RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THY1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154096

Ensembl transcript IDs: ENST00000284240.10, ENST00000524659.1, ENST00000524970.5, ENST00000527590.5, ENST00000528295.5, ENST00000528522.5, ENST00000532974.1, ENST00000533840.1, ENST00000580275.5, ENST00000584021.1

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCACCCGTGGAGACCCCAGCGAAGCGGGGGCAGGCAGGCACTGCTaGAGGAGCGAAGGCCAGGTGGACACGAGGACAGATTCCAGAGGC +
Preference number: 1 (lower is better)
Translates to: LTRGDPSEAGAGRHC*RSEGQVDTRTDSRG
Trigger: GCCTCTGGAATCTGTCCTCGTGTCCACCTGGCCTTCGCTCCTCCAGCAGTGCCTGCCTGCCCCCGCTTCGCTGGGGTCTCCACGGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp AGCCTCACCCGTGGAGACCCCAGCGAAGCGGGGGCAGGCAGGCACTaGTGGAGGAGCGAAGGCCAGGTGGACACGAGGACAGATTCCAGA +
Preference number: 1 (lower is better)
Translates to: SLTRGDPSEAGAGRH*WRSEGQVDTRTDSR
Trigger: TCTGGAATCTGTCCTCGTGTCCACCTGGCCTTCGCTCCTCCAGCAGTGCCTGCCTGCCCCCGCTTCGCTGGGGTCTCCACGGGTGAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp GCTGACTTGACCAGGGAGGGACCCACGGCTGTCGCGGCCTGTGGCTaGAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCGGGTA +
Preference number: 1 (lower is better)
Translates to: ADLTREGPTAVAACG*KSAGSQSSAWSFRV
Trigger: TACCCGGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGACAGCCGTGGGTCCCTCCCTGGTCAAGTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp TTACCTGAGTCACCACAGATACCCCACAGCCTCCACAAGGCCTGCTaGCTTGACCAGGGAGGGACCCACGGCTGTCGCGGCCTGTGGCTG +
Preference number: 1 (lower is better)
Translates to: LPESPQIPHSLHKAC*LDQGGTHGCRGLWL
Trigger: CAGCCACAGGCCGCGACAGCCGTGGGTCCCTCCCTGGTCAAGTCAGCAGGCCTTGTGGAGGCTGTGGGGTATCTGTGGTGACTCAGGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp GCGAGGGGAGGAAGTGCCTCCCTTAGAAACTTGGGCCAAACCCTGTaGAGCTCTGGGACTCCACCCCACCTGACTTGGAGGCTGTGGGTC +
Preference number: 1 (lower is better)
Translates to: ARGGSASLRNLGQTL*SSGTPPHLTWRLWV
Trigger: GACCCACAGCCTCCAAGTCAGGTGGGGTGGAGTCCCAGAGCTGCACAGGGTTTGGCCCAAGTTTCTAAGGGAGGCACTTCCTCCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp GACCAGGGAGGGACCCACGGCTGTCGCGGCCTGTGGCTGAAAGTCTaGGGGCTCCCAGTCCTCAGCATGGTCATTCCGGGTAGGTTTATT +
Preference number: 1 (lower is better)
Translates to: DQGGTHGCRGLWLKV*GLPVLSMVIPGRFI
Trigger: AATAAACCTACCCGGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGACAGCCGTGGGTCCCTCCCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp CCCAACCACTCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATaGGCAAGGATGACCCCTCCAGTGGCTGGTACCCCACCATCCCAC +
Preference number: 1 (lower is better)
Translates to: PNHSSSKSLPGFWSR*ARMTPPVAGTPPSH
Trigger: GTGGGATGGTGGGGTACCAGCCACTGGAGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGAGTGGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR TCA 90 bp GCTGTGGGTCAGAGCTCTGGAAGCTCTTGGGAGCTTGGGACAGCCTaGGAGGGTCTTGTCCTCCTTTGTAGCCCTCTCCACTGTGGGTGG +
Preference number: 1 (lower is better)
Translates to: AVGQSSGSSWELGTA*EGLVLLCSPLHCGW
Trigger: CCACCCACAGTGGAGAGGGCTACAAAGGAGGACAAGACCCTCTCAGGCTGTCCCAAGCTCCCAAGAGCTTCCAGAGCTCTGACCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp GAAACTTGGGCCAAACCCTGTGCAGCTCTGGGACTCCACCCCACCTaGCTTGGAGGCTGTGGGTCAGAGCTCTGGAAGCTCTTGGGAGCT +
Preference number: 1 (lower is better)
Translates to: ETWAKPCAALGLHPT*LGGCGSELWKLLGA
Trigger: AGCTCCCAAGAGCTTCCAGAGCTCTGACCCACAGCCTCCAAGTCAGGTGGGGTGGAGTCCCAGAGCTGCACAGGGTTTGGCCCAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATaGCTGCCGAGGAGTGCTGTCAGGACAGACCATGTCCGTGCTAGG +
Preference number: 1 (lower is better)
Translates to: ILGGALTSGVFRHQP*LPRSAVRTDHVRAR
Trigger: CCTAGCACGGACATGGTCTGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR CCA 90 bp AGCTGTCACCTTCCTCCCCCAAATTCCCTGGCAAAGCAGGGAGGCTaGCTTGGGGCTGCCTCTCTGACTCTGACAGCAGTTGGAACCCAC +
Preference number: 1 (lower is better)
Translates to: SCHLPPPNSLAKQGG*LGAASLTLTAVGTH
Trigger: GTGGGTTCCAACTGCTGTCAGAGTCAGAGAGGCAGCCCCAAGCCAGCCTCCCTGCTTTGCCAGGGAATTTGGGGGAGGAAGGTGACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp TCACCTTCCTCCCCCAAATTCCCTGGCAAAGCAGGGAGGCTGGCTTaGGGCTGCCTCTCTGACTCTGACAGCAGTTGGAACCCACAGCTA +
Preference number: 1 (lower is better)
Translates to: SPSSPKFPGKAGRLA*GCLSDSDSSWNPQL
Trigger: TAGCTGTGGGTTCCAACTGCTGTCAGAGTCAGAGAGGCAGCCCCAAGCCAGCCTCCCTGCTTTGCCAGGGAATTTGGGGGAGGAAGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp CTTCTCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTaGCTTCTTGAGCTAATCTCACCCACTGTGGGCCTCAGGTTCCGC +
Preference number: 1 (lower is better)
Translates to: LLFSFPKSVALWWPL*LLELISPTVGLRFR
Trigger: GCGGAACCTGAGGCCCACAGTGGGTGAGATTAGCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp GACCAGTTTGTCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTaGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTC +
Preference number: 1 (lower is better)
Translates to: DQFVSEHCDVLGGDG*GMARVVECTRVGAL
Trigger: GAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR GCA 90 bp CAGACATTGCGCGTCTCAGTGGACAATCCAGTCCAGAAATGGGGGTaGAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGGCC +
Preference number: 1 (lower is better)
Translates to: QTLRVSVDNPVQKWG*REGLLLLLSGNSTA
Trigger: GGCCGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp GAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCACGTaGTTCTTTGTCTCACGGGTCAGGCTGAACTCGTACTGGATGGGT +
Preference number: 1 (lower is better)
Translates to: ERYVCSGTPTVPKST*FFVSRVRLNSYWMG
Trigger: ACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR CCA 90 bp TGCCCTGTTCTTCTCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTaGCCTCTGTGGCTTCTTGAGCTAATCTCACCCACTGTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: CPVLLFSFPKSVALW*PLWLLELISPTVGL
Trigger: GAGGCCCACAGTGGGTGAGATTAGCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGAGAAGAACAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp GGGCAAAGATGCCTCCTGTGGGTCTGCACAGGACATGTTTCTCCTTaGGTGTGTTGGGGACATTCCAGGCCTGAGAGTGTCCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: GQRCLLWVCTGHVSP*VCWGHSRPESVLRL
Trigger: CAGCCTCAGGACACTCTCAGGCCTGGAATGTCCCCAACACACTCAAGGAGAAACATGTCCTGTGCAGACCCACAGGAGGCATCTTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp AGCCATCACAGCCCCTTCCTGGTGCAGAGCCACACTTGGCCTCCATaGAGCTGCCACATTGGTCCTACCCACCCTCCATATGATGTGTCT +
Preference number: 1 (lower is better)
Translates to: SHHSPFLVQSHTWPP*SCHIGPTHPPYDVS
Trigger: AGACACATCATATGGAGGGTGGGTAGGACCAATGTGGCAGCTTCATGGAGGCCAAGTGTGGCTCTGCACCAGGAAGGGGCTGTGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp CATGCCCTTCCCGAGGAAGCCTCTAGATGTCAGAGATGCAGACATTaGGCGTCTCAGTGGACAATCCAGTCCAGAAATGGGGGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: HALPEEASRCQRCRH*ASQWTIQSRNGGAE
Trigger: CTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGTCTGCATCTCTGACATCTAGAGGCTTCCTCGGGAAGGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp GGAGATCCCCATGCCCTTCCCGAGGAAGCCTCTAGATGTCAGAGATaGAGACATTGCGCGTCTCAGTGGACAATCCAGTCCAGAAATGGG +
Preference number: 1 (lower is better)
Translates to: GDPHALPEEASRCQR*RHCASQWTIQSRNG
Trigger: CCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGTCTGCATCTCTGACATCTAGAGGCTTCCTCGGGAAGGGCATGGGGATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp GATGTGTCTACATCTACAGGTCCCACTGACCCCAGCTCTTCCTTGTaGCGGGCAAAGATGCCTCCTGTGGGTCTGCACAGGACATGTTTC +
Preference number: 1 (lower is better)
Translates to: DVSTSTGPTDPSSSL*RAKMPPVGLHRTCF
Trigger: GAAACATGTCCTGTGCAGACCCACAGGAGGCATCTTTGCCCGGCACAAGGAAGAGCTGGGGTCAGTGGGACCTGTAGATGTAGACACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp CAGATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCATGTaGTTCGGCCCACATGTTGGCAGTAAGCATGTTGTTCCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: QIHAKPLVHSRARAM*FGPHVGSKHVVPAR
Trigger: CCTGGCTGGAACAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp GAGATGCAGACATTGCGCGTCTCAGTGGACAATCCAGTCCAGAAATaGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCC +
Preference number: 1 (lower is better)
Translates to: EMQTLRVSVDNPVQK*GCREGLLLLLSGNS
Trigger: GGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGTCTGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp TTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGTaGTGCCTTGAGGACATGGGCATCTCCCACCCTTCGTGCTCACCC +
Preference number: 1 (lower is better)
Translates to: LSPVLSPADAFGFRK*CLEDMGISHPSCSP
Trigger: GGGTGAGCACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp GAGGAAGCCTCTAGATGTCAGAGATGCAGACATTGCGCGTCTCAGTaGACAATCCAGTCCAGAAATGGGGGTGCAGAGAGGGGCTTCTGT +
Preference number: 1 (lower is better)
Translates to: EEASRCQRCRHCASQ*TIQSRNGGAERGFC
Trigger: ACAGAAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGTCTGCATCTCTGACATCTAGAGGCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp CTCCTGCCGATGCTTTTGGATTTAGGAAGTGATGCCTTGAGGACATaGGCATCTCCCACCCTTCGTGCTCACCCTCGCAATAGTGGATGT +
Preference number: 1 (lower is better)
Translates to: LLPMLLDLGSDALRT*ASPTLRAHPRNSGC
Trigger: ACATCCACTATTGCGAGGGTGAGCACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp TGGTTCGGCCCACATGTTGGCAGTAAGCATGTTGTTCCAGCCAGGTaGGTCAGCAGACATGGGATGTTCGTTTATTTGGGCAAATGTGTC +
Preference number: 1 (lower is better)
Translates to: WFGPHVGSKHVVPAR*VSRHGMFVYLGKCV
Trigger: GACACATTTGCCCAAATAAACGAACATCCCATGTCTGCTGACTCACCTGGCTGGAACAACATGCTTACTGCCAACATGTGGGCCGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp GGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTaGAGATTCAGAGAGGGACATCAGGTTGAGGAGGCGGGAGGGATG +
Preference number: 1 (lower is better)
Translates to: GLFVSHVKTPSQHES*RFREGHQVEEAGGM
Trigger: CATCCCTCCCGCCTCCTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp ATTGTGCAGTTTTCTTTGTCCTCAATGAGATGCCATAAGCTGTGGTaGCACTATACACAGTCACAGAACAGGAAGAACCACCGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: IVQFSLSSMRCHKLW*HYTQSQNRKNHRVG
Trigger: CCCCACCCGGTGGTTCTTCCTGTTCTGTGACTGTGTATAGTGCCACCACAGCTTATGGCATCTCATTGAGGACAAAGAAAACTGCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp AAAAATGCTCAGAAACAATCATCCTACCCAGTGCTAAATATCAGATaGGTCAGCCTCTGGGCAGCTGTCACCTTCCTCCCCCAAATTCCC +
Preference number: 1 (lower is better)
Translates to: KNAQKQSSYPVLNIR*VSLWAAVTFLPQIP
Trigger: GGGAATTTGGGGGAGGAAGGTGACAGCTGCCCAGAGGCTGACTCATCTGATATTTAGCACTGGGTAGGATGATTGTTTCTGAGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp AAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCTTCACACAGTaGCGCTCATTTCCTTCCAGAAATACCTCCATACTCTTTTACTAT +
Preference number: 1 (lower is better)
Translates to: KDPIGSVTQVRGFTQ*RSFPSRNTSILFYY
Trigger: ATAGTAAAAGAGTATGGAGGTATTTCTGGAAGGAAATGAGCGGCACTGTGTGAAGCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 90 bp TTTATTGTGCAGTTTTCTTTGTCCTCAATGAGATGCCATAAGCTGTaGTGGCACTATACACAGTCACAGAACAGGAAGAACCACCGGGTG +
Preference number: 1 (lower is better)
Translates to: FIVQFSLSSMRCHKL*WHYTQSQNRKNHRV
Trigger: CACCCGGTGGTTCTTCCTGTTCTGTGACTGTGTATAGTGCCACCACAGCTTATGGCATCTCATTGAGGACAAAGAAAACTGCACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 90 bp CAGAGGCTTGGTTTTATTGTGCAGTTTTCTTTGTCCTCAATGAGATaGCATAAGCTGTGGTGGCACTATACACAGTCACAGAACAGGAAG +
Preference number: 1 (lower is better)
Translates to: QRLGFIVQFSLSSMR*HKLWWHYTQSQNRK
Trigger: CTTCCTGTTCTGTGACTGTGTATAGTGCCACCACAGCTTATGGCATCTCATTGAGGACAAAGAAAACTGCACAATAAAACCAAGCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 90 bp GATTCCAGAGGCTTGGTTTTATTGTGCAGTTTTCTTTGTCCTCAATaGGATGCCATAAGCTGTGGTGGCACTATACACAGTCACAGAACA +
Preference number: 1 (lower is better)
Translates to: DSRGLVLLCSFLCPQ*DAISCGGTIHSHRT
Trigger: TGTTCTGTGACTGTGTATAGTGCCACCACAGCTTATGGCATCTCATTGAGGACAAAGAAAACTGCACAATAAAACCAAGCCTCTGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATGGTGTGCGGAGAGGGTaGGGTGGCCGCGTGGACGTG +
Preference number: 2 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHGVRRG*GGRVDV
Trigger: CACGTCCACGCGGCCACCTCACCCTCTCCGCACACC...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATCCCCAGCCTCACCCGTaGAGACCCCAGCGAAGCGGG +
Preference number: 2 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHPQPHP*RPQRSG
Trigger: CCCGCTTCGCTGGGGTCTCCACGGGTGAGGCTGGGG...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp TCGCGGCCTGTGGCTGAAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCGCAGGGAGGCTGGCTTaGGGCTGCCTCTCTGACTCT +
Preference number: 2 (lower is better)
Translates to: SRPVAESLRAPSPQHGHSAGRLA*GCLSDS
Trigger: AGAGTCAGAGAGGCAGCCCCAAGCCAGCCTCCCTGC...GGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp CTTGGGCCAAACCCTGTGCAGCTCTGGGACTCCACCCCACCTGACTaGGAGGCTGTGGGTCAGAGCTCTGGAAGCTCTTGGGAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LGPNPVQLWDSTPPD*EAVGQSSGSSWELG
Trigger: CCCAAGCTCCCAAGAGCTTCCAGAGCTCTGACCCACAGCCTCCAAGTCAGGTGGGGTGGAGTCCCAGAGCTGCACAGGGTTTGGCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGGGTGAGGTGGCCGCGTaGACGTGGGTAGATAATCGC +
Preference number: 2 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRGEVAA*TWVDNR
Trigger: GCGATTATCTACCCACGTCCACGCGGCCACCTCACC...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR TCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCGGTGTGCGGAGAGGGTaGGGTGGCCGCGTGGACGTG +
Preference number: 2 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGGVRRG*GGRVDV
Trigger: CACGTCCACGCGGCCACCTCACCCTCTCCGCACACC...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
3UTR-3UTR TCA 90 bp AGGGACATCAGGTTGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCCGGACGCGGAAAAGCCATTTCCTaGGAAGTGTCCGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: RDIRLRRREGCVSQVPGRGKAIS*EVSGSW
Trigger: CCAGGAGCCGGACACTTCTCAGGAAATGGCTTTTCC...GCGTCCGGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp TCGCGGCCTGTGGCTGAAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCCTAGTCTCGAACTCCTaGCCTCAAGCGATCCGCCTC +
Preference number: 2 (lower is better)
Translates to: SRPVAESLRAPSPQHGHSLVSNS*PQAIRL
Trigger: GAGGCGGATCGCTTGAGGTCAGGAGTTCGAGACTAG...GGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGTCTCACGGGTCAGGCTaGACTCGTACTGGATGGGTG +
Preference number: 2 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRSHGSG*TRTGWV
Trigger: CACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGA...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGGTGGCCGCGTGGACGTaGGTAGATAATCGCATGCAG +
Preference number: 2 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRVAAWT*VDNRMQ
Trigger: CTGCATGCGATTATCTACCCACGTCCACGCGGCCAC...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CCA 90 bp TTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGACCCCTCCAGTGGCTaGTACCCCACCATCCCACTA +
Preference number: 2 (lower is better)
Translates to: FLVVPSHLGSSGTSHACRDPSSG*YPTIPL
Trigger: TAGTGGGATGGTGGGGTACCAGCCACTGGAGGGGTC...TCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGGTTTCTGGTCCCGATaGGCAAGGATGACCCCTCCA +
Preference number: 2 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAEGFWSR*ARMTPP
Trigger: TGGAGGGGTCATCCTTGCCCATCGGGACCAGAAACC...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGTCCCCAATCCTaGCTTCCCTCTTCACGAACT +
Preference number: 2 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLSGPQS*LPSSRT
Trigger: AGTTCGTGAAGAGGGAAGCCAGGATTGGGGACCTGA...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGGGTTTCTGGTCCCGATaGGCAAGGATGACCCCTCCA +
Preference number: 2 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPGFWSR*ARMTPP
Trigger: TGGAGGGGTCATCCTTGCCCATCGGGACCAGAAACC...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR CAA 90 bp CACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTaGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCCGGACGCTGT +
Preference number: 2 (lower is better)
Translates to: HLHSTKAADSERDIR*RRREGCVSQVPGRC
Trigger: ACAGCGTCCGGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR GCA 90 bp TCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTGAGCTCTCACTCCATGGCTTaGCTCAGGCCCCGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: SSPFRSPWPSGGLCGFLSSHSMA*LRPRRS
Trigger: ACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGA...GCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR GCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCCAGGCACCCCCACAGTaGCAAAGAGCACGTGCTTCT +
Preference number: 2 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTQAPPQ*QRARAS
Trigger: AGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTG...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGTCAGGTCCCCAATCCTaGCTTCCCTCTTCACGAACT +
Preference number: 2 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRSGPQS*LPSSRT
Trigger: AGTTCGTGAAGAGGGAAGCCAGGATTGGGGACCTGA...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGTCTCTCCCAGGTTTCTaGTCCCGATGGGCAAGGATG +
Preference number: 2 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPSLPGF*SRWARM
Trigger: CATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGA...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp ACAGCTCCTCCTCCTCTGTGTATGGTAACTACAGGGGTGGAAGGCAAGGCAGAGGGGAAGAGGAAGAGGTaGCGTTCCCCAGCCTCACCC +
Preference number: 2 (lower is better)
Translates to: TAPPPLCMVTTGVEGKAEGKRKR*RSPASP
Trigger: GGGTGAGGCTGGGGAACGCCACCTCTTCCTCTTCCC...CTCTGCCTTGCCTTCCACCCCTGTAGTTACCATACACAGAGGAGGAGGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGTCCGTGGCCCTCTGGTaGCCTCTGTGGCTTCTTGAG +
Preference number: 2 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTSVALW*PLWLLE
