCGGTCTCCTCTaGAGCGGTCTCAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATPLGLL*SGLSTA
Trigger: AGCAGTGCTGAGACCGCTCCAGAGGAGACCGAGGGG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCGACTCCAGCGTGGATaGGTGCTGCTGCTTCGGGTT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATRLQRG*VLLLRV
Trigger: AACCCGAAGCAGCAGCACTCATCCACGCTGGAGTCG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGGATGCTGGGGGTGCTaGTGGATCGGGTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATGCWGC*WIGCSL
Trigger: AAGTGAGCACCCGATCCAGCAGCACCCCCAGCATCC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCTCGCTGTTGGTGGTaGTCATCTCCAGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSRCWW*SSPAPA
Trigger: GGCGGGAGCTGGAGATGAGCACCACCAACAGCGAGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGTTCCTTTTTCCACTTaGCCAGCGAGGCCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATVPFST*PARPAG
Trigger: ACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAAC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGGAGGCTCCCCTCCCTaGCATGTGCAACAGACACAC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATGGSPP*HVQQTH
Trigger: GTGTGTCTGTTGCACATGGCAGGGAGGGGAGCCTCC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGGAGGCTCCCCTCCCTaGCATGTGCAACAGACACAC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKGGSPP*HVQQTH
Trigger: GTGTGTCTGTTGCACATGGCAGGGAGGGGAGCCTCC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAGCGTGTCTTCCTTGTaGTGGTGCCTCGCGACCGCA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSVSSL*WCLATA
Trigger: TGCGGTCGCGAGGCACCACCACAAGGAAGACACGCT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCAAGCTCGAAGCCCTaGAAACCCGAAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSSSKP*KPERRG
Trigger: CCCCCGCCTTTCGGGTTTCCAGGGCTTCGAGCTTGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTCAAGCTCGAAGCCCTaGAAACCCGAAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSSSKP*KPERRG
Trigger: CCCCCGCCTTTCGGGTTTCCAGGGCTTCGAGCTTGA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGCACAGAGGCTGCTGTaGGGACGATGCTGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKAQRLL*GRCCCL
Trigger: TAGACAGCAGCATCGTCCTCACAGCAGCCTCTGTGC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAGCTCGCCGTCTCCATaGAAGTGGGCCCATTGGATG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSSPSP*KWAHWM
Trigger: CATCCAATGGGCCCACTTTCATGGAGACGGCGAGCT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCTCTGCACAGAGGCTaGTGTGAGGACGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATALHRG*CEDDAA
Trigger: AGCAGCATCGTCCTCACAGCAGCCTCTGTGCAGAGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCCAGTTTCACCAGTaGGTGCTGCCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLQFHQ*VLPPGH
Trigger: ATGCCCTGGTGGCAGCACGCACTGGTGAAACTGGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGCGTGGATGAGTGCTaGTGCTTCGGGTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSVDEC*CFGFWA
Trigger: TGCCCAGAACCCGAAGCAGCAGCACTCATCCACGCT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCACTCTTTCTCCGGGCTaGTTGCGGAGACGGCATCAG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATTLSPG*LRRRHQ
Trigger: CTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCCCGACAGGGCAGCTTaGTTCTTGAGCTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATPDRAA*FLSCAM
Trigger: CATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCTCGCTTCCCACCAGTaGCCTCTGGGAAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATLASHQ*PLGSCQ
Trigger: TTGACAGCTTCCCAGAGGGCACTGGTGGGAAGCGAG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCGGTCCACCCAGATaGGGCTCCCGAAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLGPPR*GSRSLL
Trigger: TAGAAGACTTCGGGAGCCCCATCTGGGTGGACCGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCTCTCCTCAGTGTCTaGCATGCTCTGCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATALLSV*HALHRG
Trigger: GCCTCTGTGCAGAGCATGCCAGACACTGAGGAGAGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCAGGCTCTCGCTGTTaGTGGTGCTCATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPGSRC*WCSSPA
Trigger: AGCTGGAGATGAGCACCACCAACAGCGAGAGCCTGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTCCAAGGCGGCCCATaGCCACTTTCGTTGGTCGAC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFQGGP*PLSLVD
Trigger: GTCGACCAACGAAAGTGGCCATGGGCCGCCTTGGAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGACCGTCAGGGCAGGCTaGTTATTGGGCAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKTVRAG*LLGRQN
Trigger: GTTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCACCGTCAGGGCAGGCTaGTTATTGGGCAGACAGAAC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATTVRAG*LLGRQN
Trigger: GTTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGCAGAAGTGGGTACTTaGGGATCCTCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKAEVGT*GSSGWA
Trigger: AGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCAGAAGTGGGTACTTaGGGATCCTCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATAEVGT*GSSGWA
Trigger: AGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCTTTCTCCCTCTGATTaGTGCTTGGCCGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATLSPSD*CLAVPA
Trigger: AGCAGGGACGGCCAAGCATCAATCAGAGGGAGAAAG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCGGCGTGTTTGGGGATaGTGTTGTGGTCTATCCCAG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKRRVWG*CCGLSQ
Trigger: CTGGGATAGACCACAACAGCATCCCCAAACACGCCG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCTCGCAGATCACCTTaGGCAGCTTATCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATARRSP*AAYLHP
Trigger: CGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGCTCGCAGATCACCTTaGGCAGCTTATCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKARRSP*AAYLHP
Trigger: CGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAATCCTTCACGTAGGTaGGCTCCGTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKNPSRR*APSPGA
Trigger: AGCTCCTGGAGACGGAGCGCACCTACGTGAAGGATT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGGCAGACACTGCCCTaGTCATGGCCGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGQTLP*SWPAWP
Trigger: GGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTTCTCCGGGCTGCTTaGGGAGACGGCATCAGAATC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFLRAA*GDGIRI
Trigger: GATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGACCTGCCCCCTGCGGTaGCCATCACAGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKTCPLR*PSQFHL
Trigger: TAGATGAAACTGTGATGGCCACCGCAGGGGGCAGGT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTCCACTTCCTCCGGGTaGCTGACTCCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSTSSG*LTPPSC
Trigger: ACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTGGGGATGCTGTTGTaGTCTATCCCAGACCTGCCG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATLGMLL*SIPDLP
Trigger: CGGCAGGTCTGGGATAGACCACAACAGCATCCCCAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGGCCGTCCACTCGGTaGGGCGGGCTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGPSTR*GGLSSS
Trigger: GCTGCTGGAAAGCCCGCCCCACCGAGTGGACGGCCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGATCTGGACATGGCCTaGGTACGTCTTCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATDLDMA*VRLLTP
Trigger: TGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGTGATCAGTCTCATCTaGGGATTCCAAGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATVISLI*GFQVWP
Trigger: GGGCCAGACTTGGAATCCTCAGATGAGACTGATCAC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGTGATCAGTCTCATCTaGGGATTCCAAGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKVISLI*GFQVWP
Trigger: GGGCCAGACTTGGAATCCTCAGATGAGACTGATCAC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGTCCTCCGCGTCTTGTaGGAGAGGCGCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQVLRVL*ERRRER
Trigger: CCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGAC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATGCTGCCGCTGTCGCTaGCCACAAAGGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQCCRCR*PQRPGL
Trigger: CAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCATCCCCGGTGGAGCTaGTGCCGCTGTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPHPRWS*CRCRCP
Trigger: TGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGCGCACCGTGCCCTGTaGGGCGGTCAGCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPAHRAL*GGQQDV
Trigger: GACATCCTGCTGACCGCCGCACAGGGCACGGTGCGC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACGGCCTTGCGCACCGTaGCCTGTGCGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRPCAP*PVRRSA
Trigger: TGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGGTCTATCCCAGACCTaGCGTCGCTCTCGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKGLSQT*RRSRRK
Trigger: TTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCTCCAGGGTGTCCCGTaGAGTGTCGCCTGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPLQGVP*SVAWPD
Trigger: GTCCGGCCAGGCGACACTGCACGGGACACCCTGGAG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTCACACACGGCATTTaGCTCTGCATCTGCACTCGC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFTHGI*LCICTR
Trigger: GCGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGCTTGCGCCCCAGGCTaGCATGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKACAPG*HAFLHK
Trigger: TTTATGGAGAAAAGCATGCCAGCCTGGGGCGCAAGC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCACTTCGGAGTTCCTGTaGATCACCTTCCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATTSEFL*ITFPEE
Trigger: TTCCTCGGGGAAGGTGATCCACAGGAACTCCGAAGT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGGACTGGGGGATGCTaGGGGTGCTGCTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGTGGC*GCCWIG
Trigger: CCCGATCCAGCAGCACCCCCAGCATCCCCCAGTCCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGCTGCTTCGGGTTCTaGGCATCCAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCCFGF*ASKNAL
Trigger: CAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTGCTGCTTCGGGTTCTaGGCATCCAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATCCFGF*ASKNAL
Trigger: CAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCGGCCTGTGGTGGGTaGGTAGCTGGAGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPACGG*VAGVGG
Trigger: GCCACCAACTCCAGCTACTCACCCACCACAGGCCGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCAGGGTTGTGCTGGTaGACGTTAGGTAAGACCACT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSGLCW*TLGKTT
Trigger: AGTGGTCTTACCTAACGTTCACCAGCACAACCCTGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGCCCCGTGGAGTCCTaGGGAGATGGGCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGPVES*GDGLWS
Trigger: TGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCATCCAAGAATGCCTTaGAAGCCGTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATHPRMP*KPCLSW
Trigger: CCAAGACAGACACGGCTTTCAAGGCATTCTTGGATG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCATGTGTCGAAATCTaGAGGGGTCCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSCVEI*RGPSPH
Trigger: ATGAGGACTGGGACCCCTTCAGATTTCGACACATGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAGGCTCATTGAAACATaGATCGCCACCCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKRLIET*IATLSS
Trigger: TGAGGAGAGGGTGGCGATTCATGTTTCAATGAGCCT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGGGGATGCTGGGGGTaGTGCTGGATCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGGCWG*CWIGCS
Trigger: TGAGCACCCGATCCAGCAGCACCCCCAGCATCCCCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCAGGGACTGGGGGATaGTGGGGGTGCTGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPGTGG*WGCCWI
Trigger: GATCCAGCAGCACCCCCAGCATCCCCCAGTCCCTGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCTCACTGCCCTCGCCTaGATTAACATCCTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATLTALA*INILSC
Trigger: ACAACTCAGGATGTTAATGCAGGCGAGGGCAGTGAG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCATCTCATGCAAACTaGGGCAAAATGCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSSHAN*GKMRPP
Trigger: AGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGAGGGGTTCATCTCATaGAAACTGCGGCAAAATGCG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATEGFIS*KLRQNA
Trigger: CGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCAAAAGGGACATATTaGTGGGATGAGGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPKGTY*WDEGRL
Trigger: GAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCCGAGGAAGCGTGCCTaGTCCTCCGCGTCTTGTGCG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPPRKRA*SSASCA
Trigger: CGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCTTCAGCAGCAGCTaGTGGCATCTTATGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLFSSS*WHLMVC
Trigger: GCAAACCATAAGATGCCACCAGCTGCTGCTGAAGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGAGCCGCATCCCCGGTaGAGCTGCTGCCGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIEPHPR*SCCRCR
Trigger: GCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCCTCGCGACCGCAGTaGCGCAGGCAGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIASRPQ*RRQSGW
Trigger: CCATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGAACTTTTGTGTGGCTaGCGCAGAAGGCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKELLCG*RRRHCR
Trigger: TCTACAGTGCCTTCTGCGCCAGCCACACAAAAGTTC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAAAGGGACATATTGCTaGGATGAGGGAAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATKGTYC*DEGRLS
Trigger: CGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACACTGCCCTGCTCATaGCCGGCCTGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTLPCS*PAWPPS
Trigger: TGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCAGTGTTCAGTTTCCTaGAGGGGGCAAAGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATQCSVS*RGQSLH
Trigger: GTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGTTGGGTGGCTACATaGCTTCAGAACCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSWVAT*LQNQVS
Trigger: GCTGACTTGGTTCTGAAGCCATGTAGCCACCCAACT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCTTCAGAGAGACAGTaGGATTTCCTACAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPSERQ*DFLQGS
Trigger: ACTTCCCTGTAGGAAATCTCACTGTCTCTCTGAAGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCCCTGGGTTGCTGGTaGGAAAGGCGAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIALGCW*ERRGGS
Trigger: AGAGCCCCCTCGCCTTTCTCACCAGCAACCCAGGGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGGATGTCTGTCTCCTTaGTGTCATCTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKGCLSP*CHLAPH
Trigger: ATGAGGAGCAAGATGACATCAAGGAGACAGACATCC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACTGATGGAGGTGGCCTaGAGCCGCTCCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQLMEVA*SRSCRS
Trigger: AGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGCCATGCGGGACGCGTaGCTATCCAGGGTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPAMRDA*LSRVFR
Trigger: CCGGAAAACCCTGGATAGTCACGCGTCCCGCATGGC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGCCATGCGGGACGCGTaGCTATCCAGGGTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQAMRDA*LSRVFR
Trigger: CCGGAAAACCCTGGATAGTCACGCGTCCCGCATGGC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGATTAATTCTACCACCTaGCGTGTTCAGCACGGAGAC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKINSTT*RVQHGD
Trigger: GTCTCCGTGCTGAACACGTCAGGTGGTAGAATTAAT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGACGATGTCAGCACCTaGCCCCTGCGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPDDVST*PLRWPS
Trigger: TGATGGCCACCGCAGGGGGCAGGTGCTGACATCGTC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGGGAGCGGGAAGTGTaGTTGCGCCCCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIREREV*LRPRLA
Trigger: TGCCAGCCTGGGGCGCAAGCACACTTCCCGCTCCCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGTCCTCCGCGTCTTGTaGGAGAGGCGCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIVLRVL*ERRRER
Trigger: CCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGAC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTCTGCTCATCGCTGTaGGCCGAGCCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILCSSL*AEPASS
Trigger: GGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCGGCCTTGCGCACCGTaGCCTGTGCGGCGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVRPCAP*PVRRSA
Trigger: TGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATGCTGCCCTGCTCGCTaGAAAGGCTGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQCCPAR*KGCALG
Trigger: ACCCAGGGCACAGCCTTTGCAGCGAGCAGGGCAGCA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGGGCAGACACTGCCCTaGTCATGGCCGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLGQTLP*SWPAWP
Trigger: GGGCCAGGCCGGCCATGAGCAGGGCAGTGTCTGCCC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCAGGTCTAGAAAGGTaGGTCTCAGTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSGLER*VSVHSD
Trigger: ATCACTGTGGACTGAGACCCACCTTTCTAGACCTGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGGGACTGGGGGATGCTaGGGGTGCTGCTGGATCGGG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIGTGGC*GCCWIG
Trigger: CCCGATCCAGCAGCACCCCCAGCATCCCCCAGTCCC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTCAGCAGCAGCTGGTaGCATCTTATGGTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFSSSW*HLMVCK
Trigger: CTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCAGGATGTCCGACTaGCCCGGAGAGCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSRMSD*PGELRV
Trigger: CACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGGCCGTCCACTCGGTaGGGCGGGCTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGPSTR*GGLSSS
Trigger: GCTGCTGGAAAGCCCGCCCCACCGAGTGGACGGCCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTACTTGAGGATCCTCTaGATGGGCTTGATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKYLRIL*MGLMRY
Trigger: GTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGTTCAGCAATCAGCTaGTCAAACACAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCSAIS*SNTAPN
Trigger: GTTTGGGGCTGTGTTTGACCAGCTGATTGCTGAACA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGAATGCTGCCAACTCTaGTTCCTTTTTCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATECCQL*FLFPLA
Trigger: GGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTGCTCATGGCCGGCCTaGCCCCCTTCAGTGCACACA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPCSWPA*PPSVHT
Trigger: TGTGTGCACTGAAGGGGGCCAGGCCGGCCATGAGCA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCATGTACAAGAGACAATaGCACCCTCTCCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATMYKRQ*HPLQAP
Trigger: TGGTGCTTGGAGAGGGTGCCATTGTCTCTTGTACAT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCTCTCTGACAGGTGCTaGGCTGCCGCGGACTCGCCC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKLSDRC*AAADSP
Trigger: GGGCGAGTCCGCGGCAGCTCAGCACCTGTCAGAGAG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGCACCAGGAAGTTCTTaGCGGCCAGGGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVAPGSS*RPGRRP
Trigger: AGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGCACCAGGAAGTTCTTaGCGGCCAGGGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKAPGSS*RPGRRP
Trigger: AGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGCCCTGGGTTGCTGGTaGGAAAGGCGAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIALGCW*ERRGGS
Trigger: AGAGCCCCCTCGCCTTTCTCACCAGCAACCCAGGGC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGGCCCCGTGGAGTCCTaGGGAGATGGGCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIGPVES*GDGLWS
Trigger: TGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCAGGTCTCTGTCCACTaGGGCACCCTTCACGGACTC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPQVSVH*GTLHGL
Trigger: GAGTCCGTGAAGGGTGCCTCAGTGGACAGAGACCTG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCTCCAGGCCTCCATTaGTCCCCGACAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSPGLH*SPTGQL
Trigger: AAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAACCATGGCAACCCCATaGGAAGGAGGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNITMATP*EGGSPP
Trigger: GGGAGGGGAGCCTCCTTCTCATGGGGTTGCCATGGT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGATGCTGGGGGTGCTaGTGGATCGGGTGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGCWGC*WIGCSL
Trigger: AAGTGAGCACCCGATCCAGCAGCACCCCCAGCATCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCATCCCCGGTGGAGCTaGTGCCGCTGTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVHPRWS*CRCRCP
Trigger: TGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACGGTCTCAGCACTGCTaGCCTGCTCGCTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRSQHC*PARCKG
Trigger: GCCTTTGCAGCGAGCAGGGCAGCAGTGCTGAGACCG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCTGTTCTGTACTCTTaGTGCTGTGATCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPVLYS*CCDQSH
Trigger: ATGAGACTGATCACAGCAGCAAGAGTACAGAACAGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTCACGCAGGATTGAATaGACAGCCTTTAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSRRIE*TAFRKS
Trigger: GGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTGCATGCTGTTGCTATaGCTAATTTGTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATCMLLL*LICGLV
Trigger: CACCAACCCACAAATTAGCCATAGCAACAGCATGCA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGCATGCTGTTGCTATaGCTAATTTGTGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCMLLL*LICGLV
Trigger: CACCAACCCACAAATTAGCCATAGCAACAGCATGCA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGCTCTCGCTGTTGGTaGTGCTCATCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGSRCW*CSSPAP
Trigger: GGGAGCTGGAGATGAGCACCACCAACAGCGAGAGCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGCAGGATGTCCGACTaGCCCGGAGAGCTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISRMSD*PGELRV
Trigger: CACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGCCTCGCGACCGCAGTaGCGCAGGCAGAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVASRPQ*RRQSGW
Trigger: CCATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCCCTCGGTCTCCTCTaGAGCGGTCTCAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPLGLL*SGLSTA
Trigger: AGCAGTGCTGAGACCGCTCCAGAGGAGACCGAGGGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTACACTGCCCTGCTCATaGCCGGCCTGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLITLPCS*PAWPPS
Trigger: TGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCTGCATTAACATCCTaGGTTGTTTTAGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPALTS*VVLALL
Trigger: CAGAAGAGCTAAAACAACTCAGGATGTTAATGCAGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCCGGCCTGTGGTGGGTaGGTAGCTGGAGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVPACGG*VAGVGG
