RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000221995

Ensembl transcript IDs: ENST00000359450.6

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGGCAGGGAGGTTaGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATGTC +
Preference number: 1 (lower is better)
Translates to: PHGVVSGISVWGQGG*KNDTGSGHRVRTHV
Trigger: GACATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCACACACTTATCCCAGACACAACACCATGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
3UTR-3UTR TCA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAGGGAGGTTGGAAGAATaGCACGGGCTCAGGACACAG +
Preference number: 2 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTGRLEE*HGLRTQ
Trigger: CTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCC...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
3UTR-3UTR TCA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAGCTCAGGACACAGAGTaGGGACTCATGTCTAATGAG +
Preference number: 2 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTAQDTE*GLMSNE
Trigger: CTCATTAGACATGAGTCCTCACTCTGTGTCCTGAGC...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
3UTR CCA 72 bp GGGGCGGCAGATGGGAGCAGCACCAGGCACTGCACTTaGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAAC +
Preference number: 3 (lower is better)
Translates to: GAADGSSTRHCT*APKSGGVLRDN
Trigger: GTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGTGCTGCTCCCATCTGCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATCGTGGTCCCTGGAGCTaGAGCCCTGCCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHRGPWS*SPASRS
Trigger: GGATCTGGAGGCAGGGCTGCAGCTCCAGGGACCACG...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGCCCCACACTCGGCGTaGTCCCTGGAGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRAPHSA*SLELQP
Trigger: GGGCTGCAGCTCCAGGGACCACGCCGAGTGTGGGGC...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCCAGGTCCATCAGCTaGCTTCCTGCCCTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGPRSIS*LPALGV
Trigger: CACCCCTAGGGCAGGAAGTCAGCTGATGGACCTGGG...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATTTCCCGTACTCCTCCTaGCTCCACTGCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: GQGGWKNDTGSGHRVRTHFPYSS*LHCLRQ
Trigger: CTGACGGAGGCAGTGGAGGCAGGAGGAGTACGGGAA...ATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGCCTCTGGCTCCGTGTTaGTTGGCTAGGTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GGWDLQTTWCCVWDKCVGPLAPC*LARFWL
Trigger: AAGCCAGAACCTAGCCAACCAACACGGAGCCAGAGG...CCCCACACACTTATCCCAGACACAACACCATGTGGTCTGGAGGTCCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGGAATCAGGGCCCCTCTaGTCCTTTCCATTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GGWDLQTTWCCVWDKCVGESGPL*SFPLPH
Trigger: GTGAGGCAATGGAAAGGACCAGAGGGGCCCTGATTC...CCCCACACACTTATCCCAGACACAACACCATGTGGTCTGGAGGTCCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAACTTCCAGTAGCTGGTaGGGCTGCAGGGACCGAGGA +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPTSSSW*GCRDRG
Trigger: TCCTCGGTCCCTGCAGCCCCACCAGCTACTGGAAGT...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGGACTTCCAGTAGCTaGTGGGGCTGCAGGGACCGA +
Preference number: 4 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHGTSSS*WGCRDR
Trigger: TCGGTCCCTGCAGCCCCACCAGCTACTGGAAGTCCC...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGAGATCAGCAGTCGGGTaGGGGAGACCGGTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGRSAVG*GRPVPH
Trigger: GTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCT...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGTTGCACATAACACGCTaGGACAAAGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGWDLQTTWCCVWDKCVGLHITR*DKEGGV
Trigger: CACCCCACCCTCTTTGTCTCAGCGTGTTATGTGCAA...CCCCACACACTTATCCCAGACACAACACCATGTGGTCTGGAGGTCCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATCCAGTCAGTGTGGGATaGCCCAGCTTTAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GQGGWKNDTGSGHRVRTHPVSVG*PSFRPM
Trigger: CATGGGCCTAAAGCTGGGCCATCCCACACTGACTGG...ATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAGGGAGTATCGCGGTCTaGAGGTGTTGTCGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPGSIAV*RCCREG
Trigger: ACCCTCTCGACAACACCTCCAGACCGCGATACTCCC...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGATGCTGAGCACCACTaGGGTCCTCCCTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQDAEHH*GPPSPG
Trigger: GCCAGGGGAGGGAGGACCTCAGTGGTGCTCAGCATC...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATGGCACTGTAAATTGCTaGATCAGGGCCCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GQGGWKNDTGSGHRVRTHGTVNC*IRAPLV
Trigger: GACCAGAGGGGCCCTGATTCAGCAATTTACAGTGCC...ATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAGAATCCAGATGCAAATaGGGTGCTGCTGGCGAGCTC +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPESRCK*GAAGEL
Trigger: GAGCTCGCCAGCAGCACCTCATTTGCATCTGGATTC...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGTGGCTCCTCTCCTACTaGTGCCCCACACTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRWLLSY*CPTLGV
Trigger: CACGCCGAGTGTGGGGCATCAGTAGGAGAGGAGCCA...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGGCAGTGGCAGGAGCTaGCGGGGAGGTGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRGSGRS*RGGGKL
Trigger: GAGTTTACCACCTCCCCGGCAGCTCCTGCCACTGCC...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGTGTCTCTCTCTGCCTTaGGCTGCGGACCCACGAGAT +
Preference number: 4 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMCLSLP*AADPRD
Trigger: ATCTCGTGGGTCCGCAGCCCAAGGCAGAGAGAGACA...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACAAATGAGGTGCTGCTaGCGAGCTCCAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPQMRCC*RAPRHC
Trigger: ACAGTGCCTTGGAGCTCGCCAGCAGCACCTCATTTG...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGTGCCCCACCACTTCCTaGGAGAGGTGCCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQCPTTS*ERCPGS
Trigger: GCTGCCTGGGCACCTCTCCCAGGAAGTGGTGGGGCA...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGGAGGTCAACGTGCTaGCTCCATGCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRGRSTC*LHAVPG
Trigger: GCCTGGCACTGCATGGAGCCAGCACGTTGACCTCCC...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGGGGCAGGGAGGTTaGAAGAATGACACGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLWGQGG*KNDTGS
Trigger: TGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGACCAGGCACTGCACTTaGGCTCCCAAGTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLTRHCT*APKSGG
Trigger: TCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGAGTGGGGTTACTTTGTaGGCAGAGCGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRSGVTL*AERGEA
Trigger: TGCCTCGCCCCGCTCTGCTCACAAAGTAACCCCACT...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGTTCCCAAGGTGGCAGTaGGAGATGCAGAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMFPRWQ*EMQRAR
Trigger: TCTTGCCCTCTGCATCTCTCACTGCCACCTTGGGAA...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCAGGATCACAGCACTaGACAGGGAAGAGGGGACCT +
Preference number: 4 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGAGSQH*TGKRGP
Trigger: AGGTCCCCTCTTCCCTGTTCAGTGCTGTGATCCTGC...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGGAGACAAATGTCTGTaGCCCAGGGGCTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGGDKCL*PRGCTR
Trigger: CCGAGTGCAGCCCCTGGGGCACAGACATTTGTCTCC...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGTAGAGGCGCAGTGTaGAACAAGGCCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRGRGAV*NKAWPS
Trigger: AGAGGGCCAGGCCTTGTTGCACACTGCGCCTCTACC...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGCTCTCTGCCTTGGGCTaGGGACCCACGAGATTGCCC +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVLSALG*GPTRLP