Trigger: CTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGA...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCGAGATGGGTGGGGAATaGCCAGAGTGGTGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTEMGGE*PEWWSA
Trigger: TGCACTCCACCACTCTGGCCATTCCCCACCCATCTC...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR TCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGGGGAGGGGGTCAGCTaGCTCAGAGAAGTAGGATCT +
Preference number: 2 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHGEGVS*LREVGS
Trigger: AGATCCTACTTCTCTGAGTCAGCTGACCCCCTCCCC...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTGTGGCCGCGTGGACGTaGGTAGATAATCGCATGCAG +
Preference number: 2 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPVAAWT*VDNRMQ
Trigger: CTGCATGCGATTATCTACCCACGTCCACGCGGCCAC...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp CAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACGGTGAGGTGGCCGCGTaGACGTGGGTAGATAATCGC +
Preference number: 2 (lower is better)
Translates to: QGRPQILGGALTSGVFRHGEVAA*TWVDNR
Trigger: GCGATTATCTACCCACGTCCACGCGGCCACCTCACC...GTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CCA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGCTAGCGCTGCTTTCCTaGTCAAACCTGCATCTTCAC +
Preference number: 2 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQLALLS*SNLHLH
Trigger: GTGAAGATGCAGGTTTGACCAGGAAAGCAGCGCTAG...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp CTGGAGATGCTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTaGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCC +
Preference number: 2 (lower is better)
Translates to: LEMLSSLPHKVGHKF*VVPSHLGSSGTSHA
Trigger: GGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAGCATCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR TCA 90 bp TCGCGGCCTGTGGCTGAAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCTCGTTAGGGTCATTCTaGAAAGAAGCCCAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: SRPVAESLRAPSPQHGHSSLGSF*KEAQCA
Trigger: TGCACACTGGGCTTCTTTTCAGAATGACCCTAACGA...GGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR GCA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGTTTCCTGGTCAAACCTaGATCTTCACTGGGTCATGC +
Preference number: 2 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQFPGQT*IFTGSC
Trigger: GCATGACCCAGTGAAGATGCAGGTTTGACCAGGAAA...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp CACTTGTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTaGGCAGTAAGCATGTTGTTCCAGCCAGGTGAGTCAGCAGACATG +
Preference number: 2 (lower is better)
Translates to: HLCIPEPGPCGSAHM*AVSMLFQPGESADM
Trigger: CATGTCTGCTGACTCACCTGGCTGGAACAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp ACACTTGACCAGTTTGTCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTGGGGGGAGGGGGTCAGCTaGCTCAGAGAAGTAGGATCT +
Preference number: 2 (lower is better)
Translates to: TLDQFVSEHCDVLGGDGWGEGVS*LREVGS
Trigger: AGATCCTACTTCTCTGAGTCAGCTGACCCCCTCCCC...CCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTCAAGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CCA 90 bp CATAGCTTAGCGCAGATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCAACCTGCATCTTCACTaGGTCATGCCCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: HSLAQIHAKPLVHSRARANLHLH*VMPQGL
Trigger: GAGGCCTTGGGGCATGACCCAGTGAAGATGCAGGTT...GGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAATCTGCGCTAAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCGCAAAGCAGGGAGGCTaGCTTGGGGCTGCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGAKQGG*LGAASL
Trigger: CAGAGAGGCAGCCCCAAGCCAGCCTCCCTGCTTTGC...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp AATCCAGTCCAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTaGAGCGGGAATTCCACGGCCCTAGGTATGGACTTAGGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: NPVQKWGCREGLLLL*SGNSTALGMDLGAE
Trigger: TTCAGCACCTAAGTCCATACCTAGGGCCGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp TATGATGTGTCTACATCTACAGGTCCCACTGACCCCAGCTCTTCCTaGTGCCGGGCAAAGATGCCTCCTGTGGGTCTGCACAGGACATGT +
Preference number: 2 (lower is better)
Translates to: YDVSTSTGPTDPSSS*CRAKMPPVGLHRTC
Trigger: ACATGTCCTGTGCAGACCCACAGGAGGCATCTTTGCCCGGCACAAGGAAGAGCTGGGGTCAGTGGGACCTGTAGATGTAGACACATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGGTGAGTCAGCAGACATaGGATGTTCGTTTATTTGGG +
Preference number: 2 (lower is better)
Translates to: KMPFLGTALAAQAGLKERVSQQT*DVRLFG
Trigger: CCCAAATAAACGAACATCCCATGTCTGCTGACTCAC...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp CAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGTGATGCCTaGAGGACATGGGCATCTCCCACCCTTCGTGCTCACCCTCGCAAT +
Preference number: 2 (lower is better)
Translates to: QSFLLPMLLDLGSDA*RTWASPTLRAHPRN
Trigger: ATTGCGAGGGTGAGCACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCGAGCTTGGGACAGCCTaGGAGGGTCTTGTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGELGTA*EGLVLL
Trigger: AAGGAGGACAAGACCCTCTCAGGCTGTCCCAAGCTC...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp CCTCCCCTTGGAGAGCTCTGGGCTGGCAGCATCTTGCTAAGGGGTTGTCAGCCTTTTCTTTGTCCTCAATaGGATGCCATAAGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: PPLGELWAGSILLRGCQPFLCPQ*DAISCG
Trigger: ACCACAGCTTATGGCATCTCATTGAGGACAAAGAAA...AGGCTGACAACCCCTTAGCAAGATGCTGCCAGCCCAGAGCTCTCCAAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR GCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCACTACCCCTCACATaGTCTCACTCTCCATCAGGT +
Preference number: 2 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGPLPLT*SHSPSG
Trigger: ACCTGATGGAGAGTGAGAGCATGTGAGGGGTAGTGG...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR GCA 90 bp ACACTTGACCAGTTTGTCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTGGGTGCCAAAGAGCACGTaGTTCTTTGTCTCACGGGTC +
Preference number: 2 (lower is better)
Translates to: TLDQFVSEHCDVLGGDGWVPKST*FFVSRV
Trigger: GACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCAC...CCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTCAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR CAA 90 bp CGAAGGGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTaGGATTTAGGAAGTGATGCCTTGAGGACATGGGCATCTCCCACC +
Preference number: 2 (lower is better)
Translates to: RRDSICPQSFLLPML*DLGSDALRTWASPT
Trigger: GGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 90 bp CCTCTGTGTATGGTAACTACAGGGGTGGAAGGCAAGGCAGAGAAGTaGACGGGAGGTAGCAAGAGTGGGAGCCGGTGGCATAATTTAGAT +
Preference number: 2 (lower is better)
Translates to: PLCMVTTGVEGKAEK*TGGSKSGSRWHNLD
Trigger: ATCTAAATTATGCCACCGGCTCCCACTCTTGCTACCTCCCGTCAACTTCTCTGCCTTGCCTTCCACCCCTGTAGTTACCATACACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp GGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGGGGGAGGGGGTCAGCTaGCTCAGAGAAGTAGGATCT +
Preference number: 2 (lower is better)
Translates to: GQYLSPVLSPADAFGFRKGEGVS*LREVGS
Trigger: AGATCCTACTTCTCTGAGTCAGCTGACCCCCTCCCC...CTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCCTCCACAAGGCCTGCTaGCTTGACCAGGGAGGGACC +
Preference number: 2 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCLHKAC*LDQGGT
Trigger: GGTCCCTCCCTGGTCAAGTCAGCAGGCCTTGTGGAG...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp ACACTTGACCAGTTTGTCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTGGTGTTGTATTTGCTGGTaGAGTTGGTTCGGGAGCGGT +
Preference number: 2 (lower is better)
Translates to: TLDQFVSEHCDVLGGDGWCCICW*SWFGSG
Trigger: ACCGCTCCCGAACCAACTTCACCAGCAAATACAACA...CCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTCAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CCA 90 bp TCGCGGCCTGTGGCTGAAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCAGACAGAAGCAGCTCTaGAACAAAAAGTACAAAAAG +
Preference number: 2 (lower is better)
Translates to: SRPVAESLRAPSPQHGHSRQKQL*NKKYKK
Trigger: CTTTTTGTACTTTTTGTTCCAGAGCTGCTTCTGTCT...GGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCAAGCTCTTGGGAGCTTaGGACAGCCTGAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGKLLGA*DSLRGS
Trigger: AGACCCTCTCAGGCTGTCCCAAGCTCCCAAGAGCTT...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCGGAAGAACCACCGGGTaGGGGCTGGGGGTTGGGAAA +
Preference number: 2 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCGRTTG*GLGVGK
Trigger: TTTCCCAACCCCCAGCCCCCACCCGGTGGTTCTTCC...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp AAGACACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTTGAGGATGCCTTGAGGACATaGGCATCTCCCACCCTTCGT +
Preference number: 2 (lower is better)
Translates to: KTPSQHESCRFREGHQVEDALRT*ASPTLR
Trigger: ACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATC...CTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR TCA 90 bp AAGACACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTTGAGGCCTCTGTGGCTTCTTaGGCTAATCTCACCCACTGT +
Preference number: 2 (lower is better)
Translates to: KTPSQHESCRFREGHQVEASVAS*ANLTHC
Trigger: ACAGTGGGTGAGATTAGCTCAAGAAGCCACAGAGGC...CTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR GCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCCCACTACCCCTCACATaGTCTCACTCTCCATCAGGT +
Preference number: 2 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGPLPLT*SHSPSG
Trigger: ACCTGATGGAGAGTGAGAGCATGTGAGGGGTAGTGG...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp GGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGTGTGGGTCAGAGCTCTaGAAGCTCTTGGGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: GQYLSPVLSPADAFGFRKCGSEL*KLLGAW
Trigger: CCAAGCTCCCAAGAGCTTCCAGAGCTCTGACCCACA...CTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCCCTCCCTTAGAAACTTaGGCCAAACCCTGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCPPLET*AKPCAA
Trigger: AGCTGCACAGGGTTTGGCCCAAGTTTCTAAGGGAGG...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCAGGCTGAACTCGTACTaGATGGGTGAACTGCTGGTA +
Preference number: 2 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTRLNSY*MGELLV
Trigger: TACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCT...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR GCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCTCTAGATGTCAGAGATaGAGACATTGCGCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCSRCQR*RHCASQ
Trigger: CTGAGACGCGCAATGTCTGCATCTCTGACATCTAGA...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR GCA 90 bp GGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGGGCTTGGTTTTATTGTaGAGTTTTCTTTGTCCTCAA +
Preference number: 2 (lower is better)
Translates to: GQYLSPVLSPADAFGFRKGLVLL*SFLCPQ
Trigger: TTGAGGACAAAGAAAACTGCACAATAAAACCAAGCC...CTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp ACCAGGGAGGGACCCACGGCTGTCGCGGCCTGTGGCTaGAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCA +
Preference number: 3 (lower is better)
Translates to: TREGPTAVAACG*KSAGSQSSAWS
Trigger: TGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGACAGCCGTGGGTCCCTCCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp GGGACCCACGGCTGTCGCGGCCTGTGGCTGAAAGTCTaGGGGCTCCCAGTCCTCAGCATGGTCATTCCGGGT +
Preference number: 3 (lower is better)
Translates to: GTHGCRGLWLKV*GLPVLSMVIPG
Trigger: ACCCGGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGACAGCCGTGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp GCCAAACCCTGTGCAGCTCTGGGACTCCACCCCACCTaGCTTGGAGGCTGTGGGTCAGAGCTCTGGAAGCTC +
Preference number: 3 (lower is better)
Translates to: AKPCAALGLHPT*LGGCGSELWKL
Trigger: GAGCTTCCAGAGCTCTGACCCACAGCCTCCAAGTCAGGTGGGGTGGAGTCCCAGAGCTGCACAGGGTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp GGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATaGCTGCCGAGGAGTGCTGTCAGGACAGACCATGTC +
Preference number: 3 (lower is better)
Translates to: GALTSGVFRHQP*LPRSAVRTDHV
Trigger: GACATGGTCTGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR CCA 72 bp GATGGGCGAGGGGAGGAAGTGCCTCCCTTAGAAACTTaGGCCAAACCCTGTGCAGCTCTGGGACTCCACCCC +
Preference number: 3 (lower is better)
Translates to: DGRGEEVPPLET*AKPCAALGLHP
Trigger: GGGGTGGAGTCCCAGAGCTGCACAGGGTTTGGCCCAAGTTTCTAAGGGAGGCACTTCCTCCCCTCGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp GAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTaGGCTAATCTCACCCACTGTGGGCCTCAGGTTCCG +
Preference number: 3 (lower is better)
Translates to: EVRGPLVASVAS*ANLTHCGPQVP
Trigger: CGGAACCTGAGGCCCACAGTGGGTGAGATTAGCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp TCTTCTCACCAAGATGCCTTTCCTTGGCACGGCGCTTaGAGCCCAAGCAGGGCTGAAGGAGAGGGGCCTGAG +
Preference number: 3 (lower is better)
Translates to: SSHQDAFPWHGA*SPSRAEGEGPE
Trigger: CTCAGGCCCCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTTGGTGAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CAA 90 bp GGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCACGTGTCTCTGCACTGGAACTaGAGGCTTCCTGTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GSGAVCVLRHPHSAKEHVSLHWN*RLPVSS
Trigger: GGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGA...CACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CAA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGTCTCTGCACTGGAACTaGAGGCTTCCTGTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAESLHWN*RLPVSS
Trigger: GGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGA...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR-3UTR CAA 90 bp ATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCAGTCTCACTCCATGGCTaGCCTCAGGCCCCGCAGAAG +
Preference number: 3 (lower is better)
Translates to: IHAKPLVHSRARAMWFGPVSLHG*PQAPQK
Trigger: CTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGAC...TGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp GGAACCAGGGCTGGGGGCCAGCCCTCTATAATTACCTaGGTCACCACAGATACCCCACAGCCTCCACAAGGC +
Preference number: 3 (lower is better)
Translates to: GTRAGGQPSIIT*VTTDTPQPPQG
Trigger: GCCTTGTGGAGGCTGTGGGGTATCTGTGGTGACTCAGGTAATTATAGAGGGCTGGCCCCCAGCCCTGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp GGAAGTGCCTCCCTTAGAAACTTGGGCCAAACCCTGTaGAGCTCTGGGACTCCACCCCACCTGACTTGGAGG +
Preference number: 3 (lower is better)
Translates to: GSASLRNLGQTL*SSGTPPHLTWR
Trigger: CCTCCAAGTCAGGTGGGGTGGAGTCCCAGAGCTGCACAGGGTTTGGCCCAAGTTTCTAAGGGAGGCACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp GGAGGAGATGGGTGGGGAATGGCCAGAGTGGTGGAGTaGACACGTGTAGGTGCCCTCGTCCTTGCTAGTGAA +
Preference number: 3 (lower is better)
Translates to: GGDGWGMARVVE*TRVGALVLASE
Trigger: TTCACTAGCAAGGACGAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR CCA 72 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATaGGCAAGGATGACCCCTCCAGTGGCTGGTACCCCA +
Preference number: 3 (lower is better)
Translates to: SSSKSLPGFWSR*ARMTPPVAGTP
Trigger: TGGGGTACCAGCCACTGGAGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR CCA 72 bp GGGCAGGCAGGCACTGCTGGAGGAGCGAAGGCCAGGTaGACACGAGGACAGATTCCAGAGGCTTGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: GQAGTAGGAKAR*TRGQIPEAWFY
Trigger: ATAAAACCAAGCCTCTGGAATCTGTCCTCGTGTCCACCTGGCCTTCGCTCCTCCAGCAGTGCCTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp TCCCCCAAATTCCCTGGCAAAGCAGGGAGGCTGGCTTaGGGCTGCCTCTCTGACTCTGACAGCAGTTGGAAC +
Preference number: 3 (lower is better)
Translates to: SPKFPGKAGRLA*GCLSDSDSSWN
Trigger: GTTCCAACTGCTGTCAGAGTCAGAGAGGCAGCCCCAAGCCAGCCTCCCTGCTTTGCCAGGGAATTTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp CTTCCTCCCCCAAATTCCCTGGCAAAGCAGGGAGGCTaGCTTGGGGCTGCCTCTCTGACTCTGACAGCAGTT +
Preference number: 3 (lower is better)
Translates to: LPPPNSLAKQGG*LGAASLTLTAV
Trigger: AACTGCTGTCAGAGTCAGAGAGGCAGCCCCAAGCCAGCCTCCCTGCTTTGCCAGGGAATTTGGGGGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CAA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATGAGCTCTGGAAGCTCTaGGGAGCTTGGGACAGCCTG +
Preference number: 3 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHELWKL*GAWDSL
Trigger: CAGGCTGTCCCAAGCTCCCAAGAGCTTCCAGAGCTC...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CAA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCTCTCTGCACTGGAACTaGAGGCTTCCTGTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTSLHWN*RLPVSS
Trigger: GGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGA...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
3UTR GCA 72 bp GTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCACGTaGTTCTTTGTCTCACGGGTCAGGCTGAACTCGTAC +
Preference number: 3 (lower is better)
Translates to: VCSGTPTVPKST*FFVSRVRLNSY
Trigger: GTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR-3UTR CAA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGTTCACGCAAAGCCACTaGTGCATTCCAGAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTFTQSH*CIPEPG
Trigger: CCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAA...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp CGCGTCTCAGTGGACAATCCAGTCCAGAAATGGGGGTaGAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAAT +
Preference number: 3 (lower is better)
Translates to: RVSVDNPVQKWG*REGLLLLLSGN
Trigger: ATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp GTCACAGGTCCCCGGACGCTGTGTAGATTTCTTGGTTaGCCAGTGAAAGTCCCCACATCTCACGGAGATCCC +
Preference number: 3 (lower is better)
Translates to: VTGPRTLCRFLG*PVKVPTSHGDP
Trigger: GGGATCTCCGTGAGATGTGGGGACTTTCACTGGCCAACCAAGAAATCTACACAGCGTCCGGGGACCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp CACTTGACCAGTTTGTCTCTGAGCACTGTGACGTTCTaGGAGGAGATGGGTGGGGAATGGCCAGAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: HLTSLSLSTVTF*EEMGGEWPEWW
Trigger: CCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR CCA 72 bp CTTCTCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTaGCCTCTGTGGCTTCTTGAGCTAATCTCACCCACT +