Trigger: GCCACCAACTCCAGCTACTCACCCACCACAGGCCGG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTTCTCGTACACCCCCTaGCGAGCCGCATCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKFSYTP*RAASPV
Trigger: CACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCAATGTGGATGCTCTaGGTGACTTTTGGACAGATT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSMWML*VTFGQI
Trigger: AATCTGTCCAAAAGTCACTCAGAGCATCCACATTGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTCAATGTGGATGCTCTaGGTGACTTTTGGACAGATT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSMWML*VTFGQI
Trigger: AATCTGTCCAAAAGTCACTCAGAGCATCCACATTGA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGCCCCGTGGAGTCCTaGGGAGATGGGCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGPVES*GDGLWS
Trigger: TGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATCTCTACGGGGCAGGTaGCGCAGTCAGATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSLRGR*RSQISV
Trigger: CACTGAGATCTGACTGCGTCACCTGCCCCGTAGAGA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCAAGGACAGCGACGGTaGGACCCCGGAGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKQGQRR*DPGAAL
Trigger: GAGTGCAGCTCCGGGGTCTCACCGTCGCTGTCCTTG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCAGCACCTGCCCCCTaGGGTGGCCATCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISAPAP*GGHHSF
Trigger: GAAACTGTGATGGCCACCGCAGGGGGCAGGTGCTGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGCGGGAAGTGTGCTTaGGCCCCAGGCTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISGKCA*APGWHA
Trigger: AGCATGCCAGCCTGGGGCGCAAGCACACTTCCCGCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGGGAGCGGGAAGTGTaGTTGCGCCCCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKREREV*LRPRLA
Trigger: TGCCAGCCTGGGGCGCAAGCACACTTCCCGCTCCCT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGGGGGATGCTGGGGGTaGTGCTGGATCGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVGGCWG*CWIGCS
Trigger: TGAGCACCCGATCCAGCAGCACCCCCAGCATCCCCC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGTGTCTGGCATGCTCTaGACAGAGGCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPVSGML*TEAAVR
Trigger: CCTCACAGCAGCCTCTGTGCAGAGCATGCCAGACAC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCTCGCTGTTGGTGGTaGTCATCTCCAGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISRCWW*SSPAPA
Trigger: GGCGGGAGCTGGAGATGAGCACCACCAACAGCGAGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGGGTGCCGCTGCTCTaGTCATCGCTGTGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKRVPLL*SSLCAE
Trigger: CTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCCGGAGAGCTCAGGGTaGCGCTGCTCTGCTCATCGC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKPESSG*RCSAHR
Trigger: GCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTGCTCAGGCACCGCCTaGACAATGCTGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPCSGTA*TMLFST
Trigger: GGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAAGTCCTTCTTGGGGTaGTCAGGCACCGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQKSFLG*SGTACT
Trigger: TGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACTT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCTTCCTTGTGGTGGTaGCTCGCGACCGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISSLWW*LATAVA
Trigger: CGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTTCGTTGGTCGACTTaGAAAAGCGAGAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFRWST*KSEKPF
Trigger: AAAAGGCTTCTCGCTTTTGCAAGTCGACCAACGAAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCTCCAGTTTCACCAGTaGGTGCTGCCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPLQFHQ*VLPPGH
Trigger: ATGCCCTGGTGGCAGCACGCACTGGTGAAACTGGAG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACCTGCTCCTTCGCTTaGTCGCGGATCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTCSFA*SRIWTW
Trigger: CCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAAGAATCTCATCTCCTaGTTTCAGGCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATKNLIS*FQAFLG
Trigger: TCCAAGAAAGGCCTGAAAGCAGGAGATGAGATTCTT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCAGCACTGCTGCCCTaGTCGCTGCAAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISALLP*SLQRLC
Trigger: GCACAGCCTTTGCAGCGAGCAGGGCAGCAGTGCTGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCGGTCTCAGCACTGCTaGCCTGCTCGCTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRSQHC*PARCKG
Trigger: GCCTTTGCAGCGAGCAGGGCAGCAGTGCTGAGACCG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCCAAAGCTCGAACCTaGAGCGCTTCCGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIAKART*SASVGI
Trigger: GATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGCTCTCTGGGGAGCTaGAGCACAAGTGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGSLGS*STSERP
Trigger: GGGTCTTTCACTTGTGCTGCAGCTCCCCAGAGAGCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCACTCTTTCTCCGGGCTaGTTGCGGAGACGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPTLSPG*LRRRHQ
Trigger: CTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCCGACAGGGCAGCTTaGTTCTTGAGCTGTGCCATG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPDRAA*FLSCAM
Trigger: CATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGGAGGCTCCCCTCCCTaGCATGTGCAACAGACACAC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIGGSPP*HVQQTH
Trigger: GTGTGTCTGTTGCACATGGCAGGGAGGGGAGCCTCC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCTCCAAGAGCACTGTaGCATTTAGATATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATAPRAL*HLDIEV
Trigger: AACCTCAATATCTAAATGCCACAGTGCTCTTGGAGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCGAGGAAGCGTGCCTaGTCCTCCGCGTCTTGTGCG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPRKRA*SSASCA
Trigger: CGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGGCCCGGCCTGTGGTaGGTGAGTAGCTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRPGLW*VSSWSW
Trigger: CCAACTCCAGCTACTCACCCACCACAGGCCGGGCCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGTGTCTTCCTTGTGGTaGTGCCTCGCGACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIVSSLW*CLATAV
Trigger: CACTGCGGTCGCGAGGCACCACCACAAGGAAGACAC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGCGTGTCTTCCTTGTaGTGGTGCCTCGCGACCGCA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISVSSL*WCLATA
Trigger: TGCGGTCGCGAGGCACCACCACAAGGAAGACACGCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATTCCAAGGCGGCCCATaGCCACTTTCGTTGGTCGAC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQFQGGP*PLSLVD
Trigger: GTCGACCAACGAAAGTGGCCATGGGCCGCCTTGGAA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGCAAAGGCTGTGCCCTaGGTTGCTGGTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPAKAVP*VAGEKG
Trigger: GCCTTTCTCACCAGCAACCCAGGGCACAGCCTTTGC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGAGTCCTGAGGAGATaGGCTCTGGTCAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGVLRR*ALVRGV
Trigger: AACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCCAGCTGAGGCCCCGTaGAGTCCTGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKPAEAP*SPEEMG
Trigger: GCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCAGCTGAGGCCCCGTaGAGTCCTGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPAEAP*SPEEMG
Trigger: GCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCGAGAGTTGTCTCATaGTCGCCAGCTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPRVVS*SPAEAP
Trigger: CGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTGCTCATGGCCGGCCTaGCCCCCTTCAGTGCACACA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLICSWPA*PPSVHT
Trigger: TGTGTGCACTGAAGGGGGCCAGGCCGGCCATGAGCA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAACACTGCCCTGCTCATaGCCGGCCTGGCCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLTLPCS*PAWPPS
Trigger: TGAAGGGGGCCAGGCCGGCCATGAGCAGGGCAGTGT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTTAAAGGTTTGGTTATaGACTGTCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLKVWL*TVREGE
Trigger: TTCCCCTTCCCTGACAGTCCATAACCAAACCTTTAA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCATGGACGTCCCATGCTaGTTTTCCCATGAAAATCTA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATMDVPC*FSHENL
Trigger: TAGATTTTCATGGGAAAACCAGCATGGGACGTCCAT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCTCCAAACACCTGATTaGTGCTTGGCCGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPLQTPD*CLAVPA
Trigger: AGCAGGGACGGCCAAGCATCAATCAGGTGTTTGGAG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGCAGAAGTGGGTACTTaGGGATCCTCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPAEVGT*GSSGWA
Trigger: AGCCCATCCAGAGGATCCTCAAGTACCCACTTCTGC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTGATGGAGGTGGCCTaGAGCCGCTCCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLMEVA*SRSCRS
Trigger: AGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCTCCAGGCCTCCATTaGTCCCCGACAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISPGLH*SPTGQL
Trigger: AAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCTCTACGGGGCAGGTaGCGCAGTCAGATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISLRGR*RSQISV
Trigger: CACTGAGATCTGACTGCGTCACCTGCCCCGTAGAGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCAGCACCTGCCCCCTaGGGTGGCCATCACAGTTTC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISAPAP*GGHHSF
Trigger: GAAACTGTGATGGCCACCGCAGGGGGCAGGTGCTGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGACGATGTCAGCACCTaGCCCCTGCGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVDDVST*PLRWPS
Trigger: TGATGGCCACCGCAGGGGGCAGGTGCTGACATCGTC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTCCCCGAGGAAGCGTaGCTGGTCCTCCGCGTCTTG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVFPEEA*LVLRVL
Trigger: CAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCTCAGTGTCTGGCATaGTCTGCACAGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPQCLA*SAQRLL
Trigger: CAGCAGCCTCTGTGCAGAGCATGCCAGACACTGAGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGCTCAGGGTGCCGCTaGTCTGCTCATCGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSSGCR*SAHRCA
Trigger: CGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTGCTGCCCTGCTCGCTaGAAAGGCTGTGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVCCPAR*KGCALG
Trigger: ACCCAGGGCACAGCCTTTGCAGCGAGCAGGGCAGCA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGCTCGCAGATCACCTTaGGCAGCTTATCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQARRSP*AAYLHP
Trigger: CGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGCGTGGATGAGTGCTaGTGCTTCGGGTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISVDEC*CFGFWA
Trigger: TGCCCAGAACCCGAAGCAGCAGCACTCATCCACGCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGCCAAAGCTCGAACCTaGAGCGCTTCCGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIAKART*SASVGI
Trigger: GATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGTGCACACAATCTTTTaGCTCCAAAAGGGACATATT +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKVHTIF*LQKGHI
Trigger: AATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCAC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCCTGGCCCCCTTCAGTaGACACAATCTTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPPGPLQ*TQSFAS
Trigger: GGAGGCAAAAGATTGTGTGCACTGAAGGGGGCCAGG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCCTCCCAAGAGACTTaGTTGGGGCAGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISSQET*LGQTLP
Trigger: GGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAACTCTTTCTCCGGGCTaGTTGCGGAGACGGCATCAG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNITLSPG*LRRRHQ
Trigger: CTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAGAGT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTGCTGGGGGTGCTGCTaGATCGGGTGCTCACTTCGG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKCWGCC*IGCSLR
Trigger: CCGAAGTGAGCACCCGATCCAGCAGCACCCCCAGCA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCTAGGGTACCATCTTaGGAGAAGGGCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSRVPS*EKGSRP
Trigger: TGGCCTGGAGCCCTTCTCCCAAGATGGTACCCTAGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACTCGGTCCACCCAGATaGGGCTCCCGAAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILGPPR*GSRSLL
Trigger: TAGAAGACTTCGGGAGCCCCATCTGGGTGGACCGAG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAGGCCCGGCCTGTGGTaGGTGAGTAGCTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLRPGLW*VSSWSW
Trigger: CCAACTCCAGCTACTCACCCACCACAGGCCGGGCCT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGACAAAGTCCTTCTTaGGGTGCTCAGGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQRQSPS*GAQAPP
Trigger: AGGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGTGTCTTCCTTGTGGTaGTGCCTCGCGACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIVSSLW*CLATAV
Trigger: CACTGCGGTCGCGAGGCACCACCACAAGGAAGACAC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCAAAGGCTGTGCCCTaGGTTGCTGGTGAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIAKAVP*VAGEKG
Trigger: GCCTTTCTCACCAGCAACCCAGGGCACAGCCTTTGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCCGAGAGTTGTCTCATaGTCGCCAGCTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKPRVVS*SPAEAP
Trigger: CGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCCGAGAGTTGTCTCATaGTCGCCAGCTGAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVPRVVS*SPAEAP
Trigger: CGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCACGTCAAGCTCATCCTaGGTGAGAAAAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATTSSSS*VRKVSF
Trigger: AAAAGAAACTTTTCTCACCCAGGATGAGCTTGACGT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCTGCAGCGCTTCCGTaGGGATCATGTGTCGAAATC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPAALP*GSCVEI
Trigger: GATTTCGACACATGATCCCCACGGAAGCGCTGCAGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCATCCTTTCGGCTCTCTaGGGAGCTGCAGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPILSAL*GAAAQV
Trigger: CACTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGAT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCAAGCTCGAAGCCCTaGAAACCCGAAAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISSSKP*KPERRG
Trigger: CCCCCGCCTTTCGGGTTTCCAGGGCTTCGAGCTTGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCATTGTTTTCAATCCTaGGCTTGCGCTTTATTTTCC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKHCFQS*ACALFS
Trigger: GGAAAATAAAGCGCAAGCCCAGGATTGAAAACAATG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGCACAGAGGCTGCTGTaGGGACGATGCTGCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIAQRLL*GRCCCL
Trigger: TAGACAGCAGCATCGTCCTCACAGCAGCCTCTGTGC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGCTCGCCGTCTCCATaGAAGTGGGCCCATTGGATG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISSPSP*KWAHWM
Trigger: CATCCAATGGGCCCACTTTCATGGAGACGGCGAGCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACTTCCTCCGGGTGGCTaGCTCCACCTTCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILPPGG*LHLLVL
Trigger: AAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACAGAGTGGATGGCGGTaGTCCAGTTTTCAAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIQSGWR*SSFQAP
Trigger: CGGAGCTTGAAAACTGGATCACCGCCATCCACTCTG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGCTGCCACCAGGGCATaGAACGATGATACCGAAAAG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQAATRA*NDDTEK
Trigger: CTTTTCGGTATCATCGTTTCATGCCCTGGTGGCAGC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCCTCTCCAAACACCTaGTTGATGCTTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPSPNT*LMLGRP
Trigger: GGGACGGCCAAGCATCAATCAGGTGTTTGGAGAGGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCGACTCCAGCGTGGATaGGTGCTGCTGCTTCGGGTT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKRLQRG*VLLLRV
Trigger: AACCCGAAGCAGCAGCACTCATCCACGCTGGAGTCG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCGACTCCAGCGTGGATaGGTGCTGCTGCTTCGGGTT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVRLQRG*VLLLRV
Trigger: AACCCGAAGCAGCAGCACTCATCCACGCTGGAGTCG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCAGGTCTCTGTCCACTaGGGCACCCTTCACGGACTC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVQVSVH*GTLHGL
Trigger: GAGTCCGTGAAGGGTGCCTCAGTGGACAGAGACCTG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTCTCCAGGCCTCCATTaGTCCCCGACAGGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSPGLH*SPTGQL
Trigger: AAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAGACTGTTAATGTTTTaGGCATGTTTACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKRLLMF*ACLPCF
Trigger: GAAACAGGGTAAACATGCTCAAAACATTAACAGTCT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACTTCTTTCTCCCTCTaGTTGATGCTTGGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTSFSL*LMLGRP
Trigger: GGGACGGCCAAGCATCAATCAGAGGGAGAAAGAAGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGCTCTGCACAGAGGCTaGTGTGAGGACGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIALHRG*CEDDAA
Trigger: AGCAGCATCGTCCTCACAGCAGCCTCTGTGCAGAGC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGGCATCTTATGGTTTaGAAGATTGGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKWHLMV*KIGNIR
Trigger: TCTGATATTCCCAATCTTGCAAACCATAAGATGCCA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTCAATCCCACTGTCTaGAAACTCACTGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFNPTV*KLTALA
Trigger: GGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGTCTATCCCAGACCTaGCGTCGCTCTCGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGLSQT*RRSRRK
Trigger: TTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGCACCGCCTGCACAATaGTGTTCTCCACCCAGACGG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKAPPAQ*CSPPRR
Trigger: CCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGCACCGCCTGCACAATaGTGTTCTCCACCCAGACGG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLAPPAQ*CSPPRR
Trigger: CCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGTTTCACCAGTGCGTaGTGCCACCAGGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSFTSA*CHQGMK
Trigger: TTTCATGCCCTGGTGGCAGCACGCACTGGTGAAACT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACAGAGAAGAAAACCTaGTCCTTCGCTTGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTEKKT*SFACSR
Trigger: CCGCGAGCAAGCGAAGGAGCAGGTTTTCTTCTCTGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATCAGCACTGCTGCCCTaGTCGCTGCAAAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLSALLP*SLQRLC
Trigger: GCACAGCCTTTGCAGCGAGCAGGGCAGCAGTGCTGA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGTTCCTTTTTCCACTTaGCCAGCGAGGCCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLVPFST*PARPAG
Trigger: ACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAAC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGCCAAAGCTCGAACCTaGAGCGCTTCCGTGGGGATC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLAKART*SASVGI
Trigger: GATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACACGGCATTTGCCTCTaGATCTGCACTCGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIHGICL*ICTRQS
Trigger: GCTTTGGCGAGTGCAGATGCAGAGGCAAATGCCGTG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTGCTTCTTGAGCTGTaGCATGCGGGACGCGTGACT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILLLEL*HAGRVT
Trigger: AGTCACGCGTCCCGCATGGCACAGCTCAAGAAGCAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCATTCTCATCTATTTGTaGCCCTGTATCTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATILIYL*PCISGK
Trigger: TTTACCTGAGATACAGGGGCACAAATAGATGAGAAT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATCCTCTTCCTCCTCCTaGGCTTCAGGTCTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSSSSS*ASGLER
Trigger: CCTTTCTAGACCTGAAGCCCAGGAGGAGGAAGAGGA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGTCAAGATCTCCAAATaGGCCATCTGCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQVKISK*AICRDC
Trigger: GCAGTCCCTGCAGATGGCCCATTTGGAGATCTTGAC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGAACAGCCACAGGGCTaGGGACGATGTCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKEQPQG*GRCQHL
Trigger: CAGGTGCTGACATCGTCCCCAGCCCTGTGGCTGTTC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACTTCGGAGTTCCTGTaGATCACCTTCCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTSEFL*ITFPEE
Trigger: TTCCTCGGGGAAGGTGATCCACAGGAACTCCGAAGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGCTCTCCTCAGTGTCTaGCATGCTCTGCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIALLSV*HALHRG
Trigger: GCCTCTGTGCAGAGCATGCCAGACACTGAGGAGAGC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCAAAGGCCCGGCCTGTaGTGGGTGAGTAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVQRPGL*WVSSWS
Trigger: ACTCCAGCTACTCACCCACCACAGGCCGGGCCTTTG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACAAAGGCCCGGCCTGTaGTGGGTGAGTAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLQRPGL*WVSSWS
Trigger: ACTCCAGCTACTCACCCACCACAGGCCGGGCCTTTG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGCTCTCGCTGTTGGTaGTGCTCATCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGSRCW*CSSPAP
Trigger: GGGAGCTGGAGATGAGCACCACCAACAGCGAGAGCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCAGGCTCTCGCTGTTaGTGGTGCTCATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPGSRC*WCSSPA
Trigger: AGCTGGAGATGAGCACCACCAACAGCGAGAGCCTGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCCACTTCCTCCGGGTaGCTGACTCCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISTSSG*LTPPSC
Trigger: ACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCCAGACGGCGTGTTTaGGGATGCTGTTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPRRRV*GCCCGL
Trigger: TAGACCACAACAGCATCCCCAAACACGCCGTCTGGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGTGGCGCAGGCAGAGTaGATGGCGGTGATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIVAQAE*MAVIQF
Trigger: AAACTGGATCACCGCCATCCACTCTGCCTGCGCCAC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAAGCGAGAAGCCTTTTaGGGTTTGGCAGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIKREAF*GLAAPH
Trigger: GTGGGGAGCTGCCAAACCCCAAAAGGCTTCTCGCTT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGCTTGCTCGCGGATCTaGACATGGCCTGAGTACGTC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIACSRI*TWPEYV
Trigger: GACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAAGCCGTGTCTGTCTTaGCTTTCACCAGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQKPCLS*LSPGPW
Trigger: CCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGAACCGGAGATGATATaGAAAAATGCAGTGATACAA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKEPEMI*KNAVIQ
Trigger: TTGTATCACTGCATTTTTCCATATCATCTCCGGTTC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGTCTCAGTCCACAGTaGTTCTACCATATGACCGTC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGLSPQ*FYHMTV