Trigger: GGGCAATCTCGTGGGTCCGCAGCCCAAGGCAGAGAG...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCATTTCTCCCAAAGCCTTaGGGCCACCTTTCCCGTACT +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPFLPKP*GHLSRT
Trigger: AGTACGGGAAAGGTGGCCCCAAGGCTTTGGGAGAAA...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGATGGTCCAGACCACCTaGACAGAGCAGGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRMVQTT*TEQEGG
Trigger: GCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCAT...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAGAGGCCTCTTCCCCCTaGTGGAGCAGGATCACAGCA +
Preference number: 4 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTEASSP*WSRITA
Trigger: TGCTGTGATCCTGCTCCATCAGGGGGAAGAGGCCTC...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGCAGCTATCCCAGATGTaGAGAGGCCTCTTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRQLSQM*RGLFPL
Trigger: CAGGGGGAAGAGGCCTCTTCACATCTGGGATAGCTG...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATGCTCAGGACACAGAGTaGGGACTCATGTCTAATGAG +
Preference number: 4 (lower is better)
Translates to: GQGGWKNDTGSGHRVRTHAQDTE*GLMSNE
Trigger: CTCATTAGACATGAGTCCTCACTCTGTGTCCTGAGC...ATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGGGAGGTTGGAAGAATaGCACGGGCTCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRGRLEE*HGLRTQ
Trigger: CTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCC...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGGAGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCATCAGCTGACTTCCTaGCCTAGGGGTGTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RRKRAFISIHRVNRGEHSHQLTS*PRGVGH
Trigger: GTGCCCCACACCCCTAGGGCAGGAAGTCAGCTGATG...GCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCACTCCATGTCTCTCTCTaGCTTGGGCTGCGGACCCAC +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPLHVSL*LGLRTH
Trigger: GTGGGTCCGCAGCCCAAGGCAGAGAGAGACATGGAG...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGAGAGGAGTCAGCGTTCTaGGGCAAGAACCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGEESAF*GKNHLL
Trigger: AAGAAGGTGGTTCTTGCCGCAGAACGCTGACTCCTC...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGGAGGCCCACAAAGCTaGGTCAGAGCACTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGGGPQS*VRALPK
Trigger: TTTGGGGAGTGCTCTGACGCAGCTTTGTGGGCCTCC...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCATCTTGGCCAGGCTaGTCTCAACTCCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGPSWPG*SQLLTS
Trigger: TGAGGTTAGGAGTTGAGACCAGCCTGGCCAAGATGG...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCGCTGGTGGCTGGTaGAAGAAACAGGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLCAGGW*KKQAFG
Trigger: ACCAAAAGCCTGTTTCTTCCACCAGCCACCAGCGCA...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGTTGGCTAGGTTCTaGCTTGATGGCCACTCTACC +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLWLARF*LDGHST
Trigger: GGTAGAGTGGCCATCAAGCCAGAACCTAGCCAACCA...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGCTCCGTGTTGGTTaGCTAGGTTCTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLWLRVG*LGSGLM
Trigger: CATCAAGCCAGAACCTAGCCAACCAACACGGAGCCA...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGCCTGAATTCTCCTGCTaGCTTGGGCAAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRPEFSC*LGQVPR
Trigger: CCTGGGCACTTGCCCAAGCCAGCAGGAGAATTCAGG...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGGTCCGTGAACCACATTaGCTTGGAGACTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLVREPH*LGDWRS
Trigger: AGACCTCCAGTCTCCAAGCCAATGTGGTTCACGGAC...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACAGACACCCATAGCCTaGAAAGTGCCCCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGQTPIA*KVPLTE
Trigger: TTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTG...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGAGGGAGGCAGTGCTTaGATCAGCCCTGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGEGGSA*ISPELL
Trigger: CAGCAGTTCAGGGCTGATCCAAGCACTGCCTCCCTC...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGAGGGTGATGGTGGGCTaGGGGCATTGGGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQRVMVG*GHWGLK
Trigger: TTTCAGACCCCAATGCCCTCAGCCCACCATCACCCT...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCACTCTACCAACAGTaGATCCAATCCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGPLYQQ*IQSSLE
Trigger: CTCCAAGGAGGATTGGATTCACTGTTGGTAGAGTGG...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGCCTGGGAGGGCAGCATaGCAAAAACAGCTTCACATA +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLPGRAA*QKQLHI
Trigger: TATGTGAAGCTGTTTTTGGCATGCTGCCCTCCCAGG...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGTTCAAGCGATTCTCCTaGCTCTGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGFKRFS*LCLPSS
Trigger: GCTACTTGGGAGGCAGAGGCAGGAGAATCGCTTGAA...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATTTGGGGTCTGAAATCTaGCAGTTGCCAGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHLGSEI*QLPVSV
Trigger: CACACTGACTGGCAACTGGCAGATTTCAGACCCCAA...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAGGGAAGCTAAGTGACTaGTCCATCCCATGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTGKLSD*SIPCPH
Trigger: GTGGGGGCATGGGATGGAGCAGTCACTTAGCTTCCC...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGCAGATGCAAATGAGGTaGTGCTGGCGAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRQMQMR*CWRAPR
Trigger: CCTTGGAGCTCGCCAGCAGCACCTCATTTGCATCTG...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACTCCGTCAGTTCAAGTaGACTCTCGTTTCAACACCA +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPLRQFK*TLVSTP
Trigger: TGGTGTTGAAACGAGAGTGCACTTGAACTGACGGAG...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGTGCCTCCCAAGTAGCTaGGACTATAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRCLPSS*DYRHAP
Trigger: TGGCGCATGCCTATAGTCCCAGCTACTTGGGAGGCA...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGAGTTGCCAGTCAGTGTaGGATGGCCCAGCTTTAGGC +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRSCQSV*DGPALG
Trigger: GCCTAAAGCTGGGCCATCCCACACTGACTGGCAACT...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAGAGGAACTGCGCTGGTaGCTGGTGGAAGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTEELRW*LVEETG
Trigger: GCCTGTTTCTTCCACCAGCCACCAGCGCAGTTCCTC...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAGAATCCAATCCTCCTTaGAGCGGGTGGTATATATGG +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPESNPP*SGWYIW
Trigger: CCATATATACCACCCGCTCCAAGGAGGATTGGATTC...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCACTGGCCTTCTCCCTCTaGCTCCGTGTTGGTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPLAFSL*LRVGWL
Trigger: TAGCCAACCAACACGGAGCCAGAGGGAGAAGGCCAG...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGTTTCATCAAGACGCTaGGCAGTGGCAGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQVSSRR*AVAGAA
Trigger: GGCAGCTCCTGCCACTGCCCAGCGTCTTGATGAAAC...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGAGGCTAAGGAGTGCCTaGCTTTGTGGAAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLRLRSA*LCGKTV
Trigger: CACTGTCTTTCCACAAAGCCAGGCACTCCTTAGCCT...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAGCAGAGGGCAAGATTTaGTCACTGAGTACTCCTATG +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPAEGKI*SLSTPM
Trigger: CATAGGAGTACTCAGTGACCAAATCTTGCCCTCTGC...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGCCCCAATCCTCCCCATaGACCCAGCAACCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQPQSSP*TQQPRV
Trigger: CACTCTAGGTTGCTGGGTCCATGGGGAGGATTGGGG...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGTGACAGAGCAGGGCTaGGCCATTCCACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPVTEQG*AIPLAP