Preference number: 3 (lower is better)
Translates to: LLFSFPKSVALW*PLWLLELISPT
Trigger: AGTGGGTGAGATTAGCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp ACATTGCGCGTCTCAGTGGACAATCCAGTCCAGAAATaGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGC +
Preference number: 3 (lower is better)
Translates to: TLRVSVDNPVQK*GCREGLLLLLS
Trigger: GCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp GCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCATGTaGTTCGGCCCACATGTTGGCAGTAAGCATGTTGTT +
Preference number: 3 (lower is better)
Translates to: AKPLVHSRARAM*FGPHVGSKHVV
Trigger: AACAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp AAATTCAGGAAACTGCTTTATTGCAAACTTGACAGGTaGCCTCCACCTGGCCACGCCACTGCCAGGCACTCC +
Preference number: 3 (lower is better)
Translates to: KFRKLLYCKLDR*PPPGHATARHS
Trigger: GGAGTGCCTGGCAGTGGCGTGGCCAGGTGGAGGCCACCTGTCAAGTTTGCAATAAAGCAGTTTCCTGAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CAA 90 bp ACAGCTCCTCCTCCTCTGTGTATGGTAACTACAGGGGTGGAAGGCAAGGCAGAGGTTGCTACTAAGTGGTaGGGGAGAAGTCAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: TAPPPLCMVTTGVEGKAEVATKW*GRSQGR
Trigger: TCTTCCCTGACTTCTCCCCAACCACTTAGTAGCAAC...CTCTGCCTTGCCTTCCACCCCTGTAGTTACCATACACAGAGGAGGAGGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp GTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGTaGTGCCTTGAGGACATGGGCATCTCCCACCCTTCG +
Preference number: 3 (lower is better)
Translates to: VLSPADAFGFRK*CLEDMGISHPS
Trigger: CGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp TCTAGATGTCAGAGATGCAGACATTGCGCGTCTCAGTaGACAATCCAGTCCAGAAATGGGGGTGCAGAGAGG +
Preference number: 3 (lower is better)
Translates to: SRCQRCRHCASQ*TIQSRNGGAER
Trigger: CCTCTCTGCACCCCCATTTCTGGACTGGATTGTCCACTGAGACGCGCAATGTCTGCATCTCTGACATCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp ATGCTTTTGGATTTAGGAAGTGATGCCTTGAGGACATaGGCATCTCCCACCCTTCGTGCTCACCCTCGCAAT +
Preference number: 3 (lower is better)
Translates to: MLLDLGSDALRT*ASPTLRAHPRN
Trigger: ATTGCGAGGGTGAGCACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CAA 90 bp GGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGGTAGGCCACAAATTCTaGGTGGTGCCCTCACATCTG +
Preference number: 3 (lower is better)
Translates to: GQYLSPVLSPADAFGFRKVGHKF*VVPSHL
Trigger: CAGATGTGAGGGCACCACCAAGAATTTGTGGCCTAC...CTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR-3UTR CAA 90 bp ATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCAACAGATTCCAGAGGCTaGGTTTTATTGTGCAGTTTT +
Preference number: 3 (lower is better)
Translates to: IHAKPLVHSRARAMWFGPTDSRG*VLLCSF
Trigger: AAAACTGCACAATAAAACCAAGCCTCTGGAATCTGT...TGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp CCACATGTTGGCAGTAAGCATGTTGTTCCAGCCAGGTaGGTCAGCAGACATGGGATGTTCGTTTATTTGGGC +
Preference number: 3 (lower is better)
Translates to: PHVGSKHVVPAR*VSRHGMFVYLG
Trigger: GCCCAAATAAACGAACATCCCATGTCTGCTGACTCACCTGGCTGGAACAACATGCTTACTGCCAACATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR TCA 72 bp CGGATAAGTAGAGGACCTTCATGTTGTATTTGCTGGTaGAGTTGGTTCGGGAGCGGTATGTGTGCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: RISRGPSCCICW*SWFGSGMCAQA
Trigger: TGCCTGAGCACACATACCGCTCCCGAACCAACTTCACCAGCAAATACAACATGAAGGTCCTCTACTTATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
3UTR GCA 72 bp ATAGGAAGTGTCACACAGGTGCGAGGCTTCACACAGTaGCGCTCATTTCCTTCCAGAAATACCTCCATACTC +
Preference number: 3 (lower is better)
Translates to: IGSVTQVRGFTQ*RSFPSRNTSIL
Trigger: GAGTATGGAGGTATTTCTGGAAGGAAATGAGCGGCACTGTGTGAAGCCTCGCACCTGTGTGACACTTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR GCA 72 bp GTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTaGAGATTCAGAGAGGGACATCAGGTTGAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: VSHVKTPSQHES*RFREGHQVEEA
Trigger: CGCCTCCTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp GAGAAGTTGACGGGAGGTAGCAAGAGTGGGAGCCGGTaGCATAATTTAGATCTGAGGCCTTTAAGAAAAATG +
Preference number: 3 (lower is better)
Translates to: EKLTGGSKSGSR*HNLDLRPLRKM
Trigger: CATTTTTCTTAAAGGCCTCAGATCTAAATTATGCCACCGGCTCCCACTCTTGCTACCTCCCGTCAACTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp TTTTCTTTGTCCTCAATGAGATGCCATAAGCTGTGGTaGCACTATACACAGTCACAGAACAGGAAGAACCAC +
Preference number: 3 (lower is better)
Translates to: FSLSSMRCHKLW*HYTQSQNRKNH
Trigger: GTGGTTCTTCCTGTTCTGTGACTGTGTATAGTGCCACCACAGCTTATGGCATCTCATTGAGGACAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CCA 72 bp CAGTTTTCTTTGTCCTCAATGAGATGCCATAAGCTGTaGTGGCACTATACACAGTCACAGAACAGGAAGAAC +
Preference number: 3 (lower is better)
Translates to: QFSLSSMRCHKL*WHYTQSQNRKN
Trigger: GTTCTTCCTGTTCTGTGACTGTGTATAGTGCCACCACAGCTTATGGCATCTCATTGAGGACAAAGAAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGGGTGTGCGGAGAGGGTaGGGTGGCCGCGTGGACGTG +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLGVRRG*GGRVDV
Trigger: CACGTCCACGCGGCCACCTCACCCTCTCCGCACACC...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGGCCACAGAAGGGGCGTaGACCCGCGAGAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEEATEGA*TRESAQ
Trigger: CTGCGCGCTCTCGCGGGTGCACGCCCCTTCTGTGGC...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp TCGCGGCCTGTGGCTGAAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCACCTGGCCACGCCACTaGCAGGCACTCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRPVAESLRAPSPQHGHSTWPRH*QALPAC
Trigger: GCAGGCGGGGAGTGCCTGGCAGTGGCGTGGCCAGGT...GGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCCTGTCTCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGGTGTGCGGAGAGGGTaGGGTGGCCGCGTGGACGTG +
Preference number: 4 (lower is better)
Translates to: SCLLHGPHQSQGHEIRGLGVRRG*GGRVDV
Trigger: CACGTCCACGCGGCCACCTCACCCTCTCCGCACACC...CAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGAGACAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR TCA 90 bp TTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGGCATTGCCTCGGTTaGGTGCGCCCGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: FLVVPSHLGSSGTSHACRGHCLG*VRPGAQ
Trigger: CTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCC...TCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGCCCCAGCCTCACCCGTaGAGACCCCAGCGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: KMPFLGTALAAQAGLKERPQPHP*RPQRSG
Trigger: CCCGCTTCGCTGGGGTCTCCACGGGTGAGGCTGGGG...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATGGGCAGGGGGCTGTCTaGGGGGCTCAGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHGQGAV*GAQAPA
Trigger: GGCTGGTGCCTGAGCCCCTCAGACAGCCCCCTGCCC...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp TTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGACAGGCACTCCCCGCCTaGACTGCTGGGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLVVPSHLGSSGTSHACRQALPA*TAGHLQ
Trigger: CTGGAGGTGCCCAGCAGTGCAGGCGGGGAGTGCCTG...TCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGTTGAGTGCGCCCGGGTaGGCAGGGCGCACCACTAGA +
Preference number: 4 (lower is better)
Translates to: LTSGVFRHQPCLPRSAVRLSAPG*AGRTTR
Trigger: TCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAA...CCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAEGRPLG*SPSALG
Trigger: CCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCC...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGGCAAAGCAGGGAGGCTaGCTTGGGGCTGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEEAKQGG*LGAASL
Trigger: CAGAGAGGCAGCCCCAAGCCAGCCTCCCTGCTTTGC...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGCAGGTGGCCTCCACCTaGCCACGCCACTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPQVAST*PRHCQA
Trigger: TGCCTGGCAGTGGCGTGGCCAGGTGGAGGCCACCTG...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATTGGCGCTCAGCCCCTTaGCGGGTGAGGCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHWRSAP*RVRLGS
Trigger: GGATCCTAGCCTCACCCGTCAAGGGGCTGAGCGCCA...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGACTGGGGTCTTCCGCTaGTGCAGCCTCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAETGVFR*CSLLQT
Trigger: CGTCTGGAGGAGGCTGCAGCAGCGGAAGACCCCAGT...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GGGTGGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTCGTCCTTACTGGGGTCTTCCGCTaGTGCAGCCTCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: GWGMARVVECTRVGALVLTGVFR*CSLLQT
Trigger: CGTCTGGAGGAGGCTGCAGCAGCGGAAGACCCCAGT...AAGGACGAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR GCA 90 bp CTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGCCTTGGCACGGCGCTTaGAGCCCAAGCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LTSGVFRHQPCLPRSAVRPWHGA*SPSRAE
Trigger: TTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGG...CCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATGTCCCGGGGTGGAGCTaGTGCCCTGAGCCAGATCCA +
Preference number: 4 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHVPGWS*CPEPDP
Trigger: TGGATCTGGCTCAGGGCAGCAGCTCCACCCCGGGAC...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGCTATCTGCAGAGCAGTaGTCGCCCAGGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLLSAEQ*SPRRGH
Trigger: GTGGCCTCTCCTGGGCGAGCACTGCTCTGCAGATAG...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTTCCTGTCTCCTCCATaGGCCCCACCAGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLFLSPP*APPVTG
Trigger: CCCTGTGACTGGTGGGGCCCATGGAGGAGACAGGAA...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTGGTGCCCTCACATCTaGGGTCTTCAGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLWCPHI*GLQAPA
Trigger: GGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCA...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAGGCTGTCGCGGCCTGTaGCTGAAAGTCTGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTGCRGL*LKVCGL
Trigger: GAGCCCGCAGACTTTCAGCCACAGGCCGCGACAGCC...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGCTGGCCAGGACTCTCTaGAGGACTCCAGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEELARTL*RTPAPT
Trigger: TGTTGGAGCTGGAGTCCTTCAGAGAGTCCTGGCCAG...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CCTCCACTAGCGCTGCTTTCCTGGTCAAACCTGCATCTTCACTGGGTCATGCCCGGGGTCTTCCGCTGCTaGAGCCTCCTCCAGACGCGC +
Preference number: 4 (lower is better)
Translates to: PPLALLSWSNLHLHWVMPGVFRC*SLLQTR
Trigger: GCGCGTCTGGAGGAGGCTGCAGCAGCGGAAGACCCC...GGGCATGACCCAGTGAAGATGCAGGTTTGACCAGGAAAGCAGCGCTAGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDRLVTF*PRETCK
Trigger: CTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCT...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp GGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCACGTGGCCAGAGTGGTGGAGTaGACACGTGTAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSGAVCVLRHPHSAKEHVARVVE*TRVGAL
Trigger: GAGGGCACCTACACGTGTGCACTCCACCACTCTGGC...CACGTGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR GCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGCTGCGGTCCCCCTCTTaGCCCCAATCCCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: KMPFLGTALAAQAGLKERLRSPS*PQSQDA
Trigger: AGCATCCTGGGATTGGGGGCAAGAGGGGGACCGCAG...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp AGGGACATCAGGTTGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCCGGACGCATGAAATCCGTGGCCTaGAGGAGGGAGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RDIRLRRREGCVSQVPGRMKSVA*RRERES
Trigger: GCTCTCCCTCTCCCTCCTCCAGGCCACGGATTTCAT...GCGTCCGGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGGTGGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTCGTCCTTGGTGAGGTGGCCGCGTaGACGTGGGTAGATAATCGC +
Preference number: 4 (lower is better)
Translates to: GWGMARVVECTRVGALVLGEVAA*TWVDNR
Trigger: GCGATTATCTACCCACGTCCACGCGGCCACCTCACC...AAGGACGAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACGACCCCTCCAGTGGCTaGTACCCCACCATCCCACTA +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDDPSSG*YPTIPL
Trigger: TAGTGGGATGGTGGGGTACCAGCCACTGGAGGGGTC...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp AGGGACATCAGGTTGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCCGGACGCGGTTTCTGGTCCCGATaGGCAAGGATGACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RDIRLRRREGCVSQVPGRGFWSR*ARMTPP
Trigger: TGGAGGGGTCATCCTTGCCCATCGGGACCAGAAACC...GCGTCCGGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGGGTTTCTGGTCCCGATaGGCAAGGATGACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLGFWSR*ARMTPP
Trigger: TGGAGGGGTCATCCTTGCCCATCGGGACCAGAAACC...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp TTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAAGAACCACCGGGTaGGGGCTGGGGGTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: FLVVPSHLGSSGTSHACRGRTTG*GLGVGK
Trigger: TTTCCCAACCCCCAGCCCCCACCCGGTGGTTCTTCC...TCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCGGGTGTTCCTCCCCTTaGAGAGCTCTGGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSGCSSP*RALGWQ
Trigger: CTGCCAGCCCAGAGCTCTCCAAGGGGAGGAACACCC...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRAGERC*WPGSWF
Trigger: GAACCATGAACCTGGCCATCAGCATCGCTCTCCTGC...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR TCA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGGGAAAAGCCATTTCCTaGGAAGTGTCCGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEEGKAIS*EVSGSW
Trigger: CCAGGAGCCGGACACTTCTCAGGAAATGGCTTTTCC...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAAGAGGGACATCAGGTTaGGGAGGCGGGAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTRGTSG*GGGRDV
Trigger: CACATCCCTCCCGCCTCCTCAACCTGATGTCCCTCT...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCGCCAGAGTGGTGGAGTaGACACGTGTAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSARVVE*TRVGAL
Trigger: GAGGGCACCTACACGTGTGCACTCCACCACTCTGGC...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAACAGCCCCTTCCTGGTaGAGAGCCACACTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTTAPSW*RATLGL
Trigger: GAGGCCAAGTGTGGCTCTGCACCAGGAAGGGGCTGT...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTACTCCCCGCCTGCACTaGTGGGCACCTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPTPRLH*WAPPAI
Trigger: GATGGCTGGAGGTGCCCAGCAGTGCAGGCGGGGAGT...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGTCTCAGTCCTGGATCTaGACTGGGGTCTTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRSQSWI*TGVFRC
Trigger: GCAGCGGAAGACCCCAGTCCAGATCCAGGACTGAGA...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGGAGATGGGTGGGGAATaGCCAGAGTGGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRREMGGE*PEWWSA
Trigger: TGCACTCCACCACTCTGGCCATTCCCCACCCATCTC...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp TCCTGTCTCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGTTCCTGTCTCCTCCATaGGCCCCACCAGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: SCLLHGPHQSQGHEIRGLFLSPP*APPVTG
Trigger: CCCTGTGACTGGTGGGGCCCATGGAGGAGACAGGAA...CAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGAGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGTGCAAACTTGACAGGTaGCCTCCACCTGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: KMPFLGTALAAQAGLKERCKLDR*PPPGHA
Trigger: GGCGTGGCCAGGTGGAGGCCACCTGTCAAGTTTGCA...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGGGGGTGGAGAGCGGCTaGGGAGGTGCAGTCTGTATT +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPGVESG*GGAVCI
Trigger: AATACAGACTGCACCTCCCCAGCCGCTCTCCACCCC...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGGGGAAGGGGGAGCAATaGCCAGAGCAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLGKGEQ*PEQERE
Trigger: TTCCCTTTCTTGCTCTGGCCATTGCTCCCCCTTCCC...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGGCTCTCTGGAGTTCCTaGGACTGCAGTTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEEALWSS*DCSFPA
Trigger: GGCTGGAAAACTGCAGTCCCAGGAACTCCAGAGAGC...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
3UTR CAA 72 bp GAGCCCCTGTTGAGCAGAAGAGAGCTGATGGCCCTCTaGCCTGGCCAGGACTCTCTGAAGGACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EPLLSRRELMAL*PGQDSLKDSSS
Trigger: GGAGCTGGAGTCCTTCAGAGAGTCCTGGCCAGGCAAGAGGGCCATCAGCTCTCTTCTGCTCAACAGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCGGGGAGGGGGTCAGCTaGCTCAGAGAAGTAGGATCT +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSGEGVS*LREVGS
Trigger: AGATCCTACTTCTCTGAGTCAGCTGACCCCCTCCCC...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR TCA 90 bp AGCTTCCTTAGGCAGGGAGGGATGATGAACCCTCATCCTTTACCTCCTTCTCCAGGTGTGCGGAGAGGGTaGGGTGGCCGCGTGGACGTG +
Preference number: 4 (lower is better)
Translates to: SFLRQGGMMNPHPLPPSPGVRRG*GGRVDV
Trigger: CACGTCCACGCGGCCACCTCACCCTCTCCGCACACC...TGGAGAAGGAGGTAAAGGATGAGGGTTCATCATCCCTCCCTGCCTAAGGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCGCGGCCTGTGGCTGAAAGTCTGCGGGCTCCCAGTCCTCAGCATGGTCATTCCGTTGTTCCAGCCAGGTaGGTCAGCAGACATGGGATG +
Preference number: 4 (lower is better)
Translates to: SRPVAESLRAPSPQHGHSVVPAR*VSRHGM
Trigger: CATCCCATGTCTGCTGACTCACCTGGCTGGAACAAC...GGAATGACCATGCTGAGGACTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCGGGGTCTTCCGCTGCTaGAGCCTCCTCCAGACGCGC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGGVFRC*SLLQTR
Trigger: GCGCGTCTGGAGGAGGCTGCAGCAGCGGAAGACCCC...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528295.5
CDS-3UTR GCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCCAGGCACCCCCACAGTaGCAAAGAGCACGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSQAPPQ*QRARAS
Trigger: AGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTG...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCGCCAGAGTGGTGGAGTaGACACGTGTAGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTARVVE*TRVGAL