Trigger: GACGGTCATATGGTAGAATCACTGTGGACTGAGACC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGTCTCAGTCCACAGTaGTTCTACCATATGACCGTC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGLSPQ*FYHMTV
Trigger: GACGGTCATATGGTAGAATCACTGTGGACTGAGACC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATGTCTACGCTGGGAGTaGCAGAAGAGTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQCLRWE*QKSQCK
Trigger: CTTACACTGACTCTTCTGTCACTCCCAGCGTAGACA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTGTCTACGCTGGGAGTaGCAGAAGAGTCAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPCLRWE*QKSQCK
Trigger: CTTACACTGACTCTTCTGTCACTCCCAGCGTAGACA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTTCCTCCGGGTGGCTaGCTCCACCTTCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILPPGG*LHLLVL
Trigger: AAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCAGGGTTGTGCTGGTaGACGTTAGGTAAGACCACT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSGLCW*TLGKTT
Trigger: AGTGGTCTTACCTAACGTTCACCAGCACAACCCTGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCATCCAAGAATGCCTTaGAAGCCGTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPHPRMP*KPCLSW
Trigger: CCAAGACAGACACGGCTTTCAAGGCATTCTTGGATG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCATGTGTCGAAATCTaGAGGGGTCCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSCVEI*RGPSPH
Trigger: ATGAGGACTGGGACCCCTTCAGATTTCGACACATGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGACATATTGCTGGGATaGGGGAAGGCTCTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPDILLG*GKALGF
Trigger: AAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTCTCTACGGGGCAGGTaGCGCAGTCAGATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSLRGR*RSQISV
Trigger: CACTGAGATCTGACTGCGTCACCTGCCCCGTAGAGA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGATTCAGAGCATTATaGCCATGGTACCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGFRAL*PWYQPA
Trigger: GGCTGGTTGGTACCATGGGCATAATGCTCTGAATCC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGTGTCTGGCATGCTCTaGACAGAGGCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKVSGML*TEAAVR
Trigger: CCTCACAGCAGCCTCTGTGCAGAGCATGCCAGACAC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCCTCAGTGTCTGGCATaGTCTGCACAGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKPQCLA*SAQRLL
Trigger: CAGCAGCCTCTGTGCAGAGCATGCCAGACACTGAGG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCATCCCCGTAAAGCCTaGTCTCCTCAGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIHPRKA*SPQCLA
Trigger: TGCCAGACACTGAGGAGAGCAGGCTTTACGGGGATG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACTCCCGCCAGATGTCTaGAGATTTGGAGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQLPPDV*RFGAFL
Trigger: AAGAAACGCTCCAAATCTGCAGACATCTGGCGGGAG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTGCTCAGGCACCGCCTaGACAATGCTGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVCSGTA*TMLFST
Trigger: GGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAAGTCCTTCTTGGGGTaGTCAGGCACCGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKKSFLG*SGTACT
Trigger: TGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACTT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAACCTGCTCCTTCGCTTaGTCGCGGATCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLTCSFA*SRIWTW
Trigger: CCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAACAGAGAAGAAAACCTaGTCCTTCGCTTGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNITEKKT*SFACSR
Trigger: CCGCGAGCAAGCGAAGGAGCAGGTTTTCTTCTCTGT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATCATCTCATGCAAACTaGGGCAAAATGCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSSHAN*GKMRPP
Trigger: AGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGAGGGGTTCATCTCATaGAAACTGCGGCAAAATGCG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQEGFIS*KLRQNA
Trigger: CGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAATCCTTCACGTAGGTaGGCTCCGTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLINPSRR*APSPGA
Trigger: AGCTCCTGGAGACGGAGCGCACCTACGTGAAGGATT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCTGGGCATCCAAGAATaGCTTGAAAGCCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPLGIQE*LESRVC
Trigger: ACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGCTCTCTGGGGAGCTaGAGCACAAGTGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGSLGS*STSERP
Trigger: GGGTCTTTCACTTGTGCTGCAGCTCCCCAGAGAGCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGGCTCTCTGGGGAGCTaGAGCACAAGTGAAAGACCC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLGSLGS*STSERP
Trigger: GGGTCTTTCACTTGTGCTGCAGCTCCCCAGAGAGCC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCTGGCCCCCTTCAGTaGACACAATCTTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPGPLQ*TQSFAS
Trigger: GGAGGCAAAAGATTGTGTGCACTGAAGGGGGCCAGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTCCTCCCAAGAGACTTaGTTGGGGCAGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSSQET*LGQTLP
Trigger: GGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATCCTCCCAAGAGACTTaGTTGGGGCAGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLSSQET*LGQTLP
Trigger: GGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTTCTCCGGGCTGCTTaGGGAGACGGCATCAGAATC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFLRAA*GDGIRI
Trigger: GATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTGCTTCTTGAGCTGTaGCATGCGGGACGCGTGACT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILLLEL*HAGRVT
Trigger: AGTCACGCGTCCCGCATGGCACAGCTCAAGAAGCAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACAGAACCAAGTCAGCTaGCAAAACCGTGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQQNQVS*QNRVCK
Trigger: CTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGAGCATTATGCCCATaGTACCAACCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQRALCP*YQPASS
Trigger: AGAGGAGGCTGGTTGGTACCATGGGCATAATGCTCT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGAGCATTATGCCCATaGTACCAACCAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPRALCP*YQPASS
Trigger: AGAGGAGGCTGGTTGGTACCATGGGCATAATGCTCT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCTAGGGTACCATCTTaGGAGAAGGGCTCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISRVPS*EKGSRP
Trigger: TGGCCTGGAGCCCTTCTCCCAAGATGGTACCCTAGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTATGGTTTGCAAGATTaGGAATATCAGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATYGLQD*EYQTPN
Trigger: ATTTGGTGTCTGATATTCCCAATCTTGCAAACCATA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGTGGCGCAGGCAGAGTaGATGGCGGTGATCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKVAQAE*MAVIQF
Trigger: AAACTGGATCACCGCCATCCACTCTGCCTGCGCCAC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCCCACCCTGAAGGCTaGCTAAATAACAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPHPEG*LNNSGN
Trigger: GTTTCCGCTGTTATTTAGCCAGCCTTCAGGGTGGGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGCTTGCTCGCGGATCTaGACATGGCCTGAGTACGTC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLACSRI*TWPEYV
Trigger: GACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGGAGTCCTGAGGAGATaGGCTCTGGTCAGAGGGGTT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLGVLRR*ALVRGV
Trigger: AACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTGGGAACTTTTGTGTaGCTGGCGCAGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILGTFV*LAQKAL
Trigger: CAGTGCCTTCTGCGCCAGCCACACAAAAGTTCCCAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCTGCAGCGCTTCCGTaGGGATCATGTGTCGAAATC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPAALP*GSCVEI
Trigger: GATTTCGACACATGATCCCCACGGAAGCGCTGCAGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAAAGGGACATATTGCTaGGATGAGGGAAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPKGTYC*DEGRLS
Trigger: CGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGACGGTACAGGAGGGTaGGCAGAGTTAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLDGTGG*AELGQE
Trigger: TTCCTGCCCTAACTCTGCCCACCCTCCTGTACCGTC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGTTGGGTGGCTACATaGCTTCAGAACCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSWVAT*LQNQVS
Trigger: GCTGACTTGGTTCTGAAGCCATGTAGCCACCCAACT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTTTACCCTGTTTCGTTaGCATGAAGAAAGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: GFRTKSAAKTVCARARPKFTLFR*HEESVK
Trigger: TTTAACACTTTCTTCATGCCAACGAAACAGGGTAAA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCCGAGTGTTTTCAGATaGATGTGTTGCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPPSVFR*MCCTGA
Trigger: GGCTCCAGTGCAACACATCCATCTGAAAACACTCGG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGCCCAGCGAGGGCTGTaGGAGGAAATCTTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKAQRGL*EEIFEH
Trigger: ATGCTCAAAGATTTCCTCTCACAGCCCTCGCTGGGC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGTACTCTTGCTGCTGTaGTCAGTCTCATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPVLLLL*SVSSED
Trigger: ATCCTCAGATGAGACTGATCACAGCAGCAAGAGTAC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCATGTGTCGAAATCTaGAGGGGTCCCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISCVEI*RGPSPH
Trigger: ATGAGGACTGGGACCCCTTCAGATTTCGACACATGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCTTGCTCCTCATACTaGGCAAGATCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSCSSY*ARSNCS
Trigger: GGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGGATGTCTGTCTCCTTaGTGTCATCTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQGCLSP*CHLAPH
Trigger: ATGAGGAGCAAGATGACATCAAGGAGACAGACATCC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGGATGTCTGTCTCCTTaGTGTCATCTTGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPGCLSP*CHLAPH
Trigger: ATGAGGAGCAAGATGACATCAAGGAGACAGACATCC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGGCTCATTGAAACATaGATCGCCACCCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRLIET*IATLSS
Trigger: TGAGGAGAGGGTGGCGATTCATGTTTCAATGAGCCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCATGCTGGTTTTCCCATaGAAATCTACGGCCACGTCT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPMLVFP*KSTATS
Trigger: AGACGTGGCCGTAGATTTTCATGGGAAAACCAGCAT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATGCTGCTGGATCGGGTaGTCACTTCGGAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLCCWIG*SLRSSC
Trigger: ACAGGAACTCCGAAGTGAGCACCCGATCCAGCAGCA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTGCTGCTGGATCGGGTaGTCACTTCGGAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKCCWIG*SLRSSC
Trigger: ACAGGAACTCCGAAGTGAGCACCCGATCCAGCAGCA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCATCCCCGTAAAGCCTaGTCTCCTCAGTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVHPRKA*SPQCLA
Trigger: TGCCAGACACTGAGGAGAGCAGGCTTTACGGGGATG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGGAATGCTGCCTCCTaGCTCCCTCAGCCAAATATG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRNAAS*LPQPNM
Trigger: CATATTTGGCTGAGGGAGGCAGGAGGCAGCATTCCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACTCCCGCCAGATGTCTaGAGATTTGGAGCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILPPDV*RFGAFL
Trigger: AAGAAACGCTCCAAATCTGCAGACATCTGGCGGGAG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGATTCCGACAGTAGCCTaGAAATTTGCTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKIPTVA*KFAPRP
Trigger: GGGCCGGGGAGCAAATTTGCAGGCTACTGTCGGAAT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAATTCCGACAGTAGCCTaGAAATTTGCTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLIPTVA*KFAPRP
Trigger: GGGCCGGGGAGCAAATTTGCAGGCTACTGTCGGAAT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCGGCGTGTTTGGGGATaGTGTTGTGGTCTATCCCAG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKRRVWG*CCGLSQ
Trigger: CTGGGATAGACCACAACAGCATCCCCAAACACGCCG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGGTCCATTTGGAACTaGTCGAGATTTTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPRSIWN*SRFCSQ
Trigger: CTGGGAGCAAAATCTCGAGCAGTTCCAAATGGACCT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAATGCTTGGCCGTCCCTaGTTCTTTTTGGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQMLGRP*FFLEVV
Trigger: TACTACCTCCAAAAAGAAGCAGGGACGGCCAAGCAT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGAGGGGTTCATCTCATaGAAACTGCGGCAAAATGCG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIEGFIS*KLRQNA
Trigger: CGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACTTGCGCAGCTTATCTaGATCCGAGAGTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQLAQLI*IRELSH
Trigger: ATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAATCCTTCACGTAGGTaGGCTCCGTCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLNPSRR*APSPGA
Trigger: AGCTCCTGGAGACGGAGCGCACCTACGTGAAGGATT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACTGGGCATCCAAGAATaGCTTGAAAGCCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILGIQE*LESRVC
Trigger: ACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAAAGCAGGTCTCCCATaGTCAGATCTGCAACCTCTT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPKAGLP*SDLQPL
Trigger: AAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCACGGCATTTGCCTCTaGATCTGCACTCGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVHGICL*ICTRQS
Trigger: GCTTTGGCGAGTGCAGATGCAGAGGCAAATGCCGTG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACACGGCATTTGCCTCTaGATCTGCACTCGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLHGICL*ICTRQS
Trigger: GCTTTGGCGAGTGCAGATGCAGAGGCAAATGCCGTG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTCACACACGGCATTTaGCTCTGCATCTGCACTCGC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFTHGI*LCICTR
Trigger: GCGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCAAAAGGGACATATTaGTGGGATGAGGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPKGTY*WDEGRL
Trigger: GAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCTGGCCCCCTTCAGTaGACACAATCTTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPGPLQ*TQSFAS
Trigger: GGAGGCAAAAGATTGTGTGCACTGAAGGGGGCCAGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTTCTCCGGGCTGCTTaGGGAGACGGCATCAGAATC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVFLRAA*GDGIRI
Trigger: GATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGAAGCTGTTTACATCTaGAATGCGACCATCAACCCG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPEAVYI*NATINP
Trigger: CGGGTTGATGGTCGCATTCCAGATGTAAACAGCTTC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGACCTGCCCCCTGCGGTaGCCATCACAGTTTCATCTA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKTCPLR*PSQFHL
Trigger: TAGATGAAACTGTGATGGCCACCGCAGGGGGCAGGT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGCTATGGCTAATTTGTaGGTTGGTGGCACCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPAMANL*VGGTFR
Trigger: TCTGAAGGTGCCACCAACCCACAAATTAGCCATAGC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTGGGGATGCTGTTGTaGTCTATCCCAGACCTGCCG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLGMLL*SIPDLP
Trigger: CGGCAGGTCTGGGATAGACCACAACAGCATCCCCAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCCAGACGGCGTGTTTaGGGATGCTGTTGTGGTCTA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPRRRV*GCCCGL
Trigger: TAGACCACAACAGCATCCCCAAACACGCCGTCTGGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGACAAAGTCCTTCTTaGGGTGCTCAGGCACCGCCT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVRQSPS*GAQAPP
Trigger: AGGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTGGGAACTTTTGTGTaGCTGGCGCAGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILGTFV*LAQKAL
Trigger: CAGTGCCTTCTGCGCCAGCCACACAAAAGTTCCCAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTACTTGAGGATCCTCTaGATGGGCTTGATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPYLRIL*MGLMRY
Trigger: GTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTCCCTGAGCAGAAGTaGGTACTTGAGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILPEQK*VLEDPL
Trigger: CAGAGGATCCTCAAGTACCCACTTCTGCTCAGGGAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTGTTCAGCAATCAGCTaGTCAAACACAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPCSAIS*SNTAPN
Trigger: GTTTGGGGCTGTGTTTGACCAGCTGATTGCTGAACA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGAATGCTGCCAACTCTaGTTCCTTTTTCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPECCQL*FLFPLA
Trigger: GGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGAATGCTGCCAACTCTaGTTCCTTTTTCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQECCQL*FLFPLA
Trigger: GGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCTGCAGCGCTTCCGTaGGGATCATGTGTCGAAATC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPAALP*GSCVEI
Trigger: GATTTCGACACATGATCCCCACGGAAGCGCTGCAGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGATCCTTTCGGCTCTCTaGGGAGCTGCAGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKILSAL*GAAAQV
Trigger: CACTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGAT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTATCCTTTCGGCTCTCTaGGGAGCTGCAGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVILSAL*GAAAQV
Trigger: CACTTGTGCTGCAGCTCCCCAGAGAGCCGAAAGGAT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACAGTGTTCAGTTTCCTaGAGGGGGCAAAGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIQCSVS*RGQSLH
Trigger: GTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCGAGTGTTTTCAGATaGATGTGTTGCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPSVFR*MCCTGA
Trigger: GGCTCCAGTGCAACACATCCATCTGAAAACACTCGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGAGCATCCTCTCATATaGACGTCCCATGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPEHPLI*TSHAGF
Trigger: AAAACCAGCATGGGACGTCCATATGAGAGGATGCTC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
3UTR CAA 72 bp TACAGTCAGAACACGGCAAGCTGTACACATTTCATTTaGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTG +
Preference number: 4 (lower is better)
Translates to: YSQNTASCTHFI*CVKEVSPARRL
Trigger: CAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACAGGGCATGAAACGATaGTACCGAAAAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQQGMKR*YRKDSK
Trigger: CTTGGAATCTTTTCGGTATCATCGTTTCATGCCCTG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGCTGCCACCAGGGCATaGAACGATGATACCGAAAAG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVAATRA*NDDTEK
Trigger: CTTTTCGGTATCATCGTTTCATGCCCTGGTGGCAGC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGATCTGGACATGGCCTaGGTACGTCTTCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVDLDMA*VRLLTP
Trigger: TGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGAACCAGGATGGAGTaGAATACTCGTGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRTRME*NTRGPK
Trigger: TTTGGGTCCACGAGTATTTCACTCCATCCTGGTTCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCATCAGCAGCTGTATCTaGCTTCTCAATGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPISSCI*LLNVDA
Trigger: AGCATCCACATTGAGAAGTCAGATACAGCTGCTGAT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGGCACTGTAGAGCTTaGAGCGGTCAGCATAATACA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRHCRA*SGQHNT
Trigger: TGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGACATATTGCTGGGATaGGGGAAGGCTCTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIDILLG*GKALGF
Trigger: AAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCCCAGCTAGGAGACTaGTTTCAGATAGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPQLGD*FQIEGS
Trigger: CGATCCTTCTATCTGAAATCAGTCTCCTAGCTGGGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGGCTCATTGAAACATaGATCGCCACCCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRLIET*IATLSS
Trigger: TGAGGAGAGGGTGGCGATTCATGTTTCAATGAGCCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGTATATCCTTCGCATaGGCTTGCTGGCCTTTCATA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSISFA*ACWPFI
Trigger: TATGAAAGGCCAGCAAGCTCATGCGAAGGATATACT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCCAGAAAGGGAGAGCTaGAACTGGCAAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPPERES*NWQENK
Trigger: TTTGTTTTCTTGCCAGTTTCAGCTCTCCCTTTCTGG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTGTTTACATCTGGAATaGGACCATCAACCCGCGACG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLICLHLE*DHQPAT
Trigger: CGTCGCGGGTTGATGGTCGCATTCCAGATGTAAACA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAGGAATGCTGCCTCCTaGCTCCCTCAGCCAAATATG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLRNAAS*LPQPNM
Trigger: CATATTTGGCTGAGGGAGGCAGGAGGCAGCATTCCT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTCAATCCCACTGTCTaGAAACTCACTGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVFNPTV*KLTALA
Trigger: GGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGTTCTGTACTCTTGCTaGTGTGATCAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPVLYSC*CDQSHL
Trigger: CAGATGAGACTGATCACAGCAGCAAGAGTACAGAAC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACTTGCGCAGCTTATCTaGATCCGAGAGTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILAQLI*IRELSH
Trigger: ATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTGGGCATCCAAGAATaGCTTGAAAGCCGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILGIQE*LESRVC
Trigger: ACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCAGATCACGGTAGTGTaGAAAAGCAGGTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIQITVV*KSRSPM
Trigger: CATGGGAGACCTGCTTTTGCACACTACCGTGATCTG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATTCACACACGGCATTTaGCTCTGCATCTGCACTCGC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLFTHGI*LCICTR
Trigger: GCGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCACGCAGGATTGAATaGACAGCCTTTAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSRRIE*TAFRKS
Trigger: GGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGGAGCTGTCTTCTGTaGTTATCACGCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQRSCLL*LSRRIE
Trigger: TTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACGATTAGAAGCCTCTaGTTCCGTTTTCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTIRSL*FRFPSG
Trigger: TCCAGATGGAAAACGGAAGCAGAGGCTTCTAATCGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATTCAGATGGATGTGTTaGACTGGAGCCAGTAAATGC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQFRWMC*TGASKC
Trigger: GCATTTACTGGCTCCAGTGCAACACATCCATCTGAA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGTCAAGATCTCCAAATaGGCCATCTGCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLVKISK*AICRDC