Trigger: TGGAGCAAGTGGAATGGCTCAGCCCTGCTCTGTCAC...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAAGATGGGAAGCTAAGTaGCTGCTCCATCCCATGCCC +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPRWEAK*LLHPMP
Trigger: GGGCATGGGATGGAGCAGTCACTTAGCTTCCCATCT...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGAAAAAAGGACCAAACCTaGATTCTCCTGCTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGKKDQT*ILLLAW
Trigger: CCAAGCCAGCAGGAGAATTCAGGTTTGGTCCTTTTT...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGGCGTGCATAAGAATCTaGTGCAGGTTCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVACIRI*CRFLGP
Trigger: AGGGCCCAGGAACCTGCATCAGATTCTTATGCACGC...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGAGAGCACAGCCCAGTaGGTACAAACCAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGESTAQ*VQTNCR
Trigger: CCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTC...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCGGGAAGCAGCAAGCTTaGCCTGGGAGGGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIGKQQA*PGRAAC
Trigger: GCATGCTGCCCTCCCAGGGCAAGCTTGCTGCTTCCC...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGTCCACAGCACAAGCATaGGACAGGTGTGTTAGTTCA +
Preference number: 4 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMSTAQA*DRCVSS
Trigger: TGAACTAACACACCTGTCGCATGCTTGTGCTGTGGA...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGCAAGCCAGCGTCTCCTaGTCAGCACTGTCACAAACA +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGQASVS*SALSQT
Trigger: TGTTTGTGACAGTGCTGAGCAGGAGACGCTGGCTTG...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCACTTAGTGGCTTCCACTaGTCCAGCCATCAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPLSGFH*SSHQGV
Trigger: GACTCCCTGATGGCTGGAGCAGTGGAAGCCACTAAG...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGATGCAAATGAGGTGCTaGTGGCGAGCTCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVMQMRC*WRAPRH
Trigger: GTGCCTTGGAGCTCGCCAGCAGCACCTCATTTGCAT...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGTGGCAGTGAGAGATaGAGAGGGCAAGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRGGSER*RGQDLV
Trigger: GACCAAATCTTGCCCTCTGCATCTCTCACTGCCACC...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCACTGGAGCTGCAGCCCTaGCTCCAGATCCTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPLELQP*LQILEF
Trigger: GAACTCTAGGATCTGGAGGCAGGGCTGCAGCTCCAG...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGCTCCAGCTTTCCTGGTaGAAAAGAGGAACTGCGCTG +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRLQLSW*KRGTAL
Trigger: CAGCGCAGTTCCTCTTTTCCACCAGGAAAGCTGGAG...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGCAGATGCCAGGGCTaGAATCCAGATGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRGRCQG*NPDANE
Trigger: CTCATTTGCATCTGGATTCCAGCCCTGGCATCTGCC...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAAGAGGAAGGAGACTCTaGAAGCTTTTAAAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPRGRRL*KLLKLR
Trigger: TCGGAGCTTTAAAAGCTTCCAGAGTCTCCTTCCTCT...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGCCCACCTCTTCCACGTaGAGACATCAGACACCCATA +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGPTSST*RHQTPI
Trigger: TATGGGTGTCTGATGTCTCCACGTGGAAGAGGTGGG...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGCCAGTCCAAAGAGATaGAAGGATCTTCCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPASPKR*KDLPQG
Trigger: GCCTTGGGGAAGATCCTTTCATCTCTTTGGACTGGC...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAGCAAGATTTGGTCACTaGGTACTCCTATGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPARFGH*VLLCVR
Trigger: TCTTACACATAGGAGTACTCAGTGACCAAATCTTGC...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATGCTCTCTTAGGCGAGTaGTTCCTAAAAAGATTCCTT +
Preference number: 4 (lower is better)
Translates to: GQGGWKNDTGSGHRVRTHALLGE*FLKRFL
Trigger: AAGGAATCTTTTTAGGAATCACTCGCCTAAGAGAGC...ATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGTGCTTGGATCAGCCCTaGACTGCTGTAGTTGGAATG +
Preference number: 4 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRCLDQP*TAVVGM
Trigger: CATTCCAACTACAGCAGTTCAGGGCTGATCCAAGCA...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGCCTGTTGCAAATTCTTaGTGGTCCTCATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMPVANS*WSSSPD
Trigger: ATCTGGTGATGAGGACCAGCAAGAATTTGCAACAGG...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATCTTTGCTATGGAAGCTaGGTTCCTGTTGCAAATTCT +
Preference number: 4 (lower is better)
Translates to: GQGGWKNDTGSGHRVRTHLCYGS*VPVANS
Trigger: AGAATTTGCAACAGGAACGCAGCTTCCATAGCAAAG...ATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGGAGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCAAACCTGAATTCTCCTaGTGGCTTGGGCAAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RRKRAFISIHRVNRGEHSKPEFS*WLGQVP
Trigger: GGGCACTTGCCCAAGCCAGCAGGAGAATTCAGGTTT...GCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGTCTGCCCTTCTTCCATaGTGGGGGTGTGGGCATAAA +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVSALLP*WGCGHK
Trigger: TTTATGCCCACACCCCCACCATGGAAGAAGGGCAGA...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATAGAAACTGGCAACAATaGGATTCCAATGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHRNWQQ*DSNESG
Trigger: GCCTGACTCATTGGAATCCCATTGTTGCCAGTTTCT...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AGTGAGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCGGGGGACATACCTCCTaGGAAGCAGCAAGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SEDSCLMSTGQNFHLQFFGGHTS*EAASLP
Trigger: GGGCAAGCTTGCTGCTTCCCAGGAGGTATGTCCCCC...GAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGCTATGGAGCCAACACTaGTTCCTTGGTACAACAGAG +
Preference number: 4 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGLWSQH*FLGTTE
Trigger: CTCTGTTGTACCAAGGAACCAGTGTTGGCTCCATAG...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCACCTCCTTGGAGCGGGTaGTATATATGGCGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPPPWSG*YIWRQD
Trigger: GTCCTGACGCCATATATACCACCCGCTCCAAGGAGG...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGTTGCAAATTCTTGCTaGTCCTCATCACCAGATGGG +
Preference number: 4 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGVANSC*SSSPDG
Trigger: CCCATCTGGTGATGAGGACCAGCAAGAATTTGCAAC...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTCTCCTGCTGGCTTaGGCAAGTGCCCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPILLLA*ASAQGL
Trigger: TAACCCCTGGGCACTTGCCCAAGCCAGCAGGAGAAT...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGCCTAGAGTTCCAACTTaGGCAAGCAGGAGTTCCATG +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRPRVPT*ASRSSM
Trigger: CATGGAACTCCTGCTTGCCCAAGTTGGAACTCTAGG...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCATTCCCGAGTCGTTCTTaGGAGCCCCAGCTACCACTA +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPFPSRS*EPQLPL
Trigger: TAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAA...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAATAACCTTTTTAGGGTaGGGGCTGGGACCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPITFLG*GLGPPD
Trigger: GTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTAT...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGTCAGGGATGCAGCTGTaGTGGAGAGGTTGGGTATTT +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQSGMQL*WRGWVF
Trigger: AAATACCCAACCTCTCCATCACAGCTGCATCCCTGA...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAAAGGACTGCTCTCTaGAGGGTGAAGATGGAGATG +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQERTAL*RVKMEM
Trigger: CATCTCCATCTTCACCCTTCAGAGAGCAGTCCTTTC...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGCCTTCCCTCTCAAGTTaGGTTTATGGTCCAGACCAC +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQPSLSS*VYGPDH