Trigger: GAGGGCACCTACACGTGTGCACTCCACCACTCTGGC...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGCCACTACCCCTCACATaGTCTCACTCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEEPLPLT*SHSPSG
Trigger: ACCTGATGGAGAGTGAGAGCATGTGAGGGGTAGTGG...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCTCACGGAGATCCCCATaGCCTTCCCGAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTSRRSP*PSRGSL
Trigger: GAGGCTTCCTCGGGAAGGGCATGGGGATCTCCGTGA...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CCTCCCCTTGGAGAGCTCTGGGCTGGCAGCATCTTGCTAAGGGGTTGTCAGCCTCCCAGCTCTTCCTTGTaGCGGGCAAAGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPLGELWAGSILLRGCQPPSSSL*RAKMPP
Trigger: AGGAGGCATCTTTGCCCGGCACAAGGAAGAGCTGGG...AGGCTGACAACCCCTTAGCAAGATGCTGCCAGCCCAGAGCTCTCCAAGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCATTGCCTCGGTTGAGTaGGCCCGGGTGCGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGIASVE*ARVRRA
Trigger: CGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAAT...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp AGTTGGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCAGTCCTGGATCTGGACTaGGGTCTTCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SWFGSGMCAQAPPQCQRAVLDLD*GLPLLQ
Trigger: CTGCAGCAGCGGAAGACCCCAGTCCAGATCCAGGAC...TGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATTCTCAGTCCTGGATCTaGACTGGGGTCTTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHSQSWI*TGVFRC
Trigger: GCAGCGGAAGACCCCAGTCCAGATCCAGGACTGAGA...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGTCCAGACGAAGGCTCTaGTCCACTAGGCAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPSRRRL*STRQAV
Trigger: AACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGA...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATGAGATGGGTGGGGAATaGCCAGAGTGGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHEMGGE*PEWWSA
Trigger: TGCACTCCACCACTCTGGCCATTCCCCACCCATCTC...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAGCACTGTGACGTTCTaGGAGGAGATGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDSTVTF*EEMGGE
Trigger: TTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCT...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAATGAAATCCGTGGCCTaGAGGAGGGAGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTMKSVA*RRERES
Trigger: GCTCTCCCTCTCCCTCCTCCAGGCCACGGATTTCAT...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGGTGGCCGCGTGGACGTaGGTAGATAATCGCATGCAG +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPVAAWT*VDNRMQ
Trigger: CTGCATGCGATTATCTACCCACGTCCACGCGGCCAC...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp TTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGTGGCCGCGTGGACGTaGGTAGATAATCGCATGCAG +
Preference number: 4 (lower is better)
Translates to: FLVVPSHLGSSGTSHACRVAAWT*VDNRMQ
Trigger: CTGCATGCGATTATCTACCCACGTCCACGCGGCCAC...TCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACATGGAGAGCTCTGGGCTaGCAGCATCTTGCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTWRALG*QHLAKG
Trigger: CCCCTTAGCAAGATGCTGCCAGCCCAGAGCTCTCCA...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGATCACAGCCCCTTCCTaGTGCAGAGCCACACTTGGC +
Preference number: 4 (lower is better)
Translates to: KMPFLGTALAAQAGLKERITAPS*CRATLG
Trigger: GCCAAGTGTGGCTCTGCACCAGGAAGGGGCTGTGAT...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGGATGTTGTGCGGGCTTaGGATCTAGGAGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPDVVRA*DLGGEG
Trigger: CCCTTCCCCTCCTAGATCCCAAGCCCGCACAACATC...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
3UTR CAA 72 bp GTTCCTCCCCTTGGAGAGCTCTGGGCTGGCAGCATCTaGCTAAGGGGTTGTCAGCCTCCCAACCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: VPPLGELWAGSI*LRGCQPPNLGQ
Trigger: TTGTCCCAGGTTGGGAGGCTGACAACCCCTTAGCAAGATGCTGCCAGCCCAGAGCTCTCCAAGGGGAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCTCTCACGGGTCAGGCTaGACTCGTACTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTSHGSG*TRTGWV
Trigger: CACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGA...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR TCA 90 bp GAAGTTGGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGGGGGAGGGGGTCAGCTaGCTCAGAGAAGTAGGATCT +
Preference number: 4 (lower is better)
Translates to: EVGSGAVCVLRHPHSAKEGEGVS*LREVGS
Trigger: AGATCCTACTTCTCTGAGTCAGCTGACCCCCTCCCC...CTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR TCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTGTGGAGCTGCTGCCCTaGGCCAGATCCAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEAVELLP*ARSRRK
Trigger: CTTCCTCCTGGATCTGGCTCAGGGCAGCAGCTCCAC...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGACTGGATGGGTGAACTaGTGGTATTCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQTGWVN*WYSHGG
Trigger: GCCGCCATGAGAATACCAGCAGTTCACCCATCCAGT...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GGGTGGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTCGTCCTTACTGGATGGGTGAACTaGTGGTATTCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: GWGMARVVECTRVGALVLTGWVN*WYSHGG
Trigger: GCCGCCATGAGAATACCAGCAGTTCACCCATCCAGT...AAGGACGAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR GCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCTCTCACTCCATGGCTTaGCTCAGGCCCCGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTSHSMA*LRPRRS
Trigger: ACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGA...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CCTCCCCTTGGAGAGCTCTGGGCTGGCAGCATCTTGCTAAGGGGTTGTCAGCCTACGCAAAGCCACTTGTaGATTCCAGAGCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPLGELWAGSILLRGCQPTQSHL*IPEPGP
Trigger: TGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGT...AGGCTGACAACCCCTTAGCAAGATGCTGCCAGCCCAGAGCTCTCCAAGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGTGCAGCTACAATCAATaGTCTCTCTGTCCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAECSYNQ*SLCPGV
Trigger: CACCCCGGGACAGAGAGAGCATTGATTGTAGCTGCA...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCCTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSLLVFS*RQSRRR
Trigger: CCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAG...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACGGATGGGTGAACTGCTaGTATTCTCATGGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDGWVNC*YSHGGS
Trigger: ACTGCCGCCATGAGAATACCAGCAGTTCACCCATCC...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp CCTCCACTAGCGCTGCTTTCCTGGTCAAACCTGCATCTTCACTGGGTCATGCCCGACCCCTCCAGTGGCTaGTACCCCACCATCCCACTA +
Preference number: 4 (lower is better)
Translates to: PPLALLSWSNLHLHWVMPDPSSG*YPTIPL
Trigger: TAGTGGGATGGTGGGGTACCAGCCACTGGAGGGGTC...GGGCATGACCCAGTGAAGATGCAGGTTTGACCAGGAAAGCAGCGCTAGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTTGGTGCCCTCACATCTaGGGTCTTCAGGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPWCPHI*GLQAPA
Trigger: GGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCA...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATAACCTGCATCTTCACTaGGTCATGCCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHNLHLH*VMPQGL
Trigger: GAGGCCTTGGGGCATGACCCAGTGAAGATGCAGGTT...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAAGCTCTTGGGAGCTTaGGACAGCCTGAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPKLLGA*DSLRGS
Trigger: AGACCCTCTCAGGCTGTCCCAAGCTCCCAAGAGCTT...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CCTCCCCTTGGAGAGCTCTGGGCTGGCAGCATCTTGCTAAGGGGTTGTCAGCCTCTGACTTGGAGGCTGTaGGTCAGAGCTCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PPLGELWAGSILLRGCQPLTWRL*VRALEA
Trigger: AGCTTCCAGAGCTCTGACCCACAGCCTCCAAGTCAG...AGGCTGACAACCCCTTAGCAAGATGCTGCCAGCCCAGAGCTCTCCAAGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACCCTCCCTTAGAAACTTaGGCCAAACCCTGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDPPLET*AKPCAA
Trigger: AGCTGCACAGGGTTTGGCCCAAGTTTCTAAGGGAGG...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATCTCCCCCAAATTCCCTaGCAAAGCAGGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHLPQIP*QSREAG
Trigger: GCCAGCCTCCCTGCTTTGCCAGGGAATTTGGGGGAG...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTGTCAGCCTCCCAACCTaGGACAAGGACAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPVSLPT*DKDSSS
Trigger: GGAGGAGCTGTCCTTGTCCCAGGTTGGGAGGCTGAC...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAATCCAGTCCAGAAATaGGGGTGCAGAGAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDNPVQK*GCREGL
Trigger: AAGCCCCTCTCTGCACCCCCATTTCTGGACTGGATT...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp AGGGACATCAGGTTGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCCGGACGCCAAAGATGCCTCCTGTaGGTCTGCACAGGACATGTT +
Preference number: 4 (lower is better)
Translates to: RDIRLRRREGCVSQVPGRQRCLL*VCTGHV
Trigger: AACATGTCCTGTGCAGACCCACAGGAGGCATCTTTG...GCGTCCGGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTCCAGTCACAGGGACATaGAATCCGTGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPPVTGT*NPWPGG
Trigger: TCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGG...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR TCA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGGAGCTTGGGACAGCCTaGGAGGGTCTTGTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTELGTA*EGLVLL
Trigger: AAGGAGGACAAGACCCTCTCAGGCTGTCCCAAGCTC...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTAGCAGGGGCTGGCACTaGTGGGCGAGGGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GQLTQRSRISALELEASCSRGWH*WARGGS
Trigger: ACTTCCTCCCCTCGCCCATCAGTGCCAGCCCCTGCT...ACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACACATTTCTCTGGCATTTaGTCTCCCTTCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTHFSGI*SPFPHS
Trigger: GCTGTGGGGGAAGGGAGATCAAATGCCAGAGAAATG...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTGAGCGGTAGGTTTGCGTTGTaGGGCCTGATGCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSPFRSPWPSGGLCGFLSGRFAL*GLMPCS
Trigger: AGAACAGGGCATCAGGCCTCACAACGCAAACCTACC...GCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp AAGACACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTTGAGGTCGCGGCCTGTGGCTaGAAGTCTGCGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTPSQHESCRFREGHQVEVAACG*KSAGSQ
Trigger: CTGGGAGCCCGCAGACTTTCAGCCACAGGCCGCGAC...CTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAGTGCCAAAGAGCACGTaGTTCTTTGTCTCACGGGTC +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTVPKST*FFVSRV
Trigger: GACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCAC...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCGTGCCAAAGAGCACGTaGTTCTTTGTCTCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSVPKST*FFVSRV
Trigger: GACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCAC...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACACCACTACCCCTCACATaGTCTCACTCTCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTPLPLT*SHSPSG
Trigger: ACCTGATGGAGAGTGAGAGCATGTGAGGGGTAGTGG...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp AGGGACATCAGGTTGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCCGGACGCTTGTCCTCAATGAGATaGCATAAGCTGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RDIRLRRREGCVSQVPGRLSSMR*HKLWWH
Trigger: GTGCCACCACAGCTTATGGCATCTCATTGAGGACAA...GCGTCCGGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACATCCCCTAAACATGGCTaGAGAGGGCAACACCATCTC +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTSPKHG*RGQHHL
Trigger: GAGATGGTGTTGCCCTCTGCAGCCATGTTTAGGGGA...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTTCCTGTCTCCTCCATaGGCCCCACCAGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEAFLSPP*APPVTG
Trigger: CCCTGTGACTGGTGGGGCCCATGGAGGAGACAGGAA...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCTCAGGTCCCCAATCCTaGCTTCCCTCTTCACGAACT +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSSGPQS*LPSSRT
Trigger: AGTTCGTGAAGAGGGAAGCCAGGATTGGGGACCTGA...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGGAAGTGTCCGGCTCCTaGGTCTCACTCCATGGCTTG +
Preference number: 4 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTEVSGS*VSLHGL
Trigger: CAAGCCATGGAGTGAGACCCAGGAGCCGGACACTTC...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACAGAGCCAGGGCCATGTaGTTCGGCCCACATGTTGGC +
Preference number: 4 (lower is better)
Translates to: QGRPQILGGALTSGVFRHRARAM*FGPHVG
Trigger: GCCAACATGTGGGCCGAACCACATGGCCCTGGCTCT...GTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTGGATGGGGATGGGGTTaGGGCATGTGTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPGWGWG*GMCTGT
Trigger: GGTTCCTGTACACATGCCCCAACCCCATCCCCATCC...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTGATGGCCCTCTTGCCTaGCCAGGACTCTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPDGPLA*PGLSEG
Trigger: TCCTTCAGAGAGTCCTGGCCAGGCAAGAGGGCCATC...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACACAATGTCCAGCTCTCTaGAGTTCCTGGGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTQCPAL*SSWDCS
Trigger: ACTGCAGTCCCAGGAACTCCAGAGAGCTGGACATTG...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
3UTR CAA 72 bp AGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTaGAGGAGGCGGGAGGGATGTGTGTCACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: STKAADSERDIR*RRREGCVSQVP
Trigger: GGGGACCTGTGACACACATCCCTCCCGCCTCCTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ACAGCTCCTCCTCCTCTGTGTATGGTAACTACAGGGGTGGAAGGCAAGGCAGAGTCTCACGGGTCAGGCTaGACTCGTACTGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: TAPPPLCMVTTGVEGKAESHGSG*TRTGWV
Trigger: CACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGA...CTCTGCCTTGCCTTCCACCCCTGTAGTTACCATACACAGAGGAGGAGGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGTGTTGTATTTGCTGGTaGAGTTGGTTCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: ILGGALTSGVFRHQPCLPCCICW*SWFGSG
Trigger: ACCGCTCCCGAACCAACTTCACCAGCAAATACAACA...CGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR TCA 90 bp AGCTTCCTTAGGCAGGGAGGGATGATGAACCCTCATCCTTTACCTCCTTCTCCAAGCCACGAGGTGTTCTaGGCCAGCAGGCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: SFLRQGGMMNPHPLPPSPSHEVF*ASRLMP
Trigger: GGGCATCAGCCTGCTGGCTCAGAACACCTCGTGGCT...TGGAGAAGGAGGTAAAGGATGAGGGTTCATCATCCCTCCCTGCCTAAGGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTAGCCACGAGGTGTTCTaGGCCAGCAGGCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GQLTQRSRISALELEASCSHEVF*ASRLMP
Trigger: GGGCATCAGCCTGCTGGCTCAGAACACCTCGTGGCT...ACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR TCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTCCAGTCACAGGGACATaGAATCCGTGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEAPVTGT*NPWPGG
Trigger: TCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGG...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR TCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATGGACTCCACCCCACCTaGCTTGGAGGCTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHGLHPT*LGGCGS
Trigger: TGACCCACAGCCTCCAAGTCAGGTGGGGTGGAGTCC...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTGAGCGCCTCTGTGGCTTCTTaGGCTAATCTCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: SSPFRSPWPSGGLCGFLSASVAS*ANLTHC
Trigger: ACAGTGGGTGAGATTAGCTCAAGAAGCCACAGAGGC...GCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTGAGCTTGCGTTGTGAGGCCTaGTGCCCTGTTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSPFRSPWPSGGLCGFLSLRCEA*CPVLLF
Trigger: GAAGAGAAGAACAGGGCATCAGGCCTCACAACGCAA...GCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ACAGCTCCTCCTCCTCTGTGTATGGTAACTACAGGGGTGGAAGGCAAGGCAGAGCTAGTCTCGAACTCCTaGCCTCAAGCGATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TAPPPLCMVTTGVEGKAELVSNS*PQAIRL
Trigger: GAGGCGGATCGCTTGAGGTCAGGAGTTCGAGACTAG...CTCTGCCTTGCCTTCCACCCCTGTAGTTACCATACACAGAGGAGGAGGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCTCCACAAGGCCTGCTaGCTTGACCAGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: LTQRSRISALELEASCLLLHKAC*LDQGGT
Trigger: GGTCCCTCCCTGGTCAAGTCAGCAGGCCTTGTGGAG...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGGGACATGTTTCTCCTTaGGTGTGTTGGGGACATTCC +
Preference number: 4 (lower is better)
Translates to: KMPFLGTALAAQAGLKERGHVSP*VCWGHS
Trigger: GGAATGTCCCCAACACACTCAAGGAGAAACATGTCC...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACTACCCACCCTCCATATaGTGTGTCTACATCTACAGG +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDYPPSI*CVYIYR
Trigger: CCTGTAGATGTAGACACATCATATGGAGGGTGGGTA...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGCACACTTGGCCTCCATaGAGCTGCCACATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTHTWPP*SCHIGP
Trigger: AGGACCAATGTGGCAGCTTCATGGAGGCCAAGTGTG...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGTCGGCATCTGGCTTTTaGATCGAGGACTCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: LTSGVFRHQPCLPRSAVRSASGF*IEDSCL
Trigger: CAAACAAGAGTCCTCGATTCAAAAGCCAGATGCCGA...CCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCTTCAGGCACCAGCCATaGCTGCCGAGGAGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGFRHQP*LPRSAV
Trigger: GACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAA...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGACATCTGGCGATGACTaGTTCATATACGTGAGACAC +
Preference number: 4 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLTSGDD*FIYVRH
Trigger: GTGTCTCACGTATATGAAGCAGTCATCGCCAGATGT...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp GAAGTTGGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGGGATGGGTGAACTGCTaGTATTCTCATGGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: EVGSGAVCVLRHPHSAKEGWVNC*YSHGGS