Trigger: GCAGTCCCTGCAGATGGCCCATTTGGAGATCTTGAC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGCTTGCGCCCCAGGCTaGCATGCTTTTCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKACAPG*HAFLHK
Trigger: TTTATGGAGAAAAGCATGCCAGCCTGGGGCGCAAGC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCCCACCCTGAAGGCTaGCTAAATAACAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPHPEG*LNNSGN
Trigger: GTTTCCGCTGTTATTTAGCCAGCCTTCAGGGTGGGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATCGCGGATCTGGACATaGCCTGAGTACGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLSRIWT*PEYVFS
Trigger: TGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTCGCGGATCTGGACATaGCCTGAGTACGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSRIWT*PEYVFS
Trigger: TGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGGAGTGAAATACTCGTaGACCCAAATGTCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIGVKYS*TQMSQS
Trigger: TGACTGCGACATTTGGGTCCACGAGTATTTCACTCC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACAGACAGAACCAGGATaGAGTGAAATACTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIQTEPG*SEILVD
Trigger: GTCCACGAGTATTTCACTCCATCCTGGTTCTGTCTG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTGGGAACTTTTGTGTaGCTGGCGCAGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLGTFV*LAQKAL
Trigger: CAGTGCCTTCTGCGCCAGCCACACAAAAGTTCCCAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAAGCCGTGTCTGTCTTaGCTTTCACCAGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKKPCLS*LSPGPW
Trigger: CCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTGCTGCTTCGGGTTCTaGGCATCCAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKCCFGF*ASKNAL
Trigger: CAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTCCCTGAGCAGAAGTaGGTACTTGAGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLPEQK*VLEDPL
Trigger: CAGAGGATCCTCAAGTACCCACTTCTGCTCAGGGAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCTCCCTGAGCAGAAGTaGGTACTTGAGGATCCTCTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKLPEQK*VLEDPL
Trigger: CAGAGGATCCTCAAGTACCCACTTCTGCTCAGGGAG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATGTTCAGCAATCAGCTaGTCAAACACAGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNICSAIS*SNTAPN
Trigger: GTTTGGGGCTGTGTTTGACCAGCTGATTGCTGAACA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAATGACAAAGTTGGGTaGCTACATGGCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPNDKVG*LHGFRT
Trigger: GGTTCTGAAGCCATGTAGCCACCCAACTTTGTCATT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCACATCCGTTAACTCCTaGGGTGATTTGCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPTSVNS*GDLLSS
Trigger: ACTGGAAAGCAAATCACCCCAGGAGTTAACGGATGT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTTCCGTTTTCCATCTaGACGCGATCGAACCGGAGA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLPFSI*TRSNRR
Trigger: TCTCCGGTTCGATCGCGTCCAGATGGAAAACGGAAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACTTCCGTTTTCCATCTaGACGCGATCGAACCGGAGA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLLPFSI*TRSNRR
Trigger: TCTCCGGTTCGATCGCGTCCAGATGGAAAACGGAAG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCTCTGATTGATGCTTaGCCGTCCCTGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPLIDA*PSLLLF
Trigger: AAAAAGAAGCAGGGACGGCCAAGCATCAATCAGAGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTTCATCTAAGTCTGTaGGAATGCGCCAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIFHLSL*ECAKNP
Trigger: GGGGTTTTTGGCGCATTCTCACAGACTTAGATGAAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCCTTCAGAGAGACAGTaGGATTTCCTACAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIPSERQ*DFLQGS
Trigger: ACTTCCCTGTAGGAAATCTCACTGTCTCTCTGAAGG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCTGCATTAACATCCTaGGTTGTTTTAGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPALTS*VVLALL
Trigger: CAGAAGAGCTAAAACAACTCAGGATGTTAATGCAGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATTCCACAGAAGAAAGTaGAAACCCGTAAGTATCAGC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQFHRRK*KPVSIS
Trigger: GCTGATACTTACGGGTTTTCACTTTCTTCTGTGGAA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACAGCAGCACGATTATTaGTCTCAAGAATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQQQHDY*SQESHL
Trigger: GAGATGAGATTCTTGAGATCAATAATCGTGCTGCTG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGTACTCTTGCTGCTGTaGTCAGTCTCATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIVLLLL*SVSSED
Trigger: ATCCTCAGATGAGACTGATCACAGCAGCAAGAGTAC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGGCACTGTAGAGCTTaGAGCGGTCAGCATAATACA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRHCRA*SGQHNT
Trigger: TGTATTATGCTGACCGCTTCAAGCTCTACAGTGCCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACATCCAAGAATGCCTTaGAAGCCGTGTCTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLHPRMP*KPCLSW
Trigger: CCAAGACAGACACGGCTTTCAAGGCATTCTTGGATG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTTTCTGCATCTCATTaGTGTGACTGGCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFSASH*CDWQPC
Trigger: ACAAGGTTGCCAGTCACATCAATGAGATGCAGAAAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGACATATTGCTGGGATaGGGGAAGGCTCTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKDILLG*GKALGF
Trigger: AAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCTTGCTCCTCATACTaGGCAAGATCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISCSSY*ARSNCS
Trigger: GGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCCCAGCTAGGAGACTaGTTTCAGATAGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPQLGD*FQIEGS
Trigger: CGATCCTTCTATCTGAAATCAGTCTCCTAGCTGGGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCAGAACTCAGGCTTTaGTTTCACCTGGCTAAACAA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPELRL*FHLAKQ
Trigger: TTGTTTAGCCAGGTGAAATCAAAGCCTGAGTTCTGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTGTTTACATCTGGAATaGGACCATCAACCCGCGACG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKCLHLE*DHQPAT
Trigger: CGTCGCGGGTTGATGGTCGCATTCCAGATGTAAACA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGGATTCAGAGCATTATaGCCATGGTACCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVGFRAL*PWYQPA
Trigger: GGCTGGTTGGTACCATGGGCATAATGCTCTGAATCC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTCCAAATGGGCCATCTaGAGGGACTGCTCACATACT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSKWAI*RDCSHT
Trigger: AGTATGTGAGCAGTCCCTGCAGATGGCCCATTTGGA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTAGCTCTTCTGCCTTaGATGCTGTTGCTATGGCTA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILALLP*MLLLWL
Trigger: TAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTTCGTTGGTCGACTTaGAAAAGCGAGAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFRWST*KSEKPF
Trigger: AAAAGGCTTCTCGCTTTTGCAAGTCGACCAACGAAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTCATCTCATGCAAACTaGGGCAAAATGCGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSSHAN*GKMRPP
Trigger: AGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAAAGCAGGTCTCCCATaGTCAGATCTGCAACCTCTT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIKAGLP*SDLQPL
Trigger: AAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCAGATCACGGTAGTGTaGAAAAGCAGGTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKQITVV*KSRSPM
Trigger: CATGGGAGACCTGCTTTTGCACACTACCGTGATCTG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGTTTTGAAGACGAATaGTGCCAACTCTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSFEDE*CQLWFL
Trigger: AAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGGAGCTGTCTTCTGTaGTTATCACGCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRSCLL*LSRRIE
Trigger: TTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCAAAAGGGACATATTaGTGGGATGAGGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPKGTY*WDEGRL
Trigger: GAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACAGAACCAAGTCAGCTaGCAAAACCGTGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLQNQVS*QNRVCK
Trigger: CTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAACGATTAGAAGCCTCTaGTTCCGTTTTCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNITIRSL*FRFPSG
Trigger: TCCAGATGGAAAACGGAAGCAGAGGCTTCTAATCGT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACATATGGACGTCCCATaGTGGTTTTCCCATGAAAAT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQHMDVP*WFSHEN
Trigger: ATTTTCATGGGAAAACCAGCATGGGACGTCCATATG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCAGGTCTAGAAAGGTaGGTCTCAGTCCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISGLER*VSVHSD
Trigger: ATCACTGTGGACTGAGACCCACCTTTCTAGACCTGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTCAGCAGCAGCTGGTaGCATCTTATGGTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFSSSW*HLMVCK
Trigger: CTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCATGGCCACTTTCGTTaGTCGACTTGCAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKHGHFR*STCKSE
Trigger: CTCGCTTTTGCAAGTCGACCAACGAAAGTGGCCATG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACATGGCCACTTTCGTTaGTCGACTTGCAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLHGHFR*STCKSE
Trigger: CTCGCTTTTGCAAGTCGACCAACGAAAGTGGCCATG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGAACTTTTGTGTGGCTaGCGCAGAAGGCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKELLCG*RRRHCR
Trigger: TCTACAGTGCCTTCTGCGCCAGCCACACAAAAGTTC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGAACTTTTGTGTGGCTaGCGCAGAAGGCACTGTAGA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVELLCG*RRRHCR
Trigger: TCTACAGTGCCTTCTGCGCCAGCCACACAAAAGTTC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTACTTGAGGATCCTCTaGATGGGCTTGATGAGGTAC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIYLRIL*MGLMRY
Trigger: GTACCTCATCAAGCCCATCCAGAGGATCCTCAAGTA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCCAGTCCTCATAAATaGAAAGCCTGTGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPSPHK*KACEIL
Trigger: TAGGATCTCACAGGCTTTCCATTTATGAGGACTGGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAAAGGGACATATTGCTaGGATGAGGGAAGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLKGTYC*DEGRLS
Trigger: CGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACAGTGTTCAGTTTCCTaGAGGGGGCAAAGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLQCSVS*RGQSLH
Trigger: GTGAAGACTTTGCCCCCTCCAGGAAACTGAACACTG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGGAGATTCTCAGACATaGAAGAGGGAAGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIGDSQT*KREGYS
Trigger: ACTGTACCCTTCCCTCTTCCATGTCTGAGAATCTCC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCCGAGTGTTTTCAGATaGATGTGTTGCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKPSVFR*MCCTGA
Trigger: GGCTCCAGTGCAACACATCCATCTGAAAACACTCGG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCAAAGGCTAAACTGTaGACCAGAACTCAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISKAKL*TRTQAL
Trigger: CAAAGCCTGAGTTCTGGTCCACAGTTTAGCCTTTGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTCGTGCTCTACATGTTaGCTTTCTGCGTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSCSTC*LSAFPM
Trigger: CATGGGAAACGCAGAAAGTCAACATGTAGAGCACGA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGAACCAGGATGGAGTaGAATACTCGTGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVRTRME*NTRGPK
Trigger: TTTGGGTCCACGAGTATTTCACTCCATCCTGGTTCT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTCCACAGAAGAAAGTaGAAACCCGTAAGTATCAGC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIFHRRK*KPVSIS
Trigger: GCTGATACTTACGGGTTTTCACTTTCTTCTGTGGAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACAGCAGCACGATTATTaGTCTCAAGAATCTCATCTC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIQQHDY*SQESHL
Trigger: GAGATGAGATTCTTGAGATCAATAATCGTGCTGCTG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGTATATCCTTCGCATaGGCTTGCTGGCCTTTCATA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLISISFA*ACWPFI
Trigger: TATGAAAGGCCAGCAAGCTCATGCGAAGGATATACT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGAGGCACAAGAGCATaGTGTACTGAACTCTCTATT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRGTRA*CTELSI
Trigger: AATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTGTTCTGTACTCAGATaGAGTGTTCGATACATAGAG +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPCSVLR*SVRYIE
Trigger: CTCTATGTATCGAACACTTCATCTGAGTACAGAACA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTCTTGTTCTTCTTGTaGACCAGGAAGTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIFLFFL*TRKFLT
Trigger: CGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGATGCTTGGCCGTCCCTaGTTCTTTTTGGAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKMLGRP*FFLEVV
Trigger: TACTACCTCCAAAAAGAAGCAGGGACGGCCAAGCAT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTTGCGCAGCTTATCTaGATCCGAGAGTTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLAQLI*IRELSH
Trigger: ATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAAAGCAGGTCTCCCATaGTCAGATCTGCAACCTCTT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVKAGLP*SDLQPL
Trigger: AAGAGGTTGCAGATCTGAGCATGGGAGACCTGCTTT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATTTGAAGACGAATGCTaGCAACTCTGGTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQFEDEC*QLWFLF
Trigger: AAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGTTTTGAAGACGAATaGTGCCAACTCTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISFEDE*CQLWFL
Trigger: AAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGGAGCTGTCTTCTGTaGTTATCACGCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRSCLL*LSRRIE
Trigger: TTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGAAGCTGTTTACATCTaGAATGCGACCATCAACCCG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKEAVYI*NATINP
Trigger: CGGGTTGATGGTCGCATTCCAGATGTAAACAGCTTC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGAGTGAAATACTCGTaGACCCAAATGTCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGVKYS*TQMSQS
Trigger: TGACTGCGACATTTGGGTCCACGAGTATTTCACTCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCAGACAGAACCAGGATaGAGTGAAATACTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVQTEPG*SEILVD
Trigger: GTCCACGAGTATTTCACTCCATCCTGGTTCTGTCTG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGTCTTCCTCGGGCTGTaGAACATAGAGCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKVFLGL*NIELHF
Trigger: AAAATGCAGCTCTATGTTCCACAGCCCGAGGAAGAC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGAGATTCTCAGACATaGAAGAGGGAAGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGDSQT*KREGYS
Trigger: ACTGTACCCTTCCCTCTTCCATGTCTGAGAATCTCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAATGTACAAGAGACAATaGCACCCTCTCCAAGCACCA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLMYKRQ*HPLQAP
Trigger: TGGTGCTTGGAGAGGGTGCCATTGTCTCTTGTACAT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTTCATCTAAGTCTGTaGGAATGCGCCAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVFHLSL*ECAKNP
Trigger: GGGGTTTTTGGCGCATTCTCACAGACTTAGATGAAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACAGGGCATGAAACGATaGTACCGAAAAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLQGMKR*YRKDSK
Trigger: CTTGGAATCTTTTCGGTATCATCGTTTCATGCCCTG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAATCAGCAGCTGTATCTaGCTTCTCAATGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLISSCI*LLNVDA
Trigger: AGCATCCACATTGAGAAGTCAGATACAGCTGCTGAT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGAGGCACAAGAGCATaGTGTACTGAACTCTCTATT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRGTRA*CTELSI
Trigger: AATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGACATAGACACGTCATaGCCTTATGTACAAGAGACA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIDIDTS*PYVQET
Trigger: TGTCTCTTGTACATAAGGTCATGACGTGTCTATGTC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCCAAGATTTCTTCGTTaGTTGTTAAATGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPPRFLR*LLNVLG
Trigger: GCCAAGAACATTTAACAAGCAACGAAGAAATCTTGG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCAAGATTTCTTCGTTaGTTGTTAAATGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPRFLR*LLNVLG
Trigger: GCCAAGAACATTTAACAAGCAACGAAGAAATCTTGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATTAGCTCTTCTGCCTTaGATGCTGTTGCTATGGCTA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLLALLP*MLLLWL
Trigger: TAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGTTCTGTACTCTTGCTaGTGTGATCAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKVLYSC*CDQSHL
Trigger: CAGATGAGACTGATCACAGCAGCAAGAGTACAGAAC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCTGTTCTGTACTCTTaGTGCTGTGATCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPVLYS*CCDQSH
Trigger: ATGAGACTGATCACAGCAGCAAGAGTACAGAACAGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTTGAAGACGAATGCTaGCAACTCTGGTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIFEDEC*QLWFLF
Trigger: AAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAATTCTCATCTATTTGTaGCCCTGTATCTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQILIYL*PCISGK
Trigger: TTTACCTGAGATACAGGGGCACAAATAGATGAGAAT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTACGATTAGAAGCCTCTaGTTCCGTTTTCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVTIRSL*FRFPSG
Trigger: TCCAGATGGAAAACGGAAGCAGAGGCTTCTAATCGT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTTCAGATGGATGTGTTaGACTGGAGCCAGTAAATGC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKFRWMC*TGASKC
Trigger: GCATTTACTGGCTCCAGTGCAACACATCCATCTGAA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTCAGATGGATGTGTTaGACTGGAGCCAGTAAATGC +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVFRWMC*TGASKC
Trigger: GCATTTACTGGCTCCAGTGCAACACATCCATCTGAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGCTTTCAGGCCTTTCTTaGAAGCTAAACCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKLSGLS*KLNRFP
Trigger: AGGAAACCGGTTTAGCTTCCAAGAAAGGCCTGAAAG...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTTTCAGGCCTTTCTTaGAAGCTAAACCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLSGLS*KLNRFP
Trigger: AGGAAACCGGTTTAGCTTCCAAGAAAGGCCTGAAAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCCCAGTCCTCATAAATaGAAAGCCTGTGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVPSPHK*KACEIL
Trigger: TAGGATCTCACAGGCTTTCCATTTATGAGGACTGGG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAATGACAAAGTTGGGTaGCTACATGGCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLNDKVG*LHGFRT
Trigger: GGTTCTGAAGCCATGTAGCCACCCAACTTTGTCATT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAATGACAAAGTTGGGTaGCTACATGGCTTCAGAACC +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKNDKVG*LHGFRT
Trigger: GGTTCTGAAGCCATGTAGCCACCCAACTTTGTCATT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGACATCCGTTAACTCCTaGGGTGATTTGCTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKTSVNS*GDLLSS
Trigger: ACTGGAAAGCAAATCACCCCAGGAGTTAACGGATGT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTCTGTTTAAAGGTTTaGTTATGGACTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFCLKV*LWTVRE
Trigger: TTCCCTGACAGTCCATAACCAAACCTTTAAACAGAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGAACCGGAGATGATATaGAAAAATGCAGTGATACAA +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQEPEMI*KNAVIQ
Trigger: TTGTATCACTGCATTTTTCCATATCATCTCCGGTTC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTTTTCTGCATCTCATTaGTGTGACTGGCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKFSASH*CDWQPC
Trigger: ACAAGGTTGCCAGTCACATCAATGAGATGCAGAAAA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTTTCTGCATCTCATTaGTGTGACTGGCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVFSASH*CDWQPC
Trigger: ACAAGGTTGCCAGTCACATCAATGAGATGCAGAAAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAGACTGTTAATGTTTTaGGCATGTTTACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIRLLMF*ACLPCF
Trigger: GAAACAGGGTAAACATGCTCAAAACATTAACAGTCT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGAGGCACAAGAGCATaGTGTACTGAACTCTCTATT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVRGTRA*CTELSI
Trigger: AATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGACATAGACACGTCATaGCCTTATGTACAAGAGACA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKDIDTS*PYVQET
Trigger: TGTCTCTTGTACATAAGGTCATGACGTGTCTATGTC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATTCTTGTTCTTCTTGTaGACCAGGAAGTTCTTGACG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLFLFFL*TRKFLT
Trigger: CGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTTCTTTCTCCCTCTTaGCATCTGGAACAATGTCAT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLLSPS*HLEQCH
Trigger: ATGACATTGTTCCAGATGGCAAGAGGGAGAAAGAAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAAGAATCTCATCTCCTaGTTTCAGGCCTTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKKNLIS*FQAFLG
Trigger: TCCAAGAAAGGCCTGAAAGCAGGAGATGAGATTCTT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR GCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTTGAAGACGAATGCTaGCAACTCTGGTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFEDEC*QLWFLF
Trigger: AAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGTTTTGAAGACGAATaGTGCCAACTCTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSFEDE*CQLWFL
Trigger: AAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAATTCTCATCTATTTGTaGCCCTGTATCTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIILIYL*PCISGK
Trigger: TTTACCTGAGATACAGGGGCACAAATAGATGAGAAT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGCTCCAAGAGCACTGTaGCATTTAGATATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLAPRAL*HLDIEV
Trigger: AACCTCAATATCTAAATGCCACAGTGCTCTTGGAGC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTTGTTAAATGTTCTTaGCTCAGATCAGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLILVKCS*LRSESE
Trigger: CTCACTCTCTGATCTGAGCCAAGAACATTTAACAAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATATGGTTTGCAAGATTaGGAATATCAGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQYGLQD*EYQTPN
Trigger: ATTTGGTGTCTGATATTCCCAATCTTGCAAACCATA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTTAAAGGTTTGGTTATaGACTGTCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLKVWL*TVREGE
Trigger: TTCCCCTTCCCTGACAGTCCATAACCAAACCTTTAA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATTAAAGGTTTGGTTATaGACTGTCAGGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLLKVWL*TVREGE