Trigger: GTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGG...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGTGAGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCCGATTCTCCTGCCTCTaGCTCCCAAGTAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SEDSCLMSTGQNFHLQFFRFSCL*LPSSWD
Trigger: GTCCCAGCTACTTGGGAGGCAGAGGCAGGAGAATCG...GAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCTCCTCCTGCCTCCACTaGCTCCGTCAGTTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLISSCLH*LRQFKC
Trigger: GCACTTGAACTGACGGAGGCAGTGGAGGCAGGAGGA...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGTGAGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCAGTAGCTGGTGGGGCTaGAGGGACCGAGGAATAAGG +
Preference number: 4 (lower is better)
Translates to: SEDSCLMSTGQNFHLQFFSSWWG*RDRGIR
Trigger: CCTTATTCCTCGGTCCCTGCAGCCCCACCAGCTACT...GAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGCCCTTGCCCGTAGCTTaGGTGATCTTTAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVPLPVA*VIFSHS
Trigger: AGAATGGCTAAAGATCACCCAAGCTACGGGCAAGGG...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGCATTGGCTTGGAGACTaGAGGTCTGGTGAGTACAAC +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQHWLGD*RSGEYN
Trigger: GTTGTACTCACCAGACCTCCAGTCTCCAAGCCAATG...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGACCTCCAGACCACATaGTGTTGTGTCTGGGATAAG +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQDLQTT*CCVWDK
Trigger: CTTATCCCAGACACAACACCATGTGGTCTGGAGGTC...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp AGTGAGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCGAGGGCATTGGGGTCTaGAATCTGCCAGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SEDSCLMSTGQNFHLQFFEGIGV*NLPVAS
Trigger: ACTGGCAACTGGCAGATTTCAGACCCCAATGCCCTC...GAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACATTGGTACAACAGAGATaGTTCCTGTTCCTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTLVQQR*FLFLPE
Trigger: CTCTGGGAGGAACAGGAAGCATCTCTGTTGTACCAA...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGTGGTCTTTTTGTTATTaGTGGTTGTGGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRWSFCY*WLWGQG
Trigger: CCCTTGACCCCACAACCAGCAATAACAAAAAGACCA...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGTGAGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCGTGGAAAAGAGGAACTaGGCTGGTGGCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SEDSCLMSTGQNFHLQFFVEKRN*AGGWWK
Trigger: CTTCCACCAGCCACCAGCGCAGTTCCTCTTTTCCAC...GAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGGAGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCAAGCTGCGTTCCTGTTaGAAATTCTTGCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRKRAFISIHRVNRGEHSKLRSC*KFLLVL
Trigger: GAGGACCAGCAAGAATTTGCAACAGGAACGCAGCTT...GCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCACCAACACTGGTTCCTTaGTACAACAGAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPPTLVP*YNRDAS
Trigger: GGAAGCATCTCTGTTGTACCAAGGAACCAGTGTTGG...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGTGTGCAACAAGGCCTaGCCCTCTTTGCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPVCNKA*PSLLSK
Trigger: TTTGGAAAGCAAAGAGGGCCAGGCCTTGTTGCACAC...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGAGTGCCTGGCTTTGTaGAAAGACAGTGGGGTTACT +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPECLAL*KDSGVT
Trigger: AGTAACCCCACTGTCTTTCCACAAAGCCAGGCACTC...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGTCTACTAACAAGAAATaGAGGCTCAGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRSTNKK*RLRKER
Trigger: CCTCTCCTTCCTGAGCCTCCATTTCTTGTTAGTAGA...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCAAGCACGCACGCCTTTaGTTCTGGAGGCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIKHARL*FWRPTK
Trigger: CTTTGTGGGCCTCCAGAACCAAAGGCGTGCGTGCTT...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AGGAGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCTCAAGTTGAGTTTATaGTCCAGACCACCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RRKRAFISIHRVNRGEHSLKLSL*SRPPGQ
Trigger: CTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAG...GCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCCACCCAGTAACCATCTaGTGCATGGGGGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIHPVTI*CMGEVT
Trigger: TGTCACTTCCCCCATGCAGCAGATGGTTACTGGGTG...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCCTGAAATCTGCCAGTTaGCAGTCAGTGTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLILKSAS*QSVWDG
Trigger: GCCATCCCACACTGACTGGCAACTGGCAGATTTCAG...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGACTCTTGTCTTACTATaGAGCCAACACTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TALGLPSLVEFSGITFLGTLVLL*SQHWFL
Trigger: AAGGAACCAGTGTTGGCTCCATAGTAAGACAAGAGT...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGAAGAGTCTGGCATTTTaGGACAGAGGAGCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQKSLAF*DRGAKS
Trigger: ACTTTTTGCTCCTCTGTCTCAAAATGCCAGACTCTT...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR GCA 90 bp AGGAGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCAGGTGTGTTAGTTCATaGATCTGGGAGACAAATGTC +
Preference number: 4 (lower is better)
Translates to: RRKRAFISIHRVNRGEHSRCVSS*IWETNV
Trigger: GACATTTGTCTCCCAGATGCATGAACTAACACACCT...GCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGTTAGTTCATGCATCTaGGAGACAAATGTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPVSSCI*ETNVCA
Trigger: GGCACAGACATTTGTCTCCCAGATGCATGAACTAAC...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGTTTGTGGAAAGACAGTaGGGTTACTTTGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVFVERQ*GYFVSR
Trigger: TCTGCTCACAAAGTAACCCCACTGTCTTTCCACAAA...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGAAATTAGTGGGAGCCTaGTTTGGTTCTCATTCTTTA +
Preference number: 4 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGKLVGA*FGSHSL
Trigger: TAAAGAATGAGAACCAAACCAGGCTCCCACTAATTT...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCATCGTTTCAACACCATTaGAGAAAACACAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPSFQHH*RKHSPV
Trigger: CACTGGGCTGTGTTTTCTCCAATGGTGTTGAAACGA...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCTCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLISFLRT*TRLSSP
Trigger: TGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGA...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAAAATACTCCCAGATCTaGACCCTTTCCCCTAATGAT +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPKYSQI*TLSPND
Trigger: ATCATTAGGGGAAAGGGTTCAGATCTGGGAGTATTT...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp AGTGAGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCAGACACCTGGATAAATaGCAGCCGTGTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: SEDSCLMSTGQNFHLQFFRHLDK*QPCFHT
Trigger: AGTATGGAAACACGGCTGTCATTTATCCAGGTGTCT...GAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGAATTCTGACTTAAGCTaGAAAGGGACCTTTGTTTAC +
Preference number: 4 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQNSDLS*KGTFVY
Trigger: GTAAACAAAGGTCCCTTTTCAGCTTAAGTCAGAATT...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGGAAGAAACAGGCTTTTaGTCTTTTTGTTATTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVEETGF*SFCYCW
Trigger: CCAGCAATAACAAAAAGACCAAAAGCCTGTTTCTTC...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCATTCAATTATGCAAAATaGTTCAGGAATGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPFNYAK*FRNGAV
Trigger: GACTGCCCCATTCCTGAACCATTTTGCATAATTGAA...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR TCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCGAGAATTTTCAGCTTTaGCCATGCCATCATCTACTA +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIENFQL*PCHHLL