Trigger: ACTGCCGCCATGAGAATACCAGCAGTTCACCCATCC...CTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp TCCTGTCTCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGAGGCTGAACTCGTACTaGATGGGTGAACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SCLLHGPHQSQGHEIRGLRLNSY*MGELLV
Trigger: TACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCT...CAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGAGACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTGTGGCCGCGTGGACGTaGGTAGATAATCGCATGCAG +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEAVAAWT*VDNRMQ
Trigger: CTGCATGCGATTATCTACCCACGTCCACGCGGCCAC...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCGGTGAGGTGGCCGCGTaGACGTGGGTAGATAATCGC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGGEVAA*TWVDNR
Trigger: GCGATTATCTACCCACGTCCACGCGGCCACCTCACC...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp AGTTGGTTCGGGAGCGGTATGTGTGCTCAGGCACCCCCACAGTGCCAAAGAGCATCAGGTCCCCAATCCTaGCTTCCCTCTTCACGAACT +
Preference number: 4 (lower is better)
Translates to: SWFGSGMCAQAPPQCQRASGPQS*LPSSRT
Trigger: AGTTCGTGAAGAGGGAAGCCAGGATTGGGGACCTGA...TGCTCTTTGGCACTGTGGGGGTGCCTGAGCACACATACCGCTCCCGAACCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp TCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTGAGCGCCACAAATTCTTGGTaGTGCCCTCACATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SSPFRSPWPSGGLCGFLSATNSW*CPHIWG
Trigger: ACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGC...GCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCGCCACAAATTCTTGGTaGTGCCCTCACATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTATNSW*CPHIWG
Trigger: ACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGC...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTTGTGGGTCAGAGCTCTaGAAGCTCTTGGGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPCGSEL*KLLGAW
Trigger: CCAAGCTCCCAAGAGCTTCCAGAGCTCTGACCCACA...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CATAGCTTAGCGCAGATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCCCCCTTGGAGAGCTCTaGGCTGGCAGCATCTTGCTA +
Preference number: 4 (lower is better)
Translates to: HSLAQIHAKPLVHSRARAPLGEL*AGSILL
Trigger: TAGCAAGATGCTGCCAGCCCAGAGCTCTCCAAGGGG...GGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAATCTGCGCTAAGCTATG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATTACAGGAACCAGGGCTaGGGGCCAGCCCTCTATAAT +
Preference number: 4 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHYRNQG*GPALYN
Trigger: ATTATAGAGGGCTGGCCCCCAGCCCTGGTTCCTGTA...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAGCCATCCCCAGTGGATaGCTAGATACCATTCACCAT +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTAIPSG*LDTIHH
Trigger: ATGGTGAATGGTATCTAGCCATCCACTGGGGATGGC...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCACTCGCCATCCCCAGTaGATGGCTAGATACCATTCA +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSTRHPQ*MARYHS
Trigger: TGAATGGTATCTAGCCATCCACTGGGGATGGCGAGT...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR TCA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCCCCTCTATAATTACCTaGGTCACCACAGATACCCCA +
Preference number: 4 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSPSIIT*VTTDTP
Trigger: TGGGGTATCTGTGGTGACTCAGGTAATTATAGAGGG...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTGCTTTATTGCAAACTTaGCAGGTGGCCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPALLQT*QVASTW
Trigger: CCAGGTGGAGGCCACCTGTCAAGTTTGCAATAAAGC...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACTCCTGGATCGGGTTATaGTGGGGGTTAAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDSWIGL*WGLRKT
Trigger: TGTTTTTCTTAACCCCCATCATAACCCGATCCAGGA...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHRLVTF*PRETCK
Trigger: CTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCT...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACAACAAATTCTTGGTGGTaGCCTCACATCTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTTNSWW*PHIWGL
Trigger: AAGACCCCAGATGTGAGGGCACCACCAAGAATTTGT...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATCGAGGCTTCACACAGTaGCGCTCATTTCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHRGFTQ*RSFPSR
Trigger: TCTGGAAGGAAATGAGCGGCACTGTGTGAAGCCTCG...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATAGGCATGAGCCACTGTaGCCATCTCTGGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHRHEPL*PSLGRF
Trigger: AAACCTACCCAGAGATGGGCACAGTGGCTCATGCCT...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACATCACAGCACGAAAGCTaGAGATTCAGAGAGGGACAT +
Preference number: 4 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTSQHES*RFREGH
Trigger: ATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGA...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTTGCCTCCTGTGGGTCTaGACAGGACATGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPCLLWV*TGHVSP
Trigger: AGGAGAAACATGTCCTGTGCAGACCCACAGGAGGCA...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATGTCCTGGATCTGGACTaGGGTCTTCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHVLDLD*GLPLLQ
Trigger: CTGCAGCAGCGGAAGACCCCAGTCCAGATCCAGGAC...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATGTTGCTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: IPEPGPCGSAHMLAVSMLLLVFS*RQSRRR
Trigger: CCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAG...CAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GTGCCAAAGAGCACGTGCTTCTTTGTCTCACGGGTCAGGCTGAACTCGTACTGGAGCACTGTGACGTTCTaGGAGGAGATGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VPKSTCFFVSRVRLNSYWSTVTF*EEMGGE
Trigger: TTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCT...CCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCAACCCTGTGCAGCTCTaGGACTCCACCCCACCTGAC +
Preference number: 4 (lower is better)
Translates to: LTQRSRISALELEASCLLNPVQL*DSTPPD
Trigger: GTCAGGTGGGGTGGAGTCCCAGAGCTGCACAGGGTT...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CATAGCTTAGCGCAGATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCGATGCCTTGAGGACATaGGCATCTCCCACCCTTCGT +
Preference number: 4 (lower is better)
Translates to: HSLAQIHAKPLVHSRARADALRT*ASPTLR
Trigger: ACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATC...GGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAATCTGCGCTAAGCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATGCTGGAGATGCTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGCAGGGAGGCTGGCTTaGGGCTGCCTCTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: MLEMLSSLPHKVGHKFLVAGRLA*GCLSDS
Trigger: AGAGTCAGAGAGGCAGCCCCAAGCCAGCCTCCCTGC...CACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAGCATCTCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 72 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTaGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACC +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKF*VVPSHLGSSGT
Trigger: GGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
3UTR CAA 72 bp ATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTaGGCAGTAAGCATGTTGTTCCAGCCAGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: IPEPGPCGSAHM*AVSMLFQPGES
Trigger: TGACTCACCTGGCTGGAACAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 72 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTaGAGCGGGAATTCCACGGCCCTAGGTATGGACTTA +
Preference number: 4 (lower is better)
Translates to: QKWGCREGLLLL*SGNSTALGMDL
Trigger: TAAGTCCATACCTAGGGCCGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHAGERC*WPGSWF
Trigger: GAACCATGAACCTGGCCATCAGCATCGCTCTCCTGC...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR TCA 90 bp GGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTC +
Preference number: 4 (lower is better)
Translates to: GQLTQRSRISALELEASCAGERC*WPGSWF
Trigger: GAACCATGAACCTGGCCATCAGCATCGCTCTCCTGC...ACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR TCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATTGTTGTATTTGCTGGTaGAGTTGGTTCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHCCICW*SWFGSG
Trigger: ACCGCTCCCGAACCAACTTCACCAGCAAATACAACA...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR TCA 90 bp TCACACTTGACCAGTTTGTCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTCCAGTCACAGGGACATaGAATCCGTGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SHLTSLSLSTVTFWEEMGPVTGT*NPWPGG
Trigger: TCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGG...ACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTCAAGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR TCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATGGGGAGGGGGTCAGCTaGCTCAGAGAAGTAGGATCT +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHGEGVS*LREVGS
Trigger: AGATCCTACTTCTCTGAGTCAGCTGACCCCCTCCCC...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR TCA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATGTGCTAAATATCAGATaGGTCAGCCTCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHVLNIR*VSLWAA
Trigger: AGCTGCCCAGAGGCTGACTCATCTGATATTTAGCAC...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGCATAGTACTAGAGTGTaGCAAAGACCCCATAGGAAG +
Preference number: 4 (lower is better)
Translates to: KMPFLGTALAAQAGLKERHSTRV*QRPHRK
Trigger: CTTCCTATGGGGTCTTTGTCACACTCTAGTACTATG...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCAGGCACCCCCACAGTaGCAAAGAGCACGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTQRSRISALELEASCLLQAPPQ*QRARAS
Trigger: AGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTG...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCGGGGCAGGCAGGCACTaGTGGAGGAGCGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCGAGRH*WRSEGQ
Trigger: CTGGCCTTCGCTCCTCCAGCAGTGCCTGCCTGCCCC...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCTCTTCTCACCAAGATaGCTTTCCTTGGCACGGCGC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGLFSPR*LSLARR
Trigger: GCGCCGTGCCAAGGAAAGGCATCTTGGTGAGAAGAG...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATTGGAGTTCCTGGGACTaGAGTTTTCCAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHWSSWD*SFPAQF
Trigger: AAACTGGGCTGGAAAACTGCAGTCCCAGGAACTCCA...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATTCCAGACGAAGGCTCTaGTCCACTAGGCAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHSRRRL*STRQAV
Trigger: AACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGA...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp ACACTTGACCAGTTTGTCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTGGCTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGG +
Preference number: 4 (lower is better)
Translates to: TLDQFVSEHCDVLGGDGWLLVFS*RQSRRR
Trigger: CCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAG...CCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGACAAACTGGTCAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGAGGCTGAACTCGTACTaGATGGGTGAACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTRLNSY*MGELLV
Trigger: TACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCT...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCGAGATGGGTGGGGAATaGCCAGAGTGGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LTQRSRISALELEASCLLEMGGE*PEWWSA
Trigger: TGCACTCCACCACTCTGGCCATTCCCCACCCATCTC...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp AAGACACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTTGAGGGTGAGGTGGCCGCGTaGACGTGGGTAGATAATCGC +
Preference number: 4 (lower is better)
Translates to: KTPSQHESCRFREGHQVEGEVAA*TWVDNR
Trigger: GCGATTATCTACCCACGTCCACGCGGCCACCTCACC...CTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CCTCCACTAGCGCTGCTTTCCTGGTCAAACCTGCATCTTCACTGGGTCATGCCCCTAGCGCTGCTTTCCTaGTCAAACCTGCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: PPLALLSWSNLHLHWVMPLALLS*SNLHLH
Trigger: GTGAAGATGCAGGTTTGACCAGGAAAGCAGCGCTAG...GGGCATGACCCAGTGAAGATGCAGGTTTGACCAGGAAAGCAGCGCTAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CAGCACCCTTCTAAGAGTGTGGCTGCTAAACTCTTCAGGGACATAGTACTAGAGGGGAAGAGGAAGAGGTaGCGTTCCCCAGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: QHPSKSVAAKLFRDIVLEGKRKR*RSPASP
Trigger: GGGTGAGGCTGGGGAACGCCACCTCTTCCTCTTCCC...CTCTAGTACTATGTCCCTGAAGAGTTTAGCAGCCACACTCTTAGAAGGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTCTCTGGTGGCCTCTGTaGCTTCTTGAGCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPLWWPL*LLELIS
Trigger: TGAGATTAGCTCAAGAAGCCACAGAGGCCACCAGAG...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCTCCGTGGCCCTCTGGTaGCCTCTGTGGCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGSVALW*PLWLLE
Trigger: CTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGA...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp ATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCAATGAAGCTGCCACATTaGTCCTACCCACCCTCCATA +
Preference number: 4 (lower is better)
Translates to: IHAKPLVHSRARAMWFGPMKLPH*SYPPSI
Trigger: TATGGAGGGTGGGTAGGACCAATGTGGCAGCTTCAT...TGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 72 bp CTCCTGCCGATGCTTTTGGATTTAGGAAGTGATGCCTaGAGGACATGGGCATCTCCCACCCTTCGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LLPMLLDLGSDA*RTWASPTLRAH
Trigger: GTGAGCACGAAGGGTGGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTGTTGTATTTGCTGGTaGAGTTGGTTCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEACCICW*SWFGSG
Trigger: ACCGCTCCCGAACCAACTTCACCAGCAAATACAACA...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR TCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCAGCCACGAGGTGTTCTaGGCCAGCAGGCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTSHEVF*ASRLMP
Trigger: GGGCATCAGCCTGCTGGCTCAGAACACCTCGTGGCT...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp GGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTTGCCCTCGGGAGACCTaGAAGACTGTTAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GQLTQRSRISALELEASCCPRET*KTVSRR
Trigger: TCTCCTGCTAACAGTCTTGCAGGTCTCCCGAGGGCA...ACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR GCA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTTCTAGATGTCAGAGATaGAGACATTGCGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPSRCQR*RHCASQ
Trigger: CTGAGACGCGCAATGTCTGCATCTCTGACATCTAGA...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GAGGACCTTCATGTTGTATTTGCTGGTGAAGTTGGTTCGGGAGCGGTATGTGTGTCCAGACGAAGGCTCTaGTCCACTAGGCAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: EDLHVVFAGEVGSGAVCVSRRRL*STRQAV
Trigger: AACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGA...CACACATACCGCTCCCGAACCAACTTCACCAGCAAATACAACATGAAGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCAGATGCCATAAGCTGTaGTGGCACTATACACAGTCA +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTRCHKL*WHYTQS
Trigger: TGACTGTGTATAGTGCCACCACAGCTTATGGCATCT...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACCAGATTCCAGAGGCTTaGTTTTATTGTGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDQIPEA*FYCAVF
Trigger: GAAAACTGCACAATAAAACCAAGCCTCTGGAATCTG...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp AGCTTCCTTAGGCAGGGAGGGATGATGAACCCTCATCCTTTACCTCCTTCTCCAGACTCTGACAGCAGTTaGAACCCACAGCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLRQGGMMNPHPLPPSPDSDSS*NPQLPC
Trigger: GCAGGGTAGCTGTGGGTTCCAACTGCTGTCAGAGTC...TGGAGAAGGAGGTAAAGGATGAGGGTTCATCATCCCTCCCTGCCTAAGGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CAGAAATGGGGGTGCAGAGAGGGGCTTCTGTTGCTCTTGAGCGGGAATTCCACGAAGAGTGGGAGCCGGTaGCATAATTTAGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: QKWGCREGLLLLLSGNSTKSGSR*HNLDLR
Trigger: CCTCAGATCTAAATTATGCCACCGGCTCCCACTCTT...CGTGGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCTGCACCCCCATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp AAGACACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTTGAGCAAGATGCCTTTCCTTaGCACGGCGCTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KTPSQHESCRFREGHQVEQDAFP*HGACSP
Trigger: TGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTTG...CTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CATAGCTTAGCGCAGATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCCACCCCACATTTCTCTaGCATTTGATCTCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HSLAQIHAKPLVHSRARAHPTFL*HLISLP
Trigger: GGGAAGGGAGATCAAATGCCAGAGAAATGTGGGGTG...GGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAATCTGCGCTAAGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CAGCACCCTTCTAAGAGTGTGGCTGCTAAACTCTTCAGGGACATAGTACTAGAGCCTTTCCGAAGTCCGTaGCCCTCTGGTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: QHPSKSVAAKLFRDIVLEPFRSP*PSGGLC
Trigger: ACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGG...CTCTAGTACTATGTCCCTGAAGAGTTTAGCAGCCACACTCTTAGAAGGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 72 bp TGCAGAGCCACACTTGGCCTCCATGAAGCTGCCACATaGGTCCTACCCACCCTCCATATGATGTGTCTACAT +
Preference number: 4 (lower is better)
Translates to: CRATLGLHEAAT*VLPTLHMMCLH
Trigger: ATGTAGACACATCATATGGAGGGTGGGTAGGACCAATGTGGCAGCTTCATGGAGGCCAAGTGTGGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTGTGCCAAAGAGCACGTaGTTCTTTGTCTCACGGGTC +
Preference number: 4 (lower is better)
Translates to: GQLTQRSRISALELEASCVPKST*FFVSRV
Trigger: GACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCAC...ACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp GGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGCAGGCACCCCCACAGTaGCAAAGAGCACGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GQYLSPVLSPADAFGFRKQAPPQ*QRARAS
Trigger: AGAAGCACGTGCTCTTTGGCACTGTGGGGGTGCCTG...CTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGGGCTTGGTTTTATTGTaGAGTTTTCTTTGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQGLVLL*SFLCPQ