Trigger: TTCCCCTTCCCTGACAGTCCATAACCAAACCTTTAA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTCTGTTTAAAGGTTTaGTTATGGACTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIFCLKV*LWTVRE
Trigger: TTCCCTGACAGTCCATAACCAAACCTTTAAACAGAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTTACCCTGTTTCGTTaGCATGAAGAAAGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFTLFR*HEESVK
Trigger: TTTAACACTTTCTTCATGCCAACGAAACAGGGTAAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGGCTTTGATTTCACCTaGCTAAACAACAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIGFDFT*LNNKSS
Trigger: GGAACTTTTGTTGTTTAGCCAGGTGAAATCAAAGCC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGTGCACACAATCTTTTaGCTCCAAAAGGGACATATT +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKVHTIF*LQKGHI
Trigger: AATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCAC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGTGCACACAATCTTTTaGCTCCAAAAGGGACATATT +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLVHTIF*LQKGHI
Trigger: AATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCAC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTTCTGCGTTTCCCATaGTTTTATGGTCTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFLRFP*FYGLKR
Trigger: CCTTTTAAGACCATAAAACCATGGGAAACGCAGAAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACTTGTTAAATGTTCTTaGCTCAGATCAGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLLVKCS*LRSESE
Trigger: CTCACTCTCTGATCTGAGCCAAGAACATTTAACAAG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTCCCTCTTGCCATCTaGAACAATGTCATCAAATAT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLPLAI*NNVIKY
Trigger: ATATTTGATGACATTGTTCCAGATGGCAAGAGGGAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR CCA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTACGTCAAGCTCATCCTaGGTGAGAAAAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVTSSSS*VRKVSF
Trigger: AAAAGAAACTTTTCTCACCCAGGATGAGCTTGACGT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR TCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAGACTGTTAATGTTTTaGGCATGTTTACCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLRLLMF*ACLPCF
Trigger: GAAACAGGGTAAACATGCTCAAAACATTAACAGTCT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR GCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTGGCATCTTATGGTTTaGAAGATTGGGAATATCAGA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKWHLMV*KIGNIR
Trigger: TCTGATATTCCCAATCTTGCAAACCATAAGATGCCA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTTTCTGCGTTTCCCATaGTTTTATGGTCTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKFLRFP*FYGLKR
Trigger: CCTTTTAAGACCATAAAACCATGGGAAACGCAGAAA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CCA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTTCTGTTTAAAGGTTTaGTTATGGACTGTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKFCLKV*LWTVRE
Trigger: TTCCCTGACAGTCCATAACCAAACCTTTAAACAGAA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTTACCCTGTTTCGTTaGCATGAAGAAAGTGTTAAA +
Preference number: 4 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFTLFR*HEESVK
Trigger: TTTAACACTTTCTTCATGCCAACGAAACAGGGTAAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CCA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGAACCGGAGATGATATaGAAAAATGCAGTGATACAA +
Preference number: 4 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLEPEMI*KNAVIQ
Trigger: TTGTATCACTGCATTTTTCCATATCATCTCCGGTTC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 90 bp GTGCGGCGGTCAGCAGGATGTCCGACTGGCCCGGAGAGCTCAGGGTaGCGCTGCTCTGCTCATCGCTGTGCGCCGAGCCGGCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: VRRSAGCPTGPESSG*RCSAHRCAPSRPPP
Trigger: TGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCTGACCGCCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp CCCGCCGGAAGTTCTCGTACACCCCCTGACGAGCCGCATCCCCGGTaGAGCTGCTGCCGCTGTCGCTGCCCACAAAGGCCCGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PAGSSRTPPDEPHPR*SCCRCRCPQRPGLW
Trigger: CCACAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACTTCCGGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp AAGGCGAGGGGGCTCTCGCCAAGGTCGGCAGGGCCGTCCACTCGGTaGGGCGGGCTTTCCAGCAGCTCCACTCCTTCCTCCAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: KARGLSPRSAGPSTR*GGLSSSSTPSSSSG
Trigger: CCCCGAGCTGGAGGAAGGAGTGGAGCTGCTGGAAAGCCCGCCCCACCGAGTGGACGGCCCTGCCGACCTTGGCGAGAGCCCCCTCGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 90 bp CCCCCTGACGAGCCGCATCCCCGGTGGAGCTGCTGCCGCTGTCGCTaGCCACAAAGGCCCGGCCTGTGGTGGGTGAGTAGCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: PPDEPHPRWSCCRCR*PQRPGLWWVSSWSW
Trigger: CCAACTCCAGCTACTCACCCACCACAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp GACTGGCCCGGAGAGCTCAGGGTGCCGCTGCTCTGCTCATCGCTGTaGGCCGAGCCGGCCTCCTCCAGGCTCTCGCTGTTGGTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: DWPGELRVPLLCSSL*AEPASSRLSLLVVL
Trigger: GAGCACCACCAACAGCGAGAGCCTGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp CGGTCAGCAGGATGTCCGACTGGCCCGGAGAGCTCAGGGTGCCGCTaGTCTGCTCATCGCTGTGCGCCGAGCCGGCCTCCTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: RSAGCPTGPESSGCR*SAHRCAPSRPPPGS
Trigger: AGAGCCTGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCTGACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp GAAGTTCTTGACGGCCAGGGCGCCGGCCTTGCGCACCGTGCCCTGTaGGGCGGTCAGCAGGATGTCCGACTGGCCCGGAGAGCTCAGGGT +
Preference number: 5 (lower is better)
Translates to: EVLDGQGAGLAHRAL*GGQQDVRLARRAQG
Trigger: ACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp GCCTTGCGCACCGTGCCCTGTGCGGCGGTCAGCAGGATGTCCGACTaGCCCGGAGAGCTCAGGGTGCCGCTGCTCTGCTCATCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ALRTVPCAAVSRMSD*PGELRVPLLCSSLC
Trigger: GCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 90 bp GTGGTGCTCATCTCCAGCTCCCGCCGGAAGTTCTCGTACACCCCCTaGCGAGCCGCATCCCCGGTGGAGCTGCTGCCGCTGTCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VVLISSSRRKFSYTP*RAASPVELLPLSLP
Trigger: GGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACTTCCGGCGGGAGCTGGAGATGAGCACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp GGAAGTTCTCGTACACCCCCTGACGAGCCGCATCCCCGGTGGAGCTaGTGCCGCTGTCGCTGCCCACAAAGGCCCGGCCTGTGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GSSRTPPDEPHPRWS*CRCRCPQRPGLWWV
Trigger: CACCCACCACAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp TGGATCACCTTCCCCGAGGAAGCGTGCCTGGTCCTCCGCGTCTTGTaGGAGAGGCGCAGGGAGCGGGAAGTGTGCTTGCGCCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: WITFPEEACLVLRVL*ERRREREVCLRPRL
Trigger: CAGCCTGGGGCGCAAGCACACTTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 90 bp AGTTCTCGTACACCCCCTGACGAGCCGCATCCCCGGTGGAGCTGCTaGCGCTGTCGCTGCCCACAAAGGCCCGGCCTGTGGTGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SSRTPPDEPHPRWSC*RCRCPQRPGLWWVS
Trigger: ACTCACCCACCACAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp GTGCTCACTTCGGAGTTCCTGTGGATCACCTTCCCCGAGGAAGCGTaGCTGGTCCTCCGCGTCTTGTGCGAGAGGCGCAGGGAGCGGGAA +
Preference number: 5 (lower is better)
Translates to: VLTSEFLWITFPEEA*LVLRVLCERRRERE
Trigger: TTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACAGGAACTCCGAAGTGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 90 bp CCACGTCTCAACGCAGCAAGGACAGCGACGGTGAGACCCCGGAGCTaGACTCGCTTCCCACCAGTGCCCTCTGGGAAGCTGTCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: PRLNAARTATVRPRS*TRFPPVPSGKLSKA
Trigger: AGCCTTTGACAGCTTCCCAGAGGGCACTGGTGGGAAGCGAGTGCAGCTCCGGGGTCTCACCGTCGCTGTCCTTGCTGCGTTGAGACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 90 bp TCACTTCGGAGTTCCTGTGGATCACCTTCCCCGAGGAAGCGTGCCTaGTCCTCCGCGTCTTGTGCGAGAGGCGCAGGGAGCGGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: SLRSSCGSPSPRKRA*SSASCARGAGSGKC
Trigger: ACACTTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACAGGAACTCCGAAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 90 bp ATGCTGGGGGTGCTGCTGGATCGGGTGCTCACTTCGGAGTTCCTGTaGATCACCTTCCCCGAGGAAGCGTGCCTGGTCCTCCGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: MLGVLLDRVLTSEFL*ITFPEEACLVLRVL
Trigger: CAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACAGGAACTCCGAAGTGAGCACCCGATCCAGCAGCACCCCCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS TCA 90 bp GGGACGCGTGACTATCCAGGGTTTTCCGGCCTCTTTCCCGCTGACTaGTGGAGGTGGCCTGAAGCCGCTCCTGCAGGTCTCTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: GTRDYPGFSGLFPAD*WRWPEAAPAGLCPL
Trigger: CAGTGGACAGAGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTCACGCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 90 bp GCGCTCCGTCTCCAGGAGCTCGCAGATCACCTTGCGCAGCTTATCTaGATCCGAGAGTTGTCTCATGGTCGCCAGCTGAGGCCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: ALRLQELADHLAQLI*IRELSHGRQLRPRG
Trigger: TCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp TCTGAGCATACAAGTCACCCAAGGAATTGGCTCTCTGACAGGTGCTaGGCTGCCGCGGACTCGCCCGCGTTTCCATCCCCCGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SEHTSHPRNWLSDRC*AAADSPAFPSPEPP
Trigger: AGGAGGCTCGGGGGATGGAAACGCGGGCGAGTCCGCGGCAGCTCAGCACCTGTCAGAGAGCCAATTCCTTGGGTGACTTGTATGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 90 bp ATGAAAATCTACGGCCACGTCTCAACGCAGCAAGGACAGCGACGGTaGGACCCCGGAGCTGCACTCGCTTCCCACCAGTGCCCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: MKIYGHVSTQQGQRR*DPGAALASHQCPLG
Trigger: TCCCAGAGGGCACTGGTGGGAAGCGAGTGCAGCTCCGGGGTCTCACCGTCGCTGTCCTTGCTGCGTTGAGACGTGGCCGTAGATTTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS GCA 90 bp TTCCACTTCCTCCGGGTGGCTGACTCCACCTTCTTGTTCTTCTTGTaGACCAGGAAGTTCTTGACGGCCAGGGCGCCGGCCTTGCGCACC +
Preference number: 5 (lower is better)
Translates to: FHFLRVADSTFLFFL*TRKFLTARAPALRT
Trigger: GGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp CAGGCACCGCCTGCACAATGCTGTTCTCCACCCAGACGGCGTGTTTaGGGATGCTGTTGTGGTCTATCCCAGACCTGCCGTCGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: QAPPAQCCSPPRRRV*GCCCGLSQTCRRSR
Trigger: ACGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp TCTTCCTTGTGGTGGTGCCTCGCGACCGCAGTGGCGCAGGCAGAGTaGATGGCGGTGATCCAGTTTTCAAGCTCCGTCTGGCTAGTGGTC +
Preference number: 5 (lower is better)
Translates to: SSLWWCLATAVAQAE*MAVIQFSSSVWLVV
Trigger: GACCACTAGCCAGACGGAGCTTGAAAACTGGATCACCGCCATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGCACCAGGAAGTTCTaGACGGCCAGGGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCTRKF*TARAPA
Trigger: GGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 90 bp GTGTCCCGTGCAGTGTCGCCTGGCCGGACGACCGTCAGGGCAGGCTaGTTATTGGGCAGACAGAACCAGGATGGAGTGAAATACTCGTGG +
Preference number: 5 (lower is better)
Translates to: VSRAVSPGRTTVRAG*LLGRQNQDGVKYSW
Trigger: CCACGAGTATTTCACTCCATCCTGGTTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 90 bp TTGATCTCTGATTTCAGGAGTCGGAGCGTGTCTTCCTTGTGGTGGTaGCTCGCGACCGCAGTGGCGCAGGCAGAGTGGATGGCGGTGATC +
Preference number: 5 (lower is better)
Translates to: LISDFRSRSVSSLWW*LATAVAQAEWMAVI
Trigger: GATCACCGCCATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGACACGCTCCGACTCCTGAAATCAGAGATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp CAGGCCTCCATTGATCCCCGACAGGGCAGCTTGCTTCTTGAGCTGTaGCATGCGGGACGCGTGACTATCCAGGGTTTTCCGGCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QASIDPRQGSLLLEL*HAGRVTIQGFPASF
Trigger: GAAAGAGGCCGGAAAACCCTGGATAGTCACGCGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp CGCAGATCACCTTGCGCAGCTTATCTGCATCCGAGAGTTGTCTCATaGTCGCCAGCTGAGGCCCCGTGGAGTCCTGAGGAGATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRSPCAAYLHPRVVS*SPAEAPWSPEEMGS
Trigger: AGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp GTACAGCTTGCAAATCAGCTCCAGGGTGTCCCGTGCAGTGTCGCCTaGCCGGACGACCGTCAGGGCAGGCTGATTATTGGGCAGACAGAA +
Preference number: 5 (lower is better)
Translates to: VQLANQLQGVPCSVA*PDDRQGRLIIGQTE
Trigger: TTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGGGACACCCTGGAGCTGATTTGCAAGCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCGGAGCGTGTCTTCCTaGTGGTGGTGCCTCGCGACC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATRSVSS*WWCLAT
Trigger: GGTCGCGAGGCACCACCACAAGGAAGACACGCTCCG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGGTTCCTTTTTCCACTaGCCCAGCGAGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATGSFFH*PSEAGG
Trigger: CCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp TTTTTGATCTCTGATTTCAGGAGTCGGAGCGTGTCTTCCTTGTGGTaGTGCCTCGCGACCGCAGTGGCGCAGGCAGAGTGGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: FLISDFRSRSVSSLW*CLATAVAQAEWMAV
Trigger: CACCGCCATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGACACGCTCCGACTCCTGAAATCAGAGATCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp ATGTGTCTTGCAAATCAGCTCCAGGGTGTCCCGTGCAGTGTCGCCTaGCCGGACGACCGTCAGGGCAGGCTGATTATTGGGCAGACAGAA +
Preference number: 5 (lower is better)
Translates to: MCLANQLQGVPCSVA*PDDRQGRLIIGQTE
Trigger: TTCTGTCTGCCCAATAATCAGCCTGCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGGGACACCCTGGAGCTGATTTGCAAGACACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCTCTCCAGGCCTCCATaGATCCCCGACAGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATLSRPP*IPDRAA
Trigger: AGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp TGCGGCCACCTGTTCTGTACTCTTGCTGCTGTGATCAGTCTCATCTaGGGATTCCAAGTCTGGCCCCTCGGTCTCCTCTGGAGCGGTCTC +
Preference number: 5 (lower is better)
Translates to: CGHLFCTLAAVISLI*GFQVWPLGLLWSGL
Trigger: GAGACCGCTCCAGAGGAGACCGAGGGGCCAGACTTGGAATCCTCAGATGAGACTGATCACAGCAGCAAGAGTACAGAACAGGTGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 90 bp ACTGATGGAGGTGGCCTGAAGCCGCTCCTGCAGGTCTCTGTCCACTaGGGCACCCTTCACGGACTCACAGAACTCATCATCGTCACTGAG +
Preference number: 5 (lower is better)
Translates to: TDGGGLKPLLQVSVH*GTLHGLTELIIVTE
Trigger: CTCAGTGACGATGATGAGTTCTGTGAGTCCGTGAAGGGTGCCTCAGTGGACAGAGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 90 bp CCGCCTGCACAATGCTGTTCTCCACCCAGACGGCGTGTTTGGGGATaGTGTTGTGGTCTATCCCAGACCTGCCGTCGCTCTCGTAGAAAA +
Preference number: 5 (lower is better)
Translates to: PPAQCCSPPRRRVWG*CCGLSQTCRRSRRK
Trigger: TTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp CACACGGCATTTGCCTCTGCATCTGCACTCGCCAAAGCTCGAACCTaGAGCGCTTCCGTGGGGATCATGTGTCGAAATCTGAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: HTAFASASALAKART*SASVGIMCRNLKGS
Trigger: GGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGCGAGTGCAGATGCAGAGGCAAATGCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000286827.7
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp TTGTCTCATGGTCGCCAGCTGAGGCCCCGTGGAGTCCTGAGGAGATaGGCTCTGGTCAGAGGGGTTCATCTCATGCAAACTGCGGCAAAA +
Preference number: 5 (lower is better)
Translates to: LSHGRQLRPRGVLRR*ALVRGVHLMQTAAK
Trigger: TTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp TATCTGCATCCGAGAGTTGTCTCATGGTCGCCAGCTGAGGCCCCGTaGAGTCCTGAGGAGATGGGCTCTGGTCAGAGGGGTTCATCTCAT +
Preference number: 5 (lower is better)
Translates to: YLHPRVVSWSPAEAP*SPEEMGSGQRGSSH
Trigger: ATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCCCAAGAGACTTGCTaGGGGCAGACACTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSQETC*GQTLPC
Trigger: GCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCCTCCCAAGAGACTaGCTTGGGGCAGACACTGCC +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLLPRD*LGADTA
Trigger: GGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGGGCAGCTTGCTTCTaGAGCTGTGCCATGCGGGAC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATRAACF*SCAMRD
Trigger: GTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCCCCGACAGGGCAGCTaGCTTCTTGAGCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKPRQGS*LLELCH
Trigger: ATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp GAAGAAAACCTGCTCCTTCGCTTGCTCGCGGATCTGGACATGGCCTaGGTACGTCTTCTCACTCCAGTTTCACCAGTGCGTGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: EENLLLRLLADLDMA*VRLLTPVSPVRAAT
Trigger: GGTGGCAGCACGCACTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTTTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp GTAAAGCCTGCTCTCCTCAGTGTCTGGCATGCTCTGCACAGAGGCTaGTGTGAGGACGATGCTGCTGTCTACGCTGGGAGTGACAGAAGA +
Preference number: 5 (lower is better)
Translates to: VKPALLSVWHALHRG*CEDDAAVYAGSDRR
Trigger: TCTTCTGTCACTCCCAGCGTAGACAGCAGCATCGTCCTCACAGCAGCCTCTGTGCAGAGCATGCCAGACACTGAGGAGAGCAGGCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 90 bp AGAAGACAAAGTCCTTCTTGGGGTGCTCAGGCACCGCCTGCACAATaGTGTTCTCCACCCAGACGGCGTGTTTGGGGATGCTGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: RRQSPSWGAQAPPAQ*CSPPRRRVWGCCCG
Trigger: ACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 90 bp GGACAGGAGGTCCGTGTCGGTAGTGGCCCCTTCAATCCCACTGTCTaGAAACTCACTGCCCTCGCCTGCATTAACATCCCCATTGGAAAC +
Preference number: 5 (lower is better)
Translates to: GQEVRVGSGPFNPTV*KLTALACINIPIGN
Trigger: GTTTCCAATGGGGATGTTAATGCAGGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAAGGGGCCACTACCGACACGGACCTCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469412.5
CDS CCA 90 bp TGTAAGACACAGGTCTCAAGCCCATGTCCACTCGGTCCACCCAGATaGGGCTCCCGAAGTCTTCTAGGGTACCATCTTGGGAGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: CKTQVSSPCPLGPPR*GSRSLLGYHLGRRA
Trigger: AGCCCTTCTCCCAAGATGGTACCCTAGAAGACTTCGGGAGCCCCATCTGGGTGGACCGAGTGGACATGGGCTTGAGACCTGTGTCTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 90 bp GCTGAGACAGCCTCTCCAGAAAGAGGATGTGTCTGCAACCCGACTTaGCAAATGAGGGAGGAGCTCACCAGCCAAAAGGAGAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: AETASPERGCVCNPT*QMREELTSQKEKGG
Trigger: GCCTCCCTTCTCCTTTTGGCTGGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGCTGTCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAACCTGCTCCTTCGCTaGCTCGCGGATCTGGACATG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATNLLLR*LADLDM
Trigger: CATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTTTCTCCGGGCTGCTaGCGGAGACGGCATCAGAAT +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLSPGC*RRRHQN
Trigger: ATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp CAGCCTCTCCAGAAAGAGGATGTGTCTGCAACCCGACTTGGCAAATaGGGGAGGAGCTCACCAGCCAAAAGGAGAAGGGAGGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: QPLQKEDVSATRLGK*GRSSPAKRRREAKG
Trigger: TCCCTTTGCCTCCCTTCTCCTTTTGGCTGGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS GCA 90 bp CCCAGACGGCGTGTTTGGGGATGCTGTTGTGGTCTATCCCAGACCTaGCGTCGCTCTCGTAGAAAAATAGCGTGCATCCTTTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: PRRRVWGCCCGLSQT*RRSRRKIACILSGT
Trigger: TGTCCCTGAAAGGATGCACGCTATTTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp CAAATATGTAGCGTCATCCCCGTAAAGCCTGCTCTCCTCAGTGTCTaGCATGCTCTGCACAGAGGCTGCTGTGAGGACGATGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: QICSVIPVKPALLSV*HALHRGCCEDDAAV
Trigger: GACAGCAGCATCGTCCTCACAGCAGCCTCTGTGCAGAGCATGCCAGACACTGAGGAGAGCAGGCTTTACGGGGATGACGCTACATATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 90 bp GACCCCACAGAGAAGAAAACCTGCTCCTTCGCTTGCTCGCGGATCTaGACATGGCCTGAGTACGTCTTCTCACTCCAGTTTCACCAGTGC +
Preference number: 5 (lower is better)
Translates to: DPTEKKTCSFACSRI*TWPEYVFSLQFHQC
Trigger: GCACTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTTTTCTTCTCTGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAGCTCGCAGATCACCTaGCGCAGCTTATCTGCATCC +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSSQIT*RSLSAS
Trigger: GGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGATCCTCTGGATGGGCTaGATGAGGTACGACTCCAGC +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKILWMG*MRYDSS
Trigger: GCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGAT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGCAGAAGTGGGTACTaGAGGATCCTCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATSRSGY*RILWMG
Trigger: GCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCACCTTGTTCATGGTCTaGATGGCCACGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATTLFMV*MATSRW
Trigger: CCACCTGGACGTGGCCATCAAGACCATGAACAAGGT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGGAAGGCTCTCGGTTTaGAGGAGCTGTCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATGRLSV*RSCLLC
Trigger: GCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGGGAAGGCTCTCGGTTTaGAGGAGCTGTCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKGRLSV*RSCLLC
Trigger: GCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCC...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp CCGTCAGGGCAGGCTGATTATTGGGCAGACAGAACCAGGATGGAGTaGAATACTCGTGGACCCAAATGTCGCAGTCAGGGTTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PSGQADYWADRTRME*NTRGPKCRSQGCAG
Trigger: ACCAGCACAACCCTGACTGCGACATTTGGGTCCACGAGTATTTCACTCCATCCTGGTTCTGTCTGCCCAATAATCAGCCTGCCCTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 90 bp AGCTGGCTGTCATGCAAAGCAGCGACTCTCATTCTGCAAGCAGGCTaGGACAGCCTCTCCAGAAAGAGGATGTGTCTGCAACCCGACTTG +
Preference number: 5 (lower is better)
Translates to: SWLSCKAATLILQAG*DSLSRKRMCLQPDL
Trigger: CAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGCTGTCTCAGCCTGCTTGCAGAATGAGAGTCGCTGCTTTGCATGACAGCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS GCA 90 bp GGACAGGAGGTCCGTGTCGGTAGTGGCCCCTTCAATCCCACTGTCTaGAAACTCACTGCCCTCGCCTGCATTAACATCCTGAGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: GQEVRVGSGPFNPTV*KLTALACINILSCF
Trigger: AAAACAACTCAGGATGTTAATGCAGGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAAGGGGCCACTACCGACACGGACCTCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 90 bp CCTGAGGAGATGGGCTCTGGTCAGAGGGGTTCATCTCATGCAAACTaGGGCAAAATGCGGCCACCTGTTCTGTACTCTTGCTGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: PEEMGSGQRGSSHAN*GKMRPPVLYSCCCD
Trigger: ATCACAGCAGCAAGAGTACAGAACAGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 90 bp TTCTGCAAGCAGGCTGAGACAGCCTCTCCAGAAAGAGGATGTGTCTaGAACCCGACTTGGCAAATGAGGGAGGAGCTCACCAGCCAAAAG +
Preference number: 5 (lower is better)
Translates to: FCKQAETASPERGCV*NPTWQMREELTSQK
Trigger: CTTTTGGCTGGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGCTGTCTCAGCCTGCTTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS CCA 90 bp ACAGAGAAGAAAACCTGCTCCTTCGCTTGCTCGCGGATCTGGACATaGCCTGAGTACGTCTTCTCACTCCAGTTTCACCAGTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: TEKKTCSFACSRIWT*PEYVFSLQFHQCVL
Trigger: CAGCACGCACTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTTTTCTTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCTGACTCCACCTTCTaGTTCTTCTTGTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATADSTF*FFLCTR