Trigger: TAGTAGATGATGGCATGGTCAAAGCTGAAAATTCTC...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CCA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCGGCAAGAGTCAGAGCTaGCAATTTGAACATTTTAAC +
Preference number: 4 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIGKSQS*QFEHFN
Trigger: GTTAAAATGTTCAAATTGCCAGCTCTGACTCTTGCC...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp AGTGGCAGGAGCTGCCGGGGAGGTGGTAAACTCCATGTCTCTCTCTaGCTTGGGCTGCGGACCCACGAGATTGCCCTTGCCCGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: SGRSCRGGGKLHVSL*LGLRTHEIALARSL
Trigger: CAAGCTACGGGCAAGGGCAATCTCGTGGGTCCGCAGCCCAAGGCAGAGAGAGACATGGAGTTTACCACCTCCCCGGCAGCTCCTGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp CAACACCATTGGAGAAAACACAGCCCAGTGTGGCTCCTCTCCTACTaGTGCCCCACACTCGGCGTGGTCCCTGGAGCTGCAGCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: QHHWRKHSPVWLLSY*CPTLGVVPGAAALP
Trigger: AGGCAGGGCTGCAGCTCCAGGGACCACGCCGAGTGTGGGGCATCAGTAGGAGAGGAGCCACACTGGGCTGTGTTTTCTCCAATGGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp GGCCCAGCTTTAGGCCCATGTCCATCTGGGGGTAGAGGCGCAGTGTaGAACAAGGCCTGGCCCTCTTTGCTTTCCAAACCCCTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: GPALGPCPSGGRGAV*NKAWPSLLSKPLSQ
Trigger: CTGGGAGAGGGGTTTGGAAAGCAAAGAGGGCCAGGCCTTGTTGCACACTGCGCCTCTACCCCCAGATGGACATGGGCCTAAAGCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp GGGGTCAAGGGTGATGGTGGGCTGAGGGCATTGGGGTCTGAAATCTaGCAGTTGCCAGTCAGTGTGGGATGGCCCAGCTTTAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: GVKGDGGLRALGSEI*QLPVSVGWPSFRPM
Trigger: CATGGGCCTAAAGCTGGGCCATCCCACACTGACTGGCAACTGGCAGATTTCAGACCCCAATGCCCTCAGCCCACCATCACCCTTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGAAGGCCTGGCCCTCTTaGCTTTCCAAACCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GGWDLQTTWCCVWDKCVGKAWPS*LSKPLS
Trigger: GGAGAGGGGTTTGGAAAGCAAAGAGGGCCAGGCCTT...CCCCACACACTTATCCCAGACACAACACCATGTGGTCTGGAGGTCCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp CTGGAGGCCTCCAGCTATCCCAGATGTGAAGAGGCCTCTTCCCCCTaGTGGAGCAGGATCACAGCACTGAACAGGGAAGAGGGGACCTCA +
Preference number: 5 (lower is better)
Translates to: LEASSYPRCEEASSP*WSRITALNREEGTS
Trigger: TGAGGTCCCCTCTTCCCTGTTCAGTGCTGTGATCCTGCTCCATCAGGGGGAAGAGGCCTCTTCACATCTGGGATAGCTGGAGGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp TCCAGCCGCTCCACAGCACAAGCATGCGACAGGTGTGTTAGTTCATaGATCTGGGAGACAAATGTCTGTGCCCCAGGGGCTGCACTCGGG +
Preference number: 5 (lower is better)
Translates to: SSRSTAQACDRCVSS*IWETNVCAPGAALG
Trigger: CCCGAGTGCAGCCCCTGGGGCACAGACATTTGTCTCCCAGATGCATGAACTAACACACCTGTCGCATGCTTGTGCTGTGGAGCGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp GGCGAGGCAGATGCCAGGGCTGGAATCCAGATGCAAATGAGGTGCTaGTGGCGAGCTCCAAGGCACTGTAAATTGCTGAATCAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: GEADARAGIQMQMRC*WRAPRHCKLLNQGP
Trigger: GGGGCCCTGATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACCTCATTTGCATCTGGATTCCAGCCCTGGCATCTGCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp CGGGGCGAGGCAGATGCCAGGGCTGGAATCCAGATGCAAATGAGGTaGTGCTGGCGAGCTCCAAGGCACTGTAAATTGCTGAATCAGGGC +
Preference number: 5 (lower is better)
Translates to: RGEADARAGIQMQMR*CWRAPRHCKLLNQG
Trigger: GCCCTGATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACCTCATTTGCATCTGGATTCCAGCCCTGGCATCTGCCTCGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGCTGGCTCCGTGTTGGTaGGCTAGGTTCTGGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GGWDLQTTWCCVWDKCVGLAPCW*ARFWLD
Trigger: ATCAAGCCAGAACCTAGCCAACCAACACGGAGCCAG...CCCCACACACTTATCCCAGACACAACACCATGTGGTCTGGAGGTCCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp CTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACGCGGTCTGGAGGTGTaGTCGAGAGGGTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LPSLVEFSGITFLGWGLGRGLEV*SRGSCS
Trigger: TGAGCACGACCCTCTCGACAACACCTCCAGACCGCG...TCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGCACCAGGCACTGCACTaGGGCTCCCAAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMHQALH*GSQVWW
Trigger: CCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGTG...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp GCTAAGGAGTGCCTGGCTTTGTGGAAAGACAGTGGGGTTACTTTGTaGGCAGAGCGGGGCGAGGCAGATGCCAGGGCTGGAATCCAGATG +
Preference number: 5 (lower is better)
Translates to: AKECLALWKDSGVTL*AERGEADARAGIQM
Trigger: CATCTGGATTCCAGCCCTGGCATCTGCCTCGCCCCGCTCTGCTCACAAAGTAACCCCACTGTCTTTCCACAAAGCCAGGCACTCCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp CTTCATCAGGCCTCTGGCTCTGGAGGCCTCCAGCTATCCCAGATGTaGAGAGGCCTCTTCCCCCTGATGGAGCAGGATCACAGCACTGAA +
Preference number: 5 (lower is better)
Translates to: LHQASGSGGLQLSQM*RGLFPLMEQDHSTE
Trigger: TTCAGTGCTGTGATCCTGCTCCATCAGGGGGAAGAGGCCTCTTCACATCTGGGATAGCTGGAGGCCTCCAGAGCCAGAGGCCTGATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCAGCAGCTCCCCTCCCCTaGACTTTGCTATGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GGVLRDNLFRVGAGTSRPAAPLP*TLLWKL
Trigger: CAGCTTCCATAGCAAAGTCAAGGGGAGGGGAGCTGC...TGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGATGTCTCTCTCTGCCTaGGGCTGCGGACCCACGAGA +
Preference number: 5 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLMSLSA*GCGPTR
Trigger: TCTCGTGGGTCCGCAGCCCAAGGCAGAGAGAGACAT...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp GTGTTTCCATACTGTTTCATCAAGACGCTGGGCAGTGGCAGGAGCTaGCGGGGAGGTGGTAAACTCCATGTCTCTCTCTGCCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VFPYCFIKTLGSGRS*RGGGKLHVSLCLGL
Trigger: CAGCCCAAGGCAGAGAGAGACATGGAGTTTACCACCTCCCCGGCAGCTCCTGCCACTGCCCAGCGTCTTGATGAAACAGTATGGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGAATTCTCCTGCTGGCTaGGGCAAGTGCCCAGGGGTT +
Preference number: 5 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLNSPAG*GKCPGV
Trigger: AACCCCTGGGCACTTGCCCAAGCCAGCAGGAGAATT...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp GATGTGAAGAGGCCTCTTCCCCCTGATGGAGCAGGATCACAGCACTaGACAGGGAAGAGGGGACCTCATCTCACAGCTCCATTCACCTTC +
Preference number: 5 (lower is better)
Translates to: DVKRPLPPDGAGSQH*TGKRGPHLTAPFTF
Trigger: GAAGGTGAATGGAGCTGTGAGATGAGGTCCCCTCTTCCCTGTTCAGTGCTGTGATCCTGCTCCATCAGGGGGAAGAGGCCTCTTCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGGTGGGCTGAGGGCATaGGGGTCTGAAATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VNRGEHSPVSTNQLQERRGGLRA*GSEICQ
Trigger: CTGGCAGATTTCAGACCCCAATGCCCTCAGCCCACC...CCTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTGGGATAAGTGTGTGGGGTCCTGTTGCAAATTCTaGCTGGTCCTCATCACCAGA +
Preference number: 5 (lower is better)
Translates to: GGWDLQTTWCCVWDKCVGSCCKF*LVLITR
Trigger: TCTGGTGATGAGGACCAGCAAGAATTTGCAACAGGA...CCCCACACACTTATCCCAGACACAACACCATGTGGTCTGGAGGTCCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 90 bp CCTTTCCCGTACTCCTCCTGCCTCCACTGCCTCCGTCAGTTCAAGTaGACTCTCGTTTCAACACCATTGGAGAAAACACAGCCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PFPYSSCLHCLRQFK*TLVSTPLEKTQPSV
Trigger: CACACTGGGCTGTGTTTTCTCCAATGGTGTTGAAACGAGAGTGCACTTGAACTGACGGAGGCAGTGGAGGCAGGAGGAGTACGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATTCTGAAATCTGCCAGTaGCCAGTCAGTGTGGGATGG +
Preference number: 5 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHSEICQ*PVSVGW
Trigger: CCATCCCACACTGACTGGCAACTGGCAGATTTCAGA...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGCCCACGAGATTGCCCTaGCCCGTAGCTTGGGTGATC +
Preference number: 5 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVPTRLP*PVAWVI
Trigger: GATCACCCAAGCTACGGGCAAGGGCAATCTCGTGGG...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp CACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGCTTTCTCCCAAAGCCTaGGGGCCACCTTTCCCGTAC +
Preference number: 5 (lower is better)