Trigger: TTGAGGACAAAGAAAACTGCACAATAAAACCAAGCC...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCAGAGATGCAGACATTaGGCGTCTCAGTGGACAATC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGQRCRH*ASQWTI
Trigger: GATTGTCCACTGAGACGCGCAATGTCTGCATCTCTG...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATGAGCGGCTGGGGAGGTaGAGTCTGTATTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHERLGR*SLYSFP
Trigger: AGGAAATGAATACAGACTGCACCTCCCCAGCCGCTC...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTATGTGAGCCAAGGATaGTTCCCAATGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEAYVSQG*FPMSSS
Trigger: AGAGCTGGACATTGGGAAGCATCCTTGGCTCACATA...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCGGATGGGTGAACTGCTaGTATTCTCATGGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTQRSRISALELEASCLLGWVNC*YSHGGS
Trigger: ACTGCCGCCATGAGAATACCAGCAGTTCACCCATCC...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp ATGCTGGAGATGCTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGAGCACTGTGACGTTCTaGGAGGAGATGGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: MLEMLSSLPHKVGHKFLVSTVTF*EEMGGE
Trigger: TTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCT...CACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAGCATCTCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCTCAGGTCCCCAATCCTaGCTTCCCTCTTCACGAACT +
Preference number: 4 (lower is better)
Translates to: LTQRSRISALELEASCLLSGPQS*LPSSRT
Trigger: AGTTCGTGAAGAGGGAAGCCAGGATTGGGGACCTGA...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCTCTCTCCCAGGTTTCTaGTCCCGATGGGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGSLPGF*SRWARM
Trigger: CATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGA...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGTGAGTCAGCAGACATaGGATGTTCGTTTATTTGGG +
Preference number: 4 (lower is better)
Translates to: GHKFLVVPSHLGSSGTSHVSQQT*DVRLFG
Trigger: CCCAAATAAACGAACATCCCATGTCTGCTGACTCAC...ATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACACCCTTCTAAGAGTGTaGCTGCTAAACTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QGRPQILGGALTSGVFRHTLLRV*LLNSSG
Trigger: CCCTGAAGAGTTTAGCAGCCACACTCTTAGAAGGGT...GTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCTTTGGATTTAGGAAGTaGTGCCTTGAGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGFGFRK*CLEDMG
Trigger: GCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAA...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CGTTTATTTGGGCAAATGTGTCTCGTTAGGGTCATTCTGAAAAGAAGCCCAGTGGGCTTCTGTTGCTCTTaGGCGGGAATTCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: RLFGQMCLVRVILKRSPVGFCCS*AGIPRP
Trigger: GGGCCGTGGAATTCCCGCTCAAGAGCAACAGAAGCC...CACTGGGCTTCTTTTCAGAATGACCCTAACGAGACACATTTGCCCAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCTTTTGCAGCCTTGGCTaGACCAACCCTTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTFCSLG*TNPWRG
Trigger: GCCTCGCCAAGGGTTGGTTCAGCCAAGGCTGCAAAA...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR TCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCATCTCCGATTGTATGTaGGCCAAGGATGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGISDCM*AKDASQ
Trigger: TTGGGAAGCATCCTTGGCTCACATACAATCGGAGAT...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp CGTTTATTTGGGCAAATGTGTCTCGTTAGGGTCATTCTGAAAAGAAGCCCAGTGTTGGGCCAAACCCTGTaGAGCTCTGGGACTCCACCC +
Preference number: 4 (lower is better)
Translates to: RLFGQMCLVRVILKRSPVLGQTL*SSGTPP
Trigger: GGGTGGAGTCCCAGAGCTGCACAGGGTTTGGCCCAA...CACTGGGCTTCTTTTCAGAATGACCCTAACGAGACACATTTGCCCAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATAGGAAACTGCTTTATTaGAAACTTGACAGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHRKLLY*KLDRWP
Trigger: AGGCCACCTGTCAAGTTTGCAATAAAGCAGTTTCCT...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCGGATCCCGCGGCGGCTaGAGCTACAATCAATGCTCT +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTGSRGG*SYNQCS
Trigger: AGAGCATTGATTGTAGCTGCAGCCGCCGCGGGATCC...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCATGAAATCCGTGGCCTaGAGGAGGGAGAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTMKSVA*RRERES
Trigger: GCTCTCCCTCTCCCTCCTCCAGGCCACGGATTTCAT...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCTGCCATAAGCTGTGGTaGCACTATACACAGTCACAG +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGCHKLW*HYTQSQ
Trigger: CTGTGACTGTGTATAGTGCCACCACAGCTTATGGCA...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCGGAGCGAAGGCCAGGTaGACACGAGGACAGATTCCA +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTGAKAR*TRGQIP
Trigger: TGGAATCTGTCCTCGTGTCCACCTGGCCTTCGCTCC...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 72 bp TTCTCACCAAATTCAGGAAACTGCTTTATTGCAAACTaGACAGGTGGCCTCCACCTGGCCACGCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: FSPNSGNCFIAN*TGGLHLATPLP
Trigger: TGGCAGTGGCGTGGCCAGGTGGAGGCCACCTGTCAAGTTTGCAATAAAGCAGTTTCCTGAATTTGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATGTTGTTTCTTTGTCCTCAATaGGATGCCATAAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: IPEPGPCGSAHMLAVSMLFLCPQ*DAISCG
Trigger: ACCACAGCTTATGGCATCTCATTGAGGACAAAGAAA...CAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATACCAACATCTGGCGATaGCTGCTTCATATACGTGAG +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHTNIWR*LLHIRE
Trigger: CTCACGTATATGAAGCAGTCATCGCCAGATGTTGGT...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR GCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATACAAATTCTTGGTGGTaGCCTCACATCTGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHTNSWW*PHIWGL
Trigger: AAGACCCCAGATGTGAGGGCACCACCAAGAATTTGT...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp ATGCTGGAGATGCTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGAGGCTGAACTCGTACTaGATGGGTGAACTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: MLEMLSSLPHKVGHKFLVRLNSY*MGELLV
Trigger: TACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCT...CACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAGCATCTCCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCAGACAGAAGCAGCTCTaGAACAAAAAGTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTRQKQL*NKKYKK
Trigger: CTTTTTGTACTTTTTGTTCCAGAGCTGCTTCTGTCT...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCTCTCTCCCAGGTTTCTaGTCCCGATGGGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTSLPGF*SRWARM
Trigger: CATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGA...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCGGGAGTGGATGGGGATaGGGTTGGGGCATGTGTACA +
Preference number: 4 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCGSGWG*GWGMCT
Trigger: TGTACACATGCCCCAACCCCATCCCCATCCACTCCC...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR TCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCTCGTTAGGGTCATTCTaGAAAGAAGCCCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGSLGSF*KEAQCA
Trigger: TGCACACTGGGCTTCTTTTCAGAATGACCCTAACGA...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCACTGGATGGGTGAACTaGTGGTATTCTCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTTGWVN*WYSHGG
Trigger: GCCGCCATGAGAATACCAGCAGTTCACCCATCCAGT...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR GCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCATCTTCACTGGGTCATaGCCCAAGGCCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCIFTGS*PKASEG
Trigger: TCCCTCAGAGGCCTTGGGGCATGACCCAGTGAAGAT...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCTTTCCTGGTCAAACCTaGATCTTCACTGGGTCATGC +
Preference number: 4 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGFPGQT*IFTGSC
Trigger: GCATGACCCAGTGAAGATGCAGGTTTGACCAGGAAA...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATAGACAGAAGCAGCTCTaGAACAAAAAGTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: VHSRARAMWFGPHVGSKHRQKQL*NKKYKK
Trigger: CTTTTTGTACTTTTTGTTCCAGAGCTGCTTCTGTCT...ATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAATGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp CCCAATCCTGGCTTCCCTCTTCACGAACTCTCAAAGAAAAGGAAGGATAAAACCGCAGTCATTAGCCCCTaGGGTAGCGTTGCTACTAAG +
Preference number: 4 (lower is better)
Translates to: PNPGFPLHELSKKRKDKTAVISP*GSVATK
Trigger: CTTAGTAGCAACGCTACCCCAGGGGCTAATGACTGC...GGTTTTATCCTTCCTTTTCTTTGAGAGTTCGTGAAGAGGGAAGCCAGGATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGACAGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTTGGATTTAGGAAGTCCCAGTCCTCAGCATaGTCATTCCGGGTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: GQYLSPVLSPADAFGFRKSQSSA*SFRVGL
Trigger: TAAACCTACCCGGAATGACCATGCTGAGGACTGGGA...CTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
3UTR CAA 72 bp AGTATTTGTCCCCAGTCCTTTCTCCTGCCGATGCTTTaGGATTTAGGAAGTGATGCCTTGAGGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: SICPQSFLLPML*DLGSDALRTWA
Trigger: TGCCCATGTCCTCAAGGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAGAAAGGACTGGGGACAAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CCA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTAGACAGAAGCAGCTCTaGAACAAAAAGTACAAAAAG +
Preference number: 4 (lower is better)
Translates to: GGGQLTQRSRISALELEARQKQL*NKKYKK
Trigger: CTTTTTGTACTTTTTGTTCCAGAGCTGCTTCTGTCT...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CCA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCGCATCTATTCCTATCTaGATAGGACACAAGCTAATC +
Preference number: 4 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGASIPI*IGHKLI
Trigger: GATTAGCTTGTGTCCTATCCAGATAGGAATAGATGC...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CCA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCCATTGCGCGTCTCAGTaGACAATCCAGTCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCHCASQ*TIQSRN
Trigger: ATTTCTGGACTGGATTGTCCACTGAGACGCGCAATG...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR GCA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCCAAATTCAGGAAACTaGTTTATTGCAAACTTGACA +
Preference number: 4 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHPNSGN*FIANLT
Trigger: TGTCAAGTTTGCAATAAAGCAGTTTCCTGAATTTGG...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS GCA 90 bp CCCGCGAGAGCGCGCAGGGCATTGCCTCGGTTGAGTGCGCCCGGGTaGGCAGGGCGCACCACTAGACGAGTTCAGGGTCCCTGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: PARARRALPRLSAPG*AGRTTRRVQGPWRS
Trigger: TGAGCGCCAGGGACCCTGAACTCGTCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp AGAAGGGGCGTGCACCCGCGAGAGCGCGCAGGGCATTGCCTCGGTTaGGTGCGCCCGGGTGCGCAGGGCGCACCACTAGACGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RRGVHPRERAGHCLG*VRPGAQGAPLDEFR
Trigger: CCTGAACTCGTCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACGCCCCTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 90 bp TATCTGCAGAGCAGTGCTCGCCCAGGAGAGGCCACAGAAGGGGCGTaGACCCGCGAGAGCGCGCAGGGCATTGCCTCGGTTGAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: YLQSSARPGEATEGA*TRESAQGIASVECA
Trigger: GGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACGCCCCTTCTGTGGCCTCTCCTGGGCGAGCACTGCTCTGCAGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp GGGCGCACCACTAGACGAGTTCAGGGTCCCTGGCGCTCAGCCCCTTaGCGGGTGAGGCTAGGATCCCGCGGCGGCTGCAGCTACAATCAA +
Preference number: 5 (lower is better)
Translates to: GRTTRRVQGPWRSAP*RVRLGSRGGCSYNQ
Trigger: TTGATTGTAGCTGCAGCCGCCGCGGGATCCTAGCCTCACCCGTCAAGGGGCTGAGCGCCAGGGACCCTGAACTCGTCTAGTGGTGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 90 bp CTGCAAGACTGGCACCAGCAGTGCCTCCTTCAAACTGGAGGGGCCTaGGGCACAGGGGCCTCCCACCCACCTGAAGTGGAGAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: LQDWHQQCLLQTGGA*GTGASHPPEVERWA
Trigger: GGCCCATCTCTCCACTTCAGGTGGGTGGGAGGCCCCTGTGCCGCAGGCCCCTCCAGTTTGAAGGAGGCACTGCTGGTGCCAGTCTTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS GCA 90 bp CTGCAAGACTGGCACCAGCAGTGCCTCCTTCAAACTGGAGGGGCCTaGGGCACAGGGGCCTCCCACCCACCTGTTAGCAGGAGAGCGATG +
Preference number: 5 (lower is better)
Translates to: LQDWHQQCLLQTGGA*GTGASHPPVSRRAM
Trigger: CATCGCTCTCCTGCTAACAGGTGGGTGGGAGGCCCCTGTGCCGCAGGCCCCTCCAGTTTGAAGGAGGCACTGCTGGTGCCAGTCTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532974.1
CDS-3UTR CAA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGGGGGTGTTCCTCCCCTaGGAGAGCTCTGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQGVFLP*ESSGLA
Trigger: TGCCAGCCCAGAGCTCTCCAAGGGGAGGAACACCCC...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGCCAAGATGCCTTTCCTaGGCACGGCGCTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLPRCLS*ARRLQP
Trigger: GGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTTGG...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS GCA 90 bp CGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAGACTGGACTGGGGTCTTCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: RRLWSTRQAVRLVTF*PRETCKTGLGSSAA
Trigger: AGCAGCGGAAGACCCCAGTCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527590.5
CDS GCA 90 bp CGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAGACTGGCACCAGCAGTGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRLWSTRQAVRLVTF*PRETCKTGTSSASF
Trigger: GAAGGAGGCACTGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532974.1
ENST00000584021.1
CDS CCA 90 bp GGCAGTCCAGACGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGGAGACCTGCAAGACTGGACTGGGGT +
Preference number: 5 (lower is better)
Translates to: GSPDEGSGPLGRPLG*SPSALGRPARLDWG
Trigger: ACCCCAGTCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527590.5
CDS CCA 90 bp GGCAGTCCAGACGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGGAGACCTGCAAGACTGGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: GSPDEGSGPLGRPLG*SPSALGRPARLAPA
Trigger: TGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532974.1
ENST00000584021.1
CDS GCA 90 bp ACTAGGCAGGCCGTTAGGCTGGTCACCTTCTGCCCTCGGGAGACCTaGAAGACTGGCACCAGCAGTGCCTCCTTCAAACTGGAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: TRQAVRLVTFCPRET*KTGTSSASFKLEGP
Trigger: AGGCCCCTCCAGTTTGAAGGAGGCACTGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532974.1
ENST00000584021.1
CDS CCA 90 bp GGCAGTCCAGACGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGGAGACCTGTTAGCAGGAGAGCGATG +
Preference number: 5 (lower is better)
Translates to: GSPDEGSGPLGRPLG*SPSALGRPVSRRAM
Trigger: CATCGCTCTCCTGCTAACAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CAA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGGAGAGGGACATCAGGTaGAGGAGGCGGGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQERDIR*RRREGC
Trigger: ACATCCCTCCCGCCTCCTCAACCTGATGTCCCTCTC...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS GCA 90 bp CGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAGACTGTTAGCAGGAGAGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: RRLWSTRQAVRLVTF*PRETCKTVSRRAML
Trigger: CAGCATCGCTCTCCTGCTAACAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000528522.5
CDS CCA 90 bp GGCAGTCCAGACGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGGAGACCTGCAAGACTGTTAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GSPDEGSGPLGRPLG*SPSALGRPARLLAG
Trigger: TCCTGCTAACAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000528522.5
CDS CCA 90 bp GGTGAACTGCTGGTATTCTCATGGCGGCAGTCCAGACGAAGGCTCTaGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GELLVFSWRQSRRRL*STRQAVRLVTFCPR
Trigger: CCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000584021.1
CDS CCA 90 bp GGGGTGGAGAGCGGCTGGGGAGGTGCAGTCTGTATTCATTTCCTCTaGTCTGTGTCCTCAGGCGGCTCCAGACCCAGAGAAGGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: GVESGWGGAVCIHFL*SVSSGGSRPREGLL
Trigger: GAGCAGACCTTCTCTGGGTCTGGAGCCGCCTGAGGACACAGACCAGAGGAAATGAATACAGACTGCACCTCCCCAGCCGCTCTCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CAA 90 bp TTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGAGCTCTGGAAGCTCTaGGGAGCTTGGGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: FLVVPSHLGSSGTSHACRELWKL*GAWDSL
Trigger: CAGGCTGTCCCAAGCTCCCAAGAGCTTCCAGAGCTC...TCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACAGGGCATTGCCTCGGTaGAGTGCGCCCGGGTGCGCA +
Preference number: 5 (lower is better)
Translates to: QGRPQILGGALTSGVFRHRALPR*SAPGCA
Trigger: TGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCT...GTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CAA 90 bp GGAGGGGGTCAGCTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTAGAGCGCGCAGGGCATaGCCTCGGTTGAGTGCGCCC +
Preference number: 5 (lower is better)
Translates to: GGGQLTQRSRISALELEARARRA*PRLSAP
Trigger: GGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCT...AGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAGCTGACCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp CCAGTCCTGCCCCATGCCGGGTACCTGTTAGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTCTGGGATCTCAGTCCTGGATCTGGG +
Preference number: 5 (lower is better)
Translates to: PVLPHAGYLLAGERC*WPGSWFWDLSPGSG
Trigger: CCCAGATCCAGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCATCGCTCTCCTGCTAACAGGTACCCGGCATGGGGCAGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 90 bp AAATCCGTGGCCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTaGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: KSVASEHCDVLGGDG*GMARVVECTRVGAL
Trigger: GAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGGCCACGGATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524970.5
CDS CCA 90 bp GCTTGTCTCACCTCTGAGCACTGTGACGTTCTGGGAGGAGATGGGTaGGGAATGGCCAGAGTGGTGGAGTGCACACGTGTAGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ACLTSEHCDVLGGDG*GMARVVECTRVGAL