Trigger: CCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTGTTTGGGGATGCTGTaGTGGTCTATCCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKCLGML*WSIPDL
Trigger: CAGGTCTGGGATAGACCACAACAGCATCCCCAAACA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCGTCCCTGCTTCTTTTaGGAGGTAGTATCCAGACCC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATRPCFF*EVVSRP
Trigger: GGGTCTGGATACTACCTCCAAAAAGAAGCAGGGACG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTTTCACACACGGCATTaGCCTCTGCATCTGCACTCG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATFHTRH*PLHLHS
Trigger: CGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAAA...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTTTCACACACGGCATTaGCCTCTGCATCTGCACTCG +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKFHTRH*PLHLHS
Trigger: CGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAAA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp TCCTTTCAGGGACACCCAGTAGTGCTTCCACTTCCTCCGGGTGGCTaGCTCCACCTTCTTGTTCTTCTTGTGCACCAGGAAGTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: SFQGHPVVLPLPPGG*LHLLVLLVHQEVLD
Trigger: GTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCACTACTGGGTGTCCCTGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 90 bp TGGATGAGTGCTGCTGCTTCGGGTTCTGGGCATCCAAGAATGCCTTaGAAGCCGTGTCTGTCTTGGCTTTCACCAGGACCTTGGGAACTT +
Preference number: 5 (lower is better)
Translates to: WMSAAASGSGHPRMP*KPCLSWLSPGPWEL
Trigger: AAGTTCCCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCAGCACTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp GAAGAGAGCATCCTCTCATATGGACGTCCCATGCTGGTTTTCCCATaGAAATCTACGGCCACGTCTCAACGCAGCAAGGACAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: EESILSYGRPMLVFP*KSTATSQRSKDSDG
Trigger: ACCGTCGCTGTCCTTGCTGCGTTGAGACGTGGCCGTAGATTTTCATGGGAAAACCAGCATGGGACGTCCATATGAGAGGATGCTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS GCA 90 bp CGCCTCCTAGCTCTGAAGAGAGCATCCTCTCATATGGACGTCCCATaGTGGTTTTCCCATGAAAATCTACGGCCACGTCTCAACGCAGCA +
Preference number: 5 (lower is better)
Translates to: RLLALKRASSHMDVP*WFSHENLRPRLNAA
Trigger: TGCTGCGTTGAGACGTGGCCGTAGATTTTCATGGGAAAACCAGCATGGGACGTCCATATGAGAGGATGCTCTCTTCAGAGCTAGGAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS GCA 90 bp CCTGAGGAGATGGGCTCTGGTCAGAGGGGTTCATCTCATGCAAACTaGGGCAAAATGCGGCCACCTGTTCTGTACTCAGATGAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PEEMGSGQRGSSHAN*GKMRPPVLYSDEVF
Trigger: GAACACTTCATCTGAGTACAGAACAGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 90 bp AGAGCATTATGCCCATGGTACCAACCAGCCTCCTCTTCCTCCTCCTaGGCTTCAGGTCTAGAAAGGTGGGTCTCAGTCCACAGTGATTCT +
Preference number: 5 (lower is better)
Translates to: RALCPWYQPASSSSS*ASGLERWVSVHSDS
Trigger: AGAATCACTGTGGACTGAGACCCACCTTTCTAGACCTGAAGCCCAGGAGGAGGAAGAGGAGGCTGGTTGGTACCATGGGCATAATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000469412.5
ENST00000541036.5
CDS CCA 90 bp TGCATCCTTTCAGGGACACCCAGTAGTGCTTCCACTTCCTCCGGGTaGCTGACTCCACCTTCTTGTTCTTCTTGTGCACCAGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: CILSGTPSSASTSSG*LTPPSCSSCAPGSS
Trigger: AGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCACTACTGGGTGTCCCTGAAAGGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGTTGCTATGGCTAATTaGTGGGTTGGTGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATVAMAN*WVGGTF
Trigger: GAAGGTGCCACCAACCCACAAATTAGCCATAGCAAC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCATCCAAGAATGCCTaGAAAGCCGTGTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATASKNA*KAVSVL
Trigger: CAAGACAGACACGGCTTTCAAGGCATTCTTGGATGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGGACCACAGCAGTTTaGAAGACGAATGCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATRTTAV*KTNAAN
Trigger: GTTGGCAGCATTCGTCTTCAAAACTGCTGTGGTCCT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp AAGCTCGAACCTGCAGCGCTTCCGTGGGGATCATGTGTCGAAATCTaGAGGGGTCCCAGTCCTCATAAATGGAAAGCCTGTGAGATCCTA +
Preference number: 5 (lower is better)
Translates to: KLEPAALPWGSCVEI*RGPSPHKWKACEIL
Trigger: TAGGATCTCACAGGCTTTCCATTTATGAGGACTGGGACCCCTTCAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp AGAGTTAGGGCAGGAAGTATCTACACACATTCTCTACGGGGCAGGTaGCGCAGTCAGATCTCAGTGTTCAGTTTCCTGGAGGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RVRAGSIYTHSLRGR*RSQISVFSFLEGAK
Trigger: CTTTGCCCCCTCCAGGAAACTGAACACTGAGATCTGACTGCGTCACCTGCCCCGTAGAGAATGTGTGTAGATACTTCCTGCCCTAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp GTGATTCTACCGCTGCTCAACAAGGCGCGCACGTTTCTCCCCGTCTaGCTTCACATGTCCCAAACTTCCAGTAACAGAAATGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: VILPLLNKARTFLPV*LHMSQTSSNRNEEA
Trigger: TGCTTCCTCATTTCTGTTACTGGAAGTTTGGGACATGTGAAGCCAGACGGGGAGAAACGTGCGCGCCTTGTTGAGCAGCGGTAGAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455508.1
CDS CCA 90 bp CTCCTAGCTCTGAAGAGAGCATCCTCTCATATGGACGTCCCATGCTaGTTTTCCCATGAAAATCTACGGCCACGTCTCAACGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: LLALKRASSHMDVPC*FSHENLRPRLNAAR
Trigger: CCTTGCTGCGTTGAGACGTGGCCGTAGATTTTCATGGGAAAACCAGCATGGGACGTCCATATGAGAGGATGCTCTCTTCAGAGCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCGTGCTCTACATGTaGACTTTCTGCGTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLVLYM*TFCVSH
Trigger: ATGGGAAACGCAGAAAGTCAACATGTAGAGCACGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGAACTGCTCGAGATTTaGCTCCCAGACAAAGATCTG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATELLEI*LPDKDL
Trigger: CAGATCTTTGTCTGGGAGCAAAATCTCGAGCAGTTC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTTTCGTTGGTCGACTaGCAAAAGCGAGAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLSLVD*QKREAF
Trigger: AAAGGCTTCTCGCTTTTGCAAGTCGACCAACGAAAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGGTTCCTTTTTCCACTaGCCCAGCGAGGCCGGCGGG +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIGSFFH*PSEAGG
Trigger: CCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGCTTATCACGCAGGATaGAATGCACAGCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATAYHAG*NAQPLG
Trigger: TCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCCTCCTTGATGTCATCTaGCTCCTCATACTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATLLDVI*LLILSK
Trigger: CTTGCTCAGTATGAGGAGCAAGATGACATCAAGGAG...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCTCCTTGATGTCATCTaGCTCCTCATACTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKLLDVI*LLILSK
Trigger: CTTGCTCAGTATGAGGAGCAAGATGACATCAAGGAG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCAGGATGTCTGTCTCCTaGATGTCATCTTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATRMSVS*MSSCSS
Trigger: TGAGGAGCAAGATGACATCAAGGAGACAGACATCCT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCTCTCCAGGCCTCCATaGATCCCCGACAGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPLSRPP*IPDRAA
Trigger: AGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 90 bp TCGGTTTTGAGGAGCTGTCTTCTGTGCTTATCACGCAGGATTGAATaGACAGCCTTTAGGAAATCCTTTCGGCTCTCTGGGGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SVLRSCLLCLSRRIE*TAFRKSFRLSGELQ
Trigger: CTGCAGCTCCCCAGAGAGCCGAAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCTCAAAACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGAGCGGGAAGTGTGCTaGCGCCCCAGGCTGGCATGC +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKEREVC*RPRLAC
Trigger: GCATGCCAGCCTGGGGCGCAAGCACACTTCCCGCTC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTGCACCAGGAAGTTCTaGACGGCCAGGGCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVCTRKF*TARAPA
Trigger: GGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGGGCAGCTTGCTTCTaGAGCTGTGCCATGCGGGAC +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQRAACF*SCAMRD
Trigger: GTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCCCGACAGGGCAGCTaGCTTCTTGAGCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPRQGS*LLELCH
Trigger: ATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCATTTCTTTGTACAGCTaGCAAATCAGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATISLYS*QISSRV
Trigger: CACCCTGGAGCTGATTTGCAAGCTGTACAAAGAAAT...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541036.5
CDS TCA 90 bp GTGAAATACTCGTGGACCCAAATGTCGCAGTCAGGGTTGTGCTGGTaGACGTTAGGTAAGACCACTTCTTTCTCCCTCTTGCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: VKYSWTQMSQSGLCW*TLGKTTSFSLLPSG
Trigger: TCCAGATGGCAAGAGGGAGAAAGAAGTGGTCTTACCTAACGTTCACCAGCACAACCCTGACTGCGACATTTGGGTCCACGAGTATTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS TCA 90 bp TCACTGAGGATGTCTGTCTCCTTGATGTCATCTTGCTCCTCATACTaGGCAAGATCAAACTGCTCCTCTACCCATCGGTCAGTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SLRMSVSLMSSCSSY*ARSNCSSTHRSVSP
Trigger: TGGGGACACTGACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGATGACATCAAGGAGACAGACATCCTCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGCAGATGTCTGCAGATTaGGAGCGTTTCTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKQMSAD*ERFFLK
Trigger: CTTTAAGAAGAAACGCTCCAAATCTGCAGACATCTG...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCCAGGCTCTCGCTGTaGGTGGTGCTCATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISRLSL*VVLISS
Trigger: GCTGGAGATGAGCACCACCAACAGCGAGAGCCTGGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACCCAGACGGCGTGTTaGGGGATGCTGTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTQTAC*GMLLWS
Trigger: AGACCACAACAGCATCCCCAAACACGCCGTCTGGGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCACCCAGACGGCGTGTTaGGGGATGCTGTTGTGGTCT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPTQTAC*GMLLWS
Trigger: AGACCACAACAGCATCCCCAAACACGCCGTCTGGGT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAAGACAAAGTCCTTCTaGGGGTGCTCAGGCACCGCC +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPKTKSF*GCSGTA
Trigger: GGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCTT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACGGAGCGTGTCTTCCTaGTGGTGGTGCCTCGCGACC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLRSVSS*WWCLAT
Trigger: GGTCGCGAGGCACCACCACAAGGAAGACACGCTCCG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAACCTGCTCCTTCGCTaGCTCGCGGATCTGGACATG +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPNLLLR*LADLDM
Trigger: CATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAGCAGAATGATCCAGTaGATGTGTCTTGCAAATCAG +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSRMIQ*MCLANQ
Trigger: CTGATTTGCAAGACACATCAACTGGATCATTCTGCT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACTCCTCCCAAGAGACTaGCTTGGGGCAGACACTGCC +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILLPRD*LGADTA
Trigger: GGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGAGGAG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTCTCCAGGCCTCCATaGATCCCCGACAGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLILSRPP*IPDRAA
Trigger: AGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp ACATGGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCGTTCTGTTTAAAGGTTaGGTTATGGACTGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: TWLQNQVSCQNRVCKSATVLFKG*VMDCQG
Trigger: TCCCTGACAGTCCATAACCAAACCTTTAAACAGAAC...GGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 90 bp TGCTGGGATGAGGGAAGGCTCTCGGTTTTGAGGAGCTGTCTTCTGTaGTTATCACGCAGGATTGAATGCACAGCCTTTAGGAAATCCTTT +
Preference number: 5 (lower is better)
Translates to: CWDEGRLSVLRSCLL*LSRRIECTAFRKSF
Trigger: AAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS CCA 90 bp AAAAGGCAACAGTGGTCCCCAGCCCAACTTGCTCCAAGAGCACTGTaGCATTTAGATATTGAGGTTGGAAATGATGTCCGGATGAACAGC +
Preference number: 5 (lower is better)
Translates to: KRQQWSPAQLAPRAL*HLDIEVGNDVRMNS
Trigger: GCTGTTCATCCGGACATCATTTCCAACCTCAATATCTAAATGCCACAGTGCTCTTGGAGCAAGTTGGGCTGGGGACCACTGTTGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAAGACAAAGTCCTTCTaGGGGTGCTCAGGCACCGCC +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIKTKSF*GCSGTA
Trigger: GGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCTT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAGGCTGTGCCCTGGGTaGCTGGTGAGAAAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLRLCPG*LVRKAR
Trigger: CCTCGCCTTTCTCACCAGCAACCCAGGGCACAGCCT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAATCTGCATCCGAGAGTaGTCTCATGGTCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQICIRE*SHGRQL
Trigger: CAGCTGGCGACCATGAGACAACTCTCGGATGCAGAT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGCTCGCAGATCACCTaGCGCAGCTTATCTGCATCC +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQSSQIT*RSLSAS
Trigger: GGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGGACCTTGGGAACTTTaGTGTGGCTGGCGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIGPWEL*CGWRRR
Trigger: CCTTCTGCGCCAGCCACACAAAAGTTCCCAAGGTCC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCACCTTGTTCATGGTCTaGATGGCCACGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPTLFMV*MATSRW
Trigger: CCACCTGGACGTGGCCATCAAGACCATGAACAAGGT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCCCAAGAGACTTGCTaGGGGCAGACACTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLISQETC*GQTLPC
Trigger: GCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCCTAAGGGGACATTCTaGTCGACGGTACAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPPKGTF*STVQEG
Trigger: ACCCTCCTGTACCGTCGACAAGAATGTCCCCTTAGG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACCTAAGGGGACATTCTaGTCGACGGTACAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQPKGTF*STVQEG
Trigger: ACCCTCCTGTACCGTCGACAAGAATGTCCCCTTAGG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGAAAATTCTCATCTATTaGTGCCCCTGTATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKKILIY*CPCISG
Trigger: ACCTGAGATACAGGGGCACAAATAGATGAGAATTTT...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 90 bp CCTCCTCGCAGTCCTTCTCTTCGGCGGAACCCAAGATTTCTTCGTTaGTTGTTAAATGTTCTTGGCTCAGATCAGAGAGTGAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: PPRSPSLRRNPRFLR*LLNVLGSDQRVRIP
Trigger: TGGAATTCTCACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAGAAATCTTGGGTTCCGCCGAAGAGAAGGACTGCGAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 90 bp TGTTTTAGCTCTTCTGCCTTGCATGCTGTTGCTATGGCTAATTTGTaGGTTGGTGGCACCTTCAGAGAGACAGTGAGATTTCCTACAGGG +
Preference number: 5 (lower is better)
Translates to: CFSSSALHAVAMANL*VGGTFRETVRFPTG
Trigger: CCCTGTAGGAAATCTCACTGTCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATCCAGGCTCTCGCTGTaGGTGGTGCTCATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLSRLSL*VVLISS
Trigger: GCTGGAGATGAGCACCACCAACAGCGAGAGCCTGGA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGCTGACTCCACCTTCTaGTTCTTCTTGTGCACCAGG +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQADSTF*FFLCTR
Trigger: CCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAAAGCGAGAAGCCTTTaGGGGTTTGGCAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIKARSL*GFGSSP
Trigger: TGGGGAGCTGCCAAACCCCAAAAGGCTTCTCGCTTT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTTCACACACGGCATTaGCCTCTGCATCTGCACTCG +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFHTRH*PLHLHS
Trigger: CGAGTGCAGATGCAGAGGCAAATGCCGTGTGTGAAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTCCCAAGAGACTTGCTaGGGGCAGACACTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSQETC*GQTLPC
Trigger: GCAGGGCAGTGTCTGCCCCAAGCAAGTCTCTTGGGA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAGGGCAGCTTGCTTCTaGAGCTGTGCCATGCGGGAC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLRAACF*SCAMRD
Trigger: GTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACCCCGACAGGGCAGCTaGCTTCTTGAGCTGTGCCAT +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLPRQGS*LLELCH
Trigger: ATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GGCTTCAGAACCAAGTCAGCTGCCAAAACCGTGTGTGCAAGAGCGCGACCTAAGTCAGGCCCTGATTTATaGAGAATAAATAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: GFRTKSAAKTVCARARPKSGPDL*RINKSP
Trigger: AGGGCTTTTATTTATTCTCAATAAATCAGGGCCTGA...CTTAGGTCGCGCTCTTGCACACACGGTTTTGGCAGCTGACTTGGTTCTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 90 bp CTGGGAAGCTGTCAAAGGCTAAACTGTGGACCAGAACTCAGGCTTTaGTTTCACCTGGCTAAACAACAAAAGTTCCAGAAAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: LGSCQRLNCGPELRL*FHLAKQQKFQKGRA
Trigger: AGCTCTCCCTTTCTGGAACTTTTGTTGTTTAGCCAGGTGAAATCAAAGCCTGAGTTCTGGTCCACAGTTTAGCCTTTGACAGCTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 90 bp GAGTCTCTTCAGCAGCAGCTGGTGGCATCTTATGGTTTGCAAGATTaGGAATATCAGACACCAAATTCCGACAGTAGCCTGCAAATTTGC +
Preference number: 5 (lower is better)
Translates to: ESLQQQLVASYGLQD*EYQTPNSDSSLQIC
Trigger: GCAAATTTGCAGGCTACTGTCGGAATTTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAAGAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAGCGCCAAAAACCCCATaGGAAACAGAAGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQAPKTP*ETEEAL
Trigger: CAAAGCCTCTTCTGTTTCCAATGGGGTTTTTGGCGC...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAATGGCTAATTTGTGGGTaGGTGGCACCTTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQWLICG*VAPSER
Trigger: TCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCA...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCATCACCCAGGGAATaGCTGAGGCAGAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIASPRE*LRQKTK
Trigger: CTTTGTCTTCTGCCTCAGCAATTCCCTGGGTGATGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACCATGGCCACTTTCGTaGGTCGACTTGCAAAAGCGA +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIPWPLS*VDLQKR
Trigger: TCGCTTTTGCAAGTCGACCAACGAAAGTGGCCATGG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTATCTGCATCCGAGAGTaGTCTCATGGTCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIICIRE*SHGRQL
Trigger: CAGCTGGCGACCATGAGACAACTCTCGGATGCAGAT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGGACCTTGGGAACTTTaGTGTGGCTGGCGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKGPWEL*CGWRRR
Trigger: CCTTCTGCGCCAGCCACACAAAAGTTCCCAAGGTCC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGGACCTTGGGAACTTTaGTGTGGCTGGCGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLGPWEL*CGWRRR
Trigger: CCTTCTGCGCCAGCCACACAAAAGTTCCCAAGGTCC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGCAGAAGTGGGTACTaGAGGATCCTCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLISRSGY*RILWMG
Trigger: GCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGGACCACAGCAGTTTaGAAGACGAATGCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPRTTAV*KTNAAN
Trigger: GTTGGCAGCATTCGTCTTCAAAACTGCTGTGGTCCT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGGAAGGCTCTCGGTTTaGAGGAGCTGTCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIGRLSV*RSCLLC
Trigger: GCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTTTCTCCGGGCTGCTaGCGGAGACGGCATCAGAAT +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLSPGC*RRRHQN
Trigger: ATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACTTTCTCCGGGCTGCTaGCGGAGACGGCATCAGAAT +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLLSPGC*RRRHQN
Trigger: ATTCTGATGCCGTCTCCGCAAGCAGCCCGGAGAAAG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCTCGTGCTCTACATGTaGACTTTCTGCGTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPLVLYM*TFCVSH
Trigger: ATGGGAAACGCAGAAAGTCAACATGTAGAGCACGAG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAAAGCGAGAAGCCTTTaGGGGTTTGGCAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKKARSL*GFGSSP
Trigger: TGGGGAGCTGCCAAACCCCAAAAGGCTTCTCGCTTT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCGTCCCTGCTTCTTTTaGGAGGTAGTATCCAGACCC +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIRPCFF*EVVSRP
Trigger: GGGTCTGGATACTACCTCCAAAAAGAAGCAGGGACG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCTTTCAGGCCTTTCTaGGAAGCTAAACCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIAFRPF*EAKPVS
Trigger: GGAAACCGGTTTAGCTTCCAAGAAAGGCCTGAAAGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAATCTGCATCCGAGAGTaGTCTCATGGTCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLICIRE*SHGRQL
Trigger: CAGCTGGCGACCATGAGACAACTCTCGGATGCAGAT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAAGCTCGCAGATCACCTaGCGCAGCTTATCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLSSQIT*RSLSAS
Trigger: GGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAATCCTCTGGATGGGCTaGATGAGGTACGACTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLILWMG*MRYDSS
Trigger: GCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGAT...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGATCCTCTGGATGGGCTaGATGAGGTACGACTCCAGC +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKILWMG*MRYDSS
Trigger: GCTGGAGTCGTACCTCATCAAGCCCATCCAGAGGAT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGCAGAAGTGGGTACTaGAGGATCCTCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVSRSGY*RILWMG
Trigger: GCCCATCCAGAGGATCCTCAAGTACCCACTTCTGCT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTACCTTGTTCATGGTCTaGATGGCCACGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVTLFMV*MATSRW
Trigger: CCACCTGGACGTGGCCATCAAGACCATGAACAAGGT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGGATGTCTGTCTCCTaGATGTCATCTTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPRMSVS*MSSCSS
Trigger: TGAGGAGCAAGATGACATCAAGGAGACAGACATCCT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCACCTTCTTGTTCTTCTaGTGCACCAGGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPTFLFF*CTRKFL
Trigger: CAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTATGTTTGGGGATGCTGTaGTGGTCTATCCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLCLGML*WSIPDL
Trigger: CAGGTCTGGGATAGACCACAACAGCATCCCCAAACA...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGCATCACCCAGGGAATaGCTGAGGCAGAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLASPRE*LRQKTK
Trigger: CTTTGTCTTCTGCCTCAGCAATTCCCTGGGTGATGC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAACGAAACAGGTCCATTaGGAACTGCTCGAGATTTTG +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQTKQVH*ELLEIL
Trigger: CAAAATCTCGAGCAGTTCCAAATGGACCTGTTTCGT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCCATGGCCACTTTCGTaGGTCGACTTGCAAAAGCGA +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVPWPLS*VDLQKR
Trigger: TCGCTTTTGCAAGTCGACCAACGAAAGTGGCCATGG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAGCTTATCACGCAGGATaGAATGCACAGCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIAYHAG*NAQPLG
Trigger: TCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGC...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCACCGGACTTGTCATaGTTTTCAATCCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISPDLS*FSILGL