Translates to: HCTWAPKSGGVLRDNLFRLSPKA*GPPFPY
Trigger: GTACGGGAAAGGTGGCCCCAAGGCTTTGGGAGAAAG...CCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATTCTGGTGAGTACAACTaGTCTAGGGTAGGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHSGEYN*SRVGAL
Trigger: GAGAGCCCCTACCCTAGACAAGTTGTACTCACCAGA...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGCCAACACTGGTTCCTaGGTACAACAGAGATGCTTC +
Preference number: 5 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHANTGS*VQQRCF
Trigger: GAAGCATCTCTGTTGTACCAAGGAACCAGTGTTGGC...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp AAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGCCCCTCCCCTTGACTTaGCTATGGAAGCTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: KRAFISIHRVNRGEHSPVPLPLT*LWKLRS
Trigger: GGAACGCAGCTTCCATAGCAAAGTCAAGGGGAGGGG...CACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp ACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGCCAAGGCACTGTAAATaGCTGAATCAGGGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: TWAPKSGGVLRDNLFRVGPRHCK*LNQGPS
Trigger: AGAGGGGCCCTGATTCAGCAATTTACAGTGCCTTGG...CCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGCCTTCCCTCTCAAGTaGAGTTTATGGTCCAGACCA +
Preference number: 5 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMAFPLK*SLWSRP
Trigger: TGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGC...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCACGGGGTTTCACCATCTaGGCCAGGCTGGTCTCAACT +
Preference number: 5 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPRGFTI*ARLVST
Trigger: AGTTGAGACCAGCCTGGCCAAGATGGTGAAACCCCG...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCTGCGGACCCACGAGATaGCCCTTGCCCGTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLICGPTR*PLPVAW
Trigger: CCAAGCTACGGGCAAGGGCAATCTCGTGGGTCCGCA...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGCTCTGGTCCTTTCCATaGCCTCACCTCTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMLWSFP*PHLFLR
Trigger: CCTTAAAAAGAGGTGAGGCAATGGAAAGGACCAGAG...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGAAGGAGTGCCTGGCTTaGTGGAAAGACAGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: TALGLPSLVEFSGITFLGKECLA*WKDSGV
Trigger: AACCCCACTGTCTTTCCACAAAGCCAGGCACTCCTT...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACATTAGTCTCCGTCAGCTaGGCCTCTGTGTCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: AFISIHRVNRGEHSPVSTLVSVS*ASVSLS
Trigger: TGACAGCGACACAGAGGCCAAGCTGACGGAGACTAA...TGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp TACAACCCAGTAATTCTGCATTTTCAGTCCTTCCCCAGAAGGCTCTaGAGCAGGCAGTCCGTGAACCACATTGGCTTGGAGACTGGAGGT +
Preference number: 5 (lower is better)
Translates to: YNPVILHFQSFPRRL*SRQSVNHIGLETGG
Trigger: ACCTCCAGTCTCCAAGCCAATGTGGTTCACGGACTGCCTGCTTCAGAGCCTTCTGGGGAAGGACTGAAAATGCAGAATTACTGGGTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp ATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGTGGCTAGGTTCTGGCTaGATGGCCACTCTACCAACA +
Preference number: 5 (lower is better)
Translates to: IHRVNRGEHSPVSTNQLQWLGSG*MATLPT
Trigger: TGTTGGTAGAGTGGCCATCAAGCCAGAACCTAGCCA...CTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp ACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGGAAGCTGCGTTCCTGTaGCAAATTCTTGCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: TALGLPSLVEFSGITFLGEAAFL*QILAGP
Trigger: AGGACCAGCAAGAATTTGCAACAGGAACGCAGCTTC...CCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 90 bp TCTGGTGAGTACAACTTGTCTAGGGTAGGGGCTCTCTTAGGCGAGTaGTTCCTAAAAAGATTCCTTCTGAGGAGGAGGCGCTTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: SGEYNLSRVGALLGE*FLKRFLLRRRRFPC
Trigger: ACAGGGAAAGCGCCTCCTCCTCAGAAGGAATCTTTTTAGGAATCACTCGCCTAAGAGAGCCCCTACCCTAGACAAGTTGTACTCACCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCATTCCCGAGTCGTTCTaGGGAGCCCCAGCTACCACT +
Preference number: 5 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIIPESF*GAPATT
Trigger: AGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAAT...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGCTGAGCCATTCCACTaGCTCCATTCCTTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPAEPFH*LHSLKG
Trigger: ACCTTTTAAGGAATGGAGCAAGTGGAATGGCTCAGC...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGGAAGAAACAGGCTTTaGGTCTTTTTGTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMGRNRL*VFLLLL
Trigger: CAGCAATAACAAAAAGACCAAAAGCCTGTTTCTTCC...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGCTGAAAAGGGACCTTaGTTTACTAGCCCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: GVLRDNLFRVGAGTSRPHAEKGP*FTSPFK
Trigger: TTTAAAAGGGCTAGTAAACAAAGGTCCCTTTTCAGC...ATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCGTGAACCACATTGGCTaGGAGACTGGAGGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLIVNHIG*ETGGLV
Trigger: CACCAGACCTCCAGTCTCCAAGCCAATGTGGTTCAC...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp AGGAAAAGGGCCTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAAGGCTTTTGGTCTTTTaGTTATTGCTGGTTGTGGGG +
Preference number: 5 (lower is better)
Translates to: RKRAFISIHRVNRGEHSPRLLVF*LLLVVG
Trigger: CCCCACAACCAGCAATAACAAAAAGACCAAAAGCCT...TGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTCAGAGCTGGCAATTaGAACATTTTAACCAAATTG +
Preference number: 5 (lower is better)
Translates to: EFSGITFLGWGLGPPDHMVRAGN*NILTKL
Trigger: CAATTTGGTTAAAATGTTCAAATTGCCAGCTCTGAC...CATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCATGCAGAGGGCAAGATTaGGTCACTGAGTACTCCTAT +
Preference number: 5 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPCRGQD*VTEYSY
Trigger: ATAGGAGTACTCAGTGACCAAATCTTGCCCTCTGCA...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp TATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCACTCGTTTCAACACCATaGGAGAAAACACAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: YFHTSGKQGRAQPSEYKPLVSTP*EKTQPS
Trigger: ACTGGGCTGTGTTTTCTCCAATGGTGTTGAAACGAG...TGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp TCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGCCCAAAAGCCAAACATaGTTAAGTAAAAACCTTCCT +
Preference number: 5 (lower is better)
Translates to: SGITFLGWGLGPPDHMVLPKSQT*LSKNLP
Trigger: AGGAAGGTTTTTACTTAACAATGTTTGGCTTTTGGG...CAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS-3UTR CAA 90 bp GGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCAGTTTTTCTGATCTTGGTCTTTTTGTTATaGCTGGTTGTGGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GLMSNEHRPKLPSSVFLILVFLL*LVVGSR
Trigger: CCTTGACCCCACAACCAGCAATAACAAAAAGACCAA...GATCAGAAAAACTGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 90 bp GCAGGAGCTGCCGGGGAGGTGGTAAACTCCATGTCTCTCTCTGCCTaGGGCTGCGGACCCACGAGATTGCCCTTGCCCGTAGCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: AGAAGEVVNSMSLSA*GCGPTRLPLPVAWV
Trigger: CACCCAAGCTACGGGCAAGGGCAATCTCGTGGGTCCGCAGCCCAAGGCAGAGAGAGACATGGAGTTTACCACCTCCCCGGCAGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp AGCTGCCGGGGAGGTGGTAAACTCCATGTCTCTCTCTaGCTTGGGCTGCGGACCCACGAGATTGCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: SCRGGGKLHVSL*LGLRTHEIALA
Trigger: GGCAAGGGCAATCTCGTGGGTCCGCAGCCCAAGGCAGAGAGAGACATGGAGTTTACCACCTCCCCGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp TGGAGAAAACACAGCCCAGTGTGGCTCCTCTCCTACTaGTGCCCCACACTCGGCGTGGTCCCTGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: WRKHSPVWLLSY*CPTLGVVPGAA
Trigger: TGCAGCTCCAGGGACCACGCCGAGTGTGGGGCATCAGTAGGAGAGGAGCCACACTGGGCTGTGTTTTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp GGTGGGCTGAGGGCATTGGGGTCTGAAATCTGCCAGTaGCCAGTCAGTGTGGGATGGCCCAGCTTTAGGCCC +
Preference number: 6 (lower is better)
Translates to: GGLRALGSEICQ*PVSVGWPSFRP