Trigger: GAGGGCACCTACACGTGTGCACTCCACCACTCTGGCCATTCCCCACCCATCTCCTCCCAGAACGTCACAGTGCTCAGAGGTGAGACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 90 bp CAGGCAGGCACAGGCCCAAAGCAAGGGTGTACTCCCTTTGGGAGGTaGGTACTGCAATGTCTTAGCTGGGACCAGGAACAGCCCGGTCTC +
Preference number: 5 (lower is better)
Translates to: QAGTGPKQGCTPFGR*VLQCLSWDQEQPGL
Trigger: GAGACCGGGCTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGTACACCCTTGCTTTGGGCCTGTGCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS-3UTR CAA 90 bp CTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGTCTCTGCACTGGAACTaGAGGCTTCCTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LTSGVFRHQPCLPRSAVRSLHWN*RLPVSS
Trigger: GGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGA...CCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CAA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTGTCTCACTCCATGGCTaGCCTCAGGCCCCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPVSLHG*PQAPQK
Trigger: CTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGAC...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS TCA 90 bp CCAGTCCTGCCCCATGCCGGGTACCTGTTAGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTCTGGGATCTCAGTCCTGGATCTGGA +
Preference number: 5 (lower is better)
Translates to: PVLPHAGYLLAGERC*WPGSWFWDLSPGSG
Trigger: TCCAGATCCAGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCATCGCTCTCCTGCTAACAGGTACCCGGCATGGGGCAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533840.1
CDS-3UTR CAA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGCTGATGCCCTCACACTaGACCAGTTTGTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAELMPSH*TSLSLS
Trigger: GCTCAGAGACAAACTGGTCAAGTGTGAGGGCATCAG...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CAA 90 bp TCCTCCATGGGCCCCACCAGTCACAGGGACATGAAATCCGTGGCCTGGAGGAGGCTGATGCCCTCACACTaGACCAGTTTGTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SSMGPTSHRDMKSVAWRRLMPSH*TSLSLS
Trigger: GCTCAGAGACAAACTGGTCAAGTGTGAGGGCATCAG...CCTCCTCCAGGCCACGGATTTCATGTCCCTGTGACTGGTGGGGCCCATGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CAA 90 bp TCTTCTCCTTTCCGAAGTCCGTGGCCCTCTGGTGGCCTCTGTGGCTTCTTGAGCCAGCCTGAGAGGGTCTaGTCCTCCTTTGTAGCCCTC +
Preference number: 5 (lower is better)
Translates to: SSPFRSPWPSGGLCGFLSQPERV*SSFVAL
Trigger: GAGGGCTACAAAGGAGGACAAGACCCTCTCAGGCTG...GCTCAAGAAGCCACAGAGGCCACCAGAGGGCCACGGACTTCGGAAAGGAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCTTCACGCAAAGCCACTaGTGCATTCCAGAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSFTQSH*CIPEPG
Trigger: CCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAA...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp TGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGCTCCTGCCGATGCTTTaGGATTTAGGAAGTGATGCC +
Preference number: 5 (lower is better)
Translates to: WWCPHIWGLQAPAMPAEELLPML*DLGSDA
Trigger: GGCATCACTTCCTAAATCCAAAAGCATCGGCAGGAG...CTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACACAAGGCCTGCTGACTaGACCAGGGAGGGACCCACG +
Preference number: 5 (lower is better)
Translates to: QGRPQILGGALTSGVFRHTRPAD*TREGPT
Trigger: CGTGGGTCCCTCCCTGGTCAAGTCAGCAGGCCTTGT...GTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATTGGCTGAACCAACCCTaGGCGAGGCGACGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: LSSLPHKVGHKFLVVPSHWLNQP*ARRRGA
Trigger: GGCTCCGCGTCGCCTCGCCAAGGGTTGGTTCAGCCA...ATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 90 bp GCACAGGCCCAAAGCAAGGGTGTACTCCCTTTGGGAGGTGGGTACTaGAATGTCTTAGCTGGGACCAGGAACAGCCCGGTCTCACAGAAC +
Preference number: 5 (lower is better)
Translates to: AQAQSKGVLPLGGGY*NVLAGTRNSPVSQN
Trigger: GTTCTGTGAGACCGGGCTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGTACACCCTTGCTTTGGGCCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 90 bp GTCAGGCTGAACTCGTACTGGATGGGTGAACTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGGCTCTGGTCCACTAGGCAGGCCGTT +
Preference number: 5 (lower is better)
Translates to: VRLNSYWMGELLVFS*RQSRRRLWSTRQAV
Trigger: AACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000584021.1
CDS-3UTR CAA 90 bp CTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGTATTTGCTGGTGAAGTaGGTTCGGGAGCGGTATGTG +
Preference number: 5 (lower is better)
Translates to: LTSGVFRHQPCLPRSAVRYLLVK*VRERYV
Trigger: CACATACCGCTCCCGAACCAACTTCACCAGCAAATA...CCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CAA 90 bp GTCAGGACAGACCATGTCCGTGCTAGGCCCAGGCACAGCCCAACCACTCCTCATCTGATGCCCTCACACTaGACCAGTTTGTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: VRTDHVRARPRHSPTTPHLMPSH*TSLSLS
Trigger: GCTCAGAGACAAACTGGTCAAGTGTGAGGGCATCAG...ATGAGGAGTGGTTGGGCTGTGCCTGGGCCTAGCACGGACATGGTCTGTCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CAA 90 bp AAGATGCCTTTCCTTGGCACGGCGCTTGCAGCCCAAGCAGGGCTGAAGGAGAGGGTAGGCCACAAATTCTaGGTGGTGCCCTCACATCTG +
Preference number: 5 (lower is better)
Translates to: KMPFLGTALAAQAGLKERVGHKF*VVPSHL
Trigger: CAGATGTGAGGGCACCACCAAGAATTTGTGGCCTAC...CCTCTCCTTCAGCCCTGCTTGGGCTGCAAGCGCCGTGCCAAGGAAAGGCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CCTCCACTAGCGCTGCTTTCCTGGTCAAACCTGCATCTTCACTGGGTCATGCCCGCCTCCCTTAGAAACTaGGGCCAAACCCTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PPLALLSWSNLHLHWVMPASLRN*GQTLCS
Trigger: GCTGCACAGGGTTTGGCCCAAGTTTCTAAGGGAGGC...GGGCATGACCCAGTGAAGATGCAGGTTTGACCAGGAAAGCAGCGCTAGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CATAGCTTAGCGCAGATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCGGGCTTCTGTTGCTCTaGAGCGGGAATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: HSLAQIHAKPLVHSRARAGLLLL*SGNSTA
Trigger: GGCCGTGGAATTCCCGCTCAAGAGCAACAGAAGCCC...GGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAATCTGCGCTAAGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACTCAGAGATGCAGACATaGCGCGTCTCAGTGGACAAT +
Preference number: 5 (lower is better)
Translates to: HIWGLQAPAMPAEECCQDSEMQT*RVSVDN
Trigger: ATTGTCCACTGAGACGCGCAATGTCTGCATCTCTGA...GTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp GTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGGTCGGCATCTGGCTTTaGAATCGAGGACTCTTGTTT +
Preference number: 5 (lower is better)
Translates to: VPSHLGSSGTSHACRGVLVGIWL*NRGLLF
Trigger: AAACAAGAGTCCTCGATTCAAAAGCCAGATGCCGAC...CAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CAA 90 bp CTGACTCAGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCTGGCGCTCAGCCCCTaGACGGGTGAGGCTAGGATC +
Preference number: 5 (lower is better)
Translates to: LTQRSRISALELEASCLLLALSP*TGEARI
Trigger: GATCCTAGCCTCACCCGTCAAGGGGCTGAGCGCCAG...GAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCTGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp GAAGGCAATGGTTCCCCAGTTGACCAGGCAGCAGTTGGGAGAGGGTaGGAGCGTTATGGGGCTATTCTCCTCTCTAGTCCAGCCAAGGGA +
Preference number: 5 (lower is better)
Translates to: EGNGSPVDQAAVGRG*ERYGAILLSSPAKG
Trigger: TCCCTTGGCTGGACTAGAGAGGAGAATAGCCCCATAACGCTCTCACCCTCTCCCAACTGCTGCCTGGTCAACTGGGGAACCATTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 90 bp ACAGGATGGGAATCAGCCAAGCTGTGCCACACTTACCACCAGGGCTaGGGGTCCCTGGGAACATGGCATAGTGGCTATGGCAGTCATCTA +
Preference number: 5 (lower is better)
Translates to: TGWESAKLCHTYHQG*GSLGTWHSGYGSHL
Trigger: TAGATGACTGCCATAGCCACTATGCCATGTTCCCAGGGACCCCCAGCCCTGGTGGTAAGTGTGGCACAGCTTGGCTGATTCCCATCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 90 bp GATGGCCAGGTTCATGGTTCTGGGATCTCAGTCCTGGATCTGGGGTaGGAACAGGATGGGAATCAGCCAAGCTGTGCCACACTTACCACC +
Preference number: 5 (lower is better)
Translates to: DGQVHGSGISVLDLG*EQDGNQPSCATLTT
Trigger: GGTGGTAAGTGTGGCACAGCTTGGCTGATTCCCATCCTGTTCCCACCCCAGATCCAGGACTGAGATCCCAGAACCATGAACCTGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 90 bp CAAGGGTGTACTCCCTTTGGGAGGTGGGTACTGCAATGTCTTAGCTaGGACCAGGAACAGCCCGGTCTCACAGAACCAGCCATCTTTCCC +
Preference number: 5 (lower is better)
Translates to: QGCTPFGRWVLQCLS*DQEQPGLTEPAIFP
Trigger: GGGAAAGATGGCTGGTTCTGTGAGACCGGGCTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGTACACCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS-3UTR CAA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCTATTTGCTGGTGAAGTaGGTTCGGGAGCGGTATGTG +
Preference number: 5 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSYLLVK*VRERYV
Trigger: CACATACCGCTCCCGAACCAACTTCACCAGCAAATA...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CAA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCTTGGCAGTAAGCATGTaGTTCCAGCCAGGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSLAVSM*FQPGES
Trigger: TGACTCACCTGGCTGGAACAACATGCTTACTGCCAA...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp GTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCCCCACCCCGAAGGGACAGTATTaGTCCCCAGTCCTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VGSLHWNLRLPVSSMGPTPKGQY*SPVLSP
Trigger: AGGAGAAAGGACTGGGGACAAATACTGTCCCTTCGG...GGTGGGGCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp ACAGCTCCTCCTCCTCTGTGTATGGTAACTACAGGGGTGGAAGGCAAGGCAGAGTGGGCTGGCAGCATCTaGCTAAGGGGTTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TAPPPLCMVTTGVEGKAEWAGSI*LRGCQP
Trigger: AGGCTGACAACCCCTTAGCAAGATGCTGCCAGCCCA...CTCTGCCTTGCCTTCCACCCCTGTAGTTACCATACACAGAGGAGGAGGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CAAGGTAGGCCACAAATTCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACAGATGTTGTGCGGGCTaGGGATCTAGGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: QGRPQILGGALTSGVFRHRCCAG*GSRRGR
Trigger: CCTTCCCCTCCTAGATCCCAAGCCCGCACAACATCT...GTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGAATTTGTGGCCTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS-3UTR CAA 90 bp TCTTGGTGGTGCCCTCACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGCATAGTGATCTCCGATaGTATGTGAGCCAAGGATGC +
Preference number: 5 (lower is better)
Translates to: SWWCPHIWGLQAPAMPAEHSDLR*YVSQGC
Trigger: GCATCCTTGGCTCACATACAATCGGAGATCACTATG...CTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGTGAGGGCACCACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp GTGCTTCTTTGTCTCACGGGTCAGGCTGAACTCGTACTGGATGGGTaGACTGCTGGTATTCTCATGGCGGCAGTCCAGACGAAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VLLCLTGQAELVLDG*TAGILMAAVQTKAL
Trigger: CAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000580275.5
ENST00000584021.1
CDS TCA 90 bp CCACAGTGCCAAAGAGCACGTGCTTCTTTGTCTCACGGGTCAGGCTaGACTCGTACTGGATGGGTGAACTGCTGGTATTCTCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: PQCQRARASLSHGSG*TRTGWVNCWYSHGG
Trigger: GCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTGGCACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000580275.5
ENST00000584021.1
CDS CCA 90 bp GTCAGGCTGAACTCGTACTGGATGGGTGAACTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGGCTCTGGTCCACTGTTAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: VRLNSYWMGELLVFS*RQSRRRLWSTVSRR
Trigger: TCTCCTGCTAACAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580275.5
CDS-3UTR CAA 90 bp TCCTCATCCAAGTCTCTCCCAGGTTTCTGGTCCCGATGGGCAAGGATGACCCCTTTAGGAAGTGATGCCTaGAGGACATGGGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: SSSKSLPGFWSRWARMTPLGSDA*RTWASP
Trigger: GGGAGATGCCCATGTCCTCAAGGCATCACTTCCTAA...AGGGGTCATCCTTGCCCATCGGGACCAGAAACCTGGGAGAGACTTGGATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp AGCTTCCTTAGGCAGGGAGGGATGATGAACCCTCATCCTTTACCTCCTTCTCCAGACCCCAGCTCTTCCTaGTGCCGGGCAAAGATGCCT +
Preference number: 5 (lower is better)
Translates to: SFLRQGGMMNPHPLPPSPDPSSS*CRAKMP
Trigger: AGGCATCTTTGCCCGGCACAAGGAAGAGCTGGGGTC...TGGAGAAGGAGGTAAAGGATGAGGGTTCATCATCCCTCCCTGCCTAAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp ACATCTGGGGTCTTCAGGCACCAGCCATGCCTGCCGAGGAGTGCTGTCAGGACATTGAATCGAGGACTCTaGTTTGAGATGTTGTGCGGG +
Preference number: 5 (lower is better)
Translates to: TSGVFRHQPCLPRSAVRTLNRGL*FEMLCG
Trigger: CCCGCACAACATCTCAAACAAGAGTCCTCGATTCAA...TGTCCTGACAGCACTCCTCGGCAGGCATGGCTGGTGCCTGAAGACCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS CCA 90 bp AAGAGCACGTGCTTCTTTGTCTCACGGGTCAGGCTGAACTCGTACTaGATGGGTGAACTGCTGGTATTCTCATGGCGGCAGTCCAGACGA +
Preference number: 5 (lower is better)
Translates to: KSTCFFVSRVRLNSY*MGELLVFSWRQSRR
Trigger: TCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000580275.5
ENST00000584021.1
CDS CCA 90 bp TGGGATCTCAGTCCTGGATCTGATGCATTCCAGACACACTGGCTCTaGCTTCTGTCTGCCTCTTCATGGCAGCGCACTCCTTCCTGCTTA +
Preference number: 5 (lower is better)
Translates to: WDLSPGSDAFQTHWL*LLSASSWQRTPSCL
Trigger: TAAGCAGGAAGGAGTGCGCTGCCATGAAGAGGCAGACAGAAGCCAGAGCCAGTGTGTCTGGAATGCATCAGATCCAGGACTGAGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524659.1
CDS CCA 90 bp ATGCTGATGGCCAGGTTCATGGTTCTGGGATCTCAGTCCTGGATCTaGGGTGGGAACAGGATGGGAATCAGCCAAGCTGTGCCACACTTA +
Preference number: 5 (lower is better)
Translates to: MLMARFMVLGSQSWI*GGNRMGISQAVPHL
Trigger: TAAGTGTGGCACAGCTTGGCTGATTCCCATCCTGTTCCCACCCCAGATCCAGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS-3UTR CAA 90 bp GGTGAGGTGGCCGCGTGGACGTGGGTAGATAATCGCATGCAGCACTGGAACTCCACCTTCATGTTGTATTaGCTGGTGAAGTTGGTTCGG +
Preference number: 5 (lower is better)
Translates to: GEVAAWTWVDNRMQHWNSTFMLY*LVKLVR
Trigger: CCGAACCAACTTCACCAGCAAATACAACATGAAGGT...GGAGTTCCAGTGCTGCATGCGATTATCTACCCACGTCCACGCGGCCACCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CAA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCTCTCTGCACTGGAACTaGAGGCTTCCTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGSLHWN*RLPVSS
Trigger: GGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGA...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284240.10
ENST00000528295.5
ENST00000528522.5
CDS-3UTR CAA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCGTAGGCCACAAATTCTaGGTGGTGCCCTCACATCTG +
Preference number: 5 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGVGHKF*VVPSHL
Trigger: CAGATGTGAGGGCACCACCAAGAATTTGTGGCCTAC...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284240.10
ENST00000528522.5
CDS-3UTR CAA 90 bp TGGGTCTCACTCCATGGCTTGCCTCAGGCCCCGCAGAAGTCCCTGAGAAGGCAGACAGATTCCAGAGGCTaGGTTTTATTGTGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: WVSLHGLPQAPQKSLRRQTDSRG*VLLCSF
Trigger: AAAACTGCACAATAAAACCAAGCCTCTGGAATCTGT...CTGCCTTCTCAGGGACTTCTGCGGGGCCTGAGGCAAGCCATGGAGTGAGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS GCA 90 bp TATGGCAGTCATCTAAGTCCCTCTCTCCATTCCCCCTCTCGTCCCTaGATCTCACTGAACATGATACTGCCACTGGCTCTTTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YGSHLSPSLHSPSRP*ISLNMILPLALSCS
Trigger: TGAGCAGGAAAGAGCCAGTGGCAGTATCATGTTCAGTGAGATGCAGGGACGAGAGGGGGAATGGAGAGAGGGACTTAGATGACTGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS-3UTR CAA 90 bp ATTCACGCAAAGCCACTTGTGCATTCCAGAGCCAGGGCCATGTGGTTCGGCCCAACCTTCATGTTGTATTaGCTGGTGAAGTTGGTTCGG +
Preference number: 5 (lower is better)
Translates to: IHAKPLVHSRARAMWFGPTFMLY*LVKLVR
Trigger: CCGAACCAACTTCACCAGCAAATACAACATGAAGGT...TGGGCCGAACCACATGGCCCTGGCTCTGGAATGCACAAGTGGCTTTGCGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CAGCACCCTTCTAAGAGTGTGGCTGCTAAACTCTTCAGGGACATAGTACTAGAGCATCTTGCTAAGGGGTaGTCAGCCTCCCAACCTGGG +
Preference number: 5 (lower is better)
Translates to: QHPSKSVAAKLFRDIVLEHLAKG*SASQPG
Trigger: CCCAGGTTGGGAGGCTGACAACCCCTTAGCAAGATG...CTCTAGTACTATGTCCCTGAAGAGTTTAGCAGCCACACTCTTAGAAGGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp ATGCTGGAGATGCTCAGTTCTCTCCCTCACAAGGTAGGCCACAAATTCTTGGTGAGAGAGGGGCTTCTGTaGCTCTTGAGCGGGAATTCC +
Preference number: 5 (lower is better)
Translates to: MLEMLSSLPHKVGHKFLVREGLL*LLSGNS
Trigger: GGAATTCCCGCTCAAGAGCAACAGAAGCCCCTCTCT...CACCAAGAATTTGTGGCCTACCTTGTGAGGGAGAGAACTGAGCATCTCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp CGTTTATTTGGGCAAATGTGTCTCGTTAGGGTCATTCTGAAAAGAAGCCCAGTGGAGCTGATGGCCCTCTaGCCTGGCCAGGACTCTCTG +
Preference number: 5 (lower is better)
Translates to: RLFGQMCLVRVILKRSPVELMAL*PGQDSL
Trigger: CAGAGAGTCCTGGCCAGGCAAGAGGGCCATCAGCTC...CACTGGGCTTCTTTTCAGAATGACCCTAACGAGACACATTTGCCCAAATAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp ATTCCAGAGCCAGGGCCATGTGGTTCGGCCCACATGTTGGCAGTAAGCATGTTGAGGACATGTTTCTCCTaGAGTGTGTTGGGGACATTC +
Preference number: 5 (lower is better)
Translates to: IPEPGPCGSAHMLAVSMLRTCFS*SVLGTF
Trigger: GAATGTCCCCAACACACTCAAGGAGAAACATGTCCT...CAACATGCTTACTGCCAACATGTGGGCCGAACCACATGGCCCTGGCTCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp AGAGAAGTAGGATCTCTGCACTGGAACTTGAGGCTTCCTGTCTCCTCCATGGGCATCGAGGACTCTTGTTaGAGATGTTGTGCGGGCTTG +
Preference number: 5 (lower is better)
Translates to: REVGSLHWNLRLPVSSMGIEDSC*RCCAGL
Trigger: CAAGCCCGCACAACATCTCAAACAAGAGTCCTCGAT...GCCCATGGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGATCCTACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp CGTGTTCCTGGAGGAGAGAAAGACATAGTGATCTCCGATTGTATGTaGGCCAAGGATGCTTCCCAATGTCCAGCTCTCTGGAGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RVPGGEKDIVISDCM*AKDASQCPALWSSW
Trigger: CCAGGAACTCCAGAGAGCTGGACATTGGGAAGCATCCTTGGCTCACATACAATCGGAGATCACTATGTCTTTCTCTCCTCCAGGAACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 90 bp CAAAAACCACCTCAGGCCGTCAGAATATCAGCGCGGTGGATTGGCTaGCTTCAGGATGAAAAAGAGCCCTCTCTTTGTCACCTGCGCTTT +
Preference number: 5 (lower is better)
Translates to: QKPPQAVRISARWIG*LQDEKEPSLCHLRF
Trigger: AAAGCGCAGGTGACAAAGAGAGGGCTCTTTTTCATCCTGAAGTCAGCCAATCCACCGCGCTGATATTCTGACGGCCTGAGGTGGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000533840.1
ENST00000584021.1