Trigger: CAAGCCCAGGATTGAAAACAATGACAAGTCCGGTGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 90 bp AAGTGTGTTATAATTACTGTACGGAGGAGTCTCTTCAGCAGCAGCTaGTGGCATCTTATGGTTTGCAAGATTGGGAATATCAGACACCAA +
Preference number: 5 (lower is better)
Translates to: KCVIITVRRSLFSSS*WHLMVCKIGNIRHQ
Trigger: TTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAAGAGACTCCTCCGTACAGTAATTATAACACACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTGCGCCAAAAACCCCATaGGAAACAGAAGAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVAPKTP*ETEEAL
Trigger: CAAAGCCTCTTCTGTTTCCAATGGGGTTTTTGGCGC...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACAGATGTCTGCAGATTaGGAGCGTTTCTTCTTAAAG +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQQMSAD*ERFFLK
Trigger: CTTTAAGAAGAAACGCTCCAAATCTGCAGACATCTG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCGTGGCATCTTATGGTTaGCAAGATTGGGAATATCAG +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPVASYG*QDWEYQ
Trigger: CTGATATTCCCAATCTTGCAAACCATAAGATGCCAC...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTTGGCTAATTTGTGGGTaGGTGGCACCTTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVWLICG*VAPSER
Trigger: TCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCA...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGTTGCTATGGCTAATTaGTGGGTTGGTGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLVAMAN*WVGGTF
Trigger: GAAGGTGCCACCAACCCACAAATTAGCCATAGCAAC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTCTGCCTTGCATGCTGTaGCTATGGCTAATTTGTGGG +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVLPCML*LWLICG
Trigger: CCCACAAATTAGCCATAGCAACAGCATGCAAGGCAG...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTACTGCCTTGCATGCTGTaGCTATGGCTAATTTGTGGG +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLLPCML*LWLICG
Trigger: CCCACAAATTAGCCATAGCAACAGCATGCAAGGCAG...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTTAGCTCTTCTGCCTaGCATGCTGTTGCTATGGCT +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIFSSSA*HAVAMA
Trigger: AGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTTTCGTTGGTCGACTaGCAAAAGCGAGAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLILSLVD*QKREAF
Trigger: AAAGGCTTCTCGCTTTTGCAAGTCGACCAACGAAAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGCTTTCAGGCCTTTCTaGGAAGCTAAACCGGTTTCC +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLAFRPF*EAKPVS
Trigger: GGAAACCGGTTTAGCTTCCAAGAAAGGCCTGAAAGC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGCATCCAAGAATGCCTaGAAAGCCGTGTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKASKNA*KAVSVL
Trigger: CAAGACAGACACGGCTTTCAAGGCATTCTTGGATGC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGGACCACAGCAGTTTaGAAGACGAATGCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKRTTAV*KTNAAN
Trigger: GTTGGCAGCATTCGTCTTCAAAACTGCTGTGGTCCT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGTGCACACAATCTTTaGCCTCCAAAAGGGACATAT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSAHNL*PPKGTY
Trigger: ATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCACT...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCTCCTTGATGTCATCTaGCTCCTCATACTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLILLDVI*LLILSK
Trigger: CTTGCTCAGTATGAGGAGCAAGATGACATCAAGGAG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTTTTCAATCCTGGGCTaGCGCTTTATTTTCCACAGT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPFSILG*RFIFHS
Trigger: ACTGTGGAAAATAAAGCGCAAGCCCAGGATTGAAAA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 90 bp TGTGTTATAATTACTGTACGGAGGAGTCTCTTCAGCAGCAGCTGGTaGCATCTTATGGTTTGCAAGATTGGGAATATCAGACACCAAATT +
Preference number: 5 (lower is better)
Translates to: CVIITVRRSLFSSSW*HLMVCKIGNIRHQI
Trigger: AATTTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAAGAGACTCCTCCGTACAGTAATTATAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGTTTAGCTCTTCTGCCTaGCATGCTGTTGCTATGGCT +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKFSSSA*HAVAMA
Trigger: AGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAA...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTACCTTCTTGTTCTTCTaGTGCACCAGGAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLITFLFF*CTRKFL
Trigger: CAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTACGAAACAGGTCCATTaGGAACTGCTCGAGATTTTG +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLITKQVH*ELLEIL
Trigger: CAAAATCTCGAGCAGTTCCAAATGGACCTGTTTCGT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCTCAGCAGCACGATTATaGATCTCAAGAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPSAARL*ISRISS
Trigger: AGATGAGATTCTTGAGATCAATAATCGTGCTGCTGA...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGGATGTCTGTCTCCTaGATGTCATCTTGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKRMSVS*MSSCSS
Trigger: TGAGGAGCAAGATGACATCAAGGAGACAGACATCCT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAAAGATTTCTTCGTTGCTaGTTAAATGTTCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQRFLRC*LNVLGS
Trigger: TGAGCCAAGAACATTTAACAAGCAACGAAGAAATCT...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTGTGGCATCTTATGGTTaGCAAGATTGGGAATATCAG +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIVASYG*QDWEYQ
Trigger: CTGATATTCCCAATCTTGCAAACCATAAGATGCCAC...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATCAGCAGCACGATTATaGATCTCAAGAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNISAARL*ISRISS
Trigger: AGATGAGATTCTTGAGATCAATAATCGTGCTGCTGA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TCAGAACACGGCAAGCTGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCCAGCACTTTCTTAAATaGATCAACCTTCTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: SEHGKLYTFHFVCERGFPQHFLK*INLLKL
Trigger: AAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTG...GGGGAAACCTCTTTCACACACAAAATGAAATGTGTACAGCTTGCCGTGTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTGGTTATGGACTGTCAGGGAAGGGGAAGGTAATCTATGGATGAAGATGCAACAGCACTTTCTTAAATaGATCAACCTTCTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: VWLWTVREGEGNLWMKMQQHFLK*INLLKL
Trigger: AAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTG...TTGCATCTTCATCCATAGATTACCTTCCCCTTCCCTGACAGTCCATAACCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTAGTGCACACAATCTTTaGCCTCCAAAAGGGACATAT +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLISAHNL*PPKGTY
Trigger: ATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCACT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATAAAAATTCTCATCTATTaGTGCCCCTGTATCTCAGGT +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIKILIY*CPCISG
Trigger: ACCTGAGATACAGGGGCACAAATAGATGAGAATTTT...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTATAGAGTCACCGGACTaGTCATTGTTTTCAATCCTG +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIIESPD*SLFSIL
Trigger: CAGGATTGAAAACAATGACAAGTCCGGTGACTCTAT...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATATTATGGTTTGCAAGATaGGGAATATCAGACACCAAA +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNILWFAR*GISDTK
Trigger: TTTGGTGTCTGATATTCCCAATCTTGCAAACCATAA...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGTGCACACAATCTTTaGCCTCCAAAAGGGACATAT +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKSAHNL*PPKGTY
Trigger: ATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCACT...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp AGGAGACTGATTTCAGATAGAAGGATCGTGTGTGTGCTACTATCCCTTAAATTAGTTCTGTTTAAAGGTTaGGTTATGGACTGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: RRLISDRRIVCVLLSLKLVLFKG*VMDCQG
Trigger: TCCCTGACAGTCCATAACCAAACCTTTAAACAGAAC...TAATTTAAGGGATAGTAGCACACACACGATCCTTCTATCTGAAATCAGTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GTTTTGAGCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGGTTCTGTTTAAAGGTTaGGTTATGGACTGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: VLSMFTLFRWHEESVKHKVLFKG*VMDCQG
Trigger: TCCCTGACAGTCCATAACCAAACCTTTAAACAGAAC...CTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGCTCAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp CAGGCAGAGGCACAAGAGCATGATGTACTGAACTCTCTATTGTCTGGAAATATACAGATTTCAATTTCTTaGTACAGCTTGCAAATCAGC +
Preference number: 5 (lower is better)
Translates to: QAEAQEHDVLNSLLSGNIQISIS*YSLQIS
Trigger: GCTGATTTGCAAGCTGTACAAAGAAATTGAAATCTG...TATATTTCCAGACAATAGAGAGTTCAGTACATCATGCTCTTGTGCCTCTGCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541036.5
CDS TCA 90 bp AGACATCATCAGGAATGTATTCTCATGGTAATTAATTCTACCACCTaGCGTGTTCAGCACGGAGACAGAAGTTTCTTAAAATATTCCCAG +
Preference number: 5 (lower is better)
Translates to: RHHQECILMVINSTT*RVQHGDRSFLKYSQ
Trigger: CTGGGAATATTTTAAGAAACTTCTGTCTCCGTGCTGAACACGTCAGGTGGTAGAATTAATTACCATGAGAATACATTCCTGATGATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS GCA 90 bp CTTGTCATTGTTTTCAATCCTGGGCTTGCGCTTTATTTTCCACAGTaGAGACATCATCAGGAATGTATTCTCATGGTAATTAATTCTACC +
Preference number: 5 (lower is better)
Translates to: LVIVFNPGLALYFPQ*RHHQECILMVINST
Trigger: GGTAGAATTAATTACCATGAGAATACATTCCTGATGATGTCTGCACTGTGGAAAATAAAGCGCAAGCCCAGGATTGAAAACAATGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTTATGGTTTGCAAGATaGGGAATATCAGACACCAAA +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLILWFAR*GISDTK
Trigger: TTTGGTGTCTGATATTCCCAATCTTGCAAACCATAA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTCAGCACTTTCTTAAATaGATCAACCTTCTCAAGCTT +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLIQHFLK*INLLKL
Trigger: AAGCTTGAGAAGGTTGATCAATTTAAGAAAGTGCTG...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp TGTACACATTTCATTTTGTGTGTGAAAGAGGTTTCCCCAGCTAGGAGACTGATTTCAGGCCCTGATTTATaGAGAATAAATAAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: CTHFILCVKEVSPARRLISGPDL*RINKSP
Trigger: AGGGCTTTTATTTATTCTCAATAAATCAGGGCCTGA...AATCAGTCTCCTAGCTGGGGAAACCTCTTTCACACACAAAATGAAATGTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS-3UTR CAA 90 bp GCATGTTTACCCTGTTTCGTTGGCATGAAGAAAGTGTTAAACACAAGAGAAGTTAGATTTCTTCGTTGCTaGTTAAATGTTCTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ACLPCFVGMKKVLNTREVRFLRC*LNVLGS
Trigger: TGAGCCAAGAACATTTAACAAGCAACGAAGAAATCT...AACTTCTCTTGTGTTTAACACTTTCTTCATGCCAACGAAACAGGGTAAACATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 72 bp GACGGCCAGGGCGCCGGCCTTGCGCACCGTGCCCTGTaGGGCGGTCAGCAGGATGTCCGACTGGCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: DGQGAGLAHRAL*GGQQDVRLARR
Trigger: TCTCCGGGCCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp ACACCCCCTGACGAGCCGCATCCCCGGTGGAGCTGCTaGCGCTGTCGCTGCCCACAAAGGCCCGGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: TPPDEPHPRWSC*RCRCPQRPGLW
Trigger: CCACAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp CGTACACCCCCTGACGAGCCGCATCCCCGGTGGAGCTaGTGCCGCTGTCGCTGCCCACAAAGGCCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: RTPPDEPHPRWS*CRCRCPQRPGL
Trigger: CAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp TCCGACTGGCCCGGAGAGCTCAGGGTGCCGCTGCTCTaGTCATCGCTGTGCGCCGAGCCGGCCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SDWPGELRVPLL*SSLCAEPASSR
Trigger: CCTGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp GAGCCGCATCCCCGGTGGAGCTGCTGCCGCTGTCGCTaGCCACAAAGGCCCGGCCTGTGGTGGGTGAGTAGC +
Preference number: 6 (lower is better)
Translates to: EPHPRWSCCRCR*PQRPGLWWVSS
Trigger: GCTACTCACCCACCACAGGCCGGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp GGAGAGCTCAGGGTGCCGCTGCTCTGCTCATCGCTGTaGGCCGAGCCGGCCTCCTCCAGGCTCTCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: GELRVPLLCSSL*AEPASSRLSLL
Trigger: CAACAGCGAGAGCCTGGAGGAGGCCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp TCAGCAGGATGTCCGACTGGCCCGGAGAGCTCAGGGTaGCGCTGCTCTGCTCATCGCTGTGCGCCGAGCCGG +
Preference number: 6 (lower is better)
Translates to: SAGCPTGPESSG*RCSAHRCAPSR
Trigger: CCGGCTCGGCGCACAGCGATGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp ACCGTGCCCTGTGCGGCGGTCAGCAGGATGTCCGACTaGCCCGGAGAGCTCAGGGTGCCGCTGCTCTGCTCA +
Preference number: 6 (lower is better)
Translates to: TVPCAAVSRMSD*PGELRVPLLCS
Trigger: TGAGCAGAGCAGCGGCACCCTGAGCTCTCCGGGCCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp TGCACCAGGAAGTTCTTGACGGCCAGGGCGCCGGCCTaGCGCACCGTGCCCTGTGCGGCGGTCAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: CTRKFLTARAPA*RTVPCAAVSRM
Trigger: CATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 90 bp CTGTGGATCACCTTCCCCGAGGAAGCGTGCCTGGTCCTCCGCGTCTaGTGCGAGAGGCGCAGGGAGCGGGAAGTGTGCTTGCGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: LWITFPEEACLVLRV*CERRREREVCLRPR
Trigger: CCTGGGGCGCAAGCACACTTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS TCA 72 bp ATCTCCAGCTCCCGCCGGAAGTTCTCGTACACCCCCTaGCGAGCCGCATCCCCGGTGGAGCTGCTGCCGCTG +
Preference number: 6 (lower is better)
Translates to: ISSSRRKFSYTP*RAASPVELLPL
Trigger: CAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACTTCCGGCGGGAGCTGGAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp TTCCCCGAGGAAGCGTGCCTGGTCCTCCGCGTCTTGTaGGAGAGGCGCAGGGAGCGGGAAGTGTGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: FPEEACLVLRVL*ERRREREVCLR
Trigger: GCGCAAGCACACTTCCCGCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 72 bp GCCCCTCGGTCTCCTCTGGAGCGGTCTCAGCACTGCTaGCCTGCTCGCTGCAAAGGCTGTGCCCTGGGTTGC +
Preference number: 6 (lower is better)
Translates to: APRSPLERSQHC*PARCKGCALGC
Trigger: GCAACCCAGGGCACAGCCTTTGCAGCGAGCAGGGCAGCAGTGCTGAGACCGCTCCAGAGGAGACCGAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CCA 72 bp AGTTCTCGTACACCCCCTGACGAGCCGCATCCCCGGTaGAGCTGCTGCCGCTGTCGCTGCCCACAAAGGCCC +
Preference number: 6 (lower is better)
Translates to: SSRTPPDEPHPR*SCCRCRCPQRP
Trigger: GGGCCTTTGTGGGCAGCGACAGCGGCAGCAGCTCCACCGGGGATGCGGCTCGTCAGGGGGTGTACGAGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 90 bp TTCTTCTTGTGCACCAGGAAGTTCTTGACGGCCAGGGCGCCGGCCTaGCGCACCGTGCCCTGTGCGGCGGTCAGCAGGATGTCCGACTGG +
Preference number: 6 (lower is better)
Translates to: FFLCTRKFLTARAPA*RTVPCAAVSRMSDW
Trigger: CCAGTCGGACATCCTGCTGACCGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 72 bp TACGGCCACGTCTCAACGCAGCAAGGACAGCGACGGTaGGACCCCGGAGCTGCACTCGCTTCCCACCAGTGC +
Preference number: 6 (lower is better)
Translates to: YGHVSTQQGQRR*DPGAALASHQC
Trigger: GCACTGGTGGGAAGCGAGTGCAGCTCCGGGGTCTCACCGTCGCTGTCCTTGCTGCGTTGAGACGTGGCCGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS GCA 72 bp TCGGAGTTCCTGTGGATCACCTTCCCCGAGGAAGCGTaGCTGGTCCTCCGCGTCTTGTGCGAGAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: SEFLWITFPEEA*LVLRVLCERRR
Trigger: CCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACAGGAACTCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 72 bp CCGAGCCGGCCTCCTCCAGGCTCTCGCTGTTGGTGGTaGTCATCTCCAGCTCCCGCCGGAAGTTCTCGTACA +
Preference number: 6 (lower is better)
Translates to: PSRPPPGSRCWW*SSPAPAGSSRT
Trigger: TGTACGAGAACTTCCGGCGGGAGCTGGAGATGAGCACCACCAACAGCGAGAGCCTGGAGGAGGCCGGCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp TCGGTCTCCTCTGGAGCGGTCTCAGCACTGCTGCCCTaGTCGCTGCAAAGGCTGTGCCCTGGGTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SVSSGAVSALLP*SLQRLCPGLLV
Trigger: CACCAGCAACCCAGGGCACAGCCTTTGCAGCGAGCAGGGCAGCAGTGCTGAGACCGCTCCAGAGGAGACCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 72 bp AACGCAGCAAGGACAGCGACGGTGAGACCCCGGAGCTaGACTCGCTTCCCACCAGTGCCCTCTGGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: NAARTATVRPRS*TRFPPVPSGKL
Trigger: CAGCTTCCCAGAGGGCACTGGTGGGAAGCGAGTGCAGCTCCGGGGTCTCACCGTCGCTGTCCTTGCTGCGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 72 bp AGTTCCTGTGGATCACCTTCCCCGAGGAAGCGTGCCTaGTCCTCCGCGTCTTGTGCGAGAGGCGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: SSCGSPSPRKRA*SSASCARGAGS
Trigger: GCTCCCTGCGCCTCTCGCACAAGACGCGGAGGACCAGGCACGCTTCCTCGGGGAAGGTGATCCACAGGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CAA 90 bp GTGGCTGACTCCACCTTCTTGTTCTTCTTGTGCACCAGGAAGTTCTaGACGGCCAGGGCGCCGGCCTTGCGCACCGTGCCCTGTGCGGCG +
Preference number: 6 (lower is better)
Translates to: VADSTFLFFLCTRKF*TARAPALRTVPCAA
Trigger: CGCCGCACAGGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp TGGTGGTGCCTCGCGACCGCAGTGGCGCAGGCAGAGTaGATGGCGGTGATCCAGTTTTCAAGCTCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: WWCLATAVAQAE*MAVIQFSSSVW
Trigger: CCAGACGGAGCTTGAAAACTGGATCACCGCCATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp GCAAATCAGCTCCAGGGTGTCCCGTGCAGTGTCGCCTaGCCGGACGACCGTCAGGGCAGGCTGATTATTGGG +
Preference number: 6 (lower is better)
Translates to: ANQLQGVPCSVA*PDDRQGRLIIG
Trigger: CCCAATAATCAGCCTGCCCTGACGGTCGTCCGGCCAGGCGACACTGCACGGGACACCCTGGAGCTGATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CCA 72 bp CCGAGAGTTGTCTCATGGTCGCCAGCTGAGGCCCCGTaGAGTCCTGAGGAGATGGGCTCTGGTCAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: PRVVSWSPAEAP*SPEEMGSGQRG
Trigger: ACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp CTCGCTTGCGCTCTCCAGGCCTCCATTGATCCCCGACAGGGCAGCTaGCTTCTTGAGCTGTGCCATGCGGGACGCGTGACTATCCAGGGT +
Preference number: 6 (lower is better)
Translates to: LACALQASIDPRQGS*LLELCHAGRVTIQG
Trigger: ACCCTGGATAGTCACGCGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp CTCCGGGTGGCTGACTCCACCTTCTTGTTCTTCTTGTaGACCAGGAAGTTCTTGACGGCCAGGGCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: LRVADSTFLFFL*TRKFLTARAPA
Trigger: GGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp GATTTCAGGAGTCGGAGCGTGTCTTCCTTGTGGTGGTaGCTCGCGACCGCAGTGGCGCAGGCAGAGTGGATG +
Preference number: 6 (lower is better)
Translates to: DFRSRSVSSLWW*LATAVAQAEWM
Trigger: CATCCACTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGACACGCTCCGACTCCTGAAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp TCTGATTTCAGGAGTCGGAGCGTGTCTTCCTTGTGGTaGTGCCTCGCGACCGCAGTGGCGCAGGCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: SDFRSRSVSSLW*CLATAVAQAEW
Trigger: CCACTCTGCCTGCGCCACTGCGGTCGCGAGGCACCACCACAAGGAAGACACGCTCCGACTCCTGAAATCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp TCCACCTTCTTGTTCTTCTTGTGCACCAGGAAGTTCTaGACGGCCAGGGCGCCGGCCTTGCGCACCGTGCCC +
Preference number: 6 (lower is better)
Translates to: STFLFFLCTRKF*TARAPALRTVP
Trigger: GGGCACGGTGCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp GCTCTCCAGGCCTCCATTGATCCCCGACAGGGCAGCTaGCTTCTTGAGCTGTGCCATGCGGGACGCGTGACT +
Preference number: 6 (lower is better)
Translates to: ALQASIDPRQGS*LLELCHAGRVT
Trigger: AGTCACGCGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp TGCTTCCACTTCCTCCGGGTGGCTGACTCCACCTTCTTGTTCTTCTaGTGCACCAGGAAGTTCTTGACGGCCAGGGCGCCGGCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: CFHFLRVADSTFLFF*CTRKFLTARAPALR
Trigger: GCGCAAGGCCGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 90 bp TCAGGCACCGCCTGCACAATGCTGTTCTCCACCCAGACGGCGTGTTaGGGGATGCTGTTGTGGTCTATCCCAGACCTGCCGTCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SGTACTMLFSTQTAC*GMLLWSIPDLPSLS
Trigger: CGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 72 bp GACTATCCAGGGTTTTCCGGCCTCTTTCCCGCTGACTaGTGGAGGTGGCCTGAAGCCGCTCCTGCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: DYPGFSGLFPAD*WRWPEAAPAGL
Trigger: GAGACCTGCAGGAGCGGCTTCAGGCCACCTCCATCAGTCAGCGGGAAAGAGGCCGGAAAACCCTGGATAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 72 bp CTGGAATGCGACCATCAACCTGCTGGGCAGAGTAAGTaGCTCGGGCAGGGTTCACGCAGACCTCCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: LECDHQPAGQSK*LGQGSRRPPGL
Trigger: GAGCCCAGGAGGTCTGCGTGAACCCTGCCCGAGTCACTTACTCTGCCCAGCAGGTTGATGGTCGCATTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469412.5
CDS GCA 72 bp AGTCCTTCTTGGGGTGCTCAGGCACCGCCTGCACAATaGTGTTCTCCACCCAGACGGCGTGTTTGGGGATGC +
Preference number: 6 (lower is better)
Translates to: SPSWGAQAPPAQ*CSPPRRRVWGC
Trigger: GCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp GGTCGCCAGCTGAGGCCCCGTGGAGTCCTGAGGAGATaGGCTCTGGTCAGAGGGGTTCATCTCATGCAAACT +
Preference number: 6 (lower is better)
Translates to: GRQLRPRGVLRR*ALVRGVHLMQT
Trigger: AGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCATCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 72 bp CCTTGCGCAGCTTATCTGCATCCGAGAGTTGTCTCATaGTCGCCAGCTGAGGCCCCGTGGAGTCCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: PCAAYLHPRVVS*SPAEAPWSPEE
Trigger: CTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp CAGGAGCTCGCAGATCACCTTGCGCAGCTTATCTGCATCCGAGAGTaGTCTCATGGTCGCCAGCTGAGGCCCCGTGGAGTCCTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: QELADHLAQLICIRE*SHGRQLRPRGVLRR
Trigger: TCTCCTCAGGACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp CGCCTAACCCAAATGACTTCCTCGCTTGCGCTCTCCAGGCCTCCATaGATCCCCGACAGGGCAGCTTGCTTCTTGAGCTGTGCCATGCGG +
Preference number: 6 (lower is better)
Translates to: RLTQMTSSLALSRPP*IPDRAACFLSCAMR
Trigger: CCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGAGGAAGTCATTTGGGTTAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp AGCGAGGCCGGCGGGTTCAGCCAGATCACGGTAGTGTaGAAAAGCAGGTCTCCCATGCTCAGATCTGCAACC +
Preference number: 6 (lower is better)
Translates to: SEAGGFSQITVV*KSRSPMLRSAT
Trigger: GGTTGCAGATCTGAGCATGGGAGACCTGCTTTTGCACACTACCGTGATCTGGCTGAACCCGCCGGCCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp AGACGAATGCTGCCAACTCTGGTTCCTTTTTCCACTTaGCCAGCGAGGCCGGCGGGTTCAGCCAGATCACGG +
Preference number: 6 (lower is better)
Translates to: RRMLPTLVPFST*PARPAGSARSR
Trigger: CCGTGATCTGGCTGAACCCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTCGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 72 bp CAGGTCTCAAGCCCATGTCCACTCGGTCCACCCAGATaGGGCTCCCGAAGTCTTCTAGGGTACCATCTTGGG +
Preference number: 6 (lower is better)
Translates to: QVSSPCPLGPPR*GSRSLLGYHLG
Trigger: CCCAAGATGGTACCCTAGAAGACTTCGGGAGCCCCATCTGGGTGGACCGAGTGGACATGGGCTTGAGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CAA 72 bp TTCCTCCGGGTGGCTGACTCCACCTTCTTGTTCTTCTaGTGCACCAGGAAGTTCTTGACGGCCAGGGCGCCG +
Preference number: 6 (lower is better)
Translates to: FLRVADSTFLFF*CTRKFLTARAP
Trigger: CGGCGCCCTGGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp GCCTGCACAATGCTGTTCTCCACCCAGACGGCGTGTTaGGGGATGCTGTTGTGGTCTATCCCAGACCTGCCG +
Preference number: 6 (lower is better)
Translates to: ACTMLFSTQTAC*GMLLWSIPDLP
Trigger: CGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp GCAGATCACCTTGCGCAGCTTATCTGCATCCGAGAGTaGTCTCATGGTCGCCAGCTGAGGCCCCGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: ADHLAQLICIRE*SHGRQLRPRGV