Trigger: GGGCCTAAAGCTGGGCCATCCCACACTGACTGGCAACTGGCAGATTTCAGACCCCAATGCCCTCAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp CCCTCCCCTGGCCTTCTCCCTCTGGCTCCGTGTTGGTaGGCTAGGTTCTGGCTTGATGGCCACTCTACCAAC +
Preference number: 6 (lower is better)
Translates to: PSPGLLPLAPCW*ARFWLDGHSTN
Trigger: GTTGGTAGAGTGGCCATCAAGCCAGAACCTAGCCAACCAACACGGAGCCAGAGGGAGAAGGCCAGGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 90 bp CCATCTGGGGGTAGAGGCGCAGTGTGCAACAAGGCCTGGCCCTCTTaGCTTTCCAAACCCCTCTCCCAGGTCCATCAGCTGACTTCCTGC +
Preference number: 6 (lower is better)
Translates to: PSGGRGAVCNKAWPS*LSKPLSQVHQLTSC
Trigger: GCAGGAAGTCAGCTGATGGACCTGGGAGAGGGGTTTGGAAAGCAAAGAGGGCCAGGCCTTGTTGCACACTGCGCCTCTACCCCCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp TGCCTGGCTTTGTGGAAAGACAGTGGGGTTACTTTGTaGGCAGAGCGGGGCGAGGCAGATGCCAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: CLALWKDSGVTL*AERGEADARAG
Trigger: TCCAGCCCTGGCATCTGCCTCGCCCCGCTCTGCTCACAAAGTAACCCCACTGTCTTTCCACAAAGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp CACTCGGGGGACATACCTCCTGGGAAGCAGCAAGCTTaGCCTGGGAGGGCAGCATGCCAAAAACAGCTTCAC +
Preference number: 6 (lower is better)
Translates to: HSGDIPPGKQQA*PGRAACQKQLH
Trigger: GTGAAGCTGTTTTTGGCATGCTGCCCTCCCAGGGCAAGCTTGCTGCTTCCCAGGAGGTATGTCCCCCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp CCTCCCCTGGCCTTCTCCCTCTGGCTCCGTGTTGGTTaGCTAGGTTCTGGCTTGATGGCCACTCTACCAACA +
Preference number: 6 (lower is better)
Translates to: PPLAFSLWLRVG*LGSGLMATLPT
Trigger: TGTTGGTAGAGTGGCCATCAAGCCAGAACCTAGCCAACCAACACGGAGCCAGAGGGAGAAGGCCAGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp CTGACCGATCAGGGGCAAGGGACTTCCAGTAGCTGGTaGGGCTGCAGGGACCGAGGAATAAGGTTAGGGACA +
Preference number: 6 (lower is better)
Translates to: LTDQGQGTSSSW*GCRDRGIRLGT
Trigger: TGTCCCTAACCTTATTCCTCGGTCCCTGCAGCCCCACCAGCTACTGGAAGTCCCTTGCCCCTGATCGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp CATCTGACCGATCAGGGGCAAGGGACTTCCAGTAGCTaGTGGGGCTGCAGGGACCGAGGAATAAGGTTAGGG +
Preference number: 6 (lower is better)
Translates to: HLTDQGQGTSSS*WGCRDRGIRLG
Trigger: CCCTAACCTTATTCCTCGGTCCCTGCAGCCCCACCAGCTACTGGAAGTCCCTTGCCCCTGATCGGTCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp GGTAGAGGCGCAGTGTGCAACAAGGCCTGGCCCTCTTaGCTTTCCAAACCCCTCTCCCAGGTCCATCAGCTG +
Preference number: 6 (lower is better)
Translates to: GRGAVCNKAWPS*LSKPLSQVHQL
Trigger: CAGCTGATGGACCTGGGAGAGGGGTTTGGAAAGCAAAGAGGGCCAGGCCTTGTTGCACACTGCGCCTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 90 bp AAGGGTGATGGTGGGCTGAGGGCATTGGGGTCTGAAATCTGCCAGTaGCCAGTCAGTGTGGGATGGCCCAGCTTTAGGCCCATGTCCATC +
Preference number: 6 (lower is better)
Translates to: KGDGGLRALGSEICQ*PVSVGWPSFRPMSI
Trigger: GATGGACATGGGCCTAAAGCTGGGCCATCCCACACTGACTGGCAACTGGCAGATTTCAGACCCCAATGCCCTCAGCCCACCATCACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp GGTGATGGTGGGCTGAGGGCATTGGGGTCTGAAATCTaGCAGTTGCCAGTCAGTGTGGGATGGCCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: GDGGLRALGSEI*QLPVSVGWPSF
Trigger: AAAGCTGGGCCATCCCACACTGACTGGCAACTGGCAGATTTCAGACCCCAATGCCCTCAGCCCACCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 90 bp CTGGCCTTCTCCCTCTGGCTCCGTGTTGGTTGGCTAGGTTCTGGCTaGATGGCCACTCTACCAACAGTGAATCCAATCCTCCTTGGAGCG +
Preference number: 6 (lower is better)
Translates to: LAFSLWLRVGWLGSG*MATLPTVNPILLGA
Trigger: CGCTCCAAGGAGGATTGGATTCACTGTTGGTAGAGTGGCCATCAAGCCAGAACCTAGCCAACCAACACGGAGCCAGAGGGAGAAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp GGTGCTGCTGGCGAGCTCCAAGGCACTGTAAATTGCTaGATCAGGGCCCCTCTGGTCCTTTCCATTGCCTCA +
Preference number: 6 (lower is better)
Translates to: GAAGELQGTVNC*IRAPLVLSIAS
Trigger: TGAGGCAATGGAAAGGACCAGAGGGGCCCTGATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp TACTGTTTCATCAAGACGCTGGGCAGTGGCAGGAGCTaGCGGGGAGGTGGTAAACTCCATGTCTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: YCFIKTLGSGRS*RGGGKLHVSLC
Trigger: GCAGAGAGAGACATGGAGTTTACCACCTCCCCGGCAGCTCCTGCCACTGCCCAGCGTCTTGATGAAACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp CATTGGGGTCTGAAATCTGCCAGTTGCCAGTCAGTGTaGGATGGCCCAGCTTTAGGCCCATGTCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: HWGLKSASCQSV*DGPALGPCPSG
Trigger: CCCAGATGGACATGGGCCTAAAGCTGGGCCATCCCACACTGACTGGCAACTGGCAGATTTCAGACCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GACACTCCTACCATTAAGCACGCACGCCTTTGGTTCTaGAGGCCCACAAAGCTGCGTCAGAGCACTCCCCAA +
Preference number: 6 (lower is better)
Translates to: DTPTIKHARLWF*RPTKLRQSTPQ
Trigger: TTGGGGAGTGCTCTGACGCAGCTTTGTGGGCCTCCAGAACCAAAGGCGTGCGTGCTTAATGGTAGGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp ATGTCTCTCTCTGCCTTGGGCTGCGGACCCACGAGATaGCCCTTGCCCGTAGCTTGGGTGATCTTTAGCCAT +
Preference number: 6 (lower is better)
Translates to: MSLSALGCGPTR*PLPVAWVIFSH
Trigger: ATGGCTAAAGATCACCCAAGCTACGGGCAAGGGCAATCTCGTGGGTCCGCAGCCCAAGGCAGAGAGAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp CACGCACCAGAGAAACTGGCAACAATGGGATTCCAATaGGTCAGGCTCTGCCCTTCTTCCATGGTGGGGGTG +
Preference number: 6 (lower is better)
Translates to: HAPEKLATMGFQ*VRLCPSSMVGV
Trigger: CACCCCCACCATGGAAGAAGGGCAGAGCCTGACTCATTGGAATCCCATTGTTGCCAGTTTCTCTGGTGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp TCCAGCTATCCCAGATGTGAAGAGGCCTCTTCCCCCTaGTGGAGCAGGATCACAGCACTGAACAGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: SSYPRCEEASSP*WSRITALNREE
Trigger: CTCTTCCCTGTTCAGTGCTGTGATCCTGCTCCATCAGGGGGAAGAGGCCTCTTCACATCTGGGATAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp GGAGGAGGCGCTTTCCCTGTCAAATACTCCCAGATCTaGACCCTTTCCCCTAATGATGGCTCCCTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GGGAFPVKYSQI*TLSPNDGSLRP
Trigger: AGGCCTCAGGGAGCCATCATTAGGGGAAAGGGTTCAGATCTGGGAGTATTTGACAGGGAAAGCGCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GCACAAGCATGCGACAGGTGTGTTAGTTCATGCATCTaGGAGACAAATGTCTGTGCCCCAGGGGCTGCACTC +
Preference number: 6 (lower is better)
Translates to: AQACDRCVSSCI*ETNVCAPGAAL
Trigger: GAGTGCAGCCCCTGGGGCACAGACATTTGTCTCCCAGATGCATGAACTAACACACCTGTCGCATGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp ATGAGGTGCTGCTGGCGAGCTCCAAGGCACTGTAAATaGCTGAATCAGGGCCCCTCTGGTCCTTTCCATTGC +
Preference number: 6 (lower is better)
Translates to: MRCCWRAPRHCK*LNQGPSGPFHC
Trigger: GCAATGGAAAGGACCAGAGGGGCCCTGATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 90 bp CAGATGCAAATGAGGTGCTGCTGGCGAGCTCCAAGGCACTGTAAATaGCTGAATCAGGGCCCCTCTGGTCCTTTCCATTGCCTCACCTCT +
Preference number: 6 (lower is better)
Translates to: QMQMRCCWRAPRHCK*LNQGPSGPFHCLTS
Trigger: AGAGGTGAGGCAATGGAAAGGACCAGAGGGGCCCTGATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACCTCATTTGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 90 bp CTCCACTGCCTCCGTCAGTTCAAGTGCACTCTCGTTTCAACACCATaGGAGAAAACACAGCCCAGTGTGGCTCCTCTCCTACTGATGCCC +
Preference number: 6 (lower is better)
Translates to: LHCLRQFKCTLVSTP*EKTQPSVAPLLLMP
Trigger: GGGCATCAGTAGGAGAGGAGCCACACTGGGCTGTGTTTTCTCCAATGGTGTTGAAACGAGAGTGCACTTGAACTGACGGAGGCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp TCCACAGCACAAGCATGCGACAGGTGTGTTAGTTCATaGATCTGGGAGACAAATGTCTGTGCCCCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: STAQACDRCVSS*IWETNVCAPGA
Trigger: AGCCCCTGGGGCACAGACATTTGTCTCCCAGATGCATGAACTAACACACCTGTCGCATGCTTGTGCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp AGCACGCACGCCTTTGGTTCTGGAGGCCCACAAAGCTaGGTCAGAGCACTCCCCAAAAGCCAAACATTGTTA +
Preference number: 6 (lower is better)
Translates to: STHAFGSGGPQS*VRALPKSQTLL
Trigger: TAACAATGTTTGGCTTTTGGGGAGTGCTCTGACGCAGCTTTGTGGGCCTCCAGAACCAAAGGCGTGCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GCCAGGGCTGGAATCCAGATGCAAATGAGGTGCTGCTaGCGAGCTCCAAGGCACTGTAAATTGCTGAATCAG +