CDS-3UTR CAA 90 bp ACCTTCATGTTGTATTTGCTGGTGAAGTTGGTTCGGGAGCGGTATGTGTGCTCATCTCTGCACTGGAACTaGAGGCTTCCTGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TFMLYLLVKLVRERYVCSSLHWN*RLPVSS
Trigger: GGAGGAGACAGGAAGCCTCAAGTTCCAGTGCAGAGA...TGAGCACACATACCGCTCCCGAACCAACTTCACCAGCAAATACAACATGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS-3UTR CAA 90 bp AAGACACCTTCACAGCACGAAAGCTGCAGATTCAGAGAGGGACATCAGGTTGAGGGTTCGGCCCACATGTaGGCAGTAAGCATGTTGTTC +
Preference number: 5 (lower is better)
Translates to: KTPSQHESCRFREGHQVEGSAHM*AVSMLF
Trigger: GAACAACATGCTTACTGCCAACATGTGGGCCGAACC...CTCAACCTGATGTCCCTCTCTGAATCTGCAGCTTTCGTGCTGTGAAGGTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp GAGGACCTTCATGTTGTATTTGCTGGTGAAGTTGGTTCGGGAGCGGTATGTGTGTATTTGCTGGTGAAGTaGGTTCGGGAGCGGTATGTG +
Preference number: 5 (lower is better)
Translates to: EDLHVVFAGEVGSGAVCVYLLVK*VRERYV
Trigger: CACATACCGCTCCCGAACCAACTTCACCAGCAAATA...CACACATACCGCTCCCGAACCAACTTCACCAGCAAATACAACATGAAGGTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS GCA 90 bp AGGAGAGAAAGACATAGTGATCTCCGATTGTATGTGAGCCAAGGATaGTTCCCAATGTCCAGCTCTCTGGAGTTCCTGGGACTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: RRERHSDLRLYVSQG*FPMSSSLEFLGLQF
Trigger: AAACTGCAGTCCCAGGAACTCCAGAGAGCTGGACATTGGGAAGCATCCTTGGCTCACATACAATCGGAGATCACTATGTCTTTCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS CCA 90 bp CAGTCACGGTGTGTTTCTGCGCTTGGCCATGGAGCACTTACTAGCTaGGTGACTTTAAGTAACTTTACCACTCTTTCTCCTCTTCTTACA +
Preference number: 5 (lower is better)
Translates to: QSRCVSALGHGALTS*VTLSNFTTLSPLLT
Trigger: TGTAAGAAGAGGAGAAAGAGTGGTAAAGTTACTTAAAGTCACCCAGCTAGTAAGTGCTCCATGGCCAAGCGCAGAAACACACCGTGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS-3UTR CAA 90 bp GACTTGGGTTTGTTTGTTTCACATGTAAAGACACCTTCACAGCACGAAAGCTGCGTTGCTACTAAGTGGTaGGGGAGAAGTCAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: DLGLFVSHVKTPSQHESCVATKW*GRSQGR
Trigger: TCTTCCCTGACTTCTCCCCAACCACTTAGTAGCAAC...GCAGCTTTCGTGCTGTGAAGGTGTCTTTACATGTGAAACAAACAAACCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS-3UTR CAA 90 bp ATAGTACTAGAGTGTGACAAAGACCCCATAGGAAGTGTCACACAGGTGCGAGGCGGGATGTTCGTTTATTaGGGCAAATGTGTCTCGTTA +
Preference number: 5 (lower is better)
Translates to: IVLECDKDPIGSVTQVRGGMFVY*GKCVSL
Trigger: TAACGAGACACATTTGCCCAAATAAACGAACATCCC...GCCTCGCACCTGTGTGACACTTCCTATGGGGTCTTTGTCACACTCTAGTACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284240.10
CDS TCA 90 bp AGCCCGGTCTCACAGAACCAGCCATCTTTCCCATTTGCAGATTACTaGTCTCTTGCACACATATCATCTTATGAAAACCTTACTAAACAT +
Preference number: 5 (lower is better)
Translates to: SPVSQNQPSFPFADY*SLAHISSYENLTKH
Trigger: ATGTTTAGTAAGGTTTTCATAAGATGATATGTGTGCAAGAGATCAGTAATCTGCAAATGGGAAAGATGGCTGGTTCTGTGAGACCGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 72 bp CAGAAGGGGCGTGCACCCGCGAGAGCGCGCAGGGCATaGCCTCGGTTGAGTGCGCCCGGGTGCGCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: QKGRAPARARRA*PRLSAPGCAGR
Trigger: GCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACGCCCCTTCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 72 bp GTGCACCCGCGAGAGCGCGCAGGGCATTGCCTCGGTTaGGTGCGCCCGGGTGCGCAGGGCGCACCACTAGAC +
Preference number: 6 (lower is better)
Translates to: VHPRERAGHCLG*VRPGAQGAPLD
Trigger: GTCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS CAA 72 bp CGTGCACCCGCGAGAGCGCGCAGGGCATTGCCTCGGTaGAGTGCGCCCGGGTGCGCAGGGCGCACCACTAGA +
Preference number: 6 (lower is better)
Translates to: RAPARARRALPR*SAPGCAGRTTR
Trigger: TCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS CAA 90 bp GAGAGGCCACAGAAGGGGCGTGCACCCGCGAGAGCGCGCAGGGCATaGCCTCGGTTGAGTGCGCCCGGGTGCGCAGGGCGCACCACTAGA +
Preference number: 6 (lower is better)
Translates to: ERPQKGRAPARARRA*PRLSAPGCAGRTTR
Trigger: TCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACGCCCCTTCTGTGGCCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 72 bp GCGCGCAGGGCATTGCCTCGGTTGAGTGCGCCCGGGTaGGCAGGGCGCACCACTAGACGAGTTCAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: ARRALPRLSAPG*AGRTTRRVQGP
Trigger: GGGACCCTGAACTCGTCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 72 bp TCGGGAGACCTGCAAGACTGGACTGGGGTCTTCCGCTaGTGCAGCCTCCTCCAGACGCGCCGCCGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: SGDLQDWTGVFR*CSLLQTRRRLR
Trigger: CCGGAGGCGGCGGCGCGTCTGGAGGAGGCTGCAGCAGCGGAAGACCCCAGTCCAGTCTTGCAGGTCTCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527590.5
CDS CAA 90 bp CAGAAGGGGCGTGCACCCGCGAGAGCGCGCAGGGCATTGCCTCGGTaGAGTGCGCCCGGGTGCGCAGGGCGCACCACTAGACGAGTTCAG +
Preference number: 6 (lower is better)
Translates to: QKGRAPARARRALPR*SAPGCAGRTTRRVQ
Trigger: CTGAACTCGTCTAGTGGTGCGCCCTGCGCACCCGGGCGCACTCAACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACGCCCCTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 72 bp AGCAGTGCTCGCCCAGGAGAGGCCACAGAAGGGGCGTaGACCCGCGAGAGCGCGCAGGGCATTGCCTCGGTT +
Preference number: 6 (lower is better)
Translates to: SSARPGEATEGA*TRESAQGIASV
Trigger: AACCGAGGCAATGCCCTGCGCGCTCTCGCGGGTGCACGCCCCTTCTGTGGCCTCTCCTGGGCGAGCACTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS TCA 72 bp ACTAGACGAGTTCAGGGTCCCTGGCGCTCAGCCCCTTaGCGGGTGAGGCTAGGATCCCGCGGCGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TRRVQGPWRSAP*RVRLGSRGGCS
Trigger: GCTGCAGCCGCCGCGGGATCCTAGCCTCACCCGTCAAGGGGCTGAGCGCCAGGGACCCTGAACTCGTCTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS GCA 72 bp GGAAGCCAGGGCGCCTGGAGCCCCAGTCCTGCCCCATaGCGGGTACCTGTTAGCAGGAGAGCGATGCTGATG +
Preference number: 6 (lower is better)
Translates to: GSQGAWSPSPAP*RVPVSRRAMLM
Trigger: CATCAGCATCGCTCTCCTGCTAACAGGTACCCGGCATGGGGCAGGACTGGGGCTCCAGGCGCCCTGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533840.1
ENST00000584021.1
CDS GCA 72 bp TGGCACCAGCAGTGCCTCCTTCAAACTGGAGGGGCCTaGGGCACAGGGGCCTCCCACCCACCTGTTAGCAGG +
Preference number: 6 (lower is better)
Translates to: WHQQCLLQTGGA*GTGASHPPVSR
Trigger: CCTGCTAACAGGTGGGTGGGAGGCCCCTGTGCCGCAGGCCCCTCCAGTTTGAAGGAGGCACTGCTGGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532974.1
CDS CCA 72 bp GCTGGTCACCTTCTGCCCTCGGGAGACCTGCAAGACTaGCACCAGCAGTGCCTCCTTCAAACTGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: AGHLLPSGDLQD*HQQCLLQTGGA
Trigger: GGCCCCTCCAGTTTGAAGGAGGCACTGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532974.1
ENST00000584021.1
CDS GCA 72 bp TGGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAGACTGGACTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: WSTRQAVRLVTF*PRETCKTGLGS
Trigger: AGACCCCAGTCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527590.5
CDS GCA 72 bp TGGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAGACTGGCACCAGCAGT +
Preference number: 6 (lower is better)
Translates to: WSTRQAVRLVTF*PRETCKTGTSS
Trigger: ACTGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532974.1
ENST00000584021.1
CDS CCA 72 bp GACGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGGAGACCTGCAAGACTG +
Preference number: 6 (lower is better)
Translates to: DEGSGPLGRPLG*SPSALGRPARL
Trigger: CAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528522.5
ENST00000532974.1
ENST00000584021.1
CDS CCA 72 bp GACGAAGGCTCTGGTCCACTAGGCAGGCCGTTAGGCTaGTCACCTTCTGCCCTCGGGAGACCTGTTAGCAGG +
Preference number: 6 (lower is better)
Translates to: DEGSGPLGRPLG*SPSALGRPVSR
Trigger: CCTGCTAACAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528295.5
CDS GCA 72 bp GCCGTTAGGCTGGTCACCTTCTGCCCTCGGGAGACCTaGAAGACTGGCACCAGCAGTGCCTCCTTCAAACTG +
Preference number: 6 (lower is better)
Translates to: AVRLVTFCPRET*KTGTSSASFKL
Trigger: CAGTTTGAAGGAGGCACTGCTGGTGCCAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532974.1
ENST00000584021.1
CDS CAA 72 bp TGCCTGCTGTCCCCGAGCCTGGCTCTCCCAGCTCACTaGACCTTGTTAGGGGCTTGTCTCACCTCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: CLLSPSLALPAH*TLLGACLTSEH
Trigger: GTGCTCAGAGGTGAGACAAGCCCCTAACAAGGTCAAGTGAGCTGGGAGAGCCAGGCTCGGGGACAGCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS TCA 72 bp GGGCCTCCCACCCACCTGTTAGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTCTGGGATCTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: GPPTHLLAGERC*WPGSWFWDLSP
Trigger: AGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCATCGCTCTCCTGCTAACAGGTGGGTGGGAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532974.1
CDS GCA 72 bp TGGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTCTaGCCTCGGGAGACCTGCAAGACTGTTAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: WSTRQAVRLVTF*PRETCKTVSRR
Trigger: TCTCCTGCTAACAGTCTTGCAGGTCTCCCGAGGGCAGAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000528522.5
CDS CCA 72 bp CTGGTATTCTCATGGCGGCAGTCCAGACGAAGGCTCTaGTCCACTAGGCAGGCCGTTAGGCTGGTCACCTTC +
Preference number: 6 (lower is better)
Translates to: LVFSWRQSRRRL*STRQAVRLVTF
Trigger: GAAGGTGACCAGCCTAACGGCCTGCCTAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000584021.1
CDS CAA 90 bp AACTGCCTGCTGTCCCCGAGCCTGGCTCTCCCAGCTCACTTGACCTaGTTAGGGGCTTGTCTCACCTCTGAGCACTGTGACGTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: NCLLSPSLALPAHLT*LGACLTSEHCDVLG
Trigger: TCCCAGAACGTCACAGTGCTCAGAGGTGAGACAAGCCCCTAACAAGGTCAAGTGAGCTGGGAGAGCCAGGCTCGGGGACAGCAGGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 90 bp CAAGGGAACTGCCTGCTGTCCCCGAGCCTGGCTCTCCCAGCTCACTaGACCTTGTTAGGGGCTTGTCTCACCTCTGAGCACTGTGACGTT +
Preference number: 6 (lower is better)
Translates to: QGNCLLSPSLALPAH*TLLGACLTSEHCDV
Trigger: AACGTCACAGTGCTCAGAGGTGAGACAAGCCCCTAACAAGGTCAAGTGAGCTGGGAGAGCCAGGCTCGGGGACAGCAGGCAGTTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 90 bp TCAGGACTCAGGCAGGCACAGGCCCAAAGCAAGGGTGTACTCCCTTaGGGAGGTGGGTACTGCAATGTCTTAGCTGGGACCAGGAACAGC +
Preference number: 6 (lower is better)
Translates to: SGLRQAQAQSKGVLP*GGGYCNVLAGTRNS
Trigger: GCTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGTACACCCTTGCTTTGGGCCTGTGCCTGCCTGAGTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS TCA 72 bp CCCCATGCCGGGTACCTGTTAGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTCTGGGATCTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: PHAGYLLAGERC*WPGSWFWDLSP
Trigger: AGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCATCGCTCTCCTGCTAACAGGTACCCGGCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533840.1
ENST00000584021.1
CDS CCA 72 bp ACTCCCTTTGGGAGGTGGGTACTGCAATGTCTTAGCTaGGACCAGGAACAGCCCGGTCTCACAGAACCAGCC +
Preference number: 6 (lower is better)
Translates to: TPFGRWVLQCLS*DQEQPGLTEPA
Trigger: GGCTGGTTCTGTGAGACCGGGCTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 72 bp CCGAAGGCAATGGTTCCCCAGTTGACCAGGCAGCAGTaGGGAGAGGGTGAGAGCGTTATGGGGCTATTCTCC +
Preference number: 6 (lower is better)
Translates to: PKAMVPQLTRQQ*GEGESVMGLFS
Trigger: GGAGAATAGCCCCATAACGCTCTCACCCTCTCCCAACTGCTGCCTGGTCAACTGGGGAACCATTGCCTTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS TCA 72 bp GGTTCCCCAGTTGACCAGGCAGCAGTTGGGAGAGGGTaGGAGCGTTATGGGGCTATTCTCCTCTCTAGTCCA +
Preference number: 6 (lower is better)
Translates to: GSPVDQAAVGRG*ERYGAILLSSP
Trigger: TGGACTAGAGAGGAGAATAGCCCCATAACGCTCTCACCCTCTCCCAACTGCTGCCTGGTCAACTGGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS GCA 72 bp CAAAGCAAGGGTGTACTCCCTTTGGGAGGTGGGTACTaGAATGTCTTAGCTGGGACCAGGAACAGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: QSKGVLPLGGGY*NVLAGTRNSPV
Trigger: GACCGGGCTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGTACACCCTTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 72 bp GCCAGGTTCATGGTTCTGGGATCTCAGTCCTGGATCTaGGGTGGGAACAGGATGGGAATCAGCCAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: ARFMVLGSQSWI*GGNRMGISQAV
Trigger: CACAGCTTGGCTGATTCCCATCCTGTTCCCACCCCAGATCCAGGACTGAGATCCCAGAACCATGAACCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 72 bp TTCACCCCATTCACACCGAAGGCAATGGTTCCCCAGTaGACCAGGCAGCAGTTGGGAGAGGGTGAGAGCGTT +
Preference number: 6 (lower is better)
Translates to: FTPFTPKAMVPQ*TRQQLGEGESV
Trigger: AACGCTCTCACCCTCTCCCAACTGCTGCCTGGTCAACTGGGGAACCATTGCCTTCGGTGTGAATGGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 90 bp CCATTCACACCGAAGGCAATGGTTCCCCAGTTGACCAGGCAGCAGTaGGGAGAGGGTGAGAGCGTTATGGGGCTATTCTCCTCTCTAGTC +
Preference number: 6 (lower is better)
Translates to: PFTPKAMVPQLTRQQ*GEGESVMGLFSSLV
Trigger: GACTAGAGAGGAGAATAGCCCCATAACGCTCTCACCCTCTCCCAACTGCTGCCTGGTCAACTGGGGAACCATTGCCTTCGGTGTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS TCA 72 bp GGGAGACCTGCAAGACTGTTAGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTCTGGGATCTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: GRPARLLAGERC*WPGSWFWDLSP
Trigger: AGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCATCGCTCTCCTGCTAACAGTCTTGCAGGTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000528522.5
CDS TCA 72 bp GAAGGCTCTGGTCCACTGTTAGCAGGAGAGCGATGCTaGTGGCCAGGTTCATGGTTCTGGGATCTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: EGSGPLLAGERC*WPGSWFWDLSP
Trigger: AGGACTGAGATCCCAGAACCATGAACCTGGCCATCAGCATCGCTCTCCTGCTAACAGTGGACCAGAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580275.5
CDS CCA 72 bp AACTCGTACTGGATGGGTGAACTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGGCTCTGGTCCACTAGG +
Preference number: 6 (lower is better)
Translates to: NSYWMGELLVFS*RQSRRRLWSTR
Trigger: CCTAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000584021.1
CDS CCA 72 bp GATCTCAGTCCTGGATCTGATGCATTCCAGACACACTaGCTCTGGCTTCTGTCTGCCTCTTCATGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: DLSPGSDAFQTH*LWLLSASSWQR
Trigger: GCGCTGCCATGAAGAGGCAGACAGAAGCCAGAGCCAGTGTGTCTGGAATGCATCAGATCCAGGACTGAGATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524659.1
CDS CCA 72 bp GTTCATGGTTCTGGGATCTCAGTCCTGGATCTGGGGTaGGAACAGGATGGGAATCAGCCAAGCTGTGCCACA +
Preference number: 6 (lower is better)
Translates to: VHGSGISVLDLG*EQDGNQPSCAT
Trigger: TGTGGCACAGCTTGGCTGATTCCCATCCTGTTCCCACCCCAGATCCAGGACTGAGATCCCAGAACCATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 72 bp ACAGGCCCAAAGCAAGGGTGTACTCCCTTTGGGAGGTaGGTACTGCAATGTCTTAGCTGGGACCAGGAACAG +
Preference number: 6 (lower is better)
Translates to: TGPKQGCTPFGR*VLQCLSWDQEQ
Trigger: CTGTTCCTGGTCCCAGCTAAGACATTGCAGTACCCACCTCCCAAAGGGAGTACACCCTTGCTTTGGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CCA 72 bp TGCTTCTTTGTCTCACGGGTCAGGCTGAACTCGTACTaGATGGGTGAACTGCTGGTATTCTCATGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: CFFVSRVRLNSY*MGELLVFSWRQ
Trigger: CTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000580275.5
ENST00000584021.1
CDS CCA 72 bp AACTCGTACTGGATGGGTGAACTGCTGGTATTCTCATaGCGGCAGTCCAGACGAAGGCTCTGGTCCACTGTT +
Preference number: 6 (lower is better)
Translates to: NSYWMGELLVFS*RQSRRRLWSTV
Trigger: AACAGTGGACCAGAGCCTTCGTCTGGACTGCCGCCATGAGAATACCAGCAGTTCACCCATCCAGTACGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580275.5
CDS TCA 72 bp CAAAGAGCACGTGCTTCTTTGTCTCACGGGTCAGGCTaGACTCGTACTGGATGGGTGAACTGCTGGTATTCT +
Preference number: 6 (lower is better)
Translates to: QRARASLSHGSG*TRTGWVNCWYS
Trigger: AGAATACCAGCAGTTCACCCATCCAGTACGAGTTCAGCCTGACCCGTGAGACAAAGAAGCACGTGCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000284240.10
ENST00000524659.1
ENST00000524970.5
ENST00000527590.5
ENST00000528295.5
ENST00000528522.5
ENST00000532974.1
ENST00000580275.5
ENST00000584021.1
CDS CAA 72 bp AACCACCTCAGGCCGTCAGAATATCAGCGCGGTGGATaGGCTGACTTCAGGATGAAAAAGAGCCCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: NHLRPSEYQRGG*ADFRMKKSPLF
Trigger: AAAGAGAGGGCTCTTTTTCATCCTGAAGTCAGCCAATCCACCGCGCTGATATTCTGACGGCCTGAGGTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533840.1
ENST00000584021.1
CDS TCA 72 bp CAGAATATCAGCGCGGTGGATTGGCTGACTTCAGGATaGAAAAGAGCCCTCTCTTTGTCACCTGCGCTTTTC +
Preference number: 6 (lower is better)
Translates to: QNISAVDWLTSG*KRALSLSPALF
Trigger: GAAAAGCGCAGGTGACAAAGAGAGGGCTCTTTTTCATCCTGAAGTCAGCCAATCCACCGCGCTGATATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533840.1
ENST00000584021.1
CDS GCA 72 bp AGACATAGTGATCTCCGATTGTATGTGAGCCAAGGATaGTTCCCAATGTCCAGCTCTCTGGAGTTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: RHSDLRLYVSQG*FPMSSSLEFLG
Trigger: TCCCAGGAACTCCAGAGAGCTGGACATTGGGAAGCATCCTTGGCTCACATACAATCGGAGATCACTATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS CAA 72 bp TGTTCCTGGAGGAGAGAAAGACATAGTGATCTCCGATaGTATGTGAGCCAAGGATGCTTCCCAATGTCCAGC +
Preference number: 6 (lower is better)
Translates to: CSWRRERHSDLR*YVSQGCFPMSS
Trigger: GCTGGACATTGGGAAGCATCCTTGGCTCACATACAATCGGAGATCACTATGTCTTTCTCTCCTCCAGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528522.5
CDS CCA 72 bp TGTGTTTCTGCGCTTGGCCATGGAGCACTTACTAGCTaGGTGACTTTAAGTAACTTTACCACTCTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: CVSALGHGALTS*VTLSNFTTLSP
Trigger: AGGAGAAAGAGTGGTAAAGTTACTTAAAGTCACCCAGCTAGTAAGTGCTCCATGGCCAAGCGCAGAAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS TCA 72 bp TCACAGAACCAGCCATCTTTCCCATTTGCAGATTACTaGTCTCTTGCACACATATCATCTTATGAAAACCTT +
Preference number: 6 (lower is better)
Translates to: SQNQPSFPFADY*SLAHISSYENL
Trigger: AAGGTTTTCATAAGATGATATGTGTGCAAGAGATCAGTAATCTGCAAATGGGAAAGATGGCTGGTTCTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1
CDS CAA 90 bp TCTCACAGAACCAGCCATCTTTCCCATTTGCAGATTACTGATCTCTaGCACACATATCATCTTATGAAAACCTTACTAAACATCATGACA +
Preference number: 6 (lower is better)
Translates to: SHRTSHLSHLQITDL*HTYHLMKTLLNIMT
Trigger: TGTCATGATGTTTAGTAAGGTTTTCATAAGATGATATGTGTGCAAGAGATCAGTAATCTGCAAATGGGAAAGATGGCTGGTTCTGTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584021.1