Trigger: GACTCCACGGGGCCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp GCCCTGCTCATGGCCGGCCTGGCCCCCTTCAGTGCACACAATCTTTaGCCTCCAAAAGGGACATATTGCTGGGATGAGGGAAGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: ALLMAGLAPFSAHNL*PPKGTYCWDEGRLS
Trigger: CGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCACTGAAGGGGGCCAGGCCGGCCATGAGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp ATGAACAGCCACAGGGCTGGGGACGATGTCAGCACCTaGCCCCTGCGGTGGCCATCACAGTTTCATCTAAGT +
Preference number: 6 (lower is better)
Translates to: MNSHRAGDDVST*PLRWPSQFHLS
Trigger: ACTTAGATGAAACTGTGATGGCCACCGCAGGGGGCAGGTGCTGACATCGTCCCCAGCCCTGTGGCTGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 72 bp CAATGCTGTTCTCCACCCAGACGGCGTGTTTGGGGATaGTGTTGTGGTCTATCCCAGACCTGCCGTCGCTCT +
Preference number: 6 (lower is better)
Translates to: QCCSPPRRRVWG*CCGLSQTCRRS
Trigger: AGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp CTCCAGGAGCTCGCAGATCACCTTGCGCAGCTTATCTaGATCCGAGAGTTGTCTCATGGTCGCCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LQELADHLAQLI*IRELSHGRQLR
Trigger: CCTCAGCTGGCGACCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp AGGTGCGCTCCGTCTCCAGGAGCTCGCAGATCACCTTaGGCAGCTTATCTGCATCCGAGAGTTGTCTCATGG +
Preference number: 6 (lower is better)
Translates to: RCAPSPGARRSP*AAYLHPRVVSW
Trigger: CCATGAGACAACTCTCGGATGCAGATAAGCTGCGCAAGGTGATCTGCGAGCTCCTGGAGACGGAGCGCACCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp ATTGATCCCCGACAGGGCAGCTTGCTTCTTGAGCTGTaGCATGCGGGACGCGTGACTATCCAGGGTTTTCCG +
Preference number: 6 (lower is better)
Translates to: IDPRQGSLLLEL*HAGRVTIQGFP
Trigger: CGGAAAACCCTGGATAGTCACGCGTCCCGCATGGCACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp GTCCGTGTCGGTAGTGGCCCCTTCAATCCCACTGTCTaGAAACTCACTGCCCTCGCCTGCATTAACATCCCC +
Preference number: 6 (lower is better)
Translates to: VRVGSGPFNPTV*KLTALACINIP
Trigger: GGGGATGTTAATGCAGGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAAGGGGCCACTACCGACACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469412.5
CDS CCA 72 bp CAGATGGGGCTCCCGAAGTCTTCTAGGGTACCATCTTaGGAGAAGGGCTCCAGGCCATTTTCAGCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: QMGLPKSSRVPS*EKGSRPFSARD
Trigger: GTCCCTGGCTGAAAATGGCCTGGAGCCCTTCTCCCAAGATGGTACCCTAGAAGACTTCGGGAGCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 72 bp AGCGTCATCCCCGTAAAGCCTGCTCTCCTCAGTGTCTaGCATGCTCTGCACAGAGGCTGCTGTGAGGACGAT +
Preference number: 6 (lower is better)
Translates to: SVIPVKPALLSV*HALHRGCCEDD
Trigger: ATCGTCCTCACAGCAGCCTCTGTGCAGAGCATGCCAGACACTGAGGAGAGCAGGCTTTACGGGGATGACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 72 bp CCTGCACAATGCTGTTCTCCACCCAGACGGCGTGTTTaGGGATGCTGTTGTGGTCTATCCCAGACCTGCCGT +
Preference number: 6 (lower is better)
Translates to: PAQCCSPPRRRV*GCCCGLSQTCR
Trigger: ACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 72 bp CTGCTCCTTCGCTTGCTCGCGGATCTGGACATGGCCTaGGTACGTCTTCTCACTCCAGTTTCACCAGTGCGT +
Preference number: 6 (lower is better)
Translates to: LLLRLLADLDMA*VRLLTPVSPVR
Trigger: ACGCACTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp GTCCGTGTCGGTAGTGGCCCCTTCAATCCCACTGTCTaGAAACTCACTGCCCTCGCCTGCATTAACATCCTG +
Preference number: 6 (lower is better)
Translates to: VRVGSGPFNPTV*KLTALACINIL
Trigger: CAGGATGTTAATGCAGGCGAGGGCAGTGAGTTTGCAGACAGTGGGATTGAAGGGGCCACTACCGACACGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 72 bp AAGACAAAGTCCTTCTTGGGGTGCTCAGGCACCGCCTaGACAATGCTGTTCTCCACCCAGACGGCGTGTTTG +
Preference number: 6 (lower is better)
Translates to: KTKSFLGCSGTA*TMLFSTQTACL
Trigger: CAAACACGCCGTCTGGGTGGAGAACAGCATTGTGCAGGCGGTGCCTGAGCACCCCAAGAAGGACTTTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp CCAGACCCCACAGAGAAGAAAACCTGCTCCTTCGCTTaGTCGCGGATCTGGACATGGCCTGAGTACGTCTTC +
Preference number: 6 (lower is better)
Translates to: PDPTEKKTCSFA*SRIWTWPEYVF
Trigger: GAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTTTTCTTCTCTGTGGGGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp CAGGCTGAGACAGCCTCTCCAGAAAGAGGATGTGTCTaGAACCCGACTTGGCAAATGAGGGAGGAGCTCACC +
Preference number: 6 (lower is better)
Translates to: QAETASPERGCV*NPTWQMREELT
Trigger: GGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGCTGTCTCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS CCA 72 bp CCATATGACCGTCAGGCTTCTGAAGCTGTTTACATCTaGAATGCGACCATCAACCCGCGACGGTCGTCCGGG +
Preference number: 6 (lower is better)
Translates to: PYDRQASEAVYI*NATINPRRSSG
Trigger: CCCGGACGACCGTCGCGGGTTGATGGTCGCATTCCAGATGTAAACAGCTTCAGAAGCCTGACGGTCATATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CCA 72 bp GACCACAGCAGTTTTGAAGACGAATGCTGCCAACTCTaGTTCCTTTTTCCACTTGCCCAGCGAGGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: DHSSFEDECCQL*FLFPLAQRGRR
Trigger: CCGCCGGCCTCGCTGGGCAAGTGGAAAAAGGAACCAGAGTTGGCAGCATTCGTCTTCAAAACTGCTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 72 bp CAAATGACTTCCTCGCTTGCGCTCTCCAGGCCTCCATaGATCCCCGACAGGGCAGCTTGCTTCTTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: QMTSSLALSRPP*IPDRAACFLSC
Trigger: ACAGCTCAAGAAGCAAGCTGCCCTGTCGGGGATCAATGGAGGCCTGGAGAGCGCAAGCGAGGAAGTCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 72 bp GGACACCCAGTAGTGCTTCCACTTCCTCCGGGTGGCTaGCTCCACCTTCTTGTTCTTCTTGTGCACCAGGAA +
Preference number: 6 (lower is better)
Translates to: GHPVVLPLPPGG*LHLLVLLVHQE
Trigger: TTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCACTACTGGGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 72 bp GCTGCTGCTTCGGGTTCTGGGCATCCAAGAATGCCTTaGAAGCCGTGTCTGTCTTGGCTTTCACCAGGACCT +
Preference number: 6 (lower is better)
Translates to: AAASGSGHPRMP*KPCLSWLSPGP
Trigger: AGGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp TTTGCCTCTGCATCTGCACTCGCCAAAGCTCGAACCTaGAGCGCTTCCGTGGGGATCATGTGTCGAAATCTG +
Preference number: 6 (lower is better)
Translates to: FASASALAKART*SASVGIMCRNL
Trigger: CAGATTTCGACACATGATCCCCACGGAAGCGCTGCAGGTTCGAGCTTTGGCGAGTGCAGATGCAGAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000286827.7
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp CACTCAACAAGGAGGTCAAGCTCACTGGAGTTCTACTaGGGAGTGGGGGTGACGGGAATCTTGAACGTCCGA +
Preference number: 6 (lower is better)
Translates to: HSTRRSSSLEFY*GVGVTGILNVR
Trigger: TCGGACGTTCAAGATTCCCGTCACCCCCACTCCGCAGTAGAACTCCAGTGAGCTTGACCTCCTTGTTGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS CCA 72 bp GCCTCTCCAGAAAGAGGATGTGTCTGCAACCCGACTTaGCAAATGAGGGAGGAGCTCACCAGCCAAAAGGAG +
Preference number: 6 (lower is better)
Translates to: ASPERGCVCNPT*QMREELTSQKE
Trigger: CTCCTTTTGGCTGGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS CAA 72 bp TGCTTCCACTTCCTCCGGGTGGCTGACTCCACCTTCTaGTTCTTCTTGTGCACCAGGAAGTTCTTGACGGCC +
Preference number: 6 (lower is better)
Translates to: CFHFLRVADSTF*FFLCTRKFLTA
Trigger: GGCCGTCAAGAACTTCCTGGTGCACAAGAAGAACAAGAAGGTGGAGTCAGCCACCCGGAGGAAGTGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp TGCTGCTGCTTCGGGTTCTGGGCATCCAAGAATGCCTaGAAAGCCGTGTCTGTCTTGGCTTTCACCAGGACC +
Preference number: 6 (lower is better)
Translates to: CCCFGFWASKNA*KAVSVLAFTRT
Trigger: GGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 72 bp ATGGCCGGCCTGGCCCCCTTCAGTGCACACAATCTTTaGCCTCCAAAAGGGACATATTGCTGGGATGAGGGA +
Preference number: 6 (lower is better)
Translates to: MAGLAPFSAHNL*PPKGTYCWDEG
Trigger: TCCCTCATCCCAGCAATATGTCCCTTTTGGAGGCAAAAGATTGTGTGCACTGAAGGGGGCCAGGCCGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp GTGGATGAGTGCTGCTGCTTCGGGTTCTGGGCATCCAAGAATGCCTaGAAAGCCGTGTCTGTCTTGGCTTTCACCAGGACCTTGGGAACT +
Preference number: 6 (lower is better)
Translates to: VDECCCFGFWASKNA*KAVSVLAFTRTLGT
Trigger: AGTTCCCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAAGGCATTCTTGGATGCCCAGAACCCGAAGCAGCAGCACTCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp CCAGGCCGTGAAGCCACCATGTTCTCAGAACAGAGGGCTGTGACCTaGCTGAAATGTGACACACGGCTTTCTGCTAGACAAAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PGREATMFSEQRAVT*LKCDTRLSARQSWL
Trigger: CAGCCAGCTTTGTCTAGCAGAAAGCCGTGTGTCACATTTCAGCAAGGTCACAGCCCTCTGTTCTGAGAACATGGTGGCTTCACGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS TCA 72 bp CTGTTCTGTACTCTTGCTGCTGTGATCAGTCTCATCTaGGGATTCCAAGTCTGGCCCCTCGGTCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: LFCTLAAVISLI*GFQVWPLGLLW
Trigger: CCAGAGGAGACCGAGGGGCCAGACTTGGAATCCTCAGATGAGACTGATCACAGCAGCAAGAGTACAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 72 bp CAGAAAGAGGATGTGTCTGCAACCCGACTTGGCAAATaGGGGAGGAGCTCACCAGCCAAAAGGAGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: QKEDVSATRLGK*GRSSPAKRRRE
Trigger: CTCCCTTCTCCTTTTGGCTGGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS GCA 72 bp ATGGGCTCTGGTCAGAGGGGTTCATCTCATGCAAACTaGGGCAAAATGCGGCCACCTGTTCTGTACTCTTGC +
Preference number: 6 (lower is better)
Translates to: MGSGQRGSSHAN*GKMRPPVLYSC
Trigger: GCAAGAGTACAGAACAGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CCA 72 bp AAAACCTGCTCCTTCGCTTGCTCGCGGATCTGGACATaGCCTGAGTACGTCTTCTCACTCCAGTTTCACCAG +
Preference number: 6 (lower is better)
Translates to: KTCSFACSRIWT*PEYVFSLQFHQ
Trigger: CTGGTGAAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp CCGCTGCTCAACAAGGCGCGCACGTTTCTCCCCGTCTaGCTTCACATGTCCCAAACTTCCAGTAACAGAAAT +
Preference number: 6 (lower is better)
Translates to: PLLNKARTFLPV*LHMSQTSSNRN
Trigger: ATTTCTGTTACTGGAAGTTTGGGACATGTGAAGCCAGACGGGGAGAAACGTGCGCGCCTTGTTGAGCAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455508.1
CDS CCA 72 bp TCCTCTTCCTCCTCCTGGGCTTCAGGTCTAGAAAGGTaGGTCTCAGTCCACAGTGATTCTACCGCTGCTCAA +
Preference number: 6 (lower is better)
Translates to: SSSSSWASGLER*VSVHSDSTAAQ
Trigger: TTGAGCAGCGGTAGAATCACTGTGGACTGAGACCCACCTTTCTAGACCTGAAGCCCAGGAGGAGGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455508.1
CDS CAA 72 bp TTGAAAGCCGTGTCTGTCTTGGCTTTCACCAGGACCTaGGGAACTTTTGTGTGGCTGGCGCAGAAGGCACTG +
Preference number: 6 (lower is better)
Translates to: LKAVSVLAFTRT*GTFVWLAQKAL
Trigger: CAGTGCCTTCTGCGCCAGCCACACAAAAGTTCCCAAGGTCCTGGTGAAAGCCAAGACAGACACGGCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CAA 72 bp AGCCTCTCCAGAAAGAGGATGTGTCTGCAACCCGACTaGGCAAATGAGGGAGGAGCTCACCAGCCAAAAGGA +
Preference number: 6 (lower is better)
Translates to: SLSRKRMCLQPD*ANEGGAHQPKG
Trigger: TCCTTTTGGCTGGTGAGCTCCTCCCTCATTTGCCAAGTCGGGTTGCAGACACATCCTCTTTCTGGAGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS CAA 90 bp GAGAGTGAGAATTCCAGGCTGTCCTCCCGCCAGATGTCTGCAGATTaGGAGCGTTTCTTCTTAAAGCTCGCCGTCTCCATGAAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: ESENSRLSSRQMSAD*ERFFLKLAVSMKVG
Trigger: GCCCACTTTCATGGAGACGGCGAGCTTTAAGAAGAAACGCTCCAAATCTGCAGACATCTGGCGGGAGGACAGCCTGGAATTCTCACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS GCA 72 bp CGTGTTTGGGGATGCTGTTGTGGTCTATCCCAGACCTaGCGTCGCTCTCGTAGAAAAATAGCGTGCATCCTT +
Preference number: 6 (lower is better)
Translates to: RVWGCCCGLSQT*RRSRRKIACIL
Trigger: AAGGATGCACGCTATTTTTCTACGAGAGCGACGGCAGGTCTGGGATAGACCACAACAGCATCCCCAAACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS GCA 72 bp AAAGCTGGCTGTCATGCAAAGCAGCGACTCTCATTCTaGAAGCAGGCTGAGACAGCCTCTCCAGAAAGAGGA +
Preference number: 6 (lower is better)
Translates to: KAGCHAKQRLSF*KQAETASPERG
Trigger: TCCTCTTTCTGGAGAGGCTGTCTCAGCCTGCTTGCAGAATGAGAGTCGCTGCTTTGCATGACAGCCAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS GCA 72 bp ATGGGCTCTGGTCAGAGGGGTTCATCTCATGCAAACTaGGGCAAAATGCGGCCACCTGTTCTGTACTCAGAT +
Preference number: 6 (lower is better)
Translates to: MGSGQRGSSHAN*GKMRPPVLYSD
Trigger: ATCTGAGTACAGAACAGGTGGCCGCATTTTGCCGCAGTTTGCATGAGATGAACCCCTCTGACCAGAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 72 bp GAGAAGAAAACCTGCTCCTTCGCTTGCTCGCGGATCTaGACATGGCCTGAGTACGTCTTCTCACTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: EKKTCSFACSRI*TWPEYVFSLQF
Trigger: AAACTGGAGTGAGAAGACGTACTCAGGCCATGTCCAGATCCGCGAGCAAGCGAAGGAGCAGGTTTTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CAA 72 bp AATTCCAGGCTGTCCTCCCGCCAGATGTCTGCAGATTaGGAGCGTTTCTTCTTAAAGCTCGCCGTCTCCATG +
Preference number: 6 (lower is better)
Translates to: NSRLSSRQMSAD*ERFFLKLAVSM
Trigger: CATGGAGACGGCGAGCTTTAAGAAGAAACGCTCCAAATCTGCAGACATCTGGCGGGAGGACAGCCTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS TCA 72 bp TGGTCTGAAAAAGGAAGGCATCACCCAGGGAATTGCTaGGGCAGAAGACAAAGTCCTTCTTGGGGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: WSEKGRHHPGNC*GRRQSPSWGAQ
Trigger: CTGAGCACCCCAAGAAGGACTTTGTCTTCTGCCTCAGCAATTCCCTGGGTGATGCCTTCCTTTTTCAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS TCA 72 bp TCGTGGACCCAAATGTCGCAGTCAGGGTTGTGCTGGTaGACGTTAGGTAAGACCACTTCTTTCTCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SWTQMSQSGLCW*TLGKTTSFSLL
Trigger: CAAGAGGGAGAAAGAAGTGGTCTTACCTAACGTTCACCAGCACAACCCTGACTGCGACATTTGGGTCCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286827.7
CDS TCA 72 bp GCAGGAAGTATCTACACACATTCTCTACGGGGCAGGTaGCGCAGTCAGATCTCAGTGTTCAGTTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AGSIYTHSLRGR*RSQISVFSFLE
Trigger: CTCCAGGAAACTGAACACTGAGATCTGACTGCGTCACCTGCCCCGTAGAGAATGTGTGTAGATACTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS TCA 72 bp TCATGCAAAGCAGCGACTCTCATTCTGCAAGCAGGCTaGGACAGCCTCTCCAGAAAGAGGATGTGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: SCKAATLILQAG*DSLSRKRMCLQ
Trigger: TTGCAGACACATCCTCTTTCTGGAGAGGCTGTCTCAGCCTGCTTGCAGAATGAGAGTCGCTGCTTTGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491927.1
CDS TCA 72 bp ATCCTCTCATATGGACGTCCCATGCTGGTTTTCCCATaGAAATCTACGGCCACGTCTCAACGCAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: ILSYGRPMLVFP*KSTATSQRSKD
Trigger: GTCCTTGCTGCGTTGAGACGTGGCCGTAGATTTTCATGGGAAAACCAGCATGGGACGTCCATATGAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS GCA 72 bp GAGGGAAGGCTCTCGGTTTTGAGGAGCTGTCTTCTGTaGTTATCACGCAGGATTGAATGCACAGCCTTTAGG +
Preference number: 6 (lower is better)
Translates to: EGRLSVLRSCLL*LSRRIECTAFR
Trigger: CCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp GCTCTGAAGAGAGCATCCTCTCATATGGACGTCCCATaGTGGTTTTCCCATGAAAATCTACGGCCACGTCTC +
Preference number: 6 (lower is better)
Translates to: ALKRASSHMDVP*WFSHENLRPRL
Trigger: GAGACGTGGCCGTAGATTTTCATGGGAAAACCAGCATGGGACGTCCATATGAGAGGATGCTCTCTTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CCA 72 bp CAGTGGTCCCCAGCCCAACTTGCTCCAAGAGCACTGTaGCATTTAGATATTGAGGTTGGAAATGATGTCCGG +
Preference number: 6 (lower is better)
Translates to: QWSPAQLAPRAL*HLDIEVGNDVR
Trigger: CCGGACATCATTTCCAACCTCAATATCTAAATGCCACAGTGCTCTTGGAGCAAGTTGGGCTGGGGACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CAA 72 bp GGGACATATTGCTGGGATGAGGGAAGGCTCTCGGTTTaGAGGAGCTGTCTTCTGTGCTTATCACGCAGGATT +
Preference number: 6 (lower is better)
Translates to: GTYCWDEGRLSV*RSCLLCLSRRI
Trigger: AATCCTGCGTGATAAGCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS CAA 90 bp CCTCCAAAAGGGACATATTGCTGGGATGAGGGAAGGCTCTCGGTTTaGAGGAGCTGTCTTCTGTGCTTATCACGCAGGATTGAATGCACA +
Preference number: 6 (lower is better)
Translates to: PPKGTYCWDEGRLSV*RSCLLCLSRRIECT
Trigger: TGTGCATTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCTCAAAACCGAGAGCCTTCCCTCATCCCAGCAATATGTCCCTTTTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS GCA 72 bp AGGAGCTGTCTTCTGTGCTTATCACGCAGGATTGAATaGACAGCCTTTAGGAAATCCTTTCGGCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: RSCLLCLSRRIE*TAFRKSFRLSG
Trigger: CCCAGAGAGCCGAAAGGATTTCCTAAAGGCTGTGCATTCAATCCTGCGTGATAAGCACAGAAGACAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000286827.7
ENST00000423206.5
ENST00000491927.1
ENST00000541036.5
ENST00000636887.1
CDS CCA 72 bp GAAACGATGATACCGAAAAGATTCCAAGGCGGCCCATaGCCACTTTCGTTGGTCGACTTGCAAAAGCGAGAA +
Preference number: 6 (lower is better)
Translates to: ETMIPKRFQGGP*PLSLVDLQKRE
Trigger: TTCTCGCTTTTGCAAGTCGACCAACGAAAGTGGCCATGGGCCGCCTTGGAATCTTTTCGGTATCATCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000469412.5
ENST00000541036.5
CDS CCA 72 bp CCATATGACCGTCAGGCTTCTGAAGCTGTTTACATCTaGAATGCGACCATCAACCTGCTGGGCAGAGTAAGT +
Preference number: 6 (lower is better)
Translates to: PYDRQASEAVYI*NATINLLGRVS
Trigger: ACTTACTCTGCCCAGCAGGTTGATGGTCGCATTCCAGATGTAAACAGCTTCAGAAGCCTGACGGTCATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469412.5
CDS CCA 72 bp CTGAAGAGAGCATCCTCTCATATGGACGTCCCATGCTaGTTTTCCCATGAAAATCTACGGCCACGTCTCAAC +
Preference number: 6 (lower is better)
Translates to: LKRASSHMDVPC*FSHENLRPRLN
Trigger: GTTGAGACGTGGCCGTAGATTTTCATGGGAAAACCAGCATGGGACGTCCATATGAGAGGATGCTCTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CAA 72 bp AGCTCTTCTGCCTTGCATGCTGTTGCTATGGCTAATTaGTGGGTTGGTGGCACCTTCAGAGAGACAGTGAGA +
Preference number: 6 (lower is better)
Translates to: SSSALHAVAMAN*WVGGTFRETVR
Trigger: TCTCACTGTCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CAA 90 bp CCTCGCAGTCCTTCTCTTCGGCGGAACCCAAGATTTCTTCGTTGCTaGTTAAATGTTCTTGGCTCAGATCAGAGAGTGAGAATTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PRSPSLRRNPRFLRC*LNVLGSDQRVRIPG
Trigger: GCCTGGAATTCTCACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAGAAATCTTGGGTTCCGCCGAAGAGAAGGACTGCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CAA 90 bp GCCTCCTCGCAGTCCTTCTCTTCGGCGGAACCCAAGATTTCTTCGTaGCTTGTTAAATGTTCTTGGCTCAGATCAGAGAGTGAGAATTCC +
Preference number: 6 (lower is better)
Translates to: ASSQSFSSAEPKISS*LVKCSWLRSESENS
Trigger: GGAATTCTCACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAGAAATCTTGGGTTCCGCCGAAGAGAAGGACTGCGAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 72 bp CAGCAGCAGCTGGTGGCATCTTATGGTTTGCAAGATTaGGAATATCAGACACCAAATTCCGACAGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: QQQLVASYGLQD*EYQTPNSDSSL
Trigger: CAGGCTACTGTCGGAATTTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGATGCCACCAGCTGCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 72 bp ATGTCTGTCTCCTTGATGTCATCTTGCTCCTCATACTaGGCAAGATCAAACTGCTCCTCTACCCATCGGTCA +
Preference number: 6 (lower is better)
Translates to: MSVSLMSSCSSY*ARSNCSSTHRS
Trigger: TGACCGATGGGTAGAGGAGCAGTTTGATCTTGCTCAGTATGAGGAGCAAGATGACATCAAGGAGACAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000541036.5
ENST00000636887.1
CDS CCA 72 bp TCTTCTGCCTTGCATGCTGTTGCTATGGCTAATTTGTaGGTTGGTGGCACCTTCAGAGAGACAGTGAGATTT +
Preference number: 6 (lower is better)
Translates to: SSALHAVAMANL*VGGTFRETVRF
Trigger: AAATCTCACTGTCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CCA 72 bp GTTGTTTTAGCTCTTCTGCCTTGCATGCTGTTGCTATaGCTAATTTGTGGGTTGGTGGCACCTTCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: VVLALLPCMLLL*LICGLVAPSER
Trigger: TCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CAA 72 bp GAGTCTCTTCAGCAGCAGCTGGTGGCATCTTATGGTTaGCAAGATTGGGAATATCAGACACCAAATTCCGAC +
Preference number: 6 (lower is better)
Translates to: ESLQQQLVASYG*QDWEYQTPNSD
Trigger: GTCGGAATTTGGTGTCTGATATTCCCAATCTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAAGAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CAA 72 bp AGCATAGAAGAGTTCAGGGCGTCAGCAGCACGATTATaGATCTCAAGAATCTCATCTCCTGCTTTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: SIEEFRASAARL*ISRISSPAFRP
Trigger: AGGCCTGAAAGCAGGAGATGAGATTCTTGAGATCAATAATCGTGCTGCTGACGCCCTGAACTCTTCTATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CAA 72 bp GAGTCACCGGACTTGTCATTGTTTTCAATCCTGGGCTaGCGCTTTATTTTCCACAGTGCAGACATCATCAGG +
Preference number: 6 (lower is better)
Translates to: ESPDLSLFSILG*RFIFHSADIIR
Trigger: CCTGATGATGTCTGCACTGTGGAAAATAAAGCGCAAGCCCAGGATTGAAAACAATGACAAGTCCGGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS CAA 90 bp AGTTGTTTTAGCTCTTCTGCCTTGCATGCTGTTGCTATGGCTAATTaGTGGGTTGGTGGCACCTTCAGAGAGACAGTGAGATTTCCTACA +
Preference number: 6 (lower is better)
Translates to: SCFSSSALHAVAMAN*WVGGTFRETVRFPT
Trigger: TGTAGGAAATCTCACTGTCTCTCTGAAGGTGCCACCAACCCACAAATTAGCCATAGCAACAGCATGCAAGGCAGAAGAGCTAAAACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS GCA 72 bp AGTCCTTCTCTTCGGCGGAACCCAAGATTTCTTCGTTaGTTGTTAAATGTTCTTGGCTCAGATCAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: SPSLRRNPRFLR*LLNVLGSDQRV
Trigger: CACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAGAAATCTTGGGTTCCGCCGAAGAGAAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CAA 72 bp CCTTCTCTTCGGCGGAACCCAAGATTTCTTCGTTGCTaGTTAAATGTTCTTGGCTCAGATCAGAGAGTGAGA +
Preference number: 6 (lower is better)
Translates to: PSLRRNPRFLRC*LNVLGSDQRVR
Trigger: TCTCACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAGAAATCTTGGGTTCCGCCGAAGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CAA 72 bp CAGTCCTTCTCTTCGGCGGAACCCAAGATTTCTTCGTaGCTTGTTAAATGTTCTTGGCTCAGATCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: QSFSSAEPKISS*LVKCSWLRSES
Trigger: ACTCTCTGATCTGAGCCAAGAACATTTAACAAGCAACGAAGAAATCTTGGGTTCCGCCGAAGAGAAGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000286827.7
ENST00000455508.1
ENST00000541036.5
CDS CCA 72 bp ATAATTACTGTACGGAGGAGTCTCTTCAGCAGCAGCTaGTGGCATCTTATGGTTTGCAAGATTGGGAATATC +
Preference number: 6 (lower is better)
Translates to: IITVRRSLFSSS*WHLMVCKIGNI
Trigger: GATATTCCCAATCTTGCAAACCATAAGATGCCACCAGCTGCTGCTGAAGAGACTCCTCCGTACAGTAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS CAA 72 bp GAGCCACCACACCCGGCCGAATCTTTAATTGAATACTaGACTTGGGAGGCAAATGCGTTTTTGTTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: EPPHPAESLIEY*TWEANAFLLFF
Trigger: GAAAAACAACAAAAACGCATTTGCCTCCCAAGTCAAGTATTCAATTAAAGATTCGGCCGGGTGTGGTGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469412.5
CDS CAA 90 bp AAATCTTTGAGCATAGAAGAGTTCAGGGCGTCAGCAGCACGATTATaGATCTCAAGAATCTCATCTCCTGCTTTCAGGCCTTTCTTGGAA +
Preference number: 6 (lower is better)
Translates to: KSLSIEEFRASAARL*ISRISSPAFRPFLE
Trigger: TTCCAAGAAAGGCCTGAAAGCAGGAGATGAGATTCTTGAGATCAATAATCGTGCTGCTGACGCCCTGAACTCTTCTATGCTCAAAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000286827.7
ENST00000541036.5
CDS TCA 72 bp TGTCAAAGGCTAAACTGTGGACCAGAACTCAGGCTTTaGTTTCACCTGGCTAAACAACAAAAGTTCCAGAAA +
Preference number: 6 (lower is better)
Translates to: CQRLNCGPELRL*FHLAKQQKFQK
Trigger: TTTCTGGAACTTTTGTTGTTTAGCCAGGTGAAATCAAAGCCTGAGTTCTGGTCCACAGTTTAGCCTTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636887.1
CDS TCA 72 bp CAGGAATGTATTCTCATGGTAATTAATTCTACCACCTaGCGTGTTCAGCACGGAGACAGAAGTTTCTTAAAA +
Preference number: 6 (lower is better)
Translates to: QECILMVINSTT*RVQHGDRSFLK
Trigger: TTTTAAGAAACTTCTGTCTCCGTGCTGAACACGTCAGGTGGTAGAATTAATTACCATGAGAATACATTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636887.1