Preference number: 6 (lower is better)
Translates to: ARAGIQMQMRCC*RAPRHCKLLNQ
Trigger: CTGATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACCTCATTTGCATCTGGATTCCAGCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp AAGCAGGCAGTCCGTGAACCACATTGGCTTGGAGACTaGAGGTCTGGTGAGTACAACTTGTCTAGGGTAGGG +
Preference number: 6 (lower is better)
Translates to: KQAVREPHWLGD*RSGEYNLSRVG
Trigger: CCCTACCCTAGACAAGTTGTACTCACCAGACCTCCAGTCTCCAAGCCAATGTGGTTCACGGACTGCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp CAGAAGGCTCTGAAGCAGGCAGTCCGTGAACCACATTaGCTTGGAGACTGGAGGTCTGGTGAGTACAACTTG +
Preference number: 6 (lower is better)
Translates to: QKALKQAVREPH*LGDWRSGEYNL
Trigger: CAAGTTGTACTCACCAGACCTCCAGTCTCCAAGCCAATGTGGTTCACGGACTGCCTGCTTCAGAGCCTTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp GATGCCAGGGCTGGAATCCAGATGCAAATGAGGTGCTaGTGGCGAGCTCCAAGGCACTGTAAATTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: DARAGIQMQMRC*WRAPRHCKLLN
Trigger: ATTCAGCAATTTACAGTGCCTTGGAGCTCGCCAGCAGCACCTCATTTGCATCTGGATTCCAGCCCTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GTATATATGGCGTCAGGACTACTCCAGCTTTCCTGGTaGAAAAGAGGAACTGCGCTGGTGGCTGGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: VYMASGLLQLSW*KRGTALVAGGR
Trigger: TCTTCCACCAGCCACCAGCGCAGTTCCTCTTTTCCACCAGGAAAGCTGGAGTAGTCCTGACGCCATATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GATGGCCACTCTACCAACAGTGAATCCAATCCTCCTTaGAGCGGGTGGTATATATGGCGTCAGGACTACTCC +
Preference number: 6 (lower is better)
Translates to: DGHSTNSESNPP*SGWYIWRQDYS
Trigger: GGAGTAGTCCTGACGCCATATATACCACCCGCTCCAAGGAGGATTGGATTCACTGTTGGTAGAGTGGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp TCAGGGCTAGGATCTGCCGTTAGGCTAAGGAGTGCCTaGCTTTGTGGAAAGACAGTGGGGTTACTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: SGLGSAVRLRSA*LCGKTVGLLCE
Trigger: CTCACAAAGTAACCCCACTGTCTTTCCACAAAGCCAGGCACTCCTTAGCCTAACGGCAGATCCTAGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp CCCAAGGTGGCAGTGAGAGATGCAGAGGGCAAGATTTaGTCACTGAGTACTCCTATGTGTAAGACACGGCCT +
Preference number: 6 (lower is better)
Translates to: PKVAVRDAEGKI*SLSTPMCKTRP
Trigger: AGGCCGTGTCTTACACATAGGAGTACTCAGTGACCAAATCTTGCCCTCTGCATCTCTCACTGCCACCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp ACAAATGACACTCCTACCATTAAGCACGCACGCCTTTaGTTCTGGAGGCCCACAAAGCTGCGTCAGAGCACT +
Preference number: 6 (lower is better)
Translates to: TNDTPTIKHARL*FWRPTKLRQST
Trigger: AGTGCTCTGACGCAGCTTTGTGGGCCTCCAGAACCAAAGGCGTGCGTGCTTAATGGTAGGAGTGTCATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp GTAATTCTGCATTTTCAGTCCTTCCCCAGAAGGCTCTaGAGCAGGCAGTCCGTGAACCACATTGGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: VILHFQSFPRRL*SRQSVNHIGLE
Trigger: CTCCAAGCCAATGTGGTTCACGGACTGCCTGCTTCAGAGCCTTCTGGGGAAGGACTGAAAATGCAGAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp TATGGAGCCAACACTGGTTCCTTGGTACAACAGAGATaGTTCCTGTTCCTCCCAGAGCACCCAGTAACCATC +
Preference number: 6 (lower is better)
Translates to: YGANTGSLVQQR*FLFLPEHPVTI
Trigger: GATGGTTACTGGGTGCTCTGGGAGGAACAGGAAGCATCTCTGTTGTACCAAGGAACCAGTGTTGGCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp TACTCCTCCTGCCTCCACTGCCTCCGTCAGTTCAAGTaGACTCTCGTTTCAACACCATTGGAGAAAACACAG +
Preference number: 6 (lower is better)
Translates to: YSSCLHCLRQFK*TLVSTPLEKTQ
Trigger: CTGTGTTTTCTCCAATGGTGTTGAAACGAGAGTGCACTTGAACTGACGGAGGCAGTGGAGGCAGGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp TCCGTCAGTTCAAGTGCACTCTCGTTTCAACACCATTaGAGAAAACACAGCCCAGTGTGGCTCCTCTCCTAC +
Preference number: 6 (lower is better)
Translates to: SVSSSALSFQHH*RKHSPVWLLSY
Trigger: GTAGGAGAGGAGCCACACTGGGCTGTGTTTTCTCCAATGGTGTTGAAACGAGAGTGCACTTGAACTGACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp CCTCCCCTTGACTTTGCTATGGAAGCTGCGTTCCTGTaGCAAATTCTTGCTGGTCCTCATCACCAGATGGGA +
Preference number: 6 (lower is better)
Translates to: PPLDFAMEAAFL*QILAGPHHQMG
Trigger: TCCCATCTGGTGATGAGGACCAGCAAGAATTTGCAACAGGAACGCAGCTTCCATAGCAAAGTCAAGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp CTCCGTCAGTTCAAGTGCACTCTCGTTTCAACACCATaGGAGAAAACACAGCCCAGTGTGGCTCCTCTCCTA +
Preference number: 6 (lower is better)
Translates to: LRQFKCTLVSTP*EKTQPSVAPLL
Trigger: TAGGAGAGGAGCCACACTGGGCTGTGTTTTCTCCAATGGTGTTGAAACGAGAGTGCACTTGAACTGACGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp TACAACTTGTCTAGGGTAGGGGCTCTCTTAGGCGAGTaGTTCCTAAAAAGATTCCTTCTGAGGAGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: YNLSRVGALLGE*FLKRFLLRRRR
Trigger: GCGCCTCCTCCTCAGAAGGAATCTTTTTAGGAATCACTCGCCTAAGAGAGCCCCTACCCTAGACAAGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS GCA 72 bp CTCCCCTTGACTTTGCTATGGAAGCTGCGTTCCTGTTaGAAATTCTTGCTGGTCCTCATCACCAGATGGGAA +
Preference number: 6 (lower is better)
Translates to: LPLTLLWKLRSC*KFLLVLITRWE
Trigger: TTCCCATCTGGTGATGAGGACCAGCAAGAATTTGCAACAGGAACGCAGCTTCCATAGCAAAGTCAAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GCTCGGCTGACTCTTGTCTTACTATGGAGCCAACACTaGTTCCTTGGTACAACAGAGATGCTTCCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: ARLTLVLLWSQH*FLGTTEMLPVP
Trigger: AGGAACAGGAAGCATCTCTGTTGTACCAAGGAACCAGTGTTGGCTCCATAGTAAGACAAGAGTCAGCCGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp TACTCCAGCTTTCCTGGTGGAAAAGAGGAACTGCGCTaGTGGCTGGTGGAAGAAACAGGCTTTTGGTCTTTT +
Preference number: 6 (lower is better)
Translates to: YSSFPGGKEELR*WLVEETGFWSF
Trigger: AAAAGACCAAAAGCCTGTTTCTTCCACCAGCCACCAGCGCAGTTCCTCTTTTCCACCAGGAAAGCTGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp AGTGAATCCAATCCTCCTTGGAGCGGGTGGTATATATaGCGTCAGGACTACTCCAGCTTTCCTGGTGGAAAA +
Preference number: 6 (lower is better)
Translates to: SESNPPWSGWYI*RQDYSSFPGGK
Trigger: TTTTCCACCAGGAAAGCTGGAGTAGTCCTGACGCCATATATACCACCCGCTCCAAGGAGGATTGGATTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp TCTACCAACAGTGAATCCAATCCTCCTTGGAGCGGGTaGTATATATGGCGTCAGGACTACTCCAGCTTTCCT +
Preference number: 6 (lower is better)
Translates to: STNSESNPPWSG*YIWRQDYSSFP
Trigger: AGGAAAGCTGGAGTAGTCCTGACGCCATATATACCACCCGCTCCAAGGAGGATTGGATTCACTGTTGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp ACATTCCTGTACCTGCTAGGCAGACACCTGGATAAATaGCAGCCGTGTTTCCATACTGTTTCATCAAGACGC +
Preference number: 6 (lower is better)
Translates to: TFLYLLGRHLDK*QPCFHTVSSRR
Trigger: GCGTCTTGATGAAACAGTATGGAAACACGGCTGTCATTTATCCAGGTGTCTGCCTAGCAGGTACAGGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS TCA 72 bp CCTATGAAATATTACGAGGAAGCCAGTCCAAAGAGATaGAAGGATCTTCCCCAAGGCCACACAGCCAGTATG +
Preference number: 6 (lower is better)
Translates to: PMKYYEEASPKR*KDLPQGHTASM
Trigger: CATACTGGCTGTGTGGCCTTGGGGAAGATCCTTTCATCTCTTTGGACTGGCTTCCTCGTAATATTTCATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp GTGAATAACCATGCTCGGCTGACTCTTGTCTTACTATaGAGCCAACACTGGTTCCTTGGTACAACAGAGATG +
Preference number: 6 (lower is better)
Translates to: VNNHARLTLVLL*SQHWFLGTTEM
Trigger: CATCTCTGTTGTACCAAGGAACCAGTGTTGGCTCCATAGTAAGACAAGAGTCAGCCGAGCATGGTTATTCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CAA 72 bp GGATCTTCCCCAAGGCCACACAGCCAGTATGTAAACTaGAATCTGGGACTCTTAGACCTCAAAGACTTTGGA +
Preference number: 6 (lower is better)
Translates to: GSSPRPHSQYVN*NLGLLDLKDFG
Trigger: TCCAAAGTCTTTGAGGTCTAAGAGTCCCAGATTCAAGTTTACATACTGGCTGTGTGGCCTTGGGGAAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6
CDS CCA 72 bp AGAATACATGTTCAATTATGCAAAATGGTTCAGGAATaGGGCAGTCTGGTTAATAGTTATCGTATTTCTCAT +
Preference number: 6 (lower is better)
Translates to: RIHVQLCKMVQE*GSLVNSYRISH
Trigger: ATGAGAAATACGATAACTATTAACCAGACTGCCCCATTCCTGAACCATTTTGCATAATTGAACATGTATTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359450